0.009757 0.005633 0.000000 0.000000 0.011266 0.000000 0.000000 0.000000 0.005880 0.00000 0.00000 0.00000 Kuglstatter, A. Hennig, M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 102.491 102.491 170.063 C14 H21 N O 219.323 4-(2-aminoethyl)-2-cyclohexylphenol non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK Bioorg.Med.Chem.Lett. BMCLE8 1127 0960-894X 18 1304 1307 10.1016/j.bmcl.2008.01.032 18226904 Tyramine fragment binding to BACE-1 2008 10.2210/pdb3buh/pdb pdb_00003buh 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100.0 1 CCD MAR CCD 165 mm SINGLE WAVELENGTH M x-ray 1 0.95 1.0 X06SA SLS 0.95 SYNCHROTRON SLS BEAMLINE X06SA 45554.008 beta-secretase 1 3.4.23.46 protease domain K246A 1 man polymer 219.323 4-(2-aminoethyl)-2-cyclohexylphenol 1 syn non-polymer 18.015 water 175 nat water BETA-SITE APP CLEAVING ENZYME 1, BETA-SITE AMYLOID PRECURSOR PROTEIN CLEAVING ENZYME 1, MEMBRANE-ASSOCIATED ASPARTIC PROTEASE 2, MEMAPSIN-2, ASPARTYL PROTEASE 2, ASP 2, ASP2 no no ETDEEPEEPGRRGSFVEMVDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLR KGVYVPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQT HVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDK SIVDSGTTNLRLPKKVFEAAVASIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQ YLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAVEGPFVTLDMEDCGY NIPQTDEST ETDEEPEEPGRRGSFVEMVDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLR KGVYVPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQT HVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDK SIVDSGTTNLRLPKKVFEAAVASIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQ YLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAVEGPFVTLDMEDCGY NIPQTDEST A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia sample 9606 Homo sapiens 562 Escherichia coli 1 2.83 56.54 VAPOR DIFFUSION, HANGING DROP 7.00 2.5M SODIUM FORMATE, 100MM HEPES, pH 7.00, VAPOR DIFFUSION, HANGING DROP, temperature 298K 298 database_2 struct_ref_seq_dif struct_site repository Initial release Version format compliance Database references Derived calculations 1 0 2008-03-11 1 1 2011-07-13 1 2 2021-11-10 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y PDBJ 2008-01-02 REL AED 4-(2-aminoethyl)-2-cyclohexylphenol HOH water LIG 1 2 AED AED 394 A HOH 1001 3 HOH HOH 1001 A HOH 1002 3 HOH HOH 1002 A HOH 1003 3 HOH HOH 1003 A HOH 1004 3 HOH HOH 1004 A HOH 1005 3 HOH HOH 1005 A HOH 1006 3 HOH HOH 1006 A HOH 1007 3 HOH HOH 1007 A HOH 1008 3 HOH HOH 1008 A HOH 1009 3 HOH HOH 1009 A HOH 1010 3 HOH HOH 1010 A HOH 1011 3 HOH HOH 1011 A HOH 1012 3 HOH HOH 1012 A HOH 1014 3 HOH HOH 1014 A HOH 1015 3 HOH HOH 1015 A HOH 1016 3 HOH HOH 1016 A HOH 1017 3 HOH HOH 1017 A HOH 1018 3 HOH HOH 1018 A HOH 1019 3 HOH HOH 1019 A HOH 1020 3 HOH HOH 1020 A HOH 1021 3 HOH