26.18 -5.374 14.292 -1.809 A O3' DT 1001 ATOM A O3' DT 1 1 0.50 1 O 28.97 -6.667 14.102 -0.887 A P DA 1002 ATOM A P DA 1 2 0.70 1 P 25.45 -6.328 14.428 0.517 A OP1 DA 1002 ATOM A OP1 DA 1 2 0.70 1 O 23.57 -7.351 12.894 -1.364 A OP2 DA 1002 ATOM A OP2 DA 1 2 0.70 1 O 28.73 -7.661 15.228 -1.343 A O5' DA 1002 ATOM A O5' DA 1 2 1.00 1 O 26.12 -7.535 16.629 -1.087 A C5' DA 1002 ATOM A C5' DA 1 2 1.00 1 C 22.51 -8.709 17.356 -1.732 A C4' DA 1002 ATOM A C4' DA 1 2 1.00 1 C 24.32 -8.448 17.463 -3.141 A O4' DA 1002 ATOM A O4' DA 1 2 1.00 1 O 21.42 -10.061 16.681 -1.743 A C3' DA 1002 ATOM A C3' DA 1 2 1.00 1 C 20.68 -11.152 17.673 -1.795 A O3' DA 1002 ATOM A O3' DA 1 2 1.00 1 O 23.35 -9.902 15.751 -2.957 A C2' DA 1002 ATOM A C2' DA 1 2 1.00 1 C 23.74 -9.328 16.728 -3.949 A C1' DA 1002 ATOM A C1' DA 1 2 1.00 1 C 25.18 -8.477 16.143 -4.959 A N9 DA 1002 ATOM A N9 DA 1 2 1.00 1 N 26.43 -7.865 14.926 -4.914 A C8 DA 1002 ATOM A C8 DA 1 2 1.00 1 C 28.09 -7.109 14.671 -5.953 A N7 DA 1002 ATOM A N7 DA 1 2 1.00 1 N 29.09 -7.227 15.797 -6.751 A C5 DA 1002 ATOM A C5 DA 1 2 1.00 1 C 29.18 -6.683 16.176 -8.009 A C6 DA 1002 ATOM A C6 DA 1 2 1.00 1 C 26.09 -5.860 15.414 -8.717 A N6 DA 1002 ATOM A N6 DA 1 2 1.00 1 N 28.65 -7.000 17.382 -8.532 A N1 DA 1002 ATOM A N1 DA 1 2 1.00 1 N 29.21 -7.828 18.155 -7.841 A C2 DA 1002 ATOM A C2 DA 1 2 1.00 1 C 30.51 -8.392 17.921 -6.649 A N3 DA 1002 ATOM A N3 DA 1 2 1.00 1 N 27.95 -8.062 16.719 -6.142 A C4 DA 1002 ATOM A C4 DA 1 2 1.00 1 C 18.64 -12.699 17.306 -1.668 A P DG 1003 ATOM A P DG 1 3 1.00 1 P 22.62 -12.871 16.311 -0.614 A OP1 DG 1003 ATOM A OP1 DG 1 3 1.00 1 O 21.06 -13.326 17.182 -3.005 A OP2 DG 1003 ATOM A OP2 DG 1 3 1.00 1 O 17.86 -13.292 18.619 -1.098 A O5' DG 1003 ATOM A O5' DG 1 3 1.00 1 O 17.38 -13.111 18.864 0.242 A C5' DG 1003 ATOM A C5' DG 1 3 1.00 1 C 14.85 -14.210 19.739 0.778 A C4' DG 1003 ATOM A C4' DG 1 3 1.00 1 C 17.04 -14.176 20.942 0.009 A O4' DG 1003 ATOM A O4' DG 1 3 1.00 1 O 15.93 -15.586 19.150 0.642 A C3' DG 1003 ATOM A C3' DG 1 3 1.00 1 C 18.45 -16.385 19.612 1.767 A O3' DG 1003 ATOM A O3' DG 1 3 1.00 1 O 14.49 -16.035 19.871 -0.654 A C2' DG 1003 ATOM A C2' DG 1 3 1.00 1 C 12.85 -15.401 21.259 -0.579 A C1' DG 1003 ATOM A C1' DG 1 3 1.00 1 C 9.71 -15.355 21.784 -1.952 A N9 DG 1003 ATOM A N9 DG 1 3 1.00 1 N 7.13 -14.966 21.093 -3.110 A C8 DG 1003 ATOM A C8 DG 1 3 1.00 1 C 9.65 -15.105 21.763 -4.211 A N7 DG 1003 ATOM A N7 DG 1 3 1.00 1 N 7.06 -15.617 22.943 -3.743 A C5 DG 1003 ATOM A C5 DG 1 3 1.00 1 C 7.83 -15.975 24.075 -4.398 A C6 DG 1003 ATOM A C6 DG 1 3 1.00 1 C 14.25 -15.920 24.321 -5.565 A O6 DG 1003 ATOM A O6 DG 1 3 1.00 1 O 7.32 -16.460 25.118 -3.651 A N1 DG 1003 ATOM A N1 DG 1 3 1.00 1 N 5.50 -16.547 25.083 -2.273 A C2 DG 1003 ATOM A C2 DG 1 3 1.00 1 C 7.33 -17.024 26.175 -1.654 A N2 DG 1003 ATOM A N2 DG 1 3 1.00 1 N 5.92 -16.214 24.029 -1.617 A N3 DG 1003 ATOM A N3 DG 1 3 1.00 1 N 5.55 -15.755 22.998 -2.373 A C4 DG 1003 ATOM A C4 DG 1 3 1.00 1 C 17.29 -17.943 19.179 1.916 A P DG 1004 ATOM A P DG 1 4 1.00 1 P 21.49 -18.004 18.449 3.168 A OP1 DG 1004 ATOM A OP1 DG 1 4 1.00 1 O 17.36 -18.444 18.470 0.731 A OP2 DG 1004 ATOM A OP2 DG 1 4 1.00 1 O 12.85 -18.647 20.536 2.030 A O5' DG 1004 ATOM A O5' DG 1 4 1.00 1 O 15.48 -18.079 21.581 2.721 A C5' DG 1004 ATOM A C5' DG 1 4 1.00 1 C 13.30 -18.975 22.793 2.682 A C4' DG 1004 ATOM A C4' DG 1 4 1.00 1 C 13.49 -18.609 23.532 1.526 A O4' DG 1004 ATOM A O4' DG 1 4 1.00 1 O 16.11 -20.476 22.634 2.501 A C3' DG 1004 ATOM A C3' DG 1 4 1.00 1 C 21.40 -21.134 22.745 3.756 A O3' DG 1004 ATOM A O3' DG 1 4 1.00 1 O 7.61 -20.925 23.922 1.850 A C2' DG 1004 ATOM A C2' DG 1 4 1.00 1 C 12.75 -19.768 24.110 0.888 A C1' DG 1004 ATOM A C1' DG 1 4 1.00 1 C 8.63 -19.668 23.627 -0.532 A N9 DG 1004 ATOM A N9 DG 1 4 1.00 1 N 7.32 -19.157 22.405 -0.956 A C8 DG 1004 ATOM A C8 DG 1 4 1.00 1 C 4.94 -19.096 22.297 -2.258 A N7 DG 1004 ATOM A N7 DG 1 4 1.00 1 N 2.65 -19.613 23.545 -2.649 A C5 DG 1004 ATOM A C5 DG 1 4 1.00 1 C 6.47 -19.772 24.062 -3.944 A C6 DG 1004 ATOM A C6 DG 1 4 1.00 1 C 7.97 -19.442 23.460 -4.922 A O6 DG 1004 ATOM A O6 DG 1 4 1.00 1 O 2.26 -20.277 25.341 -4.041 A N1 DG 1004 ATOM A N1 DG 1 4 1.00 1 N 3.15 -20.652 26.048 -2.936 A C2 DG 1004 ATOM A C2 DG 1 4 1.00 1 C 7.79 -21.175 27.257 -3.123 A N2 DG 1004 ATOM A N2 DG 1 4 1.00 1 N 4.70 -20.470 25.614 -1.700 A N3 DG 1004 ATOM A N3 DG 1 4 1.00 1 N 3.47 -19.949 24.354 -1.640 A C4 DG 1004 ATOM A C4 DG 1 4 1.00 1 C 18.21 -22.451 21.891 3.973 A P DG 1005 ATOM A P DG 1 5 1.00 1 P 25.57 -22.698 22.182 5.391 A OP1 DG 1005 ATOM A OP1 DG 1 5 1.00 1 O 15.84 -22.142 20.535 3.535 A OP2 DG 1005 ATOM A OP2 DG 1 5 1.00 1 O 16.99 -23.600 22.600 3.180 A O5' DG 1005 ATOM A O5' DG 1 5 1.00 1 O 19.09 -23.988 23.825 3.710 A C5' DG 1005 ATOM A C5' DG 1 5 1.00 1 C 21.58 -24.730 24.596 2.656 A C4' DG 1005 ATOM A C4' DG 1 5 1.00 1 C 21.76 -23.905 24.745 1.451 A O4' DG 1005 ATOM A O4' DG 1 5 1.00 1 O 23.65 -25.988 23.859 2.271 A C3' DG 1005 ATOM A C3' DG 1 5 1.00 1 C 24.91 -27.148 