0.010219
0.000000
0.001962
0.000000
0.020937
0.000000
0.000000
0.000000
0.023610
0.000000
0.000000
0.000000
Kruse, S.W.
Reynolds, R.
Vonrhein, C.
Xu, H.E.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.000
100.870
90.000
97.854
47.762
43.128
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
N
N
159
S
C
N
160
N
C
N
161
N
O
N
162
S
C
N
163
N
C
N
164
N
C
N
165
N
C
N
166
N
O
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
N
N
181
S
C
N
182
N
C
N
183
N
O
N
184
N
C
N
185
N
C
N
186
N
C
N
187
N
C
N
188
N
O
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
N
N
203
S
C
N
204
N
C
N
205
N
O
N
206
N
C
N
207
N
C
N
208
N
C
N
209
N
C
N
210
N
N
N
211
N
O
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
N
N
228
S
C
N
229
N
C
N
230
N
O
N
231
N
C
N
232
N
C
N
233
N
S
N
234
N
C
N
235
N
O
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
N
N
248
S
C
N
249
N
C
N
250
N
O
N
251
N
C
Y
252
N
C
Y
253
N
C
Y
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
N
258
N
O
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
N
N
271
S
C
N
272
N
C
N
273
N
O
N
274
N
C
N
275
N
C
N
276
N
C
N
277
N
O
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
N
C
N
292
N
O
N
293
N
O
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
N
N
302
S
C
N
303
N
C
N
304
N
O
N
305
R
C
N
306
N
O
N
307
N
C
N
308
N
O
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
N
C
Y
323
N
C
Y
324
N
C
Y
325
N
C
Y
326
N
N
Y
327
N
C
Y
328
N
C
Y
329
N
C
Y
330
N
C
Y
331
N
C
N
332
N
O
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
N
N
346
S
C
N
347
N
C
N
348
N
O
N
349
N
C
Y
350
N
C
Y
351
N
C
Y
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
N
356
N
O
N
357
N
O
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
N
N
370
S
C
N
371
N
C
N
372
N
O
N
373
N
C
N
374
N
C
N
375
N
C
N
376
N
O
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
doub
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
doub
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
doub
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
Y
246
N
doub
Y
247
N
sing
Y
248
N
sing
N
249
N
sing
Y
250
N
doub
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
doub
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
doub
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
doub
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
Y
315
N
doub
Y
316
N
sing
Y
317
N
sing
N
318
N
sing
Y
319
N
doub
Y
320
N
sing
Y
321
N
sing
N
322
N
sing
Y
323
N
sing
Y
324
N
doub
N
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
doub
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
Y
343
N
doub
Y
344
N
sing
Y
345
N
sing
N
346
N
sing
Y
347
N
doub
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
doub
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
US
Plos Biol.
1544-9173
6
e227
e227
10.1371/journal.pbio.0060227
18798693
Identification of COUP-TFII Orphan Nuclear Receptor as a Retinoic Acid-Activated Receptor.