HOH 1021 A HOH 1022 3 HOH HOH 1022 A HOH 1023 3 HOH HOH 1023 A HOH 1024 3 HOH HOH 1024 A HOH 1025 3 HOH HOH 1025 A HOH 1027 3 HOH HOH 1027 A HOH 1028 3 HOH HOH 1028 A HOH 1029 3 HOH HOH 1029 A HOH 1030 3 HOH HOH 1030 A HOH 1031 3 HOH HOH 1031 A HOH 1032 3 HOH HOH 1032 A HOH 1033 3 HOH HOH 1033 A HOH 1035 3 HOH HOH 1035 A HOH 1036 3 HOH HOH 1036 A HOH 1037 3 HOH HOH 1037 A HOH 1038 3 HOH HOH 1038 A HOH 1039 3 HOH HOH 1039 A HOH 1041 3 HOH HOH 1041 A HOH 1042 3 HOH HOH 1042 A HOH 1043 3 HOH HOH 1043 A HOH 1044 3 HOH HOH 1044 A HOH 1045 3 HOH HOH 1045 A HOH 1046 3 HOH HOH 1046 A HOH 1047 3 HOH HOH 1047 A HOH 1048 3 HOH HOH 1048 A HOH 1049 3 HOH HOH 1049 A HOH 1050 3 HOH HOH 1050 A HOH 1051 3 HOH HOH 1051 A HOH 1052 3 HOH HOH 1052 A HOH 1053 3 HOH HOH 1053 A HOH 1054 3 HOH HOH 1054 A HOH 1055 3 HOH HOH 1055 A HOH 1056 3 HOH HOH 1056 A HOH 1059 3 HOH HOH 1059 A HOH 1060 3 HOH HOH 1060 A HOH 1061 3 HOH HOH 1061 A HOH 1062 3 HOH HOH 1062 A HOH 1063 3 HOH HOH 1063 A HOH 1064 3 HOH HOH 1064 A HOH 1065 3 HOH HOH 1065 A HOH 1066 3 HOH HOH 1066 A HOH 1068 3 HOH HOH 1068 A HOH 1069 3 HOH HOH 1069 A HOH 1070 3 HOH HOH 1070 A HOH 1071 3 HOH HOH 1071 A HOH 1073 3 HOH HOH 1073 A HOH 1074 3 HOH HOH 1074 A HOH 1075 3 HOH HOH 1075 A HOH 1076 3 HOH HOH 1076 A HOH 1077 3 HOH HOH 1077 A HOH 1078 3 HOH HOH 1078 A HOH 1079 3 HOH HOH 1079 A HOH 1080 3 HOH HOH 1080 A HOH 1081 3 HOH HOH 1081 A HOH 1082 3 HOH HOH 1082 A HOH 1083 3 HOH HOH 1083 A HOH 1084 3 HOH HOH 1084 A HOH 1085 3 HOH HOH 1085 A HOH 1086 3 HOH HOH 1086 A HOH 1087 3 HOH HOH 1087 A HOH 1088 3 HOH HOH 1088 A HOH 1089 3 HOH HOH 1089 A HOH 1090 3 HOH HOH 1090 A HOH 1092 3 HOH HOH 1092 A HOH 1093 3 HOH HOH 1093 A HOH 1094 3 HOH HOH 1094 A HOH 1095 3 HOH HOH 1095 A HOH 1096 3 HOH HOH 1096 A HOH 1097 3 HOH HOH 1097 A HOH 1098 3 HOH HOH 1098 A HOH 1099 3 HOH HOH 1099 A HOH 1100 3 HOH HOH 1100 A HOH 1101 3 HOH HOH 1101 A HOH 1102 3 HOH HOH 1102 A HOH 1103 3 HOH HOH 1103 A HOH 1104 3 HOH HOH 1104 A HOH 1105 3 HOH HOH 1105 A HOH 1106 3 HOH HOH 1106 A HOH 1107 3 HOH HOH 1107 A HOH 1110 3 HOH HOH 1110 A HOH 1111 3 HOH HOH 1111 A HOH 1112 3 HOH HOH 1112 A HOH 1113 3 HOH HOH 1113 A HOH 1114 3 HOH HOH 1114 A HOH 1115 3 HOH HOH 1115 A HOH 1117 3 HOH HOH 1117 A HOH 1120 3 HOH HOH 1120 A HOH 1121 3 HOH HOH 1121 A HOH 1122 3 HOH HOH 1122 A HOH 1123 3 HOH HOH 1123 A HOH 1124 3 HOH HOH 1124 A HOH 1125 3 HOH HOH 1125 A HOH 1127 3 HOH HOH 1127 A HOH 1128 3 HOH HOH 1128 A HOH 1129 3 HOH HOH 1129 A HOH 1130 3 HOH HOH 1130 A HOH 1134 3 HOH HOH 1134 A HOH 1137 3 HOH HOH 1137 A HOH 1138 3 HOH HOH 1138 A HOH 1139 3 HOH HOH 1139 A HOH 1140 3 HOH HOH 1140 A HOH 1141 3 HOH HOH 1141 A HOH 1144 3 HOH HOH 1144 A HOH 1146 3 HOH HOH 1146 A HOH 1147 3 HOH HOH 1147 A HOH 1149 3 HOH HOH 1149 A HOH 1153 3 HOH HOH 1153 A HOH 1158 3 HOH HOH 1158 