0.009757
0.005633
0.000000
0.000000
0.011266
0.000000
0.000000
0.000000
0.005880
0.00000
0.00000
0.00000
Kuglstatter, A.
Hennig, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
102.491
102.491
170.063
C14 H21 N O
219.323
4-(2-aminoethyl)-2-cyclohexylphenol
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
Bioorg.Med.Chem.Lett.
BMCLE8
1127
0960-894X
18
1304
1307
10.1016/j.bmcl.2008.01.032
18226904
Tyramine fragment binding to BACE-1
2008
10.2210/pdb3buh/pdb
pdb_00003buh
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.0
1
CCD
MAR CCD 165 mm
SINGLE WAVELENGTH
M
x-ray
1
0.95
1.0
X06SA
SLS
0.95
SYNCHROTRON
SLS BEAMLINE X06SA
45554.008
beta-secretase 1
3.4.23.46
protease domain
K246A
1
man
polymer
219.323
4-(2-aminoethyl)-2-cyclohexylphenol
1
syn
non-polymer
18.015
water
175
nat
water
BETA-SITE APP CLEAVING ENZYME 1, BETA-SITE AMYLOID PRECURSOR PROTEIN CLEAVING ENZYME 1, MEMBRANE-ASSOCIATED ASPARTIC PROTEASE 2, MEMAPSIN-2, ASPARTYL PROTEASE 2, ASP 2, ASP2
no
no
ETDEEPEEPGRRGSFVEMVDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLR
KGVYVPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQT
HVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDK
SIVDSGTTNLRLPKKVFEAAVASIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQ
YLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAVEGPFVTLDMEDCGY
NIPQTDEST
ETDEEPEEPGRRGSFVEMVDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLR
KGVYVPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQT
HVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDK
SIVDSGTTNLRLPKKVFEAAVASIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQ
YLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAVEGPFVTLDMEDCGY
NIPQTDEST
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
sample
9606
Homo sapiens
562
Escherichia coli
1
2.83
56.54
VAPOR DIFFUSION, HANGING DROP
7.00
2.5M SODIUM FORMATE, 100MM HEPES, pH 7.00, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
database_2
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Database references
Derived calculations
1
0
2008-03-11
1
1
2011-07-13
1
2
2021-11-10
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
PDBJ
2008-01-02
REL
AED
4-(2-aminoethyl)-2-cyclohexylphenol
HOH
water
LIG
1
2
AED
AED
394
A
HOH
1001
3
HOH
HOH
1001
A
HOH
1002
3
HOH
HOH
1002
A
HOH
1003
3
HOH
HOH
1003
A
HOH
1004
3
HOH
HOH
1004
A
HOH
1005
3
HOH
HOH
1005
A
HOH
1006
3
HOH
HOH
1006
A
HOH
1007
3
HOH
HOH
1007
A
HOH
1008
3
HOH
HOH
1008
A
HOH
1009
3
HOH
HOH
1009
A
HOH
1010
3
HOH
HOH
1010
A
HOH
1011
3
HOH
HOH
1011
A
HOH
1012
3
HOH
HOH
1012
A
HOH
1014
3
HOH
HOH
1014
A
HOH
1015
3
HOH
HOH
1015
A
HOH
1016
3
HOH
HOH
1016
A
HOH
1017
3
HOH
HOH
1017
A
HOH
1018
3
HOH
HOH
1018
A
HOH
1019
3
HOH
HOH
1019
A
HOH
1020
3
HOH
HOH
1020
A
HOH
1021
3
HOH
HOH
1021
A
HOH
1022
3
HOH
HOH