2008
10.2210/pdb3cjw/pdb
pdb_00003cjw
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
93
1
CCD
MARMOSAIC 225 mm CCD
MAD
M
x-ray
1
0.7
1.0
1.0
1.0
1.4
1.0
1.8
1.0
5ID-B
APS
0.7, 1.0, 1.4, 1.8
SYNCHROTRON
APS BEAMLINE 5ID-B
27311.561
COUP transcription factor 2
ligand binding domain, residues 173-412
1
man
polymer
COUP-TF2, COUP-TF II, Nuclear receptor subfamily 2 group F member 2, Apolipoprotein AI regulatory protein 1, ARP-1
no
no
GSNSHSYLSGYISLLLRAEPYPTSRFGSQCMQPNNIMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLTWS
ELFVLNAAQCSMPLHVAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSD
VAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDMLLSGSSFNWPY
MAIQ
GSNSHSYLSGYISLLLRAEPYPTSRFGSQCMQPNNIMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLTWS
ELFVLNAAQCSMPLHVAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSD
VAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDMLLSGSSFNWPY
MAIQ
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
sample
NR2F2, ARP1, TFCOUP2
9606
Homo sapiens
562
Escherichia coli
BL21(DE3)
plasmid
pET24
1
1.81
32.12
hanging drop
5.6
1.5M Imidazole, pH 5.6, hanging drop, temperature 293K
293
entity_src_gen
pdbx_struct_assembly
pdbx_struct_assembly_gen
pdbx_struct_assembly_prop
struct_ref_seq_dif
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Version format compliance
Database references
Derived calculations
Source and taxonomy
Data collection
Database references
1
0
2008-10-07
1
1
2011-07-13
1
2
2020-05-06
1
3
2024-02-21
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id
_pdbx_struct_assembly.details
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly_gen.oper_expression
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.value
_struct_ref_seq_dif.details
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
RCSB
Y
RCSB
2008-03-14
REL
REL
GLY
171
n
1
GLY
171
A
SER
172
n
2
SER
172
A
ASN
173
n
3
ASN
173
A
SER
174
n
4
SER
174
A
HIS
175
n
5
HIS
175
A
SER
176
n
6
SER
176
A
TYR
177
n
7
TYR
177
A
LEU
178
n
8
LEU
178
A
SER
179
n
9
SER
179
A
GLY
180
n
10
GLY
180
A
TYR
181
n
11
TYR
181
A
ILE
182
n
12
ILE
182
A
SER
183
n
13
SER
183
A
LEU
184
n
14
LEU
184
A
LEU
185
n
15
LEU
185
A
LEU
186
n
16
LEU
186
A
ARG
187
n
17
ARG
187
A
ALA
188
n
18
ALA
188
A
GLU
189
n
19
GLU
189
A
PRO
190
n
20
PRO
190
A
TYR
191
n
21
TYR
191
A
PRO
192
n
22
PRO
192
A
THR
193
n
23
THR
193
A
n
24
194
A
n
25
195
A
n
26
196
A
n
27
197
A
n
28
198
A
n
29
199
A
n
30
200
A
n
31
201
A
n
32
202
A
n
33
203
A
n
34
204
A
n
35
205
A
n
36
206
A
MET
207
n
37
MET
207
A
GLY
208
n
38