A HOH 1162 3 HOH HOH 1162 A HOH 2001 3 HOH HOH 2001 A HOH 2004 3 HOH HOH 2004 A HOH 2006 3 HOH HOH 2006 A HOH 2007 3 HOH HOH 2007 A HOH 2008 3 HOH HOH 2008 A HOH 2009 3 HOH HOH 2009 A HOH 2011 3 HOH HOH 2011 A HOH 2013 3 HOH HOH 2013 A HOH 2014 3 HOH HOH 2014 A HOH 2015 3 HOH HOH 2015 A HOH 2016 3 HOH HOH 2016 A HOH 2018 3 HOH HOH 2018 A HOH 2019 3 HOH HOH 2019 A HOH 2020 3 HOH HOH 2020 A HOH 2021 3 HOH HOH 2021 A HOH 2022 3 HOH HOH 2022 A HOH 2023 3 HOH HOH 2023 A HOH 2025 3 HOH HOH 2025 A HOH 2026 3 HOH HOH 2026 A HOH 2027 3 HOH HOH 2027 A HOH 2029 3 HOH HOH 2029 A HOH 2031 3 HOH HOH 2031 A HOH 2032 3 HOH HOH 2032 A HOH 2035 3 HOH HOH 2035 A HOH 2037 3 HOH HOH 2037 A HOH 2038 3 HOH HOH 2038 A HOH 2039 3 HOH HOH 2039 A HOH 2040 3 HOH HOH 2040 A HOH 2043 3 HOH HOH 2043 A HOH 2044 3 HOH HOH 2044 A HOH 2046 3 HOH HOH 2046 A HOH 2048 3 HOH HOH 2048 A HOH 2049 3 HOH HOH 2049 A HOH 2050 3 HOH HOH 2050 A HOH 2054 3 HOH HOH 2054 A HOH 2055 3 HOH HOH 2055 A HOH 2057 3 HOH HOH 2057 A HOH 2058 3 HOH HOH 2058 A HOH 2059 3 HOH HOH 2059 A HOH 2060 3 HOH HOH 2060 A HOH 2061 3 HOH HOH 2061 A HOH 2063 3 HOH HOH 2063 A HOH 2064 3 HOH HOH 2064 A HOH 2065 3 HOH HOH 2065 A HOH 2068 3 HOH HOH 2068 A HOH 2098 3 HOH HOH 2098 A HOH 2099 3 HOH HOH 2099 A n 1 -15 A n 2 -14 A n 3 -13 A n 4 -12 A n 5 -11 A n 6 -10 A n 7 -9 A n 8 -8 A n 9 -7 A n 10 -6 A n 11 -5 A ARG -4 n 12 ARG -4 A GLY -3 n 13 GLY -3 A SER -2 n 14 SER -2 A PHE -1 n 15 PHE -1 A VAL 0 n 16 VAL 0 A GLU 1 n 17 GLU 1 A MET 2 n 18 MET 2 A VAL 3 n 19 VAL 3 A ASP 4 n 20 ASP 4 A ASN 5 n 21 ASN 5 A LEU 6 n 22 LEU 6 A ARG 7 n 23 ARG 7 A GLY 8 n 24 GLY 8 A LYS 9 n 25 LYS 9 A SER 10 n 26 SER 10 A GLY 11 n 27 GLY 11 A GLN 12 n 28 GLN 12 A GLY 13 n 29 GLY 13 A TYR 14 n 30 TYR 14 A TYR 15 n 31 TYR 15 A VAL 16 n 32 VAL 16 A GLU 17 n 33 GLU 17 A MET 18 n 34 MET 18 A THR 19 n 35 THR 19 A VAL 20 n 36 VAL 20 A GLY 21 n 37 GLY 21 A SER 22 n 38 SER 22 A PRO 23 n 39 PRO 23 A PRO 24 n 40 PRO 24 A GLN 25 n 41 GLN 25 A THR 26 n 42 THR 26 A LEU 27 n 43 LEU 27 A ASN 28 n 44 ASN 28 A ILE 29 n 45 ILE 29 A LEU 30 n 46 LEU 30 A VAL 31 n 47 VAL 31 A ASP 32 n 48 ASP 32 A THR 33 n 49 THR 33 A GLY 34 n 50 GLY 34 A SER 35 n 51 SER 35 A SER 36 n 52 SER 36 A ASN 37 n 53 ASN 37 A PHE 38 n 54 PHE 38 A ALA 39 n 55 ALA 39 A VAL 40 n 56 VAL 40 A GLY 41 n 57 GLY 41 A ALA 42 n 58 ALA 42 A ALA 43 n 59 ALA 43 A PRO 44 n 60 PRO 44 A HIS 45 n 61 HIS 45 A PRO 46 n 62 PRO 46 A PHE 47 n 63 PHE 47 A LEU 48 n 64 LEU 48 A HIS 49 n 65 HIS 49 A ARG 50 n 66 ARG 50 A TYR 51 n 67 TYR 51 A TYR 52 n 68 TYR 52 A GLN 53 n 69 GLN 53 A ARG 54 n 70 ARG 54 A GLN 55 n 71 GLN 55 A LEU 56 n 72 LEU 56 A SER 57 n 73 SER 57 A SER 58 n 74 SER 58 A THR 59 n 75 THR 59 A TYR 60 n 76 TYR 60 A ARG 61 n 77 ARG 61 A ASP 62 n 78 ASP 62 A LEU 63 n 79 LEU 63 A ARG 64 n 80 ARG 64 A LYS 