1022
A
HOH
1023
3
HOH
HOH
1023
A
HOH
1024
3
HOH
HOH
1024
A
HOH
1025
3
HOH
HOH
1025
A
HOH
1027
3
HOH
HOH
1027
A
HOH
1028
3
HOH
HOH
1028
A
HOH
1029
3
HOH
HOH
1029
A
HOH
1030
3
HOH
HOH
1030
A
HOH
1031
3
HOH
HOH
1031
A
HOH
1032
3
HOH
HOH
1032
A
HOH
1033
3
HOH
HOH
1033
A
HOH
1035
3
HOH
HOH
1035
A
HOH
1036
3
HOH
HOH
1036
A
HOH
1037
3
HOH
HOH
1037
A
HOH
1038
3
HOH
HOH
1038
A
HOH
1039
3
HOH
HOH
1039
A
HOH
1041
3
HOH
HOH
1041
A
HOH
1042
3
HOH
HOH
1042
A
HOH
1043
3
HOH
HOH
1043
A
HOH
1044
3
HOH
HOH
1044
A
HOH
1045
3
HOH
HOH
1045
A
HOH
1046
3
HOH
HOH
1046
A
HOH
1047
3
HOH
HOH
1047
A
HOH
1048
3
HOH
HOH
1048
A
HOH
1049
3
HOH
HOH
1049
A
HOH
1050
3
HOH
HOH
1050
A
HOH
1051
3
HOH
HOH
1051
A
HOH
1052
3
HOH
HOH
1052
A
HOH
1053
3
HOH
HOH
1053
A
HOH
1054
3
HOH
HOH
1054
A
HOH
1055
3
HOH
HOH
1055
A
HOH
1056
3
HOH
HOH
1056
A
HOH
1059
3
HOH
HOH
1059
A
HOH
1060
3
HOH
HOH
1060
A
HOH
1061
3
HOH
HOH
1061
A
HOH
1062
3
HOH
HOH
1062
A
HOH
1063
3
HOH
HOH
1063
A
HOH
1064
3
HOH
HOH
1064
A
HOH
1065
3
HOH
HOH
1065
A
HOH
1066
3
HOH
HOH
1066
A
HOH
1068
3
HOH
HOH
1068
A
HOH
1069
3
HOH
HOH
1069
A
HOH
1070
3
HOH
HOH
1070
A
HOH
1071
3
HOH
HOH
1071
A
HOH
1073
3
HOH
HOH
1073
A
HOH
1074
3
HOH
HOH
1074
A
HOH
1075
3
HOH
HOH
1075
A
HOH
1076
3
HOH
HOH
1076
A
HOH
1077
3
HOH
HOH
1077
A
HOH
1078
3
HOH
HOH
1078
A
HOH
1079
3
HOH
HOH
1079
A
HOH
1080
3
HOH
HOH
1080
A
HOH
1081
3
HOH
HOH
1081
A
HOH
1082
3
HOH
HOH
1082
A
HOH
1083
3
HOH
HOH
1083
A
HOH
1084
3
HOH
HOH
1084
A
HOH
1085
3
HOH
HOH
1085
A
HOH
1086
3
HOH
HOH
1086
A
HOH
1087
3
HOH
HOH
1087
A
HOH
1088
3
HOH
HOH
1088
A
HOH
1089
3
HOH
HOH
1089
A
HOH
1090
3
HOH
HOH
1090
A
HOH
1092
3
HOH
HOH
1092
A
HOH
1093
3
HOH
HOH
1093
A
HOH
1094
3
HOH
HOH
1094
A
HOH
1095
3
HOH
HOH
1095
A
HOH
1096
3
HOH
HOH
1096
A
HOH
1097
3
HOH
HOH
1097
A
HOH
1098
3
HOH
HOH
1098
A
HOH
1099
3
HOH
HOH
1099
A
HOH
1100
3
HOH
HOH
1100
A
HOH
1101
3
HOH
HOH
1101
A
HOH
1102
3
HOH
HOH
1102
A
HOH
1103
3
HOH
HOH
1103
A
HOH
1104
3
HOH
HOH
1104
A
HOH
1105
3
HOH
HOH
1105
A
HOH
1106
3
HOH
HOH
1106
A
HOH
1107
3
HOH
HOH
1107
A
HOH
1110
3
HOH
HOH
1110
A
HOH
1111
3
HOH
HOH
1111
A
HOH
1112
3
HOH
HOH
1112
A
HOH
1113
3
HOH
HOH
1113
A
HOH
1114
3
HOH
HOH
1114
A
HOH
1115
3
HOH
HOH
1115
A
HOH
1117
3
HOH
HOH
1117
A
HOH
1120
3
HOH
HOH
1120
A
HOH
1121
3
HOH
HOH
1121
A
HOH
1122
3
HOH
HOH
1122
A
HOH
1123
3
HOH
HOH
1123
A
HOH
1124
3
HOH
HOH
1124
A
HOH
1125
3
HOH
HOH
1125
A
HOH
1127
3
HOH
HOH
1127
A
HOH
1128
3
HOH
HOH
1128
A
HOH
1129
3
HOH
HOH
1129
A
HOH
1130
3
HOH
HOH
1130
A
HOH
1134
3
HOH
HOH
1134
A
HOH
1137
3
HOH
HOH
1137
A
HOH
1138
3
HOH
HOH
1138
A
HOH
1139
3
HOH
HOH
1139
A
HOH
1140
3
HOH
HOH
1140
A
HOH
1141
3
HOH
HOH
1141
A
HOH
1144
3
HOH
HOH
1144
A
HOH
1146
3
HOH
HOH
1146
A
HOH
1147
3
HOH
HOH
1147
A
HOH
1149
3
HOH
HOH
1149
A
HOH
1153
3
HOH
HOH
1153
A
HOH
1158
3
HOH
HOH
1158
A
HOH
1162
3
HOH
