0.012212 0.007051 0.000000 0.000000 0.014101 0.000000 0.000000 0.000000 0.014158 0.000000 0.000000 0.000000 Joint Center for Structural Genomics (JCSG) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.000 90.000 120.000 81.886 81.886 70.633 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking O4 P -3 94.971 PHOSPHATE ION non-polymer C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking To be published 0353 Crystal structure of OsmC-like hydroperoxide resistance protein (YP_509982.1) from Jannaschia sp. CCS1 at 1.70 A resolution 10.2210/pdb3cje/pdb pdb_00003cje 100 1 1m long Rh coated bent cylindrical mirror for horizontal and vertical focusing CCD 2008-02-10 ADSC QUANTUM 315r Double crystal SINGLE WAVELENGTH M x-ray 1 0.978835 1.0 BL1-5 SSRL 0.978835 SYNCHROTRON SSRL BEAMLINE BL1-5 18414.389 OsmC-like protein 1 man polymer 94.971 PHOSPHATE ION 1 syn non-polymer 92.094 GLYCEROL 8 syn non-polymer 18.015 water 138 nat water no yes G(MSE)ALTPDQ(MSE)PDRAEVVFTCNGKAVGK(MSE)RNELDVA(MSE)VKPFEERFALATDEGAFHGGDASAPPPLA LFIAGLTGCV(MSE)TQIRAFAKRLKVTVTDLDVECRVVWDWAKAGPVYETGPKSFEIDIILHSPDPIEAQQALIEAAKK GCFLEQTLGQANTIRHRLKVGDTFIDA GMALTPDQMPDRAEVVFTCNGKAVGKMRNELDVAMVKPFEERFALATDEGAFHGGDASAPPPLALFIAGLTGCVMTQIRA FAKRLKVTVTDLDVECRVVWDWAKAGPVYETGPKSFEIDIILHSPDPIEAQQALIEAAKKGCFLEQTLGQANTIRHRLKV GDTFIDA A 371655 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Jannaschia CCS1 Escherichia sample YP_509982.1, Jann_2040 290400 Jannaschia sp. 562 Escherichia coli HK100 Plasmid SpeedET 1 3.71 66.87 VAPOR DIFFUSION, SITTING DROP 8.57 NANODROP, 1.545M Ammonium dihydrogen phosphate, 0.1M Tris-HCl pH 8.57, VAPOR DIFFUSION, SITTING DROP, temperature 293K 293 Joint Center for Structural Genomics JCSG PSI, Protein Structure Initiative software software struct_conn database_2 struct_ref_seq_dif struct_site repository Initial release Advisory Source and taxonomy Version format compliance Refinement description Data collection Derived calculations Refinement description Database references Derived calculations 1 0 2008-03-25 1 1 2011-07-13 1 2 2017-10-25 1 3 2019-07-24 1 4 2023-02-01 _software.classification _software.name _software.classification _software.contact_author _software.contact_author_email _software.language _software.location _software.name _software.type _software.version _struct_conn.pdbx_leaving_atom_flag _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y RCSB Y RCSB 2008-03-12 REL REL PO4 PHOSPHATE ION GOL GLYCEROL HOH water THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. PO4 