65 n 81 LYS 65 A GLY 66 n 82 GLY 66 A VAL 67 n 83 VAL 67 A TYR 68 n 84 TYR 68 A VAL 69 n 85 VAL 69 A PRO 70 n 86 PRO 70 A TYR 71 n 87 TYR 71 A THR 72 n 88 THR 72 A GLN 73 n 89 GLN 73 A GLY 74 n 90 GLY 74 A LYS 75 n 91 LYS 75 A TRP 76 n 92 TRP 76 A GLU 77 n 93 GLU 77 A GLY 78 n 94 GLY 78 A GLU 79 n 95 GLU 79 A LEU 80 n 96 LEU 80 A GLY 81 n 97 GLY 81 A THR 82 n 98 THR 82 A ASP 83 n 99 ASP 83 A LEU 84 n 100 LEU 84 A VAL 85 n 101 VAL 85 A SER 86 n 102 SER 86 A ILE 87 n 103 ILE 87 A PRO 88 n 104 PRO 88 A HIS 89 n 105 HIS 89 A GLY 90 n 106 GLY 90 A PRO 91 n 107 PRO 91 A ASN 92 n 108 ASN 92 A VAL 93 n 109 VAL 93 A THR 94 n 110 THR 94 A VAL 95 n 111 VAL 95 A ARG 96 n 112 ARG 96 A ALA 97 n 113 ALA 97 A ASN 98 n 114 ASN 98 A ILE 99 n 115 ILE 99 A ALA 100 n 116 ALA 100 A ALA 101 n 117 ALA 101 A ILE 102 n 118 ILE 102 A THR 103 n 119 THR 103 A GLU 104 n 120 GLU 104 A SER 105 n 121 SER 105 A ASP 106 n 122 ASP 106 A LYS 107 n 123 LYS 107 A PHE 108 n 124 PHE 108 A PHE 109 n 125 PHE 109 A ILE 110 n 126 ILE 110 A ASN 111 n 127 ASN 111 A GLY 112 n 128 GLY 112 A SER 113 n 129 SER 113 A ASN 114 n 130 ASN 114 A TRP 115 n 131 TRP 115 A GLU 116 n 132 GLU 116 A GLY 117 n 133 GLY 117 A ILE 118 n 134 ILE 118 A LEU 119 n 135 LEU 119 A GLY 120 n 136 GLY 120 A LEU 121 n 137 LEU 121 A ALA 122 n 138 ALA 122 A TYR 123 n 139 TYR 123 A ALA 124 n 140 ALA 124 A GLU 125 n 141 GLU 125 A ILE 126 n 142 ILE 126 A ALA 127 n 143 ALA 127 A ARG 128 n 144 ARG 128 A PRO 129 n 145 PRO 129 A ASP 130 n 146 ASP 130 A ASP 131 n 147 ASP 131 A SER 132 n 148 SER 132 A LEU 133 n 149 LEU 133 A GLU 134 n 150 GLU 134 A PRO 135 n 151 PRO 135 A PHE 136 n 152 PHE 136 A PHE 137 n 153 PHE 137 A ASP 138 n 154 ASP 138 A SER 139 n 155 SER 139 A LEU 140 n 156 LEU 140 A VAL 141 n 157 VAL 141 A LYS 142 n 158 LYS 142 A GLN 143 n 159 GLN 143 A THR 144 n 160 THR 144 A HIS 145 n 161 HIS 145 A VAL 146 n 162 VAL 146 A PRO 147 n 163 PRO 147 A ASN 148 n 164 ASN 148 A LEU 149 n 165 LEU 149 A PHE 150 n 166 PHE 150 A SER 151 n 167 SER 151 A LEU 152 n 168 LEU 152 A GLN 153 n 169 GLN 153 A LEU 154 n 170 LEU 154 A CYS 155 n 171 CYS 155 A GLY 156 n 172 GLY 156 A n 173 157 A n 174 158 A n 175 159 A n 176 160 A n 177 161 A n 178 162 A n 179 163 A n 180 164 A n 181 165 A n 182 166 A n 183 167 A n 184 168 A SER 169 n 185 SER 169 A VAL 170 n 186 VAL 170 A GLY 171 n 187 GLY 171 A GLY 172 n 188 GLY 172 A SER 173 n 189 SER 173 A MET 174 n 190 MET 174 A ILE 175 n 191 ILE 175 A ILE 176 n 192 ILE 176 A GLY 177 n 193 GLY 177 A GLY 178 n 194 GLY 178 A ILE 179 n 195 ILE 179 A ASP 180 n 196 ASP 180 A HIS 181 n 197 HIS 181 A SER 182 n 198 SER 182 A LEU 183 n 199 LEU 183 A TYR 184 n 200 TYR 184 A THR 185 n 201 THR 185 A GLY 186 n 202 GLY 186 A SER 187 n 203 SER 187 A LEU 188 n 204 LEU 188 A TRP 189 n 205 TRP 189 A TYR 190 n 206 TYR 190 A THR 