HOH
1162
A
HOH
2001
3
HOH
HOH
2001
A
HOH
2004
3
HOH
HOH
2004
A
HOH
2006
3
HOH
HOH
2006
A
HOH
2007
3
HOH
HOH
2007
A
HOH
2008
3
HOH
HOH
2008
A
HOH
2009
3
HOH
HOH
2009
A
HOH
2011
3
HOH
HOH
2011
A
HOH
2013
3
HOH
HOH
2013
A
HOH
2014
3
HOH
HOH
2014
A
HOH
2015
3
HOH
HOH
2015
A
HOH
2016
3
HOH
HOH
2016
A
HOH
2018
3
HOH
HOH
2018
A
HOH
2019
3
HOH
HOH
2019
A
HOH
2020
3
HOH
HOH
2020
A
HOH
2021
3
HOH
HOH
2021
A
HOH
2022
3
HOH
HOH
2022
A
HOH
2023
3
HOH
HOH
2023
A
HOH
2025
3
HOH
HOH
2025
A
HOH
2026
3
HOH
HOH
2026
A
HOH
2027
3
HOH
HOH
2027
A
HOH
2029
3
HOH
HOH
2029
A
HOH
2031
3
HOH
HOH
2031
A
HOH
2032
3
HOH
HOH
2032
A
HOH
2035
3
HOH
HOH
2035
A
HOH
2037
3
HOH
HOH
2037
A
HOH
2038
3
HOH
HOH
2038
A
HOH
2039
3
HOH
HOH
2039
A
HOH
2040
3
HOH
HOH
2040
A
HOH
2043
3
HOH
HOH
2043
A
HOH
2044
3
HOH
HOH
2044
A
HOH
2046
3
HOH
HOH
2046
A
HOH
2048
3
HOH
HOH
2048
A
HOH
2049
3
HOH
HOH
2049
A
HOH
2050
3
HOH
HOH
2050
A
HOH
2054
3
HOH
HOH
2054
A
HOH
2055
3
HOH
HOH
2055
A
HOH
2057
3
HOH
HOH
2057
A
HOH
2058
3
HOH
HOH
2058
A
HOH
2059
3
HOH
HOH
2059
A
HOH
2060
3
HOH
HOH
2060
A
HOH
2061
3
HOH
HOH
2061
A
HOH
2063
3
HOH
HOH
2063
A
HOH
2064
3
HOH
HOH
2064
A
HOH
2065
3
HOH
HOH
2065
A
HOH
2068
3
HOH
HOH
2068
A
HOH
2098
3
HOH
HOH
2098
A
HOH
2099
3
HOH
HOH
2099
A
n
1
-15
A
n
2
-14
A
n
3
-13
A
n
4
-12
A
n
5
-11
A
n
6
-10
A
n
7
-9
A
n
8
-8
A
n
9
-7
A
n
10
-6
A
n
11
-5
A
ARG
-4
n
12
ARG
-4
A
GLY
-3
n
13
GLY
-3
A
SER
-2
n
14
SER
-2
A
PHE
-1
n
15
PHE
-1
A
VAL
0
n
16
VAL
0
A
GLU
1
n
17
GLU
1
A
MET
2
n
18
MET
2
A
VAL
3
n
19
VAL
3
A
ASP
4
n
20
ASP
4
A
ASN
5
n
21
ASN
5
A
LEU
6
n
22
LEU
6
A
ARG
7
n
23
ARG
7
A
GLY
8
n
24
GLY
8
A
LYS
9
n
25
LYS
9
A
SER
10
n
26
SER
10
A
GLY
11
n
27
GLY
11
A
GLN
12
n
28
GLN
12
A
GLY
13
n
29
GLY
13
A
TYR
14
n
30
TYR
14
A
TYR
15
n
31
TYR
15
A
VAL
16
n
32
VAL
16
A
GLU
17
n
33
GLU
17
A
MET
18
n
34
MET
18
A
THR
19
n
35
THR
19
A
VAL
20
n
36
VAL
20
A
GLY
21
n
37
GLY
21
A
SER
22
n
38
SER
22
A
PRO
23
n
39
PRO
23
A
PRO
24
n
40
PRO
24
A
GLN
25
n
41
GLN
25
A
THR
26
n
42
THR
26
A
LEU
27
n
43
LEU
27
A
ASN
28
n
44
ASN
28
A
ILE
29
n
45
ILE
29
A
LEU
30
n
46
LEU
30
A
VAL
31
n
47
VAL
31
A
ASP
32
n
48
ASP
32
A
THR
33
n
49
THR
33
A
GLY
34
n
50
GLY
34
A
SER
35
n
51
SER
35
A
SER
36
n
52
SER
36
A
ASN
37
n
53
ASN
37
A
PHE
38
n
54
PHE
38
A
ALA
39
n
55
ALA
39
A
VAL
40
n
56
VAL
40
A
GLY
41
n
57
GLY
41
A
ALA
42
n
58
ALA
42
A
ALA
43
n
59
ALA
43
A
PRO
44
n
60
PRO
44
A
HIS
45
n
61
HIS
45
A
PRO
46
n
62
PRO
46
A
PHE
47
n
63
PHE
47
A
LEU
48
n
64
LEU
48
A
HIS
49
n
65
HIS
49
A
ARG
50
n
66
ARG
50
A
TYR
51
n
67
TYR
51
A
TYR
52
n
68
TYR
52
A
GLN
53
n
69
GLN
53
A
ARG
54
n
70
ARG
54
A
GLN
55
n
71
GLN
55
A
LEU
56
n
72
LEU
56
A
SER
57
n
73
SER
57
A
SER
58
n
74
SER
58
A
THR
59
n
75
THR
59
A
TYR
60
n
76
TYR
60
A
ARG
61
n
77
ARG
61
A
ASP
62
n
78
ASP
62
A
LEU
63
n
79
LEU
63
A
ARG
64
n
80
ARG
64
A
LYS
65
n