GLY
208
A
ILE
209
n
39
ILE
209
A
GLU
210
n
40
GLU
210
A
ASN
211
n
41
ASN
211
A
ILE
212
n
42
ILE
212
A
CYS
213
n
43
CYS
213
A
GLU
214
n
44
GLU
214
A
LEU
215
n
45
LEU
215
A
ALA
216
n
46
ALA
216
A
ALA
217
n
47
ALA
217
A
ARG
218
n
48
ARG
218
A
MET
219
n
49
MET
219
A
LEU
220
n
50
LEU
220
A
PHE
221
n
51
PHE
221
A
SER
222
n
52
SER
222
A
ALA
223
n
53
ALA
223
A
VAL
224
n
54
VAL
224
A
GLU
225
n
55
GLU
225
A
TRP
226
n
56
TRP
226
A
ALA
227
n
57
ALA
227
A
ARG
228
n
58
ARG
228
A
ASN
229
n
59
ASN
229
A
ILE
230
n
60
ILE
230
A
PRO
231
n
61
PRO
231
A
PHE
232
n
62
PHE
232
A
PHE
233
n
63
PHE
233
A
PRO
234
n
64
PRO
234
A
ASP
235
n
65
ASP
235
A
LEU
236
n
66
LEU
236
A
GLN
237
n
67
GLN
237
A
ILE
238
n
68
ILE
238
A
THR
239
n
69
THR
239
A
ASP
240
n
70
ASP
240
A
GLN
241
n
71
GLN
241
A
VAL
242
n
72
VAL
242
A
ALA
243
n
73
ALA
243
A
LEU
244
n
74
LEU
244
A
LEU
245
n
75
LEU
245
A
ARG
246
n
76
ARG
246
A
LEU
247
n
77
LEU
247
A
THR
248
n
78
THR
248
A
TRP
249
n
79
TRP
249
A
SER
250
n
80
SER
250
A
GLU
251
n
81
GLU
251
A
LEU
252
n
82
LEU
252
A
PHE
253
n
83
PHE
253
A
VAL
254
n
84
VAL
254
A
LEU
255
n
85
LEU
255
A
ASN
256
n
86
ASN
256
A
ALA
257
n
87
ALA
257
A
ALA
258
n
88
ALA
258
A
GLN
259
n
89
GLN
259
A
CYS
260
n
90
CYS
260
A
SER
261
n
91
SER
261
A
MET
262
n
92
MET
262
A
PRO
263
n
93
PRO
263
A
LEU
264
n
94
LEU
264
A
HIS
265
n
95
HIS
265
A
VAL
266
n
96
VAL
266
A
ALA
267
n
97
ALA
267
A
PRO
268
n
98
PRO
268
A
n
99
269
A
n
100
270
A
n
101
271
A
n
102
272
A
n
103
273
A
n
104
274
A
n
105
275
A
n
106
276
A
n
107
277
A
n
108
278
A
n
109
279
A
n
110
280
A
n
111
281
A
n
112
282
A
n
113
283
A
n
114
284
A
n
115
285
A
VAL
286
n
116
VAL
286
A
ALA
287
n
117
ALA
287
A
PHE
288
n
118
PHE
288
A
MET
289
n
119
MET
289
A
ASP
290
n
120
ASP
290
A
HIS
291
n
121
HIS
291
A
ILE
292
n
122
ILE
292
A
ARG
293
n
123
ARG
293
A
ILE
294
n
124
ILE
294
A
PHE
295
n
125
PHE
295
A
GLN
296
n
126
GLN
296
A
GLU
297
n
127
GLU
297
A
GLN
298
n
128
GLN
298
A
VAL
299
n
129
VAL
299
A
GLU
300
n
130
GLU
300
A
LYS
301
n
131
LYS
301
A
LEU
302
n
132
LEU
302
A
LYS
303
n
133
LYS
303
A
ALA
304
n
134
ALA
304
A
LEU
305
n
135
LEU
305
A
HIS
306
n
136
HIS
306
A
VAL
307
n
137
VAL
307
A
ASP
308
n
138
ASP
308
A
SER
309
n
139
SER
309
A
ALA
310
n
140
ALA
310
A
GLU
311
n
141
GLU
311
A
TYR
312
n
142
TYR
312
A
SER
313
n
143
SER
313
A
CYS
314
n
144
CYS
314
A
LEU
315
n
145
LEU
315
A
LYS
316
n
146
LYS
316
A
ALA
317
n
147
ALA
317
A
ILE
318
n
148
ILE
318
A
VAL
319
n
149
VAL
319
A
LEU
320
n
150
LEU
320
A
PHE
321
n
151
PHE
321
A
THR
322
n
152
THR
322
A
SER
323
n
153
SER
323
A
ASP
324
n
154
ASP
324
A
ALA