191 n 207 THR 191 A PRO 192 n 208 PRO 192 A ILE 193 n 209 ILE 193 A ARG 194 n 210 ARG 194 A ARG 195 n 211 ARG 195 A GLU 196 n 212 GLU 196 A TRP 197 n 213 TRP 197 A TYR 198 n 214 TYR 198 A TYR 199 n 215 TYR 199 A GLU 200 n 216 GLU 200 A VAL 201 n 217 VAL 201 A ILE 202 n 218 ILE 202 A ILE 203 n 219 ILE 203 A VAL 204 n 220 VAL 204 A ARG 205 n 221 ARG 205 A VAL 206 n 222 VAL 206 A GLU 207 n 223 GLU 207 A ILE 208 n 224 ILE 208 A ASN 209 n 225 ASN 209 A GLY 210 n 226 GLY 210 A GLN 211 n 227 GLN 211 A ASP 212 n 228 ASP 212 A LEU 213 n 229 LEU 213 A LYS 214 n 230 LYS 214 A MET 215 n 231 MET 215 A ASP 216 n 232 ASP 216 A CYS 217 n 233 CYS 217 A LYS 218 n 234 LYS 218 A GLU 219 n 235 GLU 219 A TYR 220 n 236 TYR 220 A ASN 221 n 237 ASN 221 A TYR 222 n 238 TYR 222 A ASP 223 n 239 ASP 223 A LYS 224 n 240 LYS 224 A SER 225 n 241 SER 225 A ILE 226 n 242 ILE 226 A VAL 227 n 243 VAL 227 A ASP 228 n 244 ASP 228 A SER 229 n 245 SER 229 A GLY 230 n 246 GLY 230 A THR 231 n 247 THR 231 A THR 232 n 248 THR 232 A ASN 233 n 249 ASN 233 A LEU 234 n 250 LEU 234 A ARG 235 n 251 ARG 235 A LEU 236 n 252 LEU 236 A PRO 237 n 253 PRO 237 A LYS 238 n 254 LYS 238 A LYS 239 n 255 LYS 239 A VAL 240 n 256 VAL 240 A PHE 241 n 257 PHE 241 A GLU 242 n 258 GLU 242 A ALA 243 n 259 ALA 243 A ALA 244 n 260 ALA 244 A VAL 245 n 261 VAL 245 A ALA 246 n 262 ALA 246 A SER 247 n 263 SER 247 A ILE 248 n 264 ILE 248 A LYS 249 n 265 LYS 249 A ALA 250 n 266 ALA 250 A ALA 251 n 267 ALA 251 A SER 252 n 268 SER 252 A SER 253 n 269 SER 253 A THR 254 n 270 THR 254 A GLU 255 n 271 GLU 255 A n 272 256 A PHE 257 n 273 PHE 257 A PRO 258 n 274 PRO 258 A ASP 259 n 275 ASP 259 A GLY 260 n 276 GLY 260 A PHE 261 n 277 PHE 261 A TRP 262 n 278 TRP 262 A LEU 263 n 279 LEU 263 A GLY 264 n 280 GLY 264 A GLU 265 n 281 GLU 265 A GLN 266 n 282 GLN 266 A LEU 267 n 283 LEU 267 A VAL 268 n 284 VAL 268 A CYS 269 n 285 CYS 269 A TRP 270 n 286 TRP 270 A GLN 271 n 287 GLN 271 A ALA 272 n 288 ALA 272 A GLY 273 n 289 GLY 273 A THR 274 n 290 THR 274 A THR 275 n 291 THR 275 A PRO 276 n 292 PRO 276 A TRP 277 n 293 TRP 277 A ASN 278 n 294 ASN 278 A ILE 279 n 295 ILE 279 A PHE 280 n 296 PHE 280 A PRO 281 n 297 PRO 281 A VAL 282 n 298 VAL 282 A ILE 283 n 299 ILE 283 A SER 284 n 300 SER 284 A LEU 285 n 301 LEU 285 A TYR 286 n 302 TYR 286 A LEU 287 n 303 LEU 287 A MET 288 n 304 MET 288 A GLY 289 n 305 GLY 289 A GLU 290 n 306 GLU 290 A VAL 291 n 307 VAL 291 A THR 292 n 308 THR 292 A ASN 293 n 309 ASN 293 A GLN 294 n 310 GLN 294 A SER 295 n 311 SER 295 A PHE 296 n 312 PHE 296 A ARG 297 n 313 ARG 297 A ILE 298 n 314 ILE 298 A THR 299 n 315 THR 299 A ILE 300 n 316 ILE 300 A LEU 301 n 317 LEU 301 A PRO 302 n 318 PRO 302 A GLN 303 n 319 GLN 303 A GLN 304 n 320 GLN 304 A TYR 305 n 321 TYR 305 A LEU 306 n 322 LEU 306 A ARG 307 n 323 ARG 307 A