1 2 PO4 PO4 167 A GOL 2 3 GOL GOL 168 A GOL 3 3 GOL GOL 169 A GOL 4 3 GOL GOL 170 A GOL 5 3 GOL GOL 171 A GOL 6 3 GOL GOL 172 A GOL 7 3 GOL GOL 173 A GOL 8 3 GOL GOL 174 A GOL 9 3 GOL GOL 175 A HOH 10 4 HOH HOH 176 A HOH 11 4 HOH HOH 177 A HOH 12 4 HOH HOH 178 A HOH 13 4 HOH HOH 179 A HOH 14 4 HOH HOH 180 A HOH 15 4 HOH HOH 181 A HOH 16 4 HOH HOH 182 A HOH 17 4 HOH HOH 183 A HOH 18 4 HOH HOH 184 A HOH 19 4 HOH HOH 185 A HOH 20 4 HOH HOH 186 A HOH 21 4 HOH HOH 187 A HOH 22 4 HOH HOH 188 A HOH 23 4 HOH HOH 189 A HOH 24 4 HOH HOH 190 A HOH 25 4 HOH HOH 191 A HOH 26 4 HOH HOH 192 A HOH 27 4 HOH HOH 193 A HOH 28 4 HOH HOH 194 A HOH 29 4 HOH HOH 195 A HOH 30 4 HOH HOH 196 A HOH 31 4 HOH HOH 197 A HOH 32 4 HOH HOH 198 A HOH 33 4 HOH HOH 199 A HOH 34 4 HOH HOH 200 A HOH 35 4 HOH HOH 201 A HOH 36 4 HOH HOH 202 A HOH 37 4 HOH HOH 203 A HOH 38 4 HOH HOH 204 A HOH 39 4 HOH HOH 205 A HOH 40 4 HOH HOH 206 A HOH 41 4 HOH HOH 207 A HOH 42 4 HOH HOH 208 A HOH 43 4 HOH HOH 209 A HOH 44 4 HOH HOH 210 A HOH 45 4 HOH HOH 211 A HOH 46 4 HOH HOH 212 A HOH 47 4 HOH HOH 213 A HOH 48 4 HOH HOH 214 A HOH 49 4 HOH HOH 215 A HOH 50 4 HOH HOH 216 A HOH 51 4 HOH HOH 217 A HOH 52 4 HOH HOH 218 A HOH 53 4 HOH HOH 219 A HOH 54 4 HOH HOH 220 A HOH 55 4 HOH HOH 221 A HOH 56 4 HOH HOH 222 A HOH 57 4 HOH HOH 223 A HOH 58 4 HOH HOH 224 A HOH 59 4 HOH HOH 225 A HOH 60 4 HOH HOH 226 A HOH 61 4 HOH HOH 227 A HOH 62 4 HOH HOH 228 A HOH 63 4 HOH HOH 229 A HOH 64 4 HOH HOH 230 A HOH 65 4 HOH HOH 231 A HOH 66 4 HOH HOH 232 A HOH 67 4 HOH HOH 233 A HOH 68 4 HOH HOH 234 A HOH 69 4 HOH HOH 235 A HOH 70 4 HOH HOH 236 A HOH 71 4 HOH HOH 237 A HOH 72 4 HOH HOH 238 A HOH 73 4 HOH HOH 239 A HOH 74 4 HOH HOH 240 A HOH 75 4 HOH HOH 241 A HOH 76 4 HOH HOH 242 A HOH 77 4 HOH HOH 243 A HOH 78 4 HOH HOH 244 A HOH 79 4 HOH HOH 245 A HOH 80 4 HOH HOH 246 A HOH 81 4 HOH HOH 247 A HOH 82 4 HOH HOH 248 A HOH 83 4 HOH HOH 249 A HOH 84 4 HOH HOH 250 A HOH 85 4 HOH HOH 251 A HOH 86 4 HOH HOH 252 A HOH 87 4 HOH HOH 253 A HOH 88 4 HOH HOH 254 A HOH 89 4 HOH HOH 255 A HOH 90 4 HOH HOH 256 A HOH 91 4 HOH HOH 257 A HOH 92 4 HOH HOH 258 A HOH 93 4 HOH HOH 259 A HOH 94 4 HOH HOH 260 A HOH 95 4 HOH HOH 261 A HOH 96 4 HOH HOH 262 A HOH 97 4 HOH HOH 263 A HOH 98 4 HOH HOH 264 A HOH 99 4 HOH HOH 265 A HOH 100 4 HOH HOH 266 A HOH 101 4 HOH HOH 267 A HOH 102 4 HOH HOH 268 A HOH 103 4 HOH HOH 269 A HOH 104 4 HOH HOH 270 A HOH 105 4 HOH HOH 271 A HOH 106 4 HOH HOH 272 A HOH 107 4 HOH HOH 273 A HOH 108 4 HOH HOH 274 A HOH 109 4 HOH HOH 275 