24.688 2.420 A O3' DG 1005 ATOM A O3' DG 1 5 1.00 1 O 22.42 -25.720 23.313 0.851 A C2' DG 1005 ATOM A C2' DG 1 5 1.00 1 C 19.12 -24.666 24.289 0.336 A C1' DG 1005 ATOM A C1' DG 1 5 1.00 1 C 12.43 -23.998 23.706 -0.797 A N9 DG 1005 ATOM A N9 DG 1 5 1.00 1 N 11.34 -23.314 22.522 -0.823 A C8 DG 1005 ATOM A C8 DG 1 5 1.00 1 C 9.19 -22.870 22.260 -2.024 A N7 DG 1005 ATOM A N7 DG 1 5 1.00 1 N 6.19 -23.292 23.332 -2.802 A C5 DG 1005 ATOM A C5 DG 1 5 1.00 1 C 4.81 -23.100 23.520 -4.187 A C6 DG 1005 ATOM A C6 DG 1 5 1.00 1 C 11.16 -22.470 22.737 -4.837 A O6 DG 1005 ATOM A O6 DG 1 5 1.00 1 O 3.31 -23.615 24.636 -4.700 A N1 DG 1005 ATOM A N1 DG 1 5 1.00 1 N 6.90 -24.299 25.508 -3.899 A C2 DG 1005 ATOM A C2 DG 1 5 1.00 1 C 8.57 -24.774 26.590 -4.467 A N2 DG 1005 ATOM A N2 DG 1 5 1.00 1 N 10.16 -24.494 25.390 -2.589 A N3 DG 1005 ATOM A N3 DG 1 5 1.00 1 N 9.64 -23.965 24.235 -2.090 A C4 DG 1005 ATOM A C4 DG 1 5 1.00 1 C 23.51 -28.498 23.983 3.026 A P DT 1006 ATOM A P DT 1 6 1.00 1 P 15.12 -28.580 22.576 2.585 A OP1 DT 1006 ATOM A OP1 DT 1 6 1.00 1 O 25.10 -29.598 24.921 2.863 A OP2 DT 1006 ATOM A OP2 DT 1 6 1.00 1 O 24.67 -28.136 23.857 4.557 A O5' DT 1006 ATOM A O5' DT 1 6 1.00 1 O 27.49 -27.743 24.997 5.304 A C5' DT 1006 ATOM A C5' DT 1 6 1.00 1 C 26.60 -28.107 24.748 6.770 A C4' DT 1006 ATOM A C4' DT 1 6 1.00 1 C 25.69 -29.496 24.327 6.883 A O4' DT 1006 ATOM A O4' DT 1 6 1.00 1 O 25.42 -27.294 23.638 7.365 A C3' DT 1006 ATOM A C3' DT 1 6 1.00 1 C 25.26 -26.976 24.129 8.642 A O3' DT 1006 ATOM A O3' DT 1 6 1.00 1 O 21.30 -28.201 22.408 7.364 A C2' DT 1006 ATOM A C2' DT 1 6 1.00 1 C 21.28 -29.578 23.054 7.454 A C1' DT 1006 ATOM A C1' DT 1 6 1.00 1 C 20.86 -30.609 22.163 6.878 A N1 DT 1006 ATOM A N1 DT 1 6 1.00 1 N 21.09 -31.419 21.438 7.747 A C2 DT 1006 ATOM A C2 DT 1 6 1.00 1 C 19.79 -31.418 21.518 8.969 A O2 DT 1006 ATOM A O2 DT 1 6 1.00 1 O 17.15 -32.264 20.591 7.143 A N3 DT 1006 ATOM A N3 DT 1 6 1.00 1 N 16.38 -32.401 20.383 5.806 A C4 DT 1006 ATOM A C4 DT 1 6 1.00 1 C 17.42 -33.224 19.568 5.454 A O4 DT 1006 ATOM A O4 DT 1 6 1.00 1 O 18.77 -31.525 21.129 4.929 A C5 DT 1006 ATOM A C5 DT 1 6 1.00 1 C 19.67 -31.418 20.913 3.435 A C7 DT 1006 ATOM A C7 DT 1 6 1.00 1 C 22.17 -30.685 21.971 5.523 A C6 DT 1006 ATOM A C6 DT 1 6 1.00 1 C 26.97 -25.615 23.714 9.377 A P DT 1007 ATOM A P DT 1 7 1.00 1 P 23.29 -25.057 22.369 9.187 A OP1 DT 1007 ATOM A OP1 DT 1 7 1.00 1 O 27.53 -25.862 24.350 10.687 A OP2 DT 1007 ATOM A OP2 DT 1 7 1.00 1 O 23.92 -24.563 24.593 8.625 A O5' DT 1007 ATOM A O5' DT 1 7 1.00 1 O 22.10 -23.280 24.791 9.086 A C5' DT 1007 ATOM A C5' DT 1 7 1.00 1 C 20.82 -22.826 26.060 8.386 A C4' DT 1007 ATOM A C4' DT 1 7 1.00 1 C 25.03 -21.427 26.155 8.685 A O4' DT 1007 ATOM A O4' DT 1 7 1.00 1 O 19.37 -22.911 26.016 6.844 A C3' DT 1007 ATOM A C3' DT 1 7 1.00 1 C 20.31 -23.040 27.343 6.387 A O3' DT 1007 ATOM A O3' DT 1 7 1.00 1 O 18.27 -21.572 25.399 6.478 A C2' DT 1007 ATOM A C2' DT 1 7 1.00 1 C 20.68 -20.710 26.201 7.478 A C1' DT 1007 ATOM A C1' DT 1 7 1.00 1 C 17.09 -19.329 25.762 7.674 A N1 DT 1007 ATOM A N1 DT 1 7 1.00 1 N 14.67 -18.378 26.723 7.817 A C2 DT 1007 ATOM A C2 DT 1 7 1.00 1 C 18.95 -18.682 27.861 7.787 A O2 DT 1007 ATOM A O2 DT 1 7 1.00 1 O 11.38 -17.099 26.319 7.973 A N3 DT 1007 ATOM A N3 DT 1 7 1.00 1 N 13.08 -16.716 25.002 7.988 A C4 DT 1007 ATOM A C4 DT 1 7 1.00 1 C 14.92 -15.533 24.665 8.098 A O4 DT 1007 ATOM A O4 DT 1 7 1.00 1 O 14.22 -17.766 24.017 7.857 A C5 DT 1007 ATOM A C5 DT 1 7 1.00 1 C 13.87 -17.455 22.553 7.867 A C7 DT 1007 ATOM A C7 DT 1 7 1.00 1 C 16.96 -19.002 24.430 7.677 A C6 DT 1007 ATOM A C6 DT 1 7 1.00 1 C 19.60 -23.969 27.698 5.178 A P DA 1008 ATOM A P DA 1 8 1.00 1 P 18.83 -24.191 29.102 5.039 A OP1 DA 1008 ATOM A OP1 DA 1 8 1.00 1 O 23.17 -25.144 26.802 5.243 A OP2 DA 1008 ATOM A OP2 DA 1 8 1.00 1 O 20.60 -23.041 27.175 3.980 A O5' DA 1008 ATOM A O5' DA 1 8 1.00 1 O 18.93 -22.140 28.107 3.257 A C5' DA 1008 ATOM A C5' DA 1 8 1.00 1 C 15.05 -20.853 28.399 4.010 A C4' DA 1008 ATOM A C4' DA 1 8 1.00 1 C 18.46 -20.001 27.230 4.068 A O4' DA 1008 ATOM A O4' DA 1 8 1.00 1 O 16.11 -19.991 29.391 3.319 A C3' DA 1008 ATOM A C3' DA 1 8 1.00 1 C 16.44 -20.605 30.634 3.557 A O3' DA 1008 ATOM A O3' DA 1 8 1.00 1 O 14.30 -18.684 29.120 4.059 A C2' DA 1008 ATOM A C2' DA 1 8 1.00 1 C 16.78 -18.663 27.631 4.317 A C1' DA 1008 ATOM A C1' DA 1 8 1.00 1 C 13.64 -17.873 26.836 3.401 A N9 DA 1008 ATOM A N9 DA 1 8 1.00 1 N 12.66 -17.890 27.040 2.053 A C8 DA 1008 ATOM A C8 DA 1 8 1.00 1 C 10.96 -17.132 26.222 1.380 A N7 DA 1008 ATOM A N7 DA 1 8 1.00 1 N 13.29 -16.563 25.404 2.349 A C5 DA 1008 ATOM A C5 DA 1 8 1.00 1 C 12.28 -15.662 24.332 2.273 A C6 DA 1008 ATOM A C6 DA 1 8 1.00 1 C 14.83 -15.145 23.851 1.154 A N6 DA 1008 ATOM A N6 DA 1 8 1.00 1 N 15.45 -15.249 23.738 3.425 A N1 DA 1008 ATOM A N1 DA 1 8 1.00 1 N 11.17 -15.751 24.218 4.604 A C2 DA 1008 ATOM A C2 DA 1 8 1.00 1 C 13.50 -16.615 25.186 4.784 A N3 DA 1008 ATOM A N3 DA 1 8 1.00 1 N 13.33 -17.012 25.758 3.614 A C4 