0.012962
0.007484
0.000000
0.000000
0.014967
0.000000
0.000000
0.000000
0.019290
0.00000
0.00000
0.00000
Reddy, M.C.
Palaninathan, S.K.
Shetty, N.D.
Owen, J.L.
Sacchettini, J.C.
TB Structural Genomics Consortium (TBSGC)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
9
90.00
90.00
120.00
77.149
77.149
51.840
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
O
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
N
N
58
S
C
N
59
N
C
N
60
N
O
N
61
N
C
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
N
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
N
N
78
S
C
N
79
N
C
N
80
N
O
N
81
N
C
N
82
N
C
N
83
N
C
N
84
N
O
N
85
N
O
N
86
N
O
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
N
N
97
N
C
N
98
N
C
N
99
N
O
N
100
N
O
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
N
N
107
S
C
N
108
N
C
N
109
N
O
N
110
N
C
Y
111
N
C
Y
112
N
N
Y
113
N
C
Y
114
N
C
Y
115
N
N
N
116
N
O
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
O
N
128
N
H
N
129
N
H
N
130
N
N
N
131
S
C
N
132
N
C
N
133
N
O
N
134
S
C
N
135
N
C
N
136
N
C
N
137
N
C
N
138
N
O
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
N
N
153
S
C
N
154
N
C
N
155
N
O
N
156
N
C
N
157
N
C
N
158
N
C
N
159
N
C
N
160
N
O
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
N
N
175
S
C
N
176
N
C
N
177
N
O
N
178
N
C
N
179
N
C
N
180
N
C
N
181
N
C
N
182
N
N
N
183
N
O
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
N
N
200
S
C
N
201
N
C
N
202
N
O
N
203
N
C
N
204
N
C
N
205
N
S
N
206
N
C
N
207
N
O
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
N
N
220
S
C
N
221
N
C
N
222
N
O
N
223
N
C
Y
224
N
C
Y
225
N
C
Y
226
N
C
Y
227
N
C
Y
228
N
C
Y
229
N
C
N
230
N
O
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
N
N
243
S
C
N
244
N
C
N
245
N
O
N
246
N
C
N
247
N
C
N
248
N
C
N
249
N
O
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
N
N
260
S
C
N
261
N
C
N
262
N
O
N
263
N
C
N
264
N
O
N
265
N
O
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
R
C
N
278
N
O
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
Y
295
N
C
Y
296
N
C
Y
297
N
C
Y
298
N
N
Y
299
N
C
Y
300
N
C
Y
301
N
C
Y
302
N
C
Y
303
N
C
N
304
N
O
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
N
N
318
S
C
N
319
N
C
N
320
N
O
N
321
N
C
Y
322
N
C
Y
323
N
C
Y
324
N
C
Y
325
N
C
Y
326
N
C
Y
327
N
C
N
328
N
O
N
329
N
O
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
N
N
342
S
C
N
343
N
C
N
344
N
O
N
345
N
C
N
346
N
C
N
347
N
C
N
348
N
O
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
doub
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
doub
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
doub
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
doub
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
Y
111
N
sing
Y
112
N
doub
Y
113
N
doub
N
114
N
sing
Y
115
N
sing
N
116
N
sing
Y
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
doub
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
doub
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
doub
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
doub
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
doub
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
Y
219
N
doub
Y
220
N
sing
Y
221
N
sing
N
222
N
sing
Y
223
N
doub
N
224
N
sing
Y
225
N
doub
N
226
N
sing
Y
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
doub
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
doub
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
Y
288
N
doub
Y
289
N
sing
Y
290
N
sing
N
291
N
sing
Y
292
N
doub
Y
293
N
sing
Y
294
N
sing
N
295
N
sing
Y
296
N
sing
Y
297
N
doub
N
298
N
sing
Y
299
N
doub
N
300
N
sing
Y
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
doub
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
Y
316
N
doub
Y
317
N
sing
Y
318
N
sing
N
319
N
sing
Y
320
N
doub
N
321
N
sing
Y
322
N
doub
N
323
N
sing
Y
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
doub
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
US
Protein Sci.
PRCIEI
0795
0961-8368
19
1513
1524
10.1002/pro.430
20521335
Crystal structures of the apo and ATP bound Mycobacterium tuberculosis nitrogen regulatory PII protein.