325
n
155
ALA
325
A
CYS
326
n
156
CYS
326
A
GLY
327
n
157
GLY
327
A
LEU
328
n
158
LEU
328
A
SER
329
n
159
SER
329
A
ASP
330
n
160
ASP
330
A
VAL
331
n
161
VAL
331
A
ALA
332
n
162
ALA
332
A
HIS
333
n
163
HIS
333
A
VAL
334
n
164
VAL
334
A
GLU
335
n
165
GLU
335
A
SER
336
n
166
SER
336
A
LEU
337
n
167
LEU
337
A
GLN
338
n
168
GLN
338
A
GLU
339
n
169
GLU
339
A
LYS
340
n
170
LYS
340
A
SER
341
n
171
SER
341
A
GLN
342
n
172
GLN
342
A
CYS
343
n
173
CYS
343
A
ALA
344
n
174
ALA
344
A
LEU
345
n
175
LEU
345
A
GLU
346
n
176
GLU
346
A
GLU
347
n
177
GLU
347
A
TYR
348
n
178
TYR
348
A
VAL
349
n
179
VAL
349
A
ARG
350
n
180
ARG
350
A
SER
351
n
181
SER
351
A
GLN
352
n
182
GLN
352
A
TYR
353
n
183
TYR
353
A
PRO
354
n
184
PRO
354
A
ASN
355
n
185
ASN
355
A
GLN
356
n
186
GLN
356
A
PRO
357
n
187
PRO
357
A
THR
358
n
188
THR
358
A
ARG
359
n
189
ARG
359
A
PHE
360
n
190
PHE
360
A
GLY
361
n
191
GLY
361
A
LYS
362
n
192
LYS
362
A
LEU
363
n
193
LEU
363
A
LEU
364
n
194
LEU
364
A
LEU
365
n
195
LEU
365
A
ARG
366
n
196
ARG
366
A
LEU
367
n
197
LEU
367
A
PRO
368
n
198
PRO
368
A
SER
369
n
199
SER
369
A
LEU
370
n
200
LEU
370
A
ARG
371
n
201
ARG
371
A
THR
372
n
202
THR
372
A
VAL
373
n
203
VAL
373
A
SER
374
n
204
SER
374
A
SER
375
n
205
SER
375
A
SER
376
n
206
SER
376
A
VAL
377
n
207
VAL
377
A
ILE
378
n
208
ILE
378
A
GLU
379
n
209
GLU
379
A
GLN
380
n
210
GLN
380
A
LEU
381
n
211
LEU
381
A
PHE
382
n
212
PHE
382
A
PHE
383
n
213
PHE
383
A
VAL
384
n
214
VAL
384
A
ARG
385
n
215
ARG
385
A
LEU
386
n
216
LEU
386
A
VAL
387
n
217
VAL
387
A
GLY
388
n
218
GLY
388
A
LYS
389
n
219
LYS
389
A
THR
390
n
220
THR
390
A
PRO
391
n
221
PRO
391
A
ILE
392
n
222
ILE
392
A
GLU
393
n
223
GLU
393
A
THR
394
n
224
THR
394
A
LEU
395
n
225
LEU
395
A
ILE
396
n
226
ILE
396
A
ARG
397
n
227
ARG
397
A
ASP
398
n
228
ASP
398
A
MET
399
n
229
MET
399
A
LEU
400
n
230
LEU
400
A
LEU
401
n
231
LEU
401
A
SER
402
n
232
SER
402
A
GLY
403
n
233
GLY
403
A
SER
404
n
234
SER
404
A
SER
405
n
235
SER
405
A
PHE
406
n
236
PHE
406
A
ASN
407
n
237
ASN
407
A
n
238
408
A
n
239
409
A
n
240
410
A
n
241
411
A
n
242
412
A
n
243
413
A
n
244
414
A
author_defined_assembly
1
monomeric
software_defined_assembly
PISA
2
dimeric
1850
-8
19650
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
2_656
-x+1,y,-z+1
crystal symmetry operation
89.7208672155
0.0000000000
42.3541796652
1
A
SER
194
A
SER
24
1
Y
1
A
ARG
195
A
ARG
25
1
Y
1
A
PHE
196
A
PHE
26
1
Y
1
A
GLY
197
A
GLY
27
1
Y
1
A
SER
198
A
SER
28
1
Y
1
A
GLN
199
A
GLN
29
1
Y
1
A
CYS
200
A
CYS
30
1
Y
1
A
MET
201
A
MET
31
1
Y
1
A
GLN
202
A
GLN
32
1
Y
1
A
PRO