A HOH 110 4 HOH HOH 276 A HOH 111 4 HOH HOH 277 A HOH 112 4 HOH HOH 278 A HOH 113 4 HOH HOH 279 A HOH 114 4 HOH HOH 280 A HOH 115 4 HOH HOH 281 A HOH 116 4 HOH HOH 282 A HOH 117 4 HOH HOH 283 A HOH 118 4 HOH HOH 284 A HOH 119 4 HOH HOH 285 A HOH 120 4 HOH HOH 286 A HOH 121 4 HOH HOH 287 A HOH 122 4 HOH HOH 288 A HOH 123 4 HOH HOH 289 A HOH 124 4 HOH HOH 290 A HOH 125 4 HOH HOH 291 A HOH 126 4 HOH HOH 292 A HOH 127 4 HOH HOH 293 A HOH 128 4 HOH HOH 294 A HOH 129 4 HOH HOH 295 A HOH 130 4 HOH HOH 296 A HOH 131 4 HOH HOH 297 A HOH 132 4 HOH HOH 298 A HOH 133 4 HOH HOH 299 A HOH 134 4 HOH HOH 300 A HOH 135 4 HOH HOH 301 A HOH 136 4 HOH HOH 302 A HOH 137 4 HOH HOH 303 A HOH 138 4 HOH HOH 304 A HOH 139 4 HOH HOH 305 A HOH 140 4 HOH HOH 306 A HOH 141 4 HOH HOH 307 A HOH 142 4 HOH HOH 308 A HOH 143 4 HOH HOH 309 A HOH 144 4 HOH HOH 310 A HOH 145 4 HOH HOH 311 A HOH 146 4 HOH HOH 312 A HOH 147 4 HOH HOH 313 A n 1 0 A n 2 1 A n 3 2 A n 4 3 A n 5 4 A n 6 5 A n 7 6 A n 8 7 A n 9 8 A n 10 9 A n 11 10 A ARG 11 n 12 ARG 11 A ALA 12 n 13 ALA 12 A GLU 13 n 14 GLU 13 A VAL 14 n 15 VAL 14 A VAL 15 n 16 VAL 15 A PHE 16 n 17 PHE 16 A THR 17 n 18 THR 17 A CYS 18 n 19 CYS 18 A ASN 19 n 20 ASN 19 A GLY 20 n 21 GLY 20 A LYS 21 n 22 LYS 21 A ALA 22 n 23 ALA 22 A VAL 23 n 24 VAL 23 A GLY 24 n 25 GLY 24 A LYS 25 n 26 LYS 25 A MSE 26 n 27 MSE 26 A ARG 27 n 28 ARG 27 A ASN 28 n 29 ASN 28 A GLU 29 n 30 GLU 29 A LEU 30 n 31 LEU 30 A ASP 31 n 32 ASP 31 A VAL 32 n 33 VAL 32 A ALA 33 n 34 ALA 33 A MSE 34 n 35 MSE 34 A VAL 35 n 36 VAL 35 A LYS 36 n 37 LYS 36 A PRO 37 n 38 PRO 37 A PHE 38 n 39 PHE 38 A GLU 39 n 40 GLU 39 A GLU 40 n 41 GLU 40 A ARG 41 n 42 ARG 41 A PHE 42 n 43 PHE 42 A ALA 43 n 44 ALA 43 A LEU 44 n 45 LEU 44 A ALA 45 n 46 ALA 45 A THR 46 n 47 THR 46 A ASP 47 n 48 ASP 47 A GLU 48 n 49 GLU 48 A GLY 49 n 50 GLY 49 A ALA 50 n 51 ALA 50 A n 52 51 A n 53 52 A n 54 53 A n 55 54 A n 56 55 A n 57 56 A SER 57 n 58 SER 57 A ALA 58 n 59 ALA 58 A PRO 59 n 60 PRO 59 A PRO 60 n 61 PRO 60 A PRO 61 n 62 PRO 61 A LEU 62 n 63 LEU 62 A ALA 63 n 64 ALA 63 A LEU 64 n 65 LEU 64 A PHE 65 n 66 PHE 65 A ILE 66 n 67 ILE 66 A ALA 67 n 68 ALA 67 A GLY 68 n 69 GLY 68 A LEU 69 n 70 LEU 69 A THR 70 n 71 THR 70 A GLY 71 n 72 GLY 71 A CYS 72 n 73 CYS 72 A VAL 73 n 74 VAL 73 A MSE 74 n 75 MSE 74 A THR 75 n 76 THR 75 A GLN 76 n 77 GLN 76 A ILE 77 n 78 ILE 77 A ARG 78 n 79 ARG 78 A ALA 79 n 80 ALA 79 A PHE 80 n 81 PHE 80 A ALA 81 n 82 ALA 81 A LYS 82 n 83 LYS 82 A ARG 83 n 84 ARG 83 A LEU 84 n 85 LEU 84 A LYS 85 n 86 LYS 85 A VAL 