DA 1008 ATOM A C4 DA 1 8 1.00 1 C 23.57 -20.074 32.007 3.043 A P DG 1009 ATOM A P DG 1 9 1.00 1 P 22.77 -18.764 32.339 3.651 A OP1 DG 1009 ATOM A OP1 DG 1 9 1.00 1 O 15.74 -21.235 32.845 3.003 A OP2 DG 1009 ATOM A OP2 DG 1 9 1.00 1 O 23.39 -19.765 31.643 1.492 A O5' DG 1009 ATOM A O5' DG 1 9 1.00 1 O 19.43 -20.910 31.506 0.645 A C5' DG 1009 ATOM A C5' DG 1 9 1.00 1 C 14.05 -20.769 32.234 -0.637 A C4' DG 1009 ATOM A C4' DG 1 9 1.00 1 C 17.40 -19.498 31.912 -1.226 A O4' DG 1009 ATOM A O4' DG 1 9 1.00 1 O 16.02 -21.751 31.650 -1.621 A C3' DG 1009 ATOM A C3' DG 1 9 1.00 1 C 16.05 -22.963 32.341 -1.408 A O3' DG 1009 ATOM A O3' DG 1 9 1.00 1 O 12.60 -21.093 32.055 -2.928 A C2' DG 1009 ATOM A C2' DG 1 9 1.00 1 C 9.69 -19.621 31.842 -2.647 A C1' DG 1009 ATOM A C1' DG 1 9 1.00 1 C 8.64 -19.065 30.563 -3.041 A N9 DG 1009 ATOM A N9 DG 1 9 1.00 1 N 6.05 -18.477 29.663 -2.187 A C8 DG 1009 ATOM A C8 DG 1 9 1.00 1 C 5.14 -18.059 28.628 -2.787 A N7 DG 1009 ATOM A N7 DG 1 9 1.00 1 N 5.67 -18.338 28.891 -4.147 A C5 DG 1009 ATOM A C5 DG 1 9 1.00 1 C 7.97 -18.134 28.156 -5.360 A C6 DG 1009 ATOM A C6 DG 1 9 1.00 1 C 8.79 -17.591 27.051 -5.533 A O6 DG 1009 ATOM A O6 DG 1 9 1.00 1 O 9.08 -18.598 28.788 -6.535 A N1 DG 1009 ATOM A N1 DG 1 9 1.00 1 N 7.19 -19.225 29.975 -6.531 A C2 DG 1009 ATOM A C2 DG 1 9 1.00 1 C 10.27 -19.644 30.527 -7.667 A N2 DG 1009 ATOM A N2 DG 1 9 1.00 1 N 9.91 -19.394 30.648 -5.441 A N3 DG 1009 ATOM A N3 DG 1 9 1.00 1 N 4.53 -18.960 30.043 -4.309 A C4 DG 1009 ATOM A C4 DG 1 9 1.00 1 C 20.14 -24.343 31.829 -1.952 A P DG 1010 ATOM A P DG 1 10 1.00 1 P 18.26 -25.238 32.869 -1.546 A OP1 DG 1010 ATOM A OP1 DG 1 10 1.00 1 O 17.28 -24.555 30.371 -1.655 A OP2 DG 1010 ATOM A OP2 DG 1 10 1.00 1 O 19.49 -24.153 31.956 -3.532 A O5' DG 1010 ATOM A O5' DG 1 10 1.00 1 O 18.06 -24.397 33.162 -4.261 A C5' DG 1010 ATOM A C5' DG 1 10 1.00 1 C 18.79 -24.549 32.811 -5.751 A C4' DG 1010 ATOM A C4' DG 1 10 1.00 1 C 18.78 -23.309 32.211 -6.223 A O4' DG 1010 ATOM A O4' DG 1 10 1.00 1 O 20.11 -25.571 31.718 -6.063 A C3' DG 1010 ATOM A C3' DG 1 10 1.00 1 C 24.34 -26.906 32.234 -6.093 A O3' DG 1010 ATOM A O3' DG 1 10 1.00 1 O 18.44 -25.149 31.240 -7.433 A C2' DG 1010 ATOM A C2' DG 1 10 1.00 1 C 16.25 -23.634 31.349 -7.303 A C1' DG 1010 ATOM A C1' DG 1 10 1.00 1 C 11.41 -22.993 30.146 -6.908 A N9 DG 1010 ATOM A N9 DG 1 10 1.00 1 N 11.64 -22.694 29.856 -5.631 A C8 DG 1010 ATOM A C8 DG 1 10 1.00 1 C 9.31 -22.130 28.718 -5.475 A N7 DG 1010 ATOM A N7 DG 1 10 1.00 1 N 8.64 -22.004 28.266 -6.746 A C5 DG 1010 ATOM A C5 DG 1 10 1.00 1 C 7.14 -21.412 27.125 -7.225 A C6 DG 1010 ATOM A C6 DG 1 10 1.00 1 C 12.12 -20.837 26.215 -6.686 A O6 DG 1010 ATOM A O6 DG 1 10 1.00 1 O 10.70 -21.504 27.018 -8.610 A N1 DG 1010 ATOM A N1 DG 1 10 1.00 1 N 9.83 -22.067 27.920 -9.451 A C2 DG 1010 ATOM A C2 DG 1 10 1.00 1 C 15.97 -22.041 27.566 -10.749 A N2 DG 1010 ATOM A N2 DG 1 10 1.00 1 N 11.05 -22.635 29.007 -9.042 A N3 DG 1010 ATOM A N3 DG 1 10 1.00 1 N 11.33 -22.590 29.099 -7.668 A C4 DG 1010 ATOM A C4 DG 1 10 1.00 1 C 25.39 -28.126 31.252 -6.036 A P DG 1011 ATOM A P DG 1 11 1.00 1 P 26.44 -29.292 32.111 -5.852 A OP1 DG 1011 ATOM A OP1 DG 1 11 1.00 1 O 27.28 -27.837 30.030 -5.259 A OP2 DG 1011 ATOM A OP2 DG 1 11 1.00 1 O 30.14 -28.175 30.638 -7.490 A O5' DG 1011 ATOM A O5' DG 1 11 1.00 1 O 25.86 -28.564 31.412 -8.629 A C5' DG 1011 ATOM A C5' DG 1 11 1.00 1 C 25.23 -28.510 30.459 -9.808 A C4' DG 1011 ATOM A C4' DG 1 11 1.00 1 C 22.61 -27.245 29.750 -10.005 A O4' DG 1011 ATOM A O4' DG 1 11 1.00 1 O 26.66 -29.545 29.389 -9.786 A C3' DG 1011 ATOM A C3' DG 1 11 1.00 1 C 35.04 -29.948 29.466 -11.094 A O3' DG 1011 ATOM A O3' DG 1 11 1.00 1 O 21.39 -28.779 28.094 -9.599 A C2' DG 1011 ATOM A C2' DG 1 11 1.00 1 C 18.86 -27.375 28.358 -10.082 A C1' DG 1011 ATOM A C1' DG 1 11 1.00 1 C 15.19 -26.459 27.631 -9.202 A N9 DG 1011 ATOM A N9 DG 1 11 1.00 1 N 12.73 -26.341 27.788 -7.835 A C8 DG 1011 ATOM A C8 DG 1 11 1.00 1 C 9.41 -25.525 26.984 -7.247 A N7 DG 1011 ATOM A N7 DG 1 11 1.00 1 N 10.80 -25.049 26.217 -8.305 A C5 DG 1011 ATOM A C5 DG 1 11 1.00 1 C 12.35 -24.104 25.202 -8.310 A C6 DG 1011 ATOM A C6 DG 1 11 1.00 1 C 17.67 -23.410 24.627 -7.382 A O6 DG 1011 ATOM A O6 DG 1 11 1.00 1 O 13.32 -23.981 24.727 -9.628 A N1 DG 1011 ATOM A N1 DG 1 11 1.00 1 N 12.47 -24.599 25.191 -10.773 A C2 DG 1011 ATOM A C2 DG 1 11 1.00 1 C 11.74 -24.271 24.614 -11.955 A N2 DG 1011 ATOM A N2 DG 1 11 1.00 1 N 10.95 -25.462 26.166 -10.747 A N3 DG 1011 ATOM A N3 DG 1 11 1.00 1 N 9.57 -25.632 26.612 -9.500 A C4 DG 1011 ATOM A C4 DG 1 11 1.00 1 C 36.44 -31.460 29.526 -11.551 A P DT 1012 ATOM A P DT 1 12 1.00 1 P 37.86 -32.065 30.765 -11.009 A OP1 DT 1012 ATOM A OP1 DT 1 12 1.00 1 O 35.58 -32.064 28.213 -11.270 A OP2 DT 1012 ATOM A OP2 DT 1 12 1.00 1 O 34.69 -31.141 29.732 -13.102 A O5' DT 1012 ATOM A O5' DT 1 12 1.00 1 O 14.52 -25.677 30.604 -12.183 A NA NA 4 HETATM B NA NA 2 1.00 1 NA 12.49 -21.196 23.161 -7.259 A K K 30 HETATM C K K 3 0.50 1 K 15.07 -18.150 24.747 -7.311 A K K 31 HETATM D K K 3 0.50 1 K 14.62 -15.327 26.546 -7.271 A K K 32 HETATM E K K 3 0.25 1 K 32.32 -26.346 17.500 -0.091 A O6 NII 1 HETATM F O6 NII 4 0.50 1 O 32.23 -26.792 18.413 -1.101 A C30 NII 1 HETATM F C30 NII 4 0.50 1 C 28.48 -25.858 18.381 -2.313 A C29 NII 1 HETATM F C29 NII 4 0.50 1 C 24.32 -24.846 19.537 -2.482 A C28 NII 1 HETATM F C28 NII 4 0.50 1 C 23.96 -24.524 19.125 -3.827 A N3 NII 1 HETATM F N3 NII 4 0.50 1 N 23.30 -24.816 19.667 -5.038 A C9 NII 1 HETATM F C9 NII 4 0.50 1 C 22.02 -24.323 18.826 -5.969 A C8 NII 1 HETATM F C8 NII 4 0.50 1 C 22.71 -24.454 19.140 -7.288 A C7 NII 1 HETATM F C7 NII 4 0.50 1 C 23.38 -23.941 18.223 -8.133 A C14 NII 1 HETATM F C14 NII 4 0.50 1 C 24.25 -23.404 17.194 -7.654 A O1 NII 1 HETATM F O1 NII 4 0.50 1 O 23.25 -24.027 18.396 -9.432 A N2 NII 1 HETATM F N2 NII 4 0.50 1 N 23.94 -23.437 17.313 -10.244 A C18 NII 1 HETATM F C18 NII 4 0.50 1 C 25.40 -22.902 16.186 -9.351 A C19 NII 1 HETATM F C19 NII 4 0.50 1 C 28.34 -22.541 14.913 -10.128 A C20 NII 1 HETATM F C20 NII 4 0.50 1 C 28.78 -21.272 14.320 -9.640 A N5 NII 1 HETATM F N5 NII 4 0.50 1 N 29.25 -21.501 13.584 -8.389 A C24 NII 1 HETATM F C24 NII 4 0.50 1 C 29.55 -20.754 13.375 -10.649 A C23 NII 1 HETATM F C23 NII 4 0.50 1 C 23.70 -24.628 19.491 -9.960 A C13 NII 1 HETATM F C13 NII 4 0.50 1 C 24.43 -24.664 19.578 -11.214 A O4 NII 1 HETATM F O4 NII 4 0.50 1 O 23.47 -25.449 20.855 -5.453 A C10 NII 1 HETATM F C10 NII 4 0.50 1 C 23.86 -25.967 21.755 -4.557 A C11 NII 1 HETATM F C11 NII 4 0.50 1 C 24.03 -25.821 21.450 -3.356 A O2 NII 1 HETATM F O2 NII 4 0.50 1 O 23.26 -26.585 22.889 -4.959 A N1 NII 1 HETATM F N1 NII 4 0.50 1 N 24.27 -27.139 23.806 -3.934 A C15 NII 1 HETATM F C15 NII 4 0.50 1 C 28.81 -27.578 25.169 -4.486 A C16 NII 1 HETATM F C16 NII 4 0.50 1 C 32.08 -29.079 25.434 -4.370 A C17 NII 1 HETATM F C17 NII 4 0.50 1 C 33.47 -29.386 26.645 -5.155 A N4 NII 1 HETATM F N4 NII 4 0.50 1 N 33.26 -29.792 26.259 -6.515 A C21 NII 1 HETATM F C21 NII 4 0.50 1 C 35.49 -30.457 27.433 -4.517 A C22 NII 1 HETATM F C22 NII 4 0.50 1 C 23.39 -25.585 21.156 -6.812 A C5 NII 1 HETATM F C5 NII 4 0.50 1 C 22.53 -26.215 22.316 -7.222 A C6 NII 1 HETATM F C6 NII 4 0.50 1 C 23.10 -26.715 23.178 -6.257 A C12 NII 1 HETATM F C12 NII 4 0.50 1 C 23.96 -27.314 24.231 -6.576 A O3 NII 1 HETATM F O3 NII 4 0.50 1 O 23.38 -25.081 20.273 -7.757 A C4 NII 1 HETATM F C4 NII 4 0.50 1 C 23.47 -25.191 20.493 -9.133 A C3 NII 1 HETATM F C3 NII 4 0.50 1 C 23.29 -25.859 21.681 -9.525 A C2 NII 1 HETATM F C2 NII 4 0.50 1 C 21.94 -26.355 22.564 -8.575 A C1 NII 1 HETATM F C1 NII 4 0.50 1 C 24.23 -26.121 22.184 -10.752 A N6 NII 1 HETATM F N6 NII 4 0.50 1 N 24.33 -25.849 21.686 -12.074 A C25 NII 1 HETATM F C25 NII 4 0.50 1 C 28.25 -27.240 21.922 -12.663 A C26 NII 1 HETATM F C26 NII 4 0.50 1 C 31.26 -27.701 20.751 -13.529 A C27 NII 1 HETATM F C27 NII 4 0.50 1 C 30.07 -27.406 20.984 -14.913 A O5 NII 1 HETATM F O5 NII 4 0.50 1 O 39.84 -10.792 31.621 11.660 A O6 NII 2 HETATM G O6 NII 4 0.50 1 O 40.44 -9.632 30.793 11.713 A C30 NII 2 HETATM G C30 NII 4 0.50 1 C 40.45 -10.005 29.312 11.691 A C29 NII 2 HETATM G C29 NII 4 0.50 1 C 38.81 -11.449 29.175 11.237 A C28 NII 2 HETATM G C28 NII 4 0.50 1 C 38.84 -11.754 27.760 11.258 A N3 NII 2 HETATM G N3 NII 4 0.50 1 N 38.50 -13.069 27.471 11.264 A C9 NII 2 HETATM G C9 NII 4 0.50 1 C 38.32 -13.904 28.574 11.270 A C8 NII 2 HETATM G C8 NII 4 0.50 1 C 38.02 -15.272 28.393 11.276 A C7 NII 2 HETATM G C7 NII 4 0.50 1 C 38.74 -16.077 29.506 11.278 A C14 NII 2 HETATM G C14 NII 4 0.50 1 C 39.00 -15.508 30.629 11.263 A O1 NII 2 HETATM G O1 NII 4 0.50 1 O 38.88 -17.418 29.359 11.298 A N2 NII 2 HETATM G N2 NII 4 0.50 1 N 38.98 -18.313 30.532 11.293 A C18 NII 2 HETATM G C18 NII 4 0.50 1 C 40.61 -18.983 30.689 9.917 A C19 NII 2 HETATM G C19 NII 4 0.50 1 C 41.17 -18.705 32.060 9.293 A C20 NII 2 HETATM G C20 NII 4 0.50 1 C 42.47 -18.124 32.015 7.930 A N5 NII 2 HETATM G N5 NII 4 0.50 1 N 42.25 -17.021 31.043 7.849 A C24 NII 2 HETATM G C24 NII 4 0.50 1 C 41.34 -19.147 31.728 6.901 A C23 NII 2 HETATM G C23 NII 4 0.50 1 C 38.84 -17.979 28.136 11.309 A C13 NII 2 HETATM G C13 NII 4 0.50 1 C 39.37 -19.233 28.077 11.333 A O4 NII 2 HETATM G O4 NII 4 0.50 1 O 38.24 -13.605 26.171 11.275 A C10 NII 2 HETATM G C10 NII 4 0.50 1 C 38.81 -12.822 25.012 11.274 A C11 NII 2 HETATM G C11 NII 4 0.50 1 C 39.41 -11.571 25.082 11.270 A O2 NII 2 HETATM G O2 NII 4 0.50 1 O 38.86 -13.387 23.790 11.288 A N1 NII 2 HETATM G N1 NII 4 0.50 1 N 38.95 -12.501 22.609 11.281 A C15 NII 2 HETATM G C15 NII 4 0.50 1 C 40.36 -11.852 22.413 9.901 A C16 NII 2 HETATM G C16 NII 4 0.50 1 C 40.41 -12.600 21.378 9.065 A C17 NII 2 HETATM G C17 NII 4 0.50 1 C 41.73 -12.110 21.386 7.673 A N4 NII 2 HETATM G N4 NII 4 0.50 1 N 41.38 -11.671 20.038 7.260 A C21 NII 2 HETATM G C21 NII 4 0.50 1 C 41.31 -13.207 21.807 6.794 A C22 NII 2 HETATM G C22 NII 4 0.50 1 C 37.54 -14.988 26.015 11.288 A C5 NII 2 HETATM G C5 NII 4 0.50 1 C 38.10 -15.547 24.747 11.300 A C6 NII 2 HETATM