81
LYS
65
A
GLY
66
n
82
GLY
66
A
VAL
67
n
83
VAL
67
A
TYR
68
n
84
TYR
68
A
VAL
69
n
85
VAL
69
A
PRO
70
n
86
PRO
70
A
TYR
71
n
87
TYR
71
A
THR
72
n
88
THR
72
A
GLN
73
n
89
GLN
73
A
GLY
74
n
90
GLY
74
A
LYS
75
n
91
LYS
75
A
TRP
76
n
92
TRP
76
A
GLU
77
n
93
GLU
77
A
GLY
78
n
94
GLY
78
A
GLU
79
n
95
GLU
79
A
LEU
80
n
96
LEU
80
A
GLY
81
n
97
GLY
81
A
THR
82
n
98
THR
82
A
ASP
83
n
99
ASP
83
A
LEU
84
n
100
LEU
84
A
VAL
85
n
101
VAL
85
A
SER
86
n
102
SER
86
A
ILE
87
n
103
ILE
87
A
PRO
88
n
104
PRO
88
A
HIS
89
n
105
HIS
89
A
GLY
90
n
106
GLY
90
A
PRO
91
n
107
PRO
91
A
ASN
92
n
108
ASN
92
A
VAL
93
n
109
VAL
93
A
THR
94
n
110
THR
94
A
VAL
95
n
111
VAL
95
A
ARG
96
n
112
ARG
96
A
ALA
97
n
113
ALA
97
A
ASN
98
n
114
ASN
98
A
ILE
99
n
115
ILE
99
A
ALA
100
n
116
ALA
100
A
ALA
101
n
117
ALA
101
A
ILE
102
n
118
ILE
102
A
THR
103
n
119
THR
103
A
GLU
104
n
120
GLU
104
A
SER
105
n
121
SER
105
A
ASP
106
n
122
ASP
106
A
LYS
107
n
123
LYS
107
A
PHE
108
n
124
PHE
108
A
PHE
109
n
125
PHE
109
A
ILE
110
n
126
ILE
110
A
ASN
111
n
127
ASN
111
A
GLY
112
n
128
GLY
112
A
SER
113
n
129
SER
113
A
ASN
114
n
130
ASN
114
A
TRP
115
n
131
TRP
115
A
GLU
116
n
132
GLU
116
A
GLY
117
n
133
GLY
117
A
ILE
118
n
134
ILE
118
A
LEU
119
n
135
LEU
119
A
GLY
120
n
136
GLY
120
A
LEU
121
n
137
LEU
121
A
ALA
122
n
138
ALA
122
A
TYR
123
n
139
TYR
123
A
ALA
124
n
140
ALA
124
A
GLU
125
n
141
GLU
125
A
ILE
126
n
142
ILE
126
A
ALA
127
n
143
ALA
127
A
ARG
128
n
144
ARG
128
A
PRO
129
n
145
PRO
129
A
ASP
130
n
146
ASP
130
A
ASP
131
n
147
ASP
131
A
SER
132
n
148
SER
132
A
LEU
133
n
149
LEU
133
A
GLU
134
n
150
GLU
134
A
PRO
135
n
151
PRO
135
A
PHE
136
n
152
PHE
136
A
PHE
137
n
153
PHE
137
A
ASP
138
n
154
ASP
138
A
SER
139
n
155
SER
139
A
LEU
140
n
156
LEU
140
A
VAL
141
n
157
VAL
141
A
LYS
142
n
158
LYS
142
A
GLN
143
n
159
GLN
143
A
THR
144
n
160
THR
144
A
HIS
145
n
161
HIS
145
A
VAL
146
n
162
VAL
146
A
PRO
147
n
163
PRO
147
A
ASN
148
n
164
ASN
148
A
LEU
149
n
165
LEU
149
A
PHE
150
n
166
PHE
150
A
SER
151
n
167
SER
151
A
LEU
152
n
168
LEU
152
A
GLN
153
n
169
GLN
153
A
LEU
154
n
170
LEU
154
A
CYS
155
n
171
CYS
155
A
GLY
156
n
172
GLY
156
A
n
173
157
A
n
174
158
A
n
175
159
A
n
176
160
A
n
177
161
A
n
178
162
A
n
179
163
A
n
180
164
A
n
181
165
A
n
182
166
A
n
183
167
A
n
184
168
A
SER
169
n
185
SER
169
A
VAL
170
n
186
VAL
170
A
GLY
171
n
187
GLY
171
A
GLY
172
n
188
GLY
172
A
SER
173
n
189
SER
173
A
MET
174
n
190
MET
174
A
ILE
175
n
191
ILE
175
A
ILE
176
n
192
ILE
176
A
GLY
177
n
193
GLY
177
A
GLY
178
n
194
GLY
178
A
ILE
179
n
195
ILE
179
A
ASP
180
n
196
ASP
180
A
HIS
181
n
197
HIS
181
A
SER
182
n
198
SER
182
A
LEU
183
n
199
LEU
183
A
TYR
184
n
200
TYR
184
A
THR
185
n
201
THR
185
A
GLY
186
n
202
GLY
186
A
SER
187
n
203
SER
187
A
LEU
188
n
204
LEU
188
A
TRP
189
n
205
TRP
189
A
TYR
190
n
206
TYR
190