2010
10.2210/pdb3bzq/pdb
pdb_00003bzq
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
Rosenbaum-Rock high-resolution double-crystal monochromator
CCD
2005-08-10
ADSC QUANTUM 315
SINGLE WAVELENGTH
M
x-ray
1
0.979
1.0
19-ID
APS
0.979
SYNCHROTRON
APS BEAMLINE 19-ID
12440.220
Nitrogen regulatory protein P-II
1
man
polymer
18.015
water
136
nat
water
no
no
GHMKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVRIEVVVDDSIVDKVVDSIV
RAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL
GHMKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVRIEVVVDDSIVDKVVDSIV
RAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL
A
Rv2919c
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Mycobacterium
Mycobacterium tuberculosis
H37RV
Escherichia
Escherichia coli
sample
glnB
83332
Mycobacterium tuberculosis H37Rv
469008
Escherichia coli BL21(DE3)
Bl21(DE3)
PLASMID
pET28b
1
2.39
48.46
VAPOR DIFFUSION, HANGING DROP
6.5
0.1 M Immidazole, pH 6.5, 1.4 M Sodium acetate, VAPOR DIFFUSION, HANGING DROP, temperature 290K
290
TB Structural Genomics Consortium
TBSGC
PSI, Protein Structure Initiative
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_ref_seq_dif
repository
Initial release
Version format compliance
Data collection
Database references
Refinement description
1
0
2008-04-01
1
1
2011-07-13
1
2
2023-08-30
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
Y
RCSB
Y
RCSB
2008-01-18
REL
REL
HOH
water
1GNK
PDB entry 1GNK
PDB
experimental model
HOH
1
2
HOH
HOH
113
A
HOH
2
2
HOH
HOH
114
A
HOH
3
2
HOH
HOH
115
A
HOH
4
2
HOH
HOH
116
A
HOH
5
2
HOH
HOH
117
A
HOH
6
2
HOH
HOH
118
A
HOH
7
2
HOH
HOH
119
A
HOH
8
2
HOH
HOH
120
A
HOH
9
2
HOH
HOH
121
A
HOH
10
2
HOH
HOH
122
A
HOH
11
2
HOH
HOH
123
A
HOH
12
2
HOH
HOH
124
A
HOH
13
2
HOH
HOH
125
A
HOH
14
2
HOH
HOH
126
A
HOH
15
2
HOH
HOH
127
A
HOH
16
2
HOH
HOH
128
A
HOH
17
2
HOH
HOH
129
A
HOH
18
2
HOH
HOH
130
A
HOH
19
2
HOH
HOH
131
A
HOH
20
2
HOH
HOH
132
A
HOH
21
2
HOH
HOH
133
A
HOH
22
2
HOH
HOH
134
A
HOH
23
2
HOH
HOH
135
A
HOH
24
2
HOH
HOH
136
A
HOH
25
2
HOH
HOH
137
A
HOH
26
2
HOH
HOH
138
A
HOH
27
2
HOH
HOH
139
A
HOH
28
2
HOH
HOH
140
A
HOH
29
2
HOH
HOH
141
A
HOH
30
2
HOH
HOH
142
A
HOH
31
2
HOH
HOH
143
A
HOH
32
2
HOH
HOH
144
A
HOH
33
2
HOH
HOH
145
A
HOH
34
2
HOH
HOH
146
A
HOH
35
2
HOH
HOH
147
A
HOH
36
2
HOH
HOH
148
A
HOH
37
2
HOH
HOH
149
A
HOH
38
2
HOH
HOH
150
A
HOH
39
2
HOH
HOH
151
A
HOH
40
2
HOH
HOH
152
A
HOH
41
2
HOH
HOH
153
A
HOH
42
2
HOH
HOH
154
A
HOH
43
2
HOH
HOH
155
A
HOH
44
2
HOH
HOH
156
A
HOH
45
2
HOH
HOH
157
A
HOH