G C6 NII 4 0.50 1 C 38.71 -14.732 23.641 11.298 A C12 NII 2 HETATM G C12 NII 4 0.50 1 C 38.91 -15.303 22.519 11.308 A O3 NII 2 HETATM G O3 NII 4 0.50 1 O 37.55 -15.819 27.123 11.290 A C4 NII 2 HETATM G C4 NII 4 0.50 1 C 38.21 -17.200 26.971 11.306 A C3 NII 2 HETATM G C3 NII 4 0.50 1 C 38.50 -17.759 25.680 11.322 A C2 NII 2 HETATM G C2 NII 4 0.50 1 C 38.21 -16.928 24.566 11.323 A C1 NII 2 HETATM G C1 NII 4 0.50 1 C 38.78 -19.106 25.503 11.345 A N6 NII 2 HETATM G N6 NII 4 0.50 1 N 38.97 -19.722 24.190 11.356 A C25 NII 2 HETATM G C25 NII 4 0.50 1 C 40.00 -20.867 24.323 12.361 A C26 NII 2 HETATM G C26 NII 4 0.50 1 C 40.92 -21.647 23.011 12.511 A C27 NII 2 HETATM G C27 NII 4 0.50 1 C 41.02 -20.802 21.918 12.879 A O5 NII 2 HETATM G O5 NII 4 0.50 1 O 35.33 -8.316 25.804 16.687 A O6 NII 3 HETATM H O6 NII 4 0.25 1 O 34.89 -9.139 24.650 16.535 A C30 NII 3 HETATM H C30 NII 4 0.25 1 C 33.77 -9.619 24.505 15.090 A C29 NII 3 HETATM H C29 NII 4 0.25 1 C 32.02 -10.683 25.547 14.769 A C28 NII 3 HETATM H C28 NII 4 0.25 1 C 31.77 -11.968 24.857 14.785 A N3 NII 3 HETATM H N3 NII 4 0.25 1 N 31.41 -13.108 25.586 14.704 A C9 NII 3 HETATM H C9 NII 4 0.25 1 C 31.68 -12.974 26.966 14.609 A C8 NII 3 HETATM H C8 NII 4 0.25 1 C 31.50 -14.093 27.778 14.517 A C7 NII 3 HETATM H C7 NII 4 0.25 1 C 31.75 -13.953 29.151 14.423 A C14 NII 3 HETATM H C14 NII 4 0.25 1 C 31.78 -12.806 29.653 14.418 A O1 NII 3 HETATM H O1 NII 4 0.25 1 O 31.77 -15.056 29.912 14.330 A N2 NII 3 HETATM H N2 NII 4 0.25 1 N 32.05 -14.967 31.369 14.247 A C18 NII 3 HETATM H C18 NII 4 0.25 1 C 33.92 -14.416 31.938 12.946 A C19 NII 3 HETATM H C19 NII 4 0.25 1 C 35.53 -14.222 33.447 13.138 A C20 NII 3 HETATM H C20 NII 4 0.25 1 C 35.68 -13.519 33.739 14.411 A N5 NII 3 HETATM H N5 NII 4 0.25 1 N 36.55 -12.331 34.575 14.159 A C24 NII 3 HETATM H C24 NII 4 0.25 1 C 36.69 -14.398 34.425 15.382 A C23 NII 3 HETATM H C23 NII 4 0.25 1 C 31.68 -16.292 29.386 14.349 A C13 NII 3 HETATM H C13 NII 4 0.25 1 C 31.89 -17.275 30.154 14.267 A O4 NII 3 HETATM H O4 NII 4 0.25 1 O 31.49 -14.392 25.005 14.734 A C10 NII 3 HETATM H C10 NII 4 0.25 1 C 31.64 -14.609 23.636 14.801 A C11 NII 3 HETATM H C11 NII 4 0.25 1 C 31.84 -13.632 22.867 14.883 A O2 NII 3 HETATM H O2 NII 4 0.25 1 O 31.92 -15.850 23.102 14.800 A N1 NII 3 HETATM H N1 NII 4 0.25 1 N 32.32 -15.999 21.636 14.920 A C15 NII 3 HETATM H C15 NII 4 0.25 1 C 36.13 -16.697 21.018 13.712 A C16 NII 3 HETATM H C16 NII 4 0.25 1 C 38.63 -16.214 19.593 13.431 A C17 NII 3 HETATM H C17 NII 4 0.25 1 C 40.36 -17.056 18.560 14.077 A N4 NII 3 HETATM H N4 NII 4 0.25 1 N 41.00 -18.277 18.291 13.289 A C21 NII 3 HETATM H C21 NII 4 0.25 1 C 41.06 -16.295 17.297 14.197 A C22 NII 3 HETATM H C22 NII 4 0.25 1 C 30.89 -15.507 25.846 14.619 A C5 NII 3 HETATM H C5 NII 4 0.25 1 C 31.54 -16.776 25.273 14.627 A C6 NII 3 HETATM H C6 NII 4 0.25 1 C 31.80 -16.933 23.896 14.721 A C12 NII 3 HETATM H C12 NII 4 0.25 1 C 31.80 -18.094 23.430 14.729 A O3 NII 3 HETATM H O3 NII 4 0.25 1 O 30.95 -15.362 27.216 14.527 A C4 NII 3 HETATM H C4 NII 4 0.25 1 C 31.55 -16.490 28.005 14.448 A C3 NII 3 HETATM H C3 NII 4 0.25 1 C 31.49 -17.768 27.446 14.454 A C2 NII 3 HETATM H C2 NII 4 0.25 1 C 31.66 -17.906 26.069 14.546 A C1 NII 3 HETATM H C1 NII 4 0.25 1 C 31.90 -18.879 28.217 14.368 A N6 NII 3 HETATM H N6 NII 4 0.25 1 N 32.12 -20.218 27.641 14.372 A C25 NII 3 HETATM H C25 NII 4 0.25 1 C 34.35 -21.076 28.652 15.125 A C26 NII 3 HETATM H C26 NII 4 0.25 1 C 35.72 -22.020 27.962 16.111 A C27 NII 3 HETATM H C27 NII 4 0.25 1 C 36.66 -22.892 28.909 16.724 A O5 NII 3 HETATM H O5 NII 4 0.25 1 O 16.61 -15.986 17.482 -3.558 A O HOH 1013 HETATM I O HOH 5 1.00 1 O 17.36 -20.485 27.881 0.089 A O HOH 1014 HETATM I O HOH 5 1.00 1 O 20.27 -18.330 17.586 -1.716 A O HOH 1015 HETATM I O HOH 5 1.00 1 O 26.04 -16.402 31.847 4.131 A O HOH 1016 HETATM I O HOH 5 1.00 1 O 18.76 -26.148 29.012 -3.276 A O HOH 1017 HETATM I O HOH 5 1.00 1 O 20.26 -10.431 19.435 -5.677 A O HOH 1018 HETATM I O HOH 5 1.00 1 O 18.05 -20.903 32.709 -9.279 A O HOH 1019 HETATM I O HOH 5 1.00 1 O 19.34 -26.439 32.418 -11.678 A O HOH 1020 HETATM I O HOH 5 1.00 1 O 30.46 -27.380 26.442 -1.419 A O HOH 1021 HETATM I O HOH 5 1.00 1 O 22.02 -21.159 21.883 7.275 A O HOH 1022 HETATM I O HOH 5 1.00 1 O 23.26 -23.387 28.552 -0.785 A O HOH 1023 HETATM I O HOH 5 1.00 1 O 26.71 -15.665 19.561 5.284 A O HOH 1024 HETATM I O HOH 5 1.00 1 O 29.47 -26.210 27.808 8.006 A O HOH 1025 HETATM I O HOH 5 1.00 1 O 20.21 -27.588 21.011 3.304 A O HOH 1026 HETATM I O HOH 5 1.00 1 O 32.56 -18.778 35.198 3.795 A O HOH 1027 HETATM I O HOH 5 1.00 1 O 25.94 -6.023 19.079 -10.145 A O HOH 1028 HETATM I O HOH 5 1.00 1 O 32.56 -30.499 19.045 11.435 A O HOH 1029 HETATM I O HOH 5 1.00 1 O 26.08 -21.784 34.950 1.817 A O HOH 1030 HETATM I O HOH 5 1.00 1 O 31.47 -23.169 20.999 9.716 A O HOH 1031 HETATM I O HOH 5 1.00 1 O 31.30 -25.383 28.232 0.945 A O HOH 1032 HETATM I O HOH 5 1.00 1 O 27.73 -25.120 21.273 6.437 A O HOH 1033 HETATM I O HOH 5 1.00 1 O 21.81 -25.360 24.894 -14.755 A O HOH 1034 HETATM I O HOH 5 1.00 1 O 35.62 -27.949 29.154 -0.962 A O HOH 1035 HETATM I O HOH 5 1.00 1 O 29.28 -28.992 29.070 7.547 A O HOH 1036 HETATM I O HOH 5 1.00 1 O 42.00 -22.859 31.089 7.326 A O HOH 1037 HETATM I O HOH 5 1.00 1 O 31.60 -29.119 21.938 -0.191 A O HOH 1038 HETATM I O HOH 5 1.00 1 O 35.45 -32.546 26.075 -11.074 A O HOH 1039 HETATM I O HOH 5 1.00 1 O 35.96 -30.763 24.525 -10.506 A O HOH 1040 HETATM I O HOH 5 1.00 1 O 0.016300 0.009411 0.000000 0.000000 0.018822 0.000000 0.000000 0.000000 0.022920 0.00000 0.00000 0.00000 Parkinson, G.N. Neidle, S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 61.350 61.350 43.630 C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking H2 O 18.015 WATER non-polymer K 1 39.098 POTASSIUM ION non-polymer Na 1 22.990 SODIUM ION non-polymer C30 H42 N6 O6 582.691 2,7-bis[3-(dimethylamino)propyl]-4,9-bis[(3-hydroxypropyl)amino]benzo[lmn][3,8]phenanthroline-1,3,6,8(2H,7H)-tetrone non-polymer N 1 N O N 2 N P N 3 N O N 4 N O N 5 N O N 6 N C N 7 R C N 8 N O N 9 S C N 10 N O N 11 N C N 12 R C Y 13 N N Y 14 N C Y 15 N N Y 16 N C Y 17 N C N 18 N N Y 19 N N Y 20 N C Y 21 N N Y 22 N C N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N O N 38 N P N 39 N O N 40 N O N 41 N O N 42 N C N 43 R C N 44 N O N 45 S C N 46 N O N 47 N C N 48 R C Y 49 N N Y 50 N C Y 51 N N Y 52 N C N 53 N C N 54 N O N 55 N N N 56 N C N 57 N N N 58 N N Y 59 N C N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N O N 75 N P N 76 N O N 77 N O N 78 N O N 79 N C N 80 R C N 81 N O N 82 S C N 83 N O N 84 N C N 85 R C N 86 N N N 87 N C N 88 N O N 89 N N N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N O N 111 N H N 112 N H N 113 N K N 114 N NA N 115 N O N 116 N C N 117 N C N 118 N C N 119 N N Y 120 N C Y 121 N C Y 122 N C N 123 N C N 124 N O N 125 N N N 126 N C N 127 N C N 128 N C N 129 N N N 130 N C N 131 N C N 132 N C N 133 N O Y 134 N C N 135 N C N 136 N O N 137 N N N 138 N C N 139 N C N 140 N C N 141 N N N 142 N C N 143 N C Y 144 N C Y 145 N C N 146 N C N 147 N O Y 148 N C Y 149 N C Y 150 N C Y 151 N C N 152 N N N 153 N C N 154 N C N 155 N C N 156 N O N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing Y 24 N sing Y 25 N sing Y 26 N doub N 27 N sing Y 28 N sing Y 29 N sing Y 30 N doub N 31 N sing Y 32 N doub N 33 N sing N 34 N sing Y 35 N sing Y 36 N doub N 37 N sing Y 38 N sing N 39 N sing N 40 N sing N 41 N doub N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing Y 62 N sing Y 63 N sing Y 64 N doub N 65 N sing Y 66 N sing N 67 N sing Y 68 N doub N 69 N doub N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N doub N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N doub N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N doub N 108 N sing N 109 N sing N 110 N doub N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing Y 122 N sing Y 123 N doub Y 124 N doub N 125 N sing Y 126 N sing N 127 N doub N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N doub N 137 N sing N 138 N sing Y 139 N sing N 140 N doub N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing Y 149 N doub Y 150 N sing N 151 N sing Y 152 N sing N 153 N doub Y 154 N doub Y 155 N sing Y 156 N doub N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing UK J.Mol.Biol. JMOBAK 0070 0022-2836 381 1145 1156 10.1016/j.jmb.2008.06.022 18619463 Topology conservation and loop flexibility in quadruplex-drug recognition: crystal structures of inter- and intramolecular telomeric DNA quadruplex-drug complexes 2008 10.2210/pdb3cco/pdb pdb_00003cco 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 MONOCHROMATOR CCD 2007-10-07 ADSC QUANTUM 210 Si 111 CHANNEL SINGLE WAVELENGTH M x-ray 1 0.9785 1.0 ID14-1 ESRF 0.9785 SYNCHROTRON ESRF BEAMLINE ID14-1 3773.462 DNA (5'-D(*DTP*DAP*DGP*DGP*DGP*DTP*DTP*DAP*DGP*DGP*DGP*DT)-3') 1 syn polymer 22.990 SODIUM ION 1 syn non-polymer 39.098 POTASSIUM ION 3 syn non-polymer 582.691 2,7-bis[3-(dimethylamino)propyl]-4,9-bis[(3-hydroxypropyl)amino]benzo[lmn][3,8]phenanthroline-1,3,6,8(2H,7H)-tetrone 3 syn non-polymer 18.015 water 28 nat water TELOMERE REPEAT SEQUENCE no no (DT)(DA)(DG)(DG)(DG)(DT)(DT)(DA)(DG)(DG)(DG)(DT) TAGGGTTAGGGT A polydeoxyribonucleotide n n n n n n n n n n n n 2 3.14 60.84 VAPOR DIFFUSION, HANGING DROP 6.5 300mM sodium chloride, 50mM sodium cacodylate pH 6.5, 30% v/v MPD, VAPOR DIFFUSION, HANGING DROP, temperature 283K 283 sodium chloride 1 sodium cacodylate 1 MPD 1 HOH 1 sodium chloride 2 sodium cacodylate 2 MPD 2 HOH 2 13.058 6 A 1003 A 1009 -92.575 A_DG1003:DG1009_A 1 -0.300 1.522 -0.550 3.394 5.372 6 A 1004 A 1010 -91.427 A_DG1004:DG1010_A 2 -6.757 1.855 -0.199 3.201 11.220 6 A 1005 A 1011 -91.436 A_DG1005:DG1011_A 3 -20.117 1.688 -0.280 3.266 3.343 36.566 A A 1003 1004 2.157 A A 1009 1010 3.381 1.353 -0.196 -1.127 AA_DG1003DG1004:DG1010DG1009_AA 1 -1.400 2.232 36.516 -1.988 0.114 2.336 21.934 A A 1004 1005 23.290 A A 1010 1011 3.032 8.483 -0.329 -0.548 AA_DG1004DG1005:DG1011DG1010_AA 2 6.705 -18.409 19.112 -4.327 3.147 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_conn_angle pdbx_struct_special_symmetry struct_conn struct_ref_seq struct_site repository Initial release Version format compliance Data collection Database references Derived calculations Refinement description 1 0 2008-09-23 1 1 2011-07-13 1 2 2023-11-01 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Human Telomeric Sequence bound to same ligand RCSB Y PDBJ 2008-02-26 REL REL NA SODIUM ION K POTASSIUM ION NII 2,7-bis[3-(dimethylamino)propyl]-4,9-bis[(3-hydroxypropyl)amino]benzo[lmn][3,8]phenanthroline-1,3,6,8(2H,7H)-tetrone HOH water THIS SEQUENCE OCCURS NATURALLY IN HUMANS sample 1KF1 PDB ENTRY 1KF1 PDB experimental model NA 1 2 NA NA 4 A K 30 3 K K 30 A K 31 3 K K 31 A K 32 3 K K 32 A P10 1 4 NII NII 1 A P10 2 4 NII NII 2 A P10 3 4 NII NII 3 A HOH 2 5 HOH HOH 1013 A HOH 3 5 HOH HOH 1014 A HOH 4 5 HOH HOH 1015 A HOH 5 5 HOH HOH 1016 A HOH 6 5 HOH HOH 1017 A HOH 7 5 HOH HOH 1018 A HOH 8 5 HOH HOH 1019 A HOH 9 5 HOH HOH 1020 A HOH 10 5 HOH HOH 1021 A HOH 11 5 HOH HOH 1022 A HOH 12 5 HOH HOH 1023 A HOH 13 5 HOH HOH 1024 A HOH 14 5 HOH HOH 1025 A HOH 15 5 HOH HOH 1026 A HOH 16 5 HOH HOH 1027 A HOH 17 5 HOH HOH 1028 A HOH 18 5 HOH HOH 1029 A HOH 19 5 HOH HOH 1030 A HOH 20 5 HOH HOH 1031 A HOH 21 5 HOH HOH 1032 A HOH 22 5 HOH HOH 1033 A HOH 23 5 HOH HOH 1034 A HOH 24 5 HOH HOH 1035 A HOH 25 5 HOH HOH 1036 A HOH 26 5 HOH HOH 1037 A HOH 27 5 HOH HOH 1038 A HOH 28 5 HOH HOH 1039 A HOH 29 5 HOH HOH 1040 A T 1001 n 1 DT 1001 A A 1002 n 2 DA 1002 A G 1003 n 3 DG 1003 A G 1004 n 4 DG 1004 A G 1005 n 5 DG 1005 A T 1006 n 6 DT 1006 A T 1007 n 7 DT 1007 A A 1008 n 8 DA 1008 A G 1009 n 9 DG 1009 A G 1010 n 10 DG 1010 A G 1011 n 11 DG 1011 A T 1012 n 12 DT 1012 A author_and_software_defined_assembly PISA 2 dimeric 880 -25 4250 A DG 1004 A O6 DG 4 1_555 A K 30 C K K 1_555 A DG 1005 A O6 DG 5 1_555 66.1 A DG 1004 A O6 DG 4 1_555 A K 30 C K K 1_555 A DG 1011 A O6 DG 11 1_555 118.6 A DG 1005 A O6 DG 5 1_555 A K 30 C K K 1_555 A DG 1011 A O6 DG 11 1_555 75.0 A DG 1003 A O6 DG 3 1_555 A K 31 D K K 1_555 A DG 1009 A O6 DG 9 1_555 66.6 A DG 1003 A O6 DG 3 1_555 A K 32 E K K 1_555 A DG 1009 A O6 DG 9 1_555 67.5 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.5000000000 0.8660254038 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 12_564 x,x-y+1,-z-1/3 crystal symmetry operation -30.6750000000 53.1306585222 -14.5433333333 1 A K 30 C K 1 A K 31 D K 1 A K 32 E K 1 A NII 3 H NII 1 A O5' DT 1001 A O5' DT 1 1 Y 1 A C5' DT 1001 A C5' DT 1 1 Y 1 A C4' DT 1001 A C4' DT 1 1 Y 1 A O4' DT 1001 A O4' DT 1 1 Y 1 A C3' DT 1001 A C3' DT 1 1 Y 1 A C2' DT 1001 A C2' DT 1 1 Y 1 A C1' DT 1001 A C1' DT 1 1 Y 1 A N1 DT 1001 A N1 DT 1 1 Y 1 A C2 DT 1001 A C2 DT 1 1 Y 1 A O2 DT 1001 A O2 DT 1 1 Y 1 A N3 DT 1001 A N3 DT 1 1 Y 1 A C4 DT 1001 A C4 DT 1 1 Y 1 A O4 DT 1001 A O4 DT 1 1 Y 1 A C5 DT 1001 A C5 DT 1 1 Y 1 A C7 DT 1001 A C7 DT 1 1 Y 1 A C6 DT 1001 A C6 DT 1 1 Y 1 A C5' DT 1012 A C5' DT 12 1 Y 1 A C4' DT 1012 A C4' DT 12 1 Y 1 A O4' DT 1012 A O4' DT 12 1 Y 1 A C3' DT 1012 A C3' DT 12 1 Y 1 A O3' DT 1012 A O3' DT 12 1 Y 1 A C2' DT 1012 A C2' DT 12 1 Y 1 A C1' DT 1012 A C1' DT 12 1 Y 1 A N1 DT 1012 A N1 DT 12 1 Y 1 A C2 DT 1012 A C2 DT 12 1 Y 1 A O2 DT 1012 A O2 DT 12 1 Y 1 A N3 DT 1012 A N3 DT 12 1 Y 1 A C4 DT 1012 A C4 DT 12 1 Y 1 A O4 DT 1012 A O4 DT 12 1 Y 1 A C5 DT 1012 A C5 DT 12 1 Y 1 A C7 DT 1012 A C7 DT 12 1 Y 1 A C6 DT 1012 A C6 DT 12 1 Y 1 A A OP1 O DT HOH 1006 1026 1.99 1 -3.63 0.40 104.50 100.87 A A A O4' C4' C3' DA DA DA 1002 1002 1002 N 1 -5.61 0.80 105.90 100.29 A A A O4' C1' C2' DG DG DG 1003 1003 1003 N 1 8.26 0.30 108.30 116.56 A A A O4' C1' N9 DG DG DG 1003 1003 1003 N 1 3.31 0.50 111.90 115.21 A A A C2 N3 C4 DG DG DG 1003 1003 1003 N 1 -3.94 0.60 118.80 114.86 A A A C4 C5 C6 DG DG DG 1003 1003 1003 N 1 6.22 0.50 111.50 117.72 A A A C5 C6 N1 DG DG DG 1003 1003 1003 N 1 3.52 0.40 110.80 114.32 A A A C4 C5 N7 DG DG DG 1003 1003 1003 N 1 -3.04 0.50 104.30 101.26 A A A C5 N7 C8 DG DG DG 1003 1003 1003 N 1 -6.82 0.60 119.90 113.08 A A A N1 C6 O6 DG DG DG 1003 1003 1003 N 1 13.30 1.40 114.30 127.60 A A A N9 C1' C2' DG DG DG 1004 1004 1004 N 1 -4.38 0.70 108.00 103.62 A A A O4' C1' N9 DG DG DG 1004 1004 1004 N 1 5.13 0.50 111.50 116.63 A A A C5 C6 N1 DG DG DG 1004 1004 1004 N 1 4.02 0.40 110.80 114.82 A A A C4 C5 N7 DG DG DG 1004 1004 1004 N 1 -3.56 0.50 104.30 100.74 A A A C5 N7 C8 DG DG DG 1004 1004 1004 N 1 -6.03 0.60 128.60 122.57 A A A C5 C6 O6 DG DG DG 1004 1004 1004 N 1 11.57 0.30 108.30 119.87 A A A O4' C1' N9 DG DG DG 1005 1005 1005 N 1 -4.96 0.60 125.10 120.14 A A A C6 N1 C2 DG DG DG 1005 1005 1005 N 1 -3.58 0.50 128.60 125.02 A A A N3 C4 C5 DG DG DG 1005 1005 1005 N 1 4.42 0.50 111.50 115.92 A A A C5 C6 N1 DG DG DG 1005 1005 1005 N 1 4.50 0.60 126.00 130.50 A A A N3 C4 N9 DG DG DG 1005 1005 1005 N 1 -7.43 0.60 128.60 121.17 A A A C5 C6 O6 DG DG DG 1005 1005 1005 N 1 7.19 0.30 108.30 115.49 A A A