203
A
PRO
33
1
Y
1
A
ASN
204
A
ASN
34
1
Y
1
A
ASN
205
A
ASN
35
1
Y
1
A
ILE
206
A
ILE
36
1
Y
1
A
LEU
269
A
LEU
99
1
Y
1
A
LEU
270
A
LEU
100
1
Y
1
A
ALA
271
A
ALA
101
1
Y
1
A
ALA
272
A
ALA
102
1
Y
1
A
ALA
273
A
ALA
103
1
Y
1
A
GLY
274
A
GLY
104
1
Y
1
A
LEU
275
A
LEU
105
1
Y
1
A
HIS
276
A
HIS
106
1
Y
1
A
ALA
277
A
ALA
107
1
Y
1
A
SER
278
A
SER
108
1
Y
1
A
PRO
279
A
PRO
109
1
Y
1
A
MET
280
A
MET
110
1
Y
1
A
SER
281
A
SER
111
1
Y
1
A
ALA
282
A
ALA
112
1
Y
1
A
ASP
283
A
ASP
113
1
Y
1
A
ARG
284
A
ARG
114
1
Y
1
A
VAL
285
A
VAL
115
1
Y
1
A
TRP
408
A
TRP
238
1
Y
1
A
PRO
409
A
PRO
239
1
Y
1
A
TYR
410
A
TYR
240
1
Y
1
A
MET
411
A
MET
241
1
Y
1
A
ALA
412
A
ALA
242
1
Y
1
A
ILE
413
A
ILE
243
1
Y
1
A
GLN
414
A
GLN
244
1
Y
1
A
A
OE1
NH2
GLU
ARG
225
228
2.04
1
A
A
SER
ASN
172
173
118.76
1
A
A
HIS
VAL
265
266
-144.09
1
A
A
ALA
PRO
267
268
-139.59
1
A
A
PHE
MET
288
289
129.79
1
A
A
GLY
LYS
388
389
30.52
1
A
A
SER
GLY
402
403
133.14
1
A
A
SER
SER
404
405
-142.82
1
A
ARG
397
0.083
SIDE CHAIN
1
-16.49
2.50
121.70
105.21
A
A
A
C
N
CA
PRO
TYR
TYR
190
191
191
Y
1
-12.05
1.50
119.30
107.25
A
A
A
C
N
CA
TYR
PRO
PRO
191
192
192
Y
1
-18.25
2.70
111.00
92.75
A
A
A
N
CA
C
ALA
ALA
ALA
267
267
267
N
1
10.24
1.50
119.30
129.54
A
A
A
C
N
CA
ALA
PRO
PRO
267
268
268
Y
1
-20.85
2.80
113.90
93.05
A
A
A
CB
CG1
CD1
ILE
ILE
ILE
294
294
294
N
1
26.89
2.30
115.30
142.19
A
A
A
CA
CB
CG
LEU
LEU
LEU
305
305
305
N
1
-11.97
1.70
111.00
99.03
A
A
A
CB
CG
CD2
LEU
LEU
LEU
305
305
305
N
1
15.40
2.30
111.70
127.10
A
A
A
CD
CE
NZ
LYS
LYS
LYS
316
316
316
N
1
8.99
1.10
114.20
123.19
A
A
A
CA
CB
SG
CYS
CYS
CYS
326
326
326
A
N
1
9.74
0.90
118.30
128.04
A
A
A
CB
CG
OD1
ASP
ASP
ASP
330
330
330
N
1
-5.83
0.90
118.30
112.47
A
A
A
CB
CG
OD2
ASP
ASP
ASP
330
330
330
N
1
15.33
1.20
111.50
126.83
A
A
A
CB
CA
C
CYS
CYS
CYS
343
343
343
N
1
-21.86
1.80
114.00
92.14
A
A
A
CA
CB
SG
CYS
CYS
CYS
343
343
343
N
1
3.52
0.50
120.30
123.82
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
350
350
350
N
1
3.12
0.50
120.30
123.42
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
366
366
366
N
1
-3.08
0.50
120.30
117.22
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
366
366
366
N
1
13.41
1.70
111.00
124.41
A
A
A
CB
CG
CD2
LEU
LEU
LEU
370
370
370
N
1
-13.85
2.10
111.80
97.95
A
A
A
CG
CD
NE
ARG
ARG
ARG
397
397
397
N
1
-5.05
0.50
120.30
115.25
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
397
397
397
N
1
A
A
CB
OG
SER
SER
222
222
-0.081
0.013
1.418
1.337
N
1
A
A
CD1
CE1
PHE
PHE
288
288
0.163
0.020
1.388
1.551
N
1
A
A
CB
CG2
ILE
ILE
294
294
0.425
0.031