PRO 308 n 324 PRO 308 A VAL 309 n 325 VAL 309 A n 326 310 A n 327 311 A n 328 312 A n 329 313 A n 330 314 A n 331 315 A n 332 316 A n 333 317 A ASP 318 n 334 ASP 318 A CYS 319 n 335 CYS 319 A TYR 320 n 336 TYR 320 A LYS 321 n 337 LYS 321 A PHE 322 n 338 PHE 322 A ALA 323 n 339 ALA 323 A ILE 324 n 340 ILE 324 A SER 325 n 341 SER 325 A GLN 326 n 342 GLN 326 A SER 327 n 343 SER 327 A SER 328 n 344 SER 328 A THR 329 n 345 THR 329 A GLY 330 n 346 GLY 330 A THR 331 n 347 THR 331 A VAL 332 n 348 VAL 332 A MET 333 n 349 MET 333 A GLY 334 n 350 GLY 334 A ALA 335 n 351 ALA 335 A VAL 336 n 352 VAL 336 A ILE 337 n 353 ILE 337 A MET 338 n 354 MET 338 A GLU 339 n 355 GLU 339 A GLY 340 n 356 GLY 340 A PHE 341 n 357 PHE 341 A TYR 342 n 358 TYR 342 A VAL 343 n 359 VAL 343 A VAL 344 n 360 VAL 344 A PHE 345 n 361 PHE 345 A ASP 346 n 362 ASP 346 A ARG 347 n 363 ARG 347 A ALA 348 n 364 ALA 348 A ARG 349 n 365 ARG 349 A LYS 350 n 366 LYS 350 A ARG 351 n 367 ARG 351 A ILE 352 n 368 ILE 352 A GLY 353 n 369 GLY 353 A PHE 354 n 370 PHE 354 A ALA 355 n 371 ALA 355 A VAL 356 n 372 VAL 356 A SER 357 n 373 SER 357 A ALA 358 n 374 ALA 358 A CYS 359 n 375 CYS 359 A HIS 360 n 376 HIS 360 A VAL 361 n 377 VAL 361 A HIS 362 n 378 HIS 362 A ASP 363 n 379 ASP 363 A GLU 364 n 380 GLU 364 A PHE 365 n 381 PHE 365 A ARG 366 n 382 ARG 366 A THR 367 n 383 THR 367 A ALA 368 n 384 ALA 368 A ALA 369 n 385 ALA 369 A VAL 370 n 386 VAL 370 A GLU 371 n 387 GLU 371 A GLY 372 n 388 GLY 372 A PRO 373 n 389 PRO 373 A PHE 374 n 390 PHE 374 A VAL 375 n 391 VAL 375 A THR 376 n 392 THR 376 A LEU 377 n 393 LEU 377 A ASP 378 n 394 ASP 378 A MET 379 n 395 MET 379 A GLU 380 n 396 GLU 380 A ASP 381 n 397 ASP 381 A CYS 382 n 398 CYS 382 A GLY 383 n 399 GLY 383 A TYR 384 n 400 TYR 384 A ASN 385 n 401 ASN 385 A ILE 386 n 402 ILE 386 A n 403 387 A n 404 388 A n 405 389 A n 406 390 A n 407 391 A n 408 392 A n 409 393 A author_and_software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N VAL 69 A N VAL 85 A O TRP 76 A O TRP 92 A O SER 86 A O SER 102 A N THR 19 A N THR 35 A O TYR 15 A O TYR 31 A N ARG 7 A N ARG 23 A N LEU 6 A N LEU 22 A O GLY 172 A O GLY 188 A O SER 173 A O SER 189 A N GLN 153 A N GLN 169 A N PHE 150 A N PHE 166 A O PHE 345 A O PHE 361 A N TYR 342 A N TYR 358 A O ALA 355 A O ALA 371 A O ILE 352 A O ILE 368 A N THR 191 A N THR 207 A N VAL 69 A N VAL 85 A O TRP 76 A O TRP 92 A N VAL 85 A N VAL 101 A O VAL 95 A O VAL 111 A O ILE 102 A O ILE 118 A N VAL 40 A N VAL 56 A N ALA 39 A N ALA 55 A O ILE 118 A O ILE 134 A O LEU 119 A O LEU 135 A N LEU 30 A N LEU 46 A O ILE 29 A O ILE 45 A N VAL 16 A N VAL 32 A O TYR 15 A O TYR 31 A N ARG 7 A N ARG 23 A N LEU 6 A N LEU 22 A O GLY 172 A O GLY 188 A O SER 173 A O SER 189 A N GLN 153 A N GLN 169 A N PHE 150 A N PHE 166 A O PHE 345 A O PHE 361 A N TYR 342 