A
THR
191
n
207
THR
191
A
PRO
192
n
208
PRO
192
A
ILE
193
n
209
ILE
193
A
ARG
194
n
210
ARG
194
A
ARG
195
n
211
ARG
195
A
GLU
196
n
212
GLU
196
A
TRP
197
n
213
TRP
197
A
TYR
198
n
214
TYR
198
A
TYR
199
n
215
TYR
199
A
GLU
200
n
216
GLU
200
A
VAL
201
n
217
VAL
201
A
ILE
202
n
218
ILE
202
A
ILE
203
n
219
ILE
203
A
VAL
204
n
220
VAL
204
A
ARG
205
n
221
ARG
205
A
VAL
206
n
222
VAL
206
A
GLU
207
n
223
GLU
207
A
ILE
208
n
224
ILE
208
A
ASN
209
n
225
ASN
209
A
GLY
210
n
226
GLY
210
A
GLN
211
n
227
GLN
211
A
ASP
212
n
228
ASP
212
A
LEU
213
n
229
LEU
213
A
LYS
214
n
230
LYS
214
A
MET
215
n
231
MET
215
A
ASP
216
n
232
ASP
216
A
CYS
217
n
233
CYS
217
A
LYS
218
n
234
LYS
218
A
GLU
219
n
235
GLU
219
A
TYR
220
n
236
TYR
220
A
ASN
221
n
237
ASN
221
A
TYR
222
n
238
TYR
222
A
ASP
223
n
239
ASP
223
A
LYS
224
n
240
LYS
224
A
SER
225
n
241
SER
225
A
ILE
226
n
242
ILE
226
A
VAL
227
n
243
VAL
227
A
ASP
228
n
244
ASP
228
A
SER
229
n
245
SER
229
A
GLY
230
n
246
GLY
230
A
THR
231
n
247
THR
231
A
THR
232
n
248
THR
232
A
ASN
233
n
249
ASN
233
A
LEU
234
n
250
LEU
234
A
ARG
235
n
251
ARG
235
A
LEU
236
n
252
LEU
236
A
PRO
237
n
253
PRO
237
A
LYS
238
n
254
LYS
238
A
LYS
239
n
255
LYS
239
A
VAL
240
n
256
VAL
240
A
PHE
241
n
257
PHE
241
A
GLU
242
n
258
GLU
242
A
ALA
243
n
259
ALA
243
A
ALA
244
n
260
ALA
244
A
VAL
245
n
261
VAL
245
A
ALA
246
n
262
ALA
246
A
SER
247
n
263
SER
247
A
ILE
248
n
264
ILE
248
A
LYS
249
n
265
LYS
249
A
ALA
250
n
266
ALA
250
A
ALA
251
n
267
ALA
251
A
SER
252
n
268
SER
252
A
SER
253
n
269
SER
253
A
THR
254
n
270
THR
254
A
GLU
255
n
271
GLU
255
A
n
272
256
A
PHE
257
n
273
PHE
257
A
PRO
258
n
274
PRO
258
A
ASP
259
n
275
ASP
259
A
GLY
260
n
276
GLY
260
A
PHE
261
n
277
PHE
261
A
TRP
262
n
278
TRP
262
A
LEU
263
n
279
LEU
263
A
GLY
264
n
280
GLY
264
A
GLU
265
n
281
GLU
265
A
GLN
266
n
282
GLN
266
A
LEU
267
n
283
LEU
267
A
VAL
268
n
284
VAL
268
A
CYS
269
n
285
CYS
269
A
TRP
270
n
286
TRP
270
A
GLN
271
n
287
GLN
271
A
ALA
272
n
288
ALA
272
A
GLY
273
n
289
GLY
273
A
THR
274
n
290
THR
274
A
THR
275
n
291
THR
275
A
PRO
276
n
292
PRO
276
A
TRP
277
n
293
TRP
277
A
ASN
278
n
294
ASN
278
A
ILE
279
n
295
ILE
279
A
PHE
280
n
296
PHE
280
A
PRO
281
n
297
PRO
281
A
VAL
282
n
298
VAL
282
A
ILE
283
n
299
ILE
283
A
SER
284
n
300
SER
284
A
LEU
285
n
301
LEU
285
A
TYR
286
n
302
TYR
286
A
LEU
287
n
303
LEU
287
A
MET
288
n
304
MET
288
A
GLY
289
n
305
GLY
289
A
GLU
290
n
306
GLU
290
A
VAL
291
n
307
VAL
291
A
THR
292
n
308
THR
292
A
ASN
293
n
309
ASN
293
A
GLN
294
n
310
GLN
294
A
SER
295
n
311
SER
295
A
PHE
296
n
312
PHE
296
A
ARG
297
n
313
ARG
297
A
ILE
298
n
314
ILE
298
A
THR
299
n
315
THR
299
A
ILE
300
n
316
ILE
300
A
LEU
301
n
317
LEU
301
A
PRO
302
n
318
PRO
302
A
GLN
303
n
319
GLN
303
A
GLN
304
n
320
GLN
304
A
TYR
305
n
321
TYR
305
A
LEU
306
n
322
LEU
306
A
ARG