1.524
1.949
N
1
A
A
CB
CG
PHE
PHE
295
295
-0.126
0.017
1.509
1.383
N
1
A
A
CZ
CE2
PHE
PHE
295
295
-0.147
0.019
1.369
1.222
N
1
A
A
CG
CD
GLU
GLU
339
339
-0.155
0.015
1.515
1.360
N
1
A
A
CB
CG
GLN
GLN
342
342
-0.176
0.027
1.521
1.345
N
1
A
A
CA
CB
CYS
CYS
343
343
0.185
0.022
1.535
1.720
N
1
A
A
CB
SG
CYS
CYS
343
343
-0.190
0.016
1.812
1.622
N
1
A
A
CG
CD
GLU
GLU
346
346
-0.092
0.015
1.515
1.423
N
1
A
A
CD
NE
ARG
ARG
397
397
-0.152
0.017
1.460
1.308
N
1
A
SER
174
-20.96
-57.72
1
A
TYR
191
-97.37
-126.43
1
A
ILE
209
39.80
121.63
1
A
PHE
232
79.28
-50.73
1
A
ALA
267
152.14
81.86
1
A
PHE
288
-47.85
-144.78
1
A
MET
289
-169.07
8.78
1
A
LYS
389
96.66
-85.44
1
A
SER
402
-96.68
-143.62
1
A
SER
404
74.45
-154.20
1
A
SER
405
-9.95
142.03
34.493
0.2379
0.1684
1.48
6.00
1919
29483
7.7
1
1.48
6.00
0
1636
0
0
1636
1.48
50.00
3CJW
32718
1
refinement
Murshudov, G.N.
ccp4@dl.ac.uk
Fortran_77
http://www.ccp4.ac.uk/main.html
REFMAC
program
data extraction
PDB
sw-help@rcsb.rutgers.edu
September 10, 2007
C++
http://pdb.rutgers.edu/software/
PDB_EXTRACT
package
3.004
Crystal structure of the human COUP-TFII ligand binding domain
1
N
N
A
ASN
173
A
ASN
3
HELX_P
A
ALA
188
A
ALA
18
1
1
16
A
ASN
211
A
ASN
41
HELX_P
A
ILE
230
A
ILE
60
1
2
20
A
PHE
232
A
PHE
62
HELX_P
A
LEU
236
A
LEU
66
5
3
5
A
GLN
237
A
GLN
67
HELX_P
A
SER
261
A
SER
91
1
4
25
A
MET
289
A
MET
119
HELX_P
A
LEU
305
A
LEU
135
1
5
17
A
ASP
308
A
ASP
138
HELX_P
A
PHE
321
A
PHE
151
1
6
14
A
ASP
330
A
ASP
160
HELX_P
A
TYR
353
A
TYR
183
1
7
24
A
THR
358
A
THR
188
HELX_P
A
LEU
365
A
LEU
195
1
8
8
A
ARG
366
A
ARG
196
HELX_P
A
VAL
373
A
VAL
203
1
9
8
A
SER
374
A
SER
204
HELX_P
A
PHE
383
A
PHE
213
1
10
10
A
PHE
383
A
PHE
213
HELX_P
A
GLY
388
A
GLY
218
1
11
6
A
PRO
391
A
PRO
221
HELX_P
A
THR
394
A
THR
224
5
12
4
A
LEU
395
A
LEU
225
HELX_P
A
LEU
401
A
LEU
231
1
13
7
TRANSCRIPTION
COUP-TFII, nuclear receptor, ligand binding domain, orphan receptor, three-layered helical sandwich, DNA-binding, Metal-binding, Nucleus, Receptor, Transcription, Transcription regulation, Zinc, Zinc-finger
COT2_HUMAN
UNP
1
173
P24468
HSYLSGYISLLLRAEPYPTSRFGSQCMQPNNIMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLTWSELFV
LNAAQCSMPLHVAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDVAHV
ESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDMLLSGSSFNWPYMAIQ
173
412
3CJW
175
414
P24468
A
1
5
244
1
expression tag
GLY
171
3CJW
A
P24468
UNP
1
1
expression tag
SER
172
3CJW
A
P24468
UNP
2
1
expression tag
ASN
173
3CJW
A
P24468
UNP
3
1
expression tag
SER
174
3CJW
A
P24468
UNP
4
5
C 1 2 1