A N TYR 358 A O ALA 355 A O ALA 371 A O ILE 352 A O ILE 368 A N THR 191 A N THR 207 A O GLN 211 A O GLN 227 A N ILE 208 A N ILE 224 A N ARG 205 A N ARG 221 A O TYR 286 A O TYR 302 A N LEU 285 A N LEU 301 A O ILE 298 A O ILE 314 A N ARG 297 A N ARG 313 A O GLU 371 A O GLU 387 A N ILE 226 A N ILE 242 A O MET 333 A O MET 349 A O VAL 332 A O VAL 348 A N ARG 235 A N ARG 251 A N LEU 236 A N LEU 252 A O SER 325 A O SER 341 A N VAL 268 A N VAL 284 A O TYR 320 A O TYR 336 A O LYS 321 A O LYS 337 A N ARG 307 A N ARG 323 1 A GLU -15 A GLU 1 1 Y 1 A THR -14 A THR 2 1 Y 1 A ASP -13 A ASP 3 1 Y 1 A GLU -12 A GLU 4 1 Y 1 A GLU -11 A GLU 5 1 Y 1 A PRO -10 A PRO 6 1 Y 1 A GLU -9 A GLU 7 1 Y 1 A GLU -8 A GLU 8 1 Y 1 A PRO -7 A PRO 9 1 Y 1 A GLY -6 A GLY 10 1 Y 1 A ARG -5 A ARG 11 1 Y 1 A ALA 157 A ALA 173 1 Y 1 A GLY 158 A GLY 174 1 Y 1 A PHE 159 A PHE 175 1 Y 1 A PRO 160 A PRO 176 1 Y 1 A LEU 161 A LEU 177 1 Y 1 A ASN 162 A ASN 178 1 Y 1 A GLN 163 A GLN 179 1 Y 1 A SER 164 A SER 180 1 Y 1 A GLU 165 A GLU 181 1 Y 1 A VAL 166 A VAL 182 1 Y 1 A LEU 167 A LEU 183 1 Y 1 A ALA 168 A ALA 184 1 Y 1 A LYS 256 A LYS 272 1 Y 1 A GLU 310 A GLU 326 1 Y 1 A ASP 311 A ASP 327 1 Y 1 A VAL 312 A VAL 328 1 Y 1 A ALA 313 A ALA 329 1 Y 1 A THR 314 A THR 330 1 Y 1 A SER 315 A SER 331 1 Y 1 A GLN 316 A GLN 332 1 Y 1 A ASP 317 A ASP 333 1 Y 1 A PRO 387 A PRO 403 1 Y 1 A GLN 388 A GLN 404 1 Y 1 A THR 389 A THR 405 1 Y 1 A ASP 390 A ASP 406 1 Y 1 A GLU 391 A GLU 407 1 Y 1 A SER 392 A SER 408 1 Y 1 A THR 393 A THR 409 1 Y 1 A A O O ARG HOH -4 2063 2.17 1 5.43 0.90 118.30 123.73 A A A CB CG OD2 ASP ASP ASP 4 4 4 N 1 5.60 0.90 118.30 123.90 A A A CB CG OD2 ASP ASP ASP 180 180 180 N 1 5.44 0.90 118.30 123.74 A A A CB CG OD2 ASP ASP ASP 318 318 318 N 1 A GLN 73 -78.25 -77.32 1 A HIS 89 -96.85 41.26 1 A TRP 197 -136.32 -80.89 1 A ASP 223 89.19 -78.35 1 A ASP 363 -108.64 -168.48 32.338 -0.02000 -0.01000 0.00000 -0.02000 0.00000 0.03000 0.23784 0.19937 0.20134 2.30 48.80 1212 22469 5.1 97.99 RANDOM 1 THROUGHOUT FOURIER SYNTHESIS 2.30 48.80 175 3103 16 0 2912 0.008 1.058 0.271 0.218 2.36 83 1618 2.300 50.000 3BUH 24169 0.103 1 27.1000 98.6 2.30 2.38 4.200 0.439 98.6 refinement REFMAC data reduction DENZO data scaling SCALEPACK BACE-1 complexed with compound 4 1 N N 2 N N 3 N N A GLN 53 A GLN 69 HELX_P A SER 57 A SER 73 5 1 5 A TYR 123 A TYR 139 HELX_P A ALA 127 A ALA 143 5 2 5 A PRO 135 A PRO 151 HELX_P A THR 144 A THR 160 1 3 10 A ASP 180 A ASP 196 HELX_P A SER 182 A SER 198 5 4 3 A ASP 216 A ASP 232 HELX_P A TYR 222 A TYR 238 5 5 7 A LYS 238 A LYS 254 HELX_P A SER 252 A SER 268 1 6 15 A PRO 258 A PRO 274 HELX_P A LEU 263 A LEU 279 1 7 6 A LEU 301 A LEU 317 HELX_P A TYR 305 A TYR 321 1 8 5 A GLY 334 A GLY 350 HELX_P A GLU 339 A GLU 355 1 9 6 A ARG 347 A ARG 363 HELX_P A ARG 349 A ARG 365 5 