.013437
0.000000
0.000000
0.000000
.013437
0.000000
0.000000
0.000000
.027548
0.00000
0.00000
0.00000
Takano, T.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
74.420
74.420
36.300
C2 H4 O
44.053
ACETYL GROUP
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C34 H34 Fe N4 O4
618.503
HEME C
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
77
6371
6375
10.1073/pnas.77.11.6371
6256733
Redox conformation changes in refined tuna cytochrome c.
1980
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
153
79
Conformation Change of Cytochrome C. I. Ferrocytochrome C Structure Refined at 1.5 Angstroms Resolution
1981
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
153
95
Conformation Change of Cytochrome C. II. Ferricytochrome C Refinement at 1.8 Angstroms and Comparison with the Ferrocytochrome Structure
1981
US
Sci.Am.
SCAMAC
0420
0036-8733
242
136
Cytochrome C and the Evolution of Energy Metabolism
1980
UK
Nature
NATUAS
0006
0028-0836
287
659
Internal Mobility of Ferrocytochrome C
1980
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
252
776
Tuna Cytochrome C at 2.0 Angstroms Resolution. II. Ferrocytochrome Structure Analysis
1977
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
252
759
Tuna Cytochrome C at 2.0 Angstroms Resolution. I. Ferricytochrome Structure Analysis
1977
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
248
5234
The Structure of Ferrocytochrome C at 2.45 Angstroms Resolution
1973
US
Sci.Am.
SCAMAC
0420
0036-8733
226
58
The Structure and History of an Ancient Protein
1972
National Biomedical Research Foundation, Silver Spring,Md.
Atlas of Protein Sequence and Structure,Supplement 2
435
0-912466-05-7
5
39
1976
1
ILE O 57 HAS WRONG CHIRALITY AT ATOM CB
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
11416.114
CYTOCHROME C
2
man
polymer
618.503
HEME C
2
syn
non-polymer
18.015
water
51
nat
water
no
yes
(ACE)GDVAKGKKTFVQKCAQCHTVENGGKHKVGPNLWGLFGRKTGQAEGYSYTDANKSKGIVWNNDTLMEYLENPKKYI
PGTKMIFAGIKKKGERQDLVAYLKSATS
XGDVAKGKKTFVQKCAQCHTVENGGKHKVGPNLWGLFGRKTGQAEGYSYTDANKSKGIVWNNDTLMEYLENPKKYIPGTK
MIFAGIKKKGERQDLVAYLKSATS
O,I
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
albacore
Thunnus
sample
8235
Thunnus alalunga
2.20
44.11
pdbx_database_status
struct_conf
struct_conf_type
atom_site
chem_comp
database_PDB_caveat
entity
pdbx_entity_nonpoly
pdbx_nonpoly_scheme
pdbx_struct_conn_angle
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Version format compliance
Derived calculations
Other
Advisory
Atomic model
Data collection
Database references
Derived calculations
Non-polymer description
Structure summary
1
0
1980-09-16
1
1
2008-03-03
1
2
2011-07-13
1
3
2017-11-29
2
0
2021-03-03
_pdbx_database_status.process_site
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.type_symbol
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.id
_chem_comp.name
_chem_comp.pdbx_synonyms
_entity.formula_weight
_entity.pdbx_description
_pdbx_entity_nonpoly.comp_id
_pdbx_entity_nonpoly.name
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.value
_struct_conn.conn_type_id
_struct_conn.id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_ref_seq_dif.details
_struct_site.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
1980-09-16
SPRSDE
Y
BNL
1980-07-01
REL
HEC
HEME C
HOH
water