307
n
323
ARG
307
A
PRO
308
n
324
PRO
308
A
VAL
309
n
325
VAL
309
A
n
326
310
A
n
327
311
A
n
328
312
A
n
329
313
A
n
330
314
A
n
331
315
A
n
332
316
A
n
333
317
A
ASP
318
n
334
ASP
318
A
CYS
319
n
335
CYS
319
A
TYR
320
n
336
TYR
320
A
LYS
321
n
337
LYS
321
A
PHE
322
n
338
PHE
322
A
ALA
323
n
339
ALA
323
A
ILE
324
n
340
ILE
324
A
SER
325
n
341
SER
325
A
GLN
326
n
342
GLN
326
A
SER
327
n
343
SER
327
A
SER
328
n
344
SER
328
A
THR
329
n
345
THR
329
A
GLY
330
n
346
GLY
330
A
THR
331
n
347
THR
331
A
VAL
332
n
348
VAL
332
A
MET
333
n
349
MET
333
A
GLY
334
n
350
GLY
334
A
ALA
335
n
351
ALA
335
A
VAL
336
n
352
VAL
336
A
ILE
337
n
353
ILE
337
A
MET
338
n
354
MET
338
A
GLU
339
n
355
GLU
339
A
GLY
340
n
356
GLY
340
A
PHE
341
n
357
PHE
341
A
TYR
342
n
358
TYR
342
A
VAL
343
n
359
VAL
343
A
VAL
344
n
360
VAL
344
A
PHE
345
n
361
PHE
345
A
ASP
346
n
362
ASP
346
A
ARG
347
n
363
ARG
347
A
ALA
348
n
364
ALA
348
A
ARG
349
n
365
ARG
349
A
LYS
350
n
366
LYS
350
A
ARG
351
n
367
ARG
351
A
ILE
352
n
368
ILE
352
A
GLY
353
n
369
GLY
353
A
PHE
354
n
370
PHE
354
A
ALA
355
n
371
ALA
355
A
VAL
356
n
372
VAL
356
A
SER
357
n
373
SER
357
A
ALA
358
n
374
ALA
358
A
CYS
359
n
375
CYS
359
A
HIS
360
n
376
HIS
360
A
VAL
361
n
377
VAL
361
A
HIS
362
n
378
HIS
362
A
ASP
363
n
379
ASP
363
A
GLU
364
n
380
GLU
364
A
PHE
365
n
381
PHE
365
A
ARG
366
n
382
ARG
366
A
THR
367
n
383
THR
367
A
ALA
368
n
384
ALA
368
A
ALA
369
n
385
ALA
369
A
VAL
370
n
386
VAL
370
A
GLU
371
n
387
GLU
371
A
GLY
372
n
388
GLY
372
A
PRO
373
n
389
PRO
373
A
PHE
374
n
390
PHE
374
A
VAL
375
n
391
VAL
375
A
THR
376
n
392
THR
376
A
LEU
377
n
393
LEU
377
A
ASP
378
n
394
ASP
378
A
MET
379
n
395
MET
379
A
GLU
380
n
396
GLU
380
A
ASP
381
n
397
ASP
381
A
CYS
382
n
398
CYS
382
A
GLY
383
n
399
GLY
383
A
TYR
384
n
400
TYR
384
A
ASN
385
n
401
ASN
385
A
ILE
386
n
402
ILE
386
A
n
403
387
A
n
404
388
A
n
405
389
A
n
406
390
A
n
407
391
A
n
408
392
A
n
409
393
A
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
VAL
69
A
N
VAL
85
A
O
TRP
76
A
O
TRP
92
A
O
SER
86
A
O
SER
102
A
N
THR
19
A
N
THR
35
A
O
TYR
15
A
O
TYR
31
A
N
ARG
7
A
N
ARG
23
A
N
LEU
6
A
N
LEU
22
A
O
GLY
172
A
O
GLY
188
A
O
SER
173
A
O
SER
189
A
N
GLN
153
A
N
GLN
169
A
N
PHE
150
A
N
PHE
166
A
O
PHE
345
A
O
PHE
361
A
N
TYR
342
A
N
TYR
358
A
O
ALA
355
A
O
ALA
371
A
O
ILE
352
A
O
ILE
368
A
N
THR
191
A
N
THR
207
A
N
VAL
69
A
N
VAL
85
A
O
TRP
76
A
O
TRP
92
A
N
VAL
85
A
N
VAL
101
A
O
VAL
95
A
O
VAL
111
A
O
ILE
102
A
O
ILE
118
A
N
VAL
40
A
N
VAL
56
A
N
ALA
39
A
N
ALA
55
A
O
ILE
118
A
O
ILE
134
A
O
LEU
119
A
O
LEU
135
A
N
LEU
30
A
N
LEU
46
A
O
ILE
29
A
O
ILE
45
A
N
VAL
16
A
N
VAL
32
A
O
TYR
15
A
O
TYR
31
A
N
ARG
7
A
N
ARG
23
A
N
LEU
6
A
N
LEU
22
A
O
GLY
172
A
O
GLY
188
A
O
SER
173
A
O
SER
189
A
N
GLN
153
A
N
GLN
169
A
N
PHE
150
A
N
PHE
166
A
O
PHE
345
A
O
PHE