86 n 87 VAL 86 A THR 87 n 88 THR 87 A VAL 88 n 89 VAL 88 A THR 89 n 90 THR 89 A ASP 90 n 91 ASP 90 A LEU 91 n 92 LEU 91 A ASP 92 n 93 ASP 92 A VAL 93 n 94 VAL 93 A GLU 94 n 95 GLU 94 A CYS 95 n 96 CYS 95 A ARG 96 n 97 ARG 96 A VAL 97 n 98 VAL 97 A VAL 98 n 99 VAL 98 A TRP 99 n 100 TRP 99 A ASP 100 n 101 ASP 100 A TRP 101 n 102 TRP 101 A ALA 102 n 103 ALA 102 A LYS 103 n 104 LYS 103 A ALA 104 n 105 ALA 104 A GLY 105 n 106 GLY 105 A PRO 106 n 107 PRO 106 A VAL 107 n 108 VAL 107 A TYR 108 n 109 TYR 108 A GLU 109 n 110 GLU 109 A THR 110 n 111 THR 110 A GLY 111 n 112 GLY 111 A PRO 112 n 113 PRO 112 A LYS 113 n 114 LYS 113 A SER 114 n 115 SER 114 A PHE 115 n 116 PHE 115 A GLU 116 n 117 GLU 116 A ILE 117 n 118 ILE 117 A ASP 118 n 119 ASP 118 A ILE 119 n 120 ILE 119 A ILE 120 n 121 ILE 120 A LEU 121 n 122 LEU 121 A HIS 122 n 123 HIS 122 A SER 123 n 124 SER 123 A PRO 124 n 125 PRO 124 A ASP 125 n 126 ASP 125 A PRO 126 n 127 PRO 126 A ILE 127 n 128 ILE 127 A GLU 128 n 129 GLU 128 A ALA 129 n 130 ALA 129 A GLN 130 n 131 GLN 130 A GLN 131 n 132 GLN 131 A ALA 132 n 133 ALA 132 A LEU 133 n 134 LEU 133 A ILE 134 n 135 ILE 134 A GLU 135 n 136 GLU 135 A ALA 136 n 137 ALA 136 A ALA 137 n 138 ALA 137 A LYS 138 n 139 LYS 138 A LYS 139 n 140 LYS 139 A GLY 140 n 141 GLY 140 A CYS 141 n 142 CYS 141 A PHE 142 n 143 PHE 142 A LEU 143 n 144 LEU 143 A GLU 144 n 145 GLU 144 A GLN 145 n 146 GLN 145 A THR 146 n 147 THR 146 A LEU 147 n 148 LEU 147 A GLY 148 n 149 GLY 148 A GLN 149 n 150 GLN 149 A ALA 150 n 151 ALA 150 A ASN 151 n 152 ASN 151 A THR 152 n 153 THR 152 A ILE 153 n 154 ILE 153 A ARG 154 n 155 ARG 154 A HIS 155 n 156 HIS 155 A ARG 156 n 157 ARG 156 A LEU 157 n 158 LEU 157 A LYS 158 n 159 LYS 158 A VAL 159 n 160 VAL 159 A GLY 160 n 161 GLY 160 A ASP 161 n 162 ASP 161 A THR 162 n 163 THR 162 A PHE 163 n 164 PHE 163 A ILE 164 n 165 ILE 164 A ASP 165 n 166 ASP 165 A ALA 166 n 167 ALA 166 A 0.1806 -0.0356 -0.0352 0.7600 0.2396 0.4667 0.0198 0.0029 0.0180 -0.0235 -0.0083 -0.0524 -0.0065 -0.0092 -0.0115 -0.0378 -0.0071 -0.0013 -0.0225 -0.0034 -0.0308 refined -0.0888 67.2756 6.8212 X-RAY DIFFRACTION A 11 A 12 A 166 A 167 X-RAY DIFFRACTION 1 software_defined_assembly PISA 2 dimeric 6410 -46.3 13500 A MSE 26 SELENOMETHIONINE A MSE 27 MET A MSE 34 SELENOMETHIONINE A MSE 35 MET A MSE 74 SELENOMETHIONINE A MSE 75 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 5_675 x-y+1,-y+2,-z+1/3 crystal symmetry operation 0.0000000000 141.8307124286 23.5443333333 A O LEU 44 A O LEU 45 A N LEU 30 A N LEU 31 A O