10 3 A ASP 378 A ASP 394 HELX_P A GLY 383 A GLY 399 5 11 6 disulf 2.065 A CYS 155 A SG CYS 171 1_555 A CYS 359 A SG CYS 375 1_555 disulf 2.034 A CYS 217 A SG CYS 233 1_555 A CYS 382 A SG CYS 398 1_555 disulf 2.038 A CYS 269 A SG CYS 285 1_555 A CYS 319 A SG CYS 335 1_555 HYDROLASE ALZHEIMER'S DISEASE, ASPARTIC PROTEASE, BETA-SECRETASE, MEMAPSIN 2, FRAGMENT SCREEN, ALTERNATIVE SPLICING, ASPARTYL PROTEASE, GLYCOPROTEIN, HYDROLASE, MEMBRANE, TRANSMEMBRANE, ZYMOGEN A SER 22 A SER 38 1 A PRO 23 A PRO 39 0.05 A ARG 128 A ARG 144 1 A PRO 129 A PRO 145 -0.06 A GLY 372 A GLY 388 1 A PRO 373 A PRO 389 -4.59 BACE1_HUMAN UNP 1 46 P56817 ETDEEPEEPGRRGSFVEMVDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLR KGVYVPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQT HVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDK SIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQ YLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAVEGPFVTLDMEDCGY NIPQTDEST 46 454 3BUH -15 393 P56817 A 1 1 409 1 LYS engineered mutation ALA 246 3BUH A P56817 UNP 307 262 9 13 5 4 3 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel parallel anti-parallel anti-parallel A ARG 61 A ARG 77 A PRO 70 A PRO 86 A LYS 75 A LYS 91 A SER 86 A SER 102 A TYR 14 A TYR 30 A VAL 20 A VAL 36 A LEU 6 A LEU 22 A GLY 8 A GLY 24 A VAL 170 A VAL 186 A ILE 176 A ILE 192 A PHE 150 A PHE 166 A CYS 155 A CYS 171 A PHE 341 A PHE 357 A ASP 346 A ASP 362 A ARG 351 A ARG 367 A SER 357 A SER 373 A TYR 184 A TYR 200 A PRO 192 A PRO 208 A ARG 61 A ARG 77 A PRO 70 A PRO 86 A LYS 75 A LYS 91 A SER 86 A SER 102 A VAL 95 A VAL 111 A ASP 106 A ASP 122 A PHE 38 A PHE 54 A GLY 41 A GLY 57 A GLY 117 A GLY 133 A GLY 120 A GLY 136 A GLN 25 A GLN 41 A ASP 32 A ASP 48 A TYR 14 A TYR 30 A VAL 20 A VAL 36 A LEU 6 A LEU 22 A GLY 8 A GLY 24 A VAL 170 A VAL 186 A ILE 176 A ILE 192 A PHE 150 A PHE 166 A CYS 155 A CYS 171 A PHE 341 A PHE 357 A ASP 346 A ASP 362 A ARG 351 A ARG 367 A SER 357 A SER 373 A TYR 184 A TYR 200 A PRO 192 A PRO 208 A GLN 211 A GLN 227 A ASP 212 A ASP 228 A ILE 203 A ILE 219 A ILE 208 A ILE 224 A ILE 283 A ILE 299 A MET 288 A MET 304 A GLN 294 A GLN 310 A ILE 300 A ILE 316 A ALA 369 A ALA 385 A VAL 375 A VAL 391 A SER 225 A SER 241 A VAL 227 A VAL 243 A THR 331 A THR 347 A MET 333 A MET 349 A LEU 234 A LEU 250 A PRO 237 A PRO 253 A ILE 324 A ILE 340 A SER 327 A SER 343 A VAL 268 A VAL 284 A CYS 269 A CYS 285 A CYS 319 A CYS 335 A PHE 322 A PHE 338 A LEU 306 A LEU 322 A PRO 308 A PRO 324 BINDING SITE FOR RESIDUE AED A 394 A AED 394 Software 9 A GLY 11 A GLY 27 9 1_555 A GLN 12 A GLN 28 9 1_555 A GLY 13 A GLY 29 9 1_555 A ASP 32 A ASP 48 9 1_555 A LYS 107 A LYS 123 9 1_555 A PHE 108 A PHE 124 9 1_555 A THR 232 A THR 248 9 1_555 A HOH 1046 C HOH 9 1_555 A HOH 2026 C HOH 9 1_555 178 P 61 2 2