O4' C1' N1 DT DT DT 1006 1006 1006 N 1 5.59 0.60 119.00 124.59 A A A C4 C5 C7 DT DT DT 1006 1006 1006 N 1 -3.77 0.60 122.90 119.13 A A A C6 C5 C7 DT DT DT 1006 1006 1006 N 1 9.56 1.10 110.50 120.06 A A A O3' P OP1 DT DT DT 1006 1007 1007 Y 1 -5.26 0.80 109.40 104.14 A A A O5' C5' C4' DT DT DT 1007 1007 1007 N 1 -5.22 0.80 102.40 97.18 A A A C3' C2' C1' DT DT DT 1007 1007 1007 N 1 2.62 0.30 108.30 110.92 A A A O4' C1' N1 DT DT DT 1007 1007 1007 N 1 -3.63 0.60 127.20 123.57 A A A C2 N3 C4 DT DT DT 1007 1007 1007 N 1 3.59 0.50 111.90 115.49 A A A C2 N3 C4 DG DG DG 1009 1009 1009 N 1 -4.53 0.60 118.80 114.27 A A A C4 C5 C6 DG DG DG 1009 1009 1009 N 1 3.83 0.50 111.50 115.33 A A A C5 C6 N1 DG DG DG 1009 1009 1009 N 1 -4.73 0.60 119.90 115.17 A A A N1 C6 O6 DG DG DG 1009 1009 1009 N 1 -2.46 0.40 104.50 102.04 A A A O4' C4' C3' DG DG DG 1010 1010 1010 N 1 -6.49 0.70 108.00 101.51 A A A O4' C1' N9 DG DG DG 1010 1010 1010 N 1 -2.75 0.40 105.40 102.65 A A A N9 C4 C5 DG DG DG 1010 1010 1010 N 1 -5.14 0.60 119.90 114.76 A A A N1 C6 O6 DG DG DG 1010 1010 1010 N 1 4.13 0.60 128.60 132.73 A A A C5 C6 O6 DG DG DG 1010 1010 1010 N 1 -5.98 0.90 105.70 99.72 A A A O5' P OP2 DG DG DG 1011 1011 1011 N 1 5.44 0.30 108.30 113.74 A A A O4' C1' N9 DG DG DG 1011 1011 1011 N 1 -3.43 0.50 111.50 108.07 A A A C5 C6 N1 DG DG DG 1011 1011 1011 N 1 4.90 0.60 128.60 133.50 A A A C5 C6 O6 DG DG DG 1011 1011 1011 N 1 A A C5 C6 DG DG 1003 1003 -0.063 0.010 1.419 1.356 N 1 A A P O5' DG DG 1004 1004 -0.060 0.010 1.593 1.533 N 1 A A C4 C5 DG DG 1004 1004 -0.043 0.007 1.379 1.336 N 1 A A C4 C5 DG DG 1005 1005 -0.047 0.007 1.379 1.332 N 1 A A C6 N1 DG DG 1005 1005 -0.059 0.007 1.391 1.332 N 1 A A C4 C5 DG DG 1009 1009 -0.060 0.007 1.379 1.319 N 1 A A N7 C8 DG DG 1009 1009 -0.038 0.006 1.305 1.267 N 1 A A O3' C3' DG DG 1011 1011 -0.048 0.006 1.419 1.371 N 1 A A C6 O6 DG DG 1011 1011 0.057 0.009 1.237 1.294 N 21.260 1.39 0.70 0.00 1.39 0.00 -2.09 0.917 0.894 0.30275 0.25436 0.25664 0.25664 2.20 10.00 123 2520 2520 4.7 98.80 6.344 0.167 RANDOM 1 Overall THROUGHOUT 0.0 MOLECULAR REPLACEMENT 0.348 0.263 0.80 0.80 1.40 PDB ENTRY 1KF1 MAXIMUM LIKELIHOOD MASK 2.20 10.00 28 377 130 219 0 0.019 0.021 381 3.306 3.000 574 0.138 0.200 47 0.019 0.020 190 0.394 0.200 108 0.353 0.200 228 0.318 0.200 15 0.232 0.200 3 0.397 0.200 66 0.179 0.200 8 0.101 0.200 3 1.920 3.000 689 3.389 4.500 574 0.567 0.324 2.255 5 178 178 20 100.00 33 1.97 22.69 3CCO 3739 3697 0.0 0.056 1 23.3 10 98.9 0.134 1.97 2.04 10.8 359 10.8 100.0 refinement REFMAC 5.2.0019 data collection ADSC Quantum data reduction d*TREK data scaling d*TREK phasing PHASER Structural adaptation and conservation in quadruplex-drug recognition 1 N N 2 N N 3 N N 3 N N 3 N N 4 N N 4 N N 4 N N 5 N N metalc 2.816 A NA 4 B NA NA 1_555 A DG 1011 A O4' DG 11 1_555 metalc 2.937 A K 30 C K K 1_555 A DG 1004 A O6 DG 4 1_555 metalc 2.769 A K 30 C K K 1_555 A DG 1005 A O6 DG 5 1_555 metalc 2.658 A K 30 C K K 1_555 A DG 1011 A O6 DG 11 1_555 metalc 2.864 A K 31 D K K 1_555 A DG 1003 A O6 DG 3 1_555 metalc 2.963 A K 31 D K K 1_555 A DG 1009 A O6 DG 9 1_555 metalc 2.866 A K 32 E K K 1_555 A DG 1003 A O6 DG 3 1_555 metalc 2.899 A K 32 E K K 1_555 A DG 1009 A O6 DG 9 1_555 hydrog TYPE_11_PAIR A DG 1003 A N2 DG 3 1_555 A DA 1008 A N7 DA 8 1_555 hydrog TYPE_11_PAIR A DG 1003 A N3 DG 3 1_555 A DA 1008 A N6 DA 8 1_555 hydrog TYPE_6_PAIR A DG 1003 A N1 DG 3 1_555 A DG 1009 A O6 DG 9 1_555 hydrog TYPE_6_PAIR A DG 1003 A N2 DG 3 1_555 A DG 1009 A N7 DG 9 1_555 hydrog TYPE_6_PAIR A DG 1004 A N1 DG 4 1_555 A DG 1010 A O6 DG 10 1_555 hydrog TYPE_6_PAIR A DG 1004 A N2 DG 4 1_555 A DG 1010 A N7 DG 10 1_555 hydrog TYPE_6_PAIR A DG 1005 A N1 DG 5 1_555 A DG 1011 A O6 DG 11 1_555 hydrog TYPE_6_PAIR A DG 1005 A N2 DG 5 1_555 A DG 1011 A N7 DG 11 1_555 DNA QUADRUPLEX, DNA, PROPELLER, DIMERIC, HUMAN TELOMERE PARALLEL STRANDED, LIGAND, COMPLEX, naphthalene diimidine 3CCO PDB 1 1 3CCO TAGGGTTAGGGT 1001 1012 3CCO 1001 1012 3CCO A 1 1 12 BINDING SITE FOR RESIDUE NA A 4 A NA 4 Software 4 BINDING SITE FOR RESIDUE K A 30 A K 30 Software 5 BINDING SITE FOR RESIDUE K A 31 A K 31 Software 6 BINDING SITE FOR RESIDUE K A 32 A K 32 Software 3 BINDING SITE FOR RESIDUE NII A 1 A NII 1 Software 3 BINDING SITE FOR RESIDUE NII A 2 A NII 2 Software 4 BINDING SITE FOR RESIDUE NII A 3 A NII 3 Software 1 A DG 1011 A DG 11 4 1_555 A HOH 1013 I HOH 4 12_564 A HOH 1015 I HOH 4 12_564 A HOH 1020 I HOH 4 1_555 A K 31 D K 5 1_555 A DG 1004 A DG 4 5 12_564 A DG 1005 A DG 5 5 1_555 A DG 1010 A DG 10 5 1_555 A DG 1011 A DG 11 5 1_555 A K 30 C K 6 1_555 A K 32 E K 6 12_564 A DG 1003 A DG 3 6 12_564 A DG 1004 A DG 4 6 12_564 A DG 1009 A DG 9 6 12_564 A DG 1010 A DG 10 6 1_555 A K 31 D K 3 1_555 A DG 1003 A DG 3 3 12_564 A DG 1009 A DG 9 3 1_555 A DG 1005 A DG 5 3 1_555 A DT 1006 A DT 6 3 11_455 A DG 1011 A DG 11 3 1_555 A NII 3 H NII 4 12_565 A DT 1007 A DT 7 4 1_555 A DG 1009 A DG 9 4 4_565 A HOH 1016 I HOH 4 4_565 A NII 2 G NII 1 12_565 181 P 64 2 2