VAL 35 A O VAL 36 A N VAL 15 A N VAL 16 A N GLY 20 A N GLY 21 A O VAL 93 A O VAL 94 A N ALA 104 A N ALA 105 A O VAL 107 A O VAL 108 A N VAL 159 A N VAL 160 A O THR 162 A O THR 163 1 A HOH 176 K HOH 1 A CG ARG 11 A CG ARG 12 1 Y 1 A CD ARG 11 A CD ARG 12 1 Y 1 A NE ARG 11 A NE ARG 12 1 Y 1 A CZ ARG 11 A CZ ARG 12 1 Y 1 A NH1 ARG 11 A NH1 ARG 12 1 Y 1 A NH2 ARG 11 A NH2 ARG 12 1 Y 1 A CE LYS 21 A CE LYS 22 1 Y 1 A NZ LYS 21 A NZ LYS 22 1 Y 1 A GLY 0 A GLY 1 1 Y 1 A MSE 1 A MSE 2 1 Y 1 A ALA 2 A ALA 3 1 Y 1 A LEU 3 A LEU 4 1 Y 1 A THR 4 A THR 5 1 Y 1 A PRO 5 A PRO 6 1 Y 1 A ASP 6 A ASP 7 1 Y 1 A GLN 7 A GLN 8 1 Y 1 A MSE 8 A MSE 9 1 Y 1 A PRO 9 A PRO 10 1 Y 1 A ASP 10 A ASP 11 1 Y 1 A PHE 51 A PHE 52 1 Y 1 A HIS 52 A HIS 53 1 Y 1 A GLY 53 A GLY 54 1 Y 1 A GLY 54 A GLY 55 1 Y 1 A ASP 55 A ASP 56 1 Y 1 A ALA 56 A ALA 57 1 Y 1 A GLU 40 B -170.41 134.64 17.065 0.500 0.250 0.000 0.500 0.000 -0.740 0.973 0.966 1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. RESIDUES A51-A56 WERE DISORDERED AND NOT VISIBLE IN THE ELECTRON DENSITY MAPS. THEY WERE NOT BUILT. 5. PHOSPHATE (PO4) ION FROM CRYSTALLIZATION AND GLYCEROL (GOL) FROM CRYO SOLUTION WERE MODELED. 6. UNEXPLAINED ELECTRON DENSITY NEAR RESIDUE 103 AND 118 WAS NOT MODELED. 0.164 0.144 0.145 1.700 26.803 1538 30438 5.100 99.960 2.334 0.038 RANDOM LIKELY RESIDUAL 1 THROUGHOUT 0.00 SAD 0.062 0.063 0.800 0.800 1.200 MAXIMUM LIKELIHOOD WITH PHASES MASK 1.700 26.803 138 1336 53 0 1145 0.016 0.022 1311 0.002 0.020 902 1.590 1.997 1777 0.932 3.000 2217 6.039 5.000 169 38.518 24.906 53 12.489 15.000 221 9.965 15.000 7 0.085 0.200 197 0.007 0.020 1458 0.002 0.020 247 0.264 0.200 212 0.206 0.200 914 0.173 0.200 624 0.086 0.200 718 0.232 0.200 101 0.193 0.200 26 0.235 0.200 104 0.186 0.200 23 2.658 3.000 875 0.518 3.000 323 3.236 5.000 1321 5.832 8.000 533 8.068 11.000 456 0.269 0.221 1.745 111 2116 2227 20 100.000 19.728 1.70 26.803 3CJE 30482 0.097 0.097 1 5.300 10.400 100.000 0.812 1.70 1.74 0.9 16225 2149 0.812 1 7.60 100.00 0.668 1.74 1.79 1.1 23201 2156 0.668 1 10.80 100.00 0.526 1.79 1.84 1.4 22793 2108 0.526 1 10.80 100.00 0.401 1.84 1.90 1.8 22578 2095 0.401 1 10.80 100.00 0.289 1.90 1.96 2.5 21328 1980 0.289 1 10.80 100.00 0.215 1.96 2.03 3.5 20836 1936 0.215 1 10.80 100.00 0.178 2.03 2.11 4.0 20136 1869 0.178 1 10.80 100.00 0.149 2.11 2.19 4.8 19177 1787 0.149 1 10.70 100.00 0.137 2.19 2.29 4.8 18565 1739 0.137 1 10.70 100.00 0.118 2.29 2.40 5.9 17803 1667 0.118 1 10.70 100.00 0.108 2.40 2.53 6.3 16608 1566 0.108 1 10.60 100.00 