361
A
N
TYR
342
A
N
TYR
358
A
O
ALA
355
A
O
ALA
371
A
O
ILE
352
A
O
ILE
368
A
N
THR
191
A
N
THR
207
A
O
GLN
211
A
O
GLN
227
A
N
ILE
208
A
N
ILE
224
A
N
ARG
205
A
N
ARG
221
A
O
TYR
286
A
O
TYR
302
A
N
LEU
285
A
N
LEU
301
A
O
ILE
298
A
O
ILE
314
A
N
ARG
297
A
N
ARG
313
A
O
GLU
371
A
O
GLU
387
A
N
ILE
226
A
N
ILE
242
A
O
MET
333
A
O
MET
349
A
O
VAL
332
A
O
VAL
348
A
N
ARG
235
A
N
ARG
251
A
N
LEU
236
A
N
LEU
252
A
O
SER
325
A
O
SER
341
A
N
VAL
268
A
N
VAL
284
A
O
TYR
320
A
O
TYR
336
A
O
LYS
321
A
O
LYS
337
A
N
ARG
307
A
N
ARG
323
1
A
GLU
-15
A
GLU
1
1
Y
1
A
THR
-14
A
THR
2
1
Y
1
A
ASP
-13
A
ASP
3
1
Y
1
A
GLU
-12
A
GLU
4
1
Y
1
A
GLU
-11
A
GLU
5
1
Y
1
A
PRO
-10
A
PRO
6
1
Y
1
A
GLU
-9
A
GLU
7
1
Y
1
A
GLU
-8
A
GLU
8
1
Y
1
A
PRO
-7
A
PRO
9
1
Y
1
A
GLY
-6
A
GLY
10
1
Y
1
A
ARG
-5
A
ARG
11
1
Y
1
A
ALA
157
A
ALA
173
1
Y
1
A
GLY
158
A
GLY
174
1
Y
1
A
PHE
159
A
PHE
175
1
Y
1
A
PRO
160
A
PRO
176
1
Y
1
A
LEU
161
A
LEU
177
1
Y
1
A
ASN
162
A
ASN
178
1
Y
1
A
GLN
163
A
GLN
179
1
Y
1
A
SER
164
A
SER
180
1
Y
1
A
GLU
165
A
GLU
181
1
Y
1
A
VAL
166
A
VAL
182
1
Y
1
A
LEU
167
A
LEU
183
1
Y
1
A
ALA
168
A
ALA
184
1
Y
1
A
LYS
256
A
LYS
272
1
Y
1
A
GLU
310
A
GLU
326
1
Y
1
A
ASP
311
A
ASP
327
1
Y
1
A
VAL
312
A
VAL
328
1
Y
1
A
ALA
313
A
ALA
329
1
Y
1
A
THR
314
A
THR
330
1
Y
1
A
SER
315
A
SER
331
1
Y
1
A
GLN
316
A
GLN
332
1
Y
1
A
ASP
317
A
ASP
333
1
Y
1
A
PRO
387
A
PRO
403
1
Y
1
A
GLN
388
A
GLN
404
1
Y
1
A
THR
389
A
THR
405
1
Y
1
A
ASP
390
A
ASP
406
1
Y
1
A
GLU
391
A
GLU
407
1
Y
1
A
SER
392
A
SER
408
1
Y
1
A
THR
393
A
THR
409
1
Y
1
A
A
O
O
ARG
HOH
-4
2063
2.17
1
5.43
0.90
118.30
123.73
A
A
A
CB
CG
OD2
ASP
ASP
ASP
4
4
4
N
1
5.60
0.90
118.30
123.90
A
A
A
CB
CG
OD2
ASP
ASP
ASP
180
180
180
N
1
5.44
0.90
118.30
123.74
A
A
A
CB
CG
OD2
ASP
ASP
ASP
318
318
318
N
1
A
GLN
73
-78.25
-77.32
1
A
HIS
89
-96.85
41.26
1
A
TRP
197
-136.32
-80.89
1
A
ASP
223
89.19
-78.35
1
A
ASP
363
-108.64
-168.48
32.338
-0.02000
-0.01000
0.00000
-0.02000
0.00000
0.03000
0.23784
0.19937
0.20134
2.30
48.80
1212
22469
5.1
97.99
RANDOM
1
THROUGHOUT
FOURIER SYNTHESIS
2.30
48.80
175
3103
16
0
2912
0.008
1.058
0.271
0.218
2.36
83
1618
2.300
50.000
3BUH
24169
0.103
1
27.1000
98.6
2.30
2.38
4.200
0.439
98.6
refinement
REFMAC
data reduction
DENZO
data scaling
SCALEPACK
BACE-1 complexed with compound 4
1
N
N
2
N
N
3
N
N
A
GLN
53
A
GLN
69
HELX_P
A
SER
57
A
SER
73
5
1
5
A
TYR
123
A
TYR
139
HELX_P
A
ALA
127
A
ALA
143
5
2
5
A
PRO
135
A
PRO
151
HELX_P
A
THR
144
A
THR
160
1
3
10
A
ASP
180
A
ASP
196
HELX_P
A
SER
182
A
SER
198
5
4
3
A
ASP
216
A
ASP
232
HELX_P
A
TYR
222
A
TYR
238
5
5
7
A
LYS
238
A
LYS
254
HELX_P
A
SER
252
A
SER
268
1
6
15
A
PRO
258
A
PRO
274
HELX_P
A
LEU
263
A
LEU
279
1
7
6
A
LEU
301
A
LEU
317
HELX_P
A
TYR
305
A
TYR
321
1
8
5
A
GLY
334
A
GLY
350
HELX_P
A
GLU
339
A
GLU
355
1
9
6
A
ARG
347
A
ARG
363