46
2
HOH
HOH
158
A
HOH
47
2
HOH
HOH
159
A
HOH
48
2
HOH
HOH
160
A
HOH
49
2
HOH
HOH
161
A
HOH
50
2
HOH
HOH
162
A
HOH
51
2
HOH
HOH
163
A
HOH
52
2
HOH
HOH
164
A
HOH
53
2
HOH
HOH
165
A
HOH
54
2
HOH
HOH
166
A
HOH
55
2
HOH
HOH
167
A
HOH
56
2
HOH
HOH
168
A
HOH
57
2
HOH
HOH
169
A
HOH
58
2
HOH
HOH
170
A
HOH
59
2
HOH
HOH
171
A
HOH
60
2
HOH
HOH
172
A
HOH
61
2
HOH
HOH
173
A
HOH
62
2
HOH
HOH
174
A
HOH
63
2
HOH
HOH
175
A
HOH
64
2
HOH
HOH
176
A
HOH
65
2
HOH
HOH
177
A
HOH
66
2
HOH
HOH
178
A
HOH
67
2
HOH
HOH
179
A
HOH
68
2
HOH
HOH
180
A
HOH
69
2
HOH
HOH
181
A
HOH
70
2
HOH
HOH
182
A
HOH
71
2
HOH
HOH
183
A
HOH
72
2
HOH
HOH
184
A
HOH
73
2
HOH
HOH
185
A
HOH
74
2
HOH
HOH
186
A
HOH
75
2
HOH
HOH
187
A
HOH
76
2
HOH
HOH
188
A
HOH
77
2
HOH
HOH
189
A
HOH
78
2
HOH
HOH
190
A
HOH
79
2
HOH
HOH
191
A
HOH
80
2
HOH
HOH
192
A
HOH
81
2
HOH
HOH
193
A
HOH
82
2
HOH
HOH
194
A
HOH
83
2
HOH
HOH
195
A
HOH
84
2
HOH
HOH
196
A
HOH
85
2
HOH
HOH
197
A
HOH
86
2
HOH
HOH
198
A
HOH
87
2
HOH
HOH
199
A
HOH
88
2
HOH
HOH
200
A
HOH
89
2
HOH
HOH
201
A
HOH
90
2
HOH
HOH
202
A
HOH
91
2
HOH
HOH
203
A
HOH
92
2
HOH
HOH
204
A
HOH
93
2
HOH
HOH
205
A
HOH
94
2
HOH
HOH
206
A
HOH
95
2
HOH
HOH
207
A
HOH
96
2
HOH
HOH
208
A
HOH
97
2
HOH
HOH
209
A
HOH
98
2
HOH
HOH
210
A
HOH
99
2
HOH
HOH
211
A
HOH
100
2
HOH
HOH
212
A
HOH
101
2
HOH
HOH
213
A
HOH
102
2
HOH
HOH
214
A
HOH
103
2
HOH
HOH
215
A
HOH
104
2
HOH
HOH
216
A
HOH
105
2
HOH
HOH
217
A
HOH
106
2
HOH
HOH
218
A
HOH
107
2
HOH
HOH
219
A
HOH
108
2
HOH
HOH
220
A
HOH
109
2
HOH
HOH
221
A
HOH
110
2
HOH
HOH
222
A
HOH
111
2
HOH
HOH
223
A
HOH
112
2
HOH
HOH
224
A
HOH
113
2
HOH
HOH
225
A
HOH
114
2
HOH
HOH
226
A
HOH
115
2
HOH
HOH
227
A
HOH
116
2
HOH
HOH
228
A
HOH
117
2
HOH
HOH
229
A
HOH
118
2
HOH
HOH
230
A
HOH
119
2
HOH
HOH
231
A
HOH
120
2
HOH
HOH
232
A
HOH
121
2
HOH
HOH
233
A
HOH
122
2
HOH
HOH
234
A
HOH
123
2
HOH
HOH
235
A
HOH
124
2
HOH
HOH
236
A
HOH
125
2
HOH
HOH
237
A
HOH
126
2
HOH
HOH
238
A
HOH
127
2
HOH
HOH
239
A
HOH
128
2
HOH
HOH
240
A
HOH
129
2
HOH
HOH
241
A
HOH
130
2
HOH
HOH
242
A
HOH
131
2
HOH
HOH
243
A
HOH
132
2
HOH
HOH
244
A
HOH
133
2
HOH
HOH
245
A
HOH
134
2
HOH
HOH
246
A
HOH
136
2
HOH
HOH
247
A
HOH
137
2
HOH
HOH
248
A
GLY
-1
n
1
GLY
-1
A
ALA
0
n
2
HIS
0
A
MET
1
n
3
MET
1
A
LYS
2
n
4
LYS
2
A
LEU
3
n
5
LEU
3
A
ILE
4
n
6
ILE
4
A
THR
5
n
7
THR
5
A
ALA
6
n
8
ALA
6
A
ILE
7
n
9
ILE
7
A
VAL
8
n
10
VAL
8
A
LYS
9
n
11
LYS
9
A
PRO
10
n
12
PRO
10
A
PHE
11
n
13
PHE
11
A
THR
12
n
14
THR
12
A
LEU
13
n
15
LEU
13
A
ASP
14
n
16
ASP
14
A
ASP
15
n
17
ASP
15
A
VAL
16
n
18
VAL
16
A
LYS
17
n
19
LYS