0.094 2.53 2.69 7.2 15758 1494 0.094 1 10.50 100.00 0.085 2.69 2.87 7.8 14826 1406 0.085 1 10.50 100.00 0.076 2.87 3.10 8.7 13622 1319 0.076 1 10.30 100.00 0.066 3.10 3.40 9.8 12386 1232 0.066 1 10.10 100.00 0.061 3.40 3.80 10.2 10114 1096 0.061 1 9.20 99.90 0.066 3.80 4.39 9.4 10296 981 0.066 1 10.50 100.00 0.059 4.39 5.38 10.3 9037 843 0.059 1 10.70 100.00 0.066 5.38 7.60 9.5 6914 671 0.066 1 10.30 100.00 0.055 7.60 26.803 10.8 3672 388 0.055 1 9.50 98.00 refinement Murshudov, G.N. ccp4@dl.ac.uk Fortran_77 http://www.ccp4.ac.uk/main.html REFMAC program 5.2.0019 refinement P.D. Adams PDAdams@lbl.gov C++ http://www.phenix-online.org/ PHENIX package phasing George Sheldrick gsheldr@shelx.uni-ac.gwdg.de Fortran_77 http://shelx.uni-ac.gwdg.de/SHELX/ SHELX package model building D.C. & J.S. Richardson lab molprobity@kinemage.biochem.duke.edu http://kinemage.biochem.duke.edu/molprobity/ MolProbity package 3beta29 data scaling Phil Evans pre@mrc-lmb.cam.ac.uk Fortran_77 http://www.ccp4.ac.uk/dist/html/INDEX.html SCALA other data extraction PDB sw-help@rcsb.rutgers.edu July 2, 2007 C++ http://pdb.rutgers.edu/software/ PDB_EXTRACT package 3.000 data collection ADSC Quantum data reduction MOSFLM phasing SHELXD phasing autoSHARP Crystal structure of an osmc-like hydroperoxide resistance protein (jann_2040) from jannaschia sp. ccs1 at 1.70 A resolution 1 N N 2 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 4 N N AUTHORS STATE THAT THE CRYSTAL PACKING ANALYSIS SUPPORTS THE ASSIGNMENT OF A DIMER AS THE SIGNIFICANT OLIGOMERIZATION STATE. A PRO 60 A PRO 61 HELX_P A ALA 81 A ALA 82 1 1 22 A PRO 126 A PRO 127 HELX_P A CYS 141 A CYS 142 1 2 16 A CYS 141 A CYS 142 HELX_P A GLY 148 A GLY 149 1 3 8 covale 1.332 both A LYS 25 A C LYS 26 1_555 A MSE 26 A N MSE 27 1_555 covale 1.331 both A MSE 26 A C MSE 27 1_555 A ARG 27 A N ARG 28 1_555 covale 1.331 both A A ALA 33 A C ALA 34 1_555 A MSE 34 A N MSE 35 1_555 covale 1.327 both B A ALA 33 A C ALA 34 1_555 A MSE 34 A N MSE 35 1_555 covale 1.330 both A A MSE 34 A C MSE 35 1_555 A VAL 35 A N VAL 36 1_555 covale 1.332 both B A MSE 34 A C MSE 35 1_555 A VAL 35 A N VAL 36 1_555 covale 1.336 both A VAL 73 A C VAL 74 1_555 A MSE 74 A N MSE 75 1_555 covale 1.332 both A MSE 74 A C MSE 75 1_555 A THR 75 A N THR 76 1_555 OXIDOREDUCTASE Structural genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, oxidoreductase A LYS 36 A LYS 37 1 A PRO 37 A PRO 38 5.43 Q28QQ5_JANSC UNP 1 1 Q28QQ5 MALTPDQMPDRAEVVFTCNGKAVGKMRNELDVAMVKPFEERFALATDEGAFHGGDASAPPPLALFIAGLTGCVMTQIRAF