HELX_P
A
ARG
349
A
ARG
365
5
10
3
A
ASP
378
A
ASP
394
HELX_P
A
GLY
383
A
GLY
399
5
11
6
disulf
2.065
A
CYS
155
A
SG
CYS
171
1_555
A
CYS
359
A
SG
CYS
375
1_555
disulf
2.034
A
CYS
217
A
SG
CYS
233
1_555
A
CYS
382
A
SG
CYS
398
1_555
disulf
2.038
A
CYS
269
A
SG
CYS
285
1_555
A
CYS
319
A
SG
CYS
335
1_555
HYDROLASE
ALZHEIMER'S DISEASE, ASPARTIC PROTEASE, BETA-SECRETASE, MEMAPSIN 2, FRAGMENT SCREEN, ALTERNATIVE SPLICING, ASPARTYL PROTEASE, GLYCOPROTEIN, HYDROLASE, MEMBRANE, TRANSMEMBRANE, ZYMOGEN
A
SER
22
A
SER
38
1
A
PRO
23
A
PRO
39
0.05
A
ARG
128
A
ARG
144
1
A
PRO
129
A
PRO
145
-0.06
A
GLY
372
A
GLY
388
1
A
PRO
373
A
PRO
389
-4.59
BACE1_HUMAN
UNP
1
46
P56817
ETDEEPEEPGRRGSFVEMVDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLR
KGVYVPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQT
HVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDK
SIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQ
YLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAVEGPFVTLDMEDCGY
NIPQTDEST
46
454
3BUH
-15
393
P56817
A
1
1
409
1
LYS
engineered mutation
ALA
246
3BUH
A
P56817
UNP
307
262
9
13
5
4
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
A
ARG
61
A
ARG
77
A
PRO
70
A
PRO
86
A
LYS
75
A
LYS
91
A
SER
86
A
SER
102
A
TYR
14
A
TYR
30
A
VAL
20
A
VAL
36
A
LEU
6
A
LEU
22
A
GLY
8
A
GLY
24
A
VAL
170
A
VAL
186
A
ILE
176
A
ILE
192
A
PHE
150
A
PHE
166
A
CYS
155
A
CYS
171
A
PHE
341
A
PHE
357
A
ASP
346
A
ASP
362
A
ARG
351
A
ARG
367
A
SER
357
A
SER
373
A
TYR
184
A
TYR
200
A
PRO
192
A
PRO
208
A
ARG
61
A
ARG
77
A
PRO
70
A
PRO
86
A
LYS
75
A
LYS
91
A
SER
86
A
SER
102
A
VAL
95
A
VAL
111
A
ASP
106
A
ASP
122
A
PHE
38
A
PHE
54
A
GLY
41
A
GLY
57
A
GLY
117
A
GLY
133
A
GLY
120
A
GLY
136
A
GLN
25
A
GLN
41
A
ASP
32
A
ASP
48
A
TYR
14
A
TYR
30
A
VAL
20
A
VAL
36
A
LEU
6
A
LEU
22
A
GLY
8
A
GLY
24
A
VAL
170
A
VAL
186
A
ILE
176
A
ILE
192
A
PHE
150
A
PHE
166
A
CYS
155
A
CYS
171
A
PHE
341
A
PHE
357
A
ASP
346
A
ASP
362
A
ARG
351
A
ARG
367
A
SER
357
A
SER
373
A
TYR
184
A
TYR
200
A
PRO
192
A
PRO
208
A
GLN
211
A
GLN
227
A
ASP
212
A
ASP
228
A
ILE
203
A
ILE
219
A
ILE
208
A
ILE
224
A
ILE
283
A
ILE
299
A
MET
288
A
MET
304
A
GLN
294
A
GLN
310
A
ILE
300
A
ILE
316
A
ALA
369
A
ALA
385
A
VAL
375
A
VAL
391
A
SER
225
A
SER
241
A
VAL
227
A
VAL
243
A
THR
331
A
THR
347
A
MET
333
A
MET
349
A
LEU
234
A
LEU
250
A
PRO
237
A
PRO
253
A
ILE
324
A
ILE
340
A
SER
327
A
SER
343
A
VAL
268
A
VAL
284
A
CYS
269
A
CYS
285
A
CYS
319
A
CYS
335
A
PHE
322
A
PHE
338
A
LEU
306
A
LEU
322
A
PRO
308
A
PRO
324
BINDING SITE FOR RESIDUE AED A 394
A
AED
394
Software
9
A
GLY
11
A
GLY
27
9
1_555
A
GLN
12
A
GLN
28
9
1_555
A
GLY
13
A
GLY
29
9
1_555
A
ASP
32
A
ASP
48
9
1_555
A
LYS
107
A
LYS
123
9
1_555
A
PHE
108
A
PHE
124
9
1_555
A
THR
232
A
THR
248
9
1_555
A
HOH
1046
C
HOH
9
1_555
A
HOH
2026
C
HOH
9
1_555
178
P 61 2 2