17
A
THR
18
n
20
THR
18
A
SER
19
n
21
SER
19
A
LEU
20
n
22
LEU
20
A
GLU
21
n
23
GLU
21
A
ASP
22
n
24
ASP
22
A
ALA
23
n
25
ALA
23
A
GLY
24
n
26
GLY
24
A
VAL
25
n
27
VAL
25
A
LEU
26
n
28
LEU
26
A
GLY
27
n
29
GLY
27
A
MET
28
n
30
MET
28
A
THR
29
n
31
THR
29
A
VAL
30
n
32
VAL
30
A
SER
31
n
33
SER
31
A
GLU
32
n
34
GLU
32
A
ILE
33
n
35
ILE
33
A
GLN
34
n
36
GLN
34
A
GLY
35
n
37
GLY
35
A
TYR
36
n
38
TYR
36
A
GLY
37
n
39
GLY
37
A
ALA
38
n
40
ARG
38
A
n
41
39
A
n
42
40
A
n
43
41
A
n
44
42
A
n
45
43
A
n
46
44
A
n
47
45
A
n
48
46
A
n
49
47
A
n
50
48
A
n
51
49
A
n
52
50
A
n
53
51
A
n
54
52
A
n
55
53
A
ASP
54
n
56
ASP
54
A
PHE
55
n
57
PHE
55
A
VAL
56
n
58
VAL
56
A
PRO
57
n
59
PRO
57
A
LYS
58
n
60
LYS
58
A
VAL
59
n
61
VAL
59
A
ARG
60
n
62
ARG
60
A
ILE
61
n
63
ILE
61
A
GLU
62
n
64
GLU
62
A
VAL
63
n
65
VAL
63
A
VAL
64
n
66
VAL
64
A
VAL
65
n
67
VAL
65
A
ASP
66
n
68
ASP
66
A
ASP
67
n
69
ASP
67
A
SER
68
n
70
SER
68
A
ILE
69
n
71
ILE
69
A
VAL
70
n
72
VAL
70
A
ASP
71
n
73
ASP
71
A
LYS
72
n
74
LYS
72
A
VAL
73
n
75
VAL
73
A
VAL
74
n
76
VAL
74
A
ASP
75
n
77
ASP
75
A
SER
76
n
78
SER
76
A
ILE
77
n
79
ILE
77
A
VAL
78
n
80
VAL
78
A
ARG
79
n
81
ARG
79
A
ALA
80
n
82
ALA
80
A
ALA
81
n
83
ALA
81
A
ARG
82
n
84
ARG
82
A
THR
83
n
85
THR
83
A
GLY
84
n
86
GLY
84
A
LYS
85
n
87
LYS
85
A
ILE
86
n
88
ILE
86
A
GLY
87
n
89
GLY
87
A
ASP
88
n
90
ASP
88
A
GLY
89
n
91
GLY
89
A
LYS
90
n
92
LYS
90
A
VAL
91
n
93
VAL
91
A
TRP
92
n
94
TRP
92
A
VAL
93
n
95
VAL
93
A
SER
94
n
96
SER
94
A
PRO
95
n
97
PRO
95
A
VAL
96
n
98
VAL
96
A
ASP
97
n
99
ASP
97
A
THR
98
n
100
THR
98
A
ILE
99
n
101
ILE
99
A
VAL
100
n
102
VAL
100
A
ARG
101
n
103
ARG
101
A
VAL
102
n
104
VAL
102
A
ARG
103
n
105
ARG
103
A
THR
104
n
106
THR
104
A
GLY
105
n
107
GLY
105
A
GLU
106
n
108
GLU
106
A
ARG
107
n
109
ARG
107
A
GLY
108
n
110
GLY
108
A
HIS
109
n
111
HIS
109
A
ASP
110
n
112
ASP
110
A
ALA
111
n
113
ALA
111
A
LEU
112
n
114
LEU
112
A
author_and_software_defined_assembly
PISA
3
trimeric
6130
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
3_555
-x+y,-x,z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
-0.8660254038
0.0000000000
0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_555
-y,x-y,z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
33
A
N
ILE
35
A
O
LYS
58
A
O
LYS
60
A
O
ILE
61
A
O
ILE
63
A
N
ALA
6
A
N
ALA
8
A
N
ILE
7
A
N
ILE
9
A
O
LYS
90
A
O
LYS
92
1
A
HOH
132
B
HOH
1
A
HOH
138
B
HOH
1
A
CG
HIS
0
A
CG
HIS
2
1
Y
1
A
ND1
HIS
0
A
ND1
HIS
2
1
Y
1
A
CD2
HIS
0
A
CD2
HIS
2
1
Y
1
A
CE1
HIS
0
A
CE1
HIS
2
1
Y
1
A
NE2
HIS