AKRLKVTVTDLDVECRVVWDWAKAGPVYETGPKSFEIDIILHSPDPIEAQQALIEAAKKGCFLEQTLGQANTIRHRLKVG DTFIDA 1 166 3CJE 1 166 Q28QQ5 A 1 2 167 1 expression tag GLY 0 3CJE A Q28QQ5 UNP 1 5 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A GLU 40 A GLU 41 A THR 46 A THR 47 A ARG 27 A ARG 28 A LYS 36 A LYS 37 A ALA 12 A ALA 13 A VAL 23 A VAL 24 A ASP 92 A ASP 93 A ALA 104 A ALA 105 A VAL 107 A VAL 108 A ILE 120 A ILE 121 A ARG 156 A ARG 157 A VAL 159 A VAL 160 A THR 162 A THR 163 A ASP 165 A ASP 166 BINDING SITE FOR RESIDUE PO4 A 167 A PO4 167 Software 6 BINDING SITE FOR RESIDUE GOL A 168 A GOL 168 Software 6 BINDING SITE FOR RESIDUE GOL A 169 A GOL 169 Software 6 BINDING SITE FOR RESIDUE GOL A 170 A GOL 170 Software 5 BINDING SITE FOR RESIDUE GOL A 171 A GOL 171 Software 6 BINDING SITE FOR RESIDUE GOL A 172 A GOL 172 Software 9 BINDING SITE FOR RESIDUE GOL A 173 A GOL 173 Software 9 BINDING SITE FOR RESIDUE GOL A 174 A GOL 174 Software 4 BINDING SITE FOR RESIDUE GOL A 175 A GOL 175 Software 7 A GLY 24 A GLY 25 6 1_555 A LYS 25 A LYS 26 6 1_555 A ARG 27 A ARG 28 6 1_555 A ASP 47 A ASP 48 6 1_555 A HOH 264 K HOH 6 6_655 A HOH 283 K HOH 6 1_555 A LYS 82 A LYS 83 6 1_555 A ARG 83 A ARG 84 6 1_555 A HOH 260 K HOH 6 1_555 A HOH 303 K HOH 6 3_565 A HOH 304 K HOH 6 1_555 A HOH 308 K HOH 6 1_555 A ALA 22 A ALA 23 6 1_555 A ARG 78 A ARG 79 6 1_555 A ASP 90 A ASP 91 6 1_555 A LEU 91 A LEU 92 6 1_555 A HOH 197 K HOH 6 1_555 A HOH 242 K HOH 6 1_555 A LYS 25 A LYS 26 5 1_555 A ARG 78 A ARG 79 5 1_555 A GLY 160 A GLY 161 5 6_655 A ASP 161 A ASP 162 5 6_655 A HOH 242 K HOH 5 1_555 A GLU 13 A GLU 14 6 4_455 A PRO 37 A PRO 38 6 4_455 A TRP 101 A TRP 102 6 4_455 A HOH 228 K HOH 6 1_555 A HOH 233 K HOH 6 1_555 A HOH 271 K HOH 6 4_455 A ALA 79 A ALA 80 9 2_664 A ARG 83 A ARG 84 9 2_664 A SER 123 A SER 124 9 1_555 A PRO 124 A PRO 125 9 1_555 A ASP 125 A ASP 126 9 1_555 A GLN 130 A GLN 131 9 1_555 A HOH 183 K HOH 9 1_555 A HOH 189 K HOH 9 1_555 A HOH 308 K HOH 9 2_664 A ALA 12 A ALA 13 9 1_555 A LYS 85 A LYS 86 9 4_565 A THR 87 A THR 88 9 4_565 A TRP 101 A TRP 102 9 1_555 A ALA 102 A ALA 103 9 1_555 A LYS 103 A LYS 104 9 1_555 A ASP 125 A ASP 126 9 4_565 A HOH 253 K HOH 9 1_555 A HOH 293 K HOH 9 4_565 A LYS 82 A LYS 83 4 1_555 A THR 87 A THR 88 4 1_555 A ASP 161 A ASP 162 4 6_655 A HOH 293 K HOH 4 1_555 A ARG 83 A ARG 84 7 2_664 A LYS 103 A LYS 104 7 4_455 A GLY 105 A GLY 106 7 4_455 A HIS 122 A HIS 123 7 1_555 A PRO 124 A PRO 125 7 1_555 A HOH 290 K HOH 7 1_555 A HOH 301 K HOH 7 1_555 154 P 32 2 1