0
A
NE2
HIS
2
1
Y
1
A
CG
ARG
38
A
CG
ARG
40
1
Y
1
A
CD
ARG
38
A
CD
ARG
40
1
Y
1
A
NE
ARG
38
A
NE
ARG
40
1
Y
1
A
CZ
ARG
38
A
CZ
ARG
40
1
Y
1
A
NH1
ARG
38
A
NH1
ARG
40
1
Y
1
A
NH2
ARG
38
A
NH2
ARG
40
1
Y
1
A
GLN
39
A
GLN
41
1
Y
1
A
LYS
40
A
LYS
42
1
Y
1
A
GLY
41
A
GLY
43
1
Y
1
A
HIS
42
A
HIS
44
1
Y
1
A
THR
43
A
THR
45
1
Y
1
A
GLU
44
A
GLU
46
1
Y
1
A
VAL
45
A
VAL
47
1
Y
1
A
TYR
46
A
TYR
48
1
Y
1
A
ARG
47
A
ARG
49
1
Y
1
A
GLY
48
A
GLY
50
1
Y
1
A
ALA
49
A
ALA
51
1
Y
1
A
GLU
50
A
GLU
52
1
Y
1
A
TYR
51
A
TYR
53
1
Y
1
A
SER
52
A
SER
54
1
Y
1
A
VAL
53
A
VAL
55
1
Y
16.443
-0.50
-0.25
0.00
-0.50
0.00
0.75
0.946
0.935
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.22566
0.20759
0.2085
0.2085
1.40
40.96
1131
21338
21338
5.0
99.08
0.882
0.037
RANDOM
1
THROUGHOUT
0
0
MOLECULAR REPLACEMENT
0.066
0.065
0.80
0.80
1.20
PDB entry 1GNK
MAXIMUM LIKELIHOOD
MASK
1.40
40.96
136
878
0
0
742
0.006
0.022
749
1.007
1.977
1014
5.107
5.000
97
27.667
23.704
27
11.378
15.000
134
14.392
15.000
6
0.073
0.200
127
0.003
0.020
536
0.192
0.200
346
0.294
0.200
532
0.063
0.200
92
0.142
0.200
51
0.090
0.200
30
0.528
1.500
500
0.920
2.000
793
1.378
3.000
274
2.286
4.500
221
0.233
0.223
1.436
91
1595
20
100.00
1.40
40.96
3BZQ
21338
21338
0
0
1
99.08
refinement
REFMAC
5.2.0019
data collection
ADSC
Quantum
data reduction
HKL-2000
data scaling
HKL-2000
phasing
AMoRE
High resolution crystal structure of Nitrogen Regulatory Protein (Rv2919c) of Mycobacterium tuberculosis
1
N
N
2
N
N
A
LYS
9
A
LYS
11
HELX_P
A
PHE
11
A
PHE
13
5
1
3
A
THR
12
A
THR
14
HELX_P
A
ALA
23
A
ALA
25
1
2
12
A
ILE
69
A
ILE
71
HELX_P
A
ARG
82
A
ARG
84
1
3
14
A
ARG
107
A
ARG
109
HELX_P
A
LEU
112
A
LEU
114
5
4
6
SIGNALING PROTEIN/TRANSCRIPTION
P-II, GLNB, GLNK, Mycobacterium tuberculosis, signal transductory protein, Nucleotide-binding, Transcription, Transcription regulation, SIGNAL TRANSDUCTION, NITROGEN REGULATORY, SIGNALING PROTEIN-TRANSCRIPTION COMPLEX, Structural Genomics, TB Structural Genomics Consortium, TBSGC, PSI-2, Protein Structure Initiative
GLNB_MYCTU
UNP
1
1
P64249
MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVRIEVVVDDSIVDKVVDSIVRA
ARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL
1
112
3BZQ
1
112
P64249
A
1
3
114
1
expression tag
GLY
-1
3BZQ
A
P64249
UNP
1
1
expression tag
HIS
0
3BZQ
A
P64249
UNP
2
4
anti-parallel
anti-parallel
anti-parallel
A
THR
29
A
THR
31
A
TYR
36
A
TYR
38
A
PHE
55
A
PHE
57
A
ASP
66
A
ASP
68
A
MET
1
A
MET
3
A
VAL
8
A
VAL
10
A
LYS
90
A
LYS
92
A
VAL
96
A
VAL
98
146
H 3