HEM
1
2
HEC
HEC
104
O
HEM
1
2
HEC
HEC
104
I
HOH
1
3
HOH
HOH
105
O
HOH
2
3
HOH
HOH
106
O
HOH
3
3
HOH
HOH
107
O
HOH
4
3
HOH
HOH
108
O
HOH
5
3
HOH
HOH
109
O
HOH
6
3
HOH
HOH
110
O
HOH
8
3
HOH
HOH
111
O
HOH
9
3
HOH
HOH
112
O
HOH
11
3
HOH
HOH
113
O
HOH
12
3
HOH
HOH
114
O
HOH
13
3
HOH
HOH
115
O
HOH
14
3
HOH
HOH
116
O
HOH
15
3
HOH
HOH
117
O
HOH
16
3
HOH
HOH
118
O
HOH
17
3
HOH
HOH
119
O
HOH
18
3
HOH
HOH
120
O
HOH
19
3
HOH
HOH
121
O
HOH
20
3
HOH
HOH
122
O
HOH
21
3
HOH
HOH
123
O
HOH
22
3
HOH
HOH
124
O
HOH
24
3
HOH
HOH
125
O
HOH
25
3
HOH
HOH
126
O
HOH
26
3
HOH
HOH
127
O
HOH
27
3
HOH
HOH
128
O
HOH
28
3
HOH
HOH
129
O
HOH
30
3
HOH
HOH
130
O
HOH
31
3
HOH
HOH
131
O
HOH
32
3
HOH
HOH
132
O
HOH
33
3
HOH
HOH
133
O
HOH
1
3
HOH
HOH
105
I
HOH
2
3
HOH
HOH
106
I
HOH
3
3
HOH
HOH
107
I
HOH
4
3
HOH
HOH
108
I
HOH
5
3
HOH
HOH
109
I
HOH
6
3
HOH
HOH
110
I
HOH
8
3
HOH
HOH
111
I
HOH
9
3
HOH
HOH
112
I
HOH
11
3
HOH
HOH
113
I
HOH
12
3
HOH
HOH
114
I
HOH
13
3
HOH
HOH
115
I
HOH
14
3
HOH
HOH
116
I
HOH
15
3
HOH
HOH
117
I
HOH
16
3
HOH
HOH
118
I
HOH
19
3
HOH
HOH
119
I
HOH
20
3
HOH
HOH
120
I
HOH
21
3
HOH
HOH
121
I
HOH
22
3
HOH
HOH
122
I
HOH
23
3
HOH
HOH
123
I
HOH
24
3
HOH
HOH
124
I
HOH
25
3
HOH
HOH
125
I
HOH
26
3
HOH
HOH
126
I
ACE
0
n
1
ACE
0
O
GLY
1
n
2
GLY
1
O
ASP
2
n
3
ASP
2
O
VAL
3
n
4
VAL
3
O
ALA
4
n
5
ALA
4
O
LYS
5
n
6
LYS
5
O
GLY
6
n
7
GLY
6
O
LYS
7
n
8
LYS
7
O
LYS
8
n
9
LYS
8
O
THR
9
n
10
THR
9
O
PHE
10
n
11
PHE
10
O
VAL
11
n
12
VAL
11
O
GLN
12
n
13
GLN
12
O
LYS
13
n
14
LYS
13
O
CYS
14
n
15
CYS
14
O
ALA
15
n
16
ALA
15
O
GLN
16
n
17
GLN
16
O
CYS
17
n
18
CYS
17
O
HIS
18
n
19
HIS
18
O
THR
19
n
20
THR
19
O
VAL
20
n
21
VAL
20
O
GLU
21
n
22
GLU
21
O
ASN
22
n
23
ASN
22
O
GLY
23
n
24
GLY
23
O
GLY
24
n
25
GLY
24
O
LYS
25
n
26
LYS
25
O
HIS
26
n
27
HIS
26
O
LYS
27
n
28
LYS
27
O
VAL
28
n
29
VAL
28
O
GLY
29
n
30
GLY
29
O
PRO
30
n
31
PRO
30
O
ASN
31
n
32
ASN
31
O
LEU
32
n
33
LEU
32
O
TRP
33
n
34
TRP
33
O
GLY
34
n
35
GLY
34
O
LEU
35
n
36
LEU
35
O
PHE
36
n
37
PHE
36
O
GLY
37
n
38
GLY
37
O
ARG
38
n
39
ARG
38
O
LYS
39
n
40
LYS
39
O
THR
40
n
41
THR
40
O
GLY
41
n
42
GLY
41
O
GLN
42
n
43
GLN
42
O
ALA
43
n
44
ALA
43
O
GLU
44
n
45
GLU
44
O
GLY
45
n
46
GLY
45
O
TYR
46
n
47
TYR
46
O
SER
47
n
48
SER
47
O
TYR
48
n
49
TYR
48
O
THR
49
n
50
THR
49
O
ASP
50
n
51
ASP
50
O
ALA
51
n
52
ALA
51
O
ASN
52
n
53
ASN
52
O
LYS
53
n
54
LYS
53
O
SER
54
n
55
SER
54
O
LYS
55
n
56
LYS
55
O
GLY
56
n
57
GLY
56
O
ILE
57
n
58
ILE
57
O
VAL
58
n
59
VAL
58
O
TRP
59
n
60
TRP
59
O
ASN
60
n
61
ASN
60
O
ASN
61
n
62
ASN
61
O
ASP
62
n
63
ASP
62
O
THR
63
n
64
THR
63
O
LEU
64
n
65
LEU
64
O
MET
65
n
66
MET
65
O
GLU
66
n
67
GLU
66
O
TYR
67
n
68
TYR
67
O
LEU
68
n
69
LEU
68
O
GLU
69
n
70
GLU
69
O
ASN
70
n
71
ASN
70
O
PRO
71
n
72
PRO
71
O
LYS
72
n
73
LYS
72
O
LYS
73
n
74
LYS
73
O
TYR
74
n
75
TYR
74
O
ILE
75
n
76
ILE
75
O
PRO
76
n
77
PRO
76
O
GLY
77
n
78
GLY
77
O
THR
78
n
79
THR
78
O
LYS
79
n
80
LYS
79
O
MET
80
n
81
MET
80
O
ILE
81
n
82
ILE
81
O
PHE
82
n
83
PHE
82
O
ALA
83
n
84
ALA
83
O
GLY
84
n
85
GLY
84
O
ILE
85
n
86
ILE
85
O
LYS
86
n
87
LYS
86
O
LYS
87
n
88
LYS
87
O
LYS
88
n
89
LYS
88
O
GLY
89
n
90
GLY
89
O
GLU
90
n
91
GLU
90
O
ARG
91
n
92
ARG
91
O
GLN
92
n
93
GLN
92
O
ASP
93
n
94
ASP
93
O
LEU
94
n
95
LEU
94
O
VAL
95
n
96
VAL
95
O
ALA
96
n
97
ALA
96
O
TYR
97
n
98
TYR
97
O
LEU
98
n
99
LEU
98
O
LYS
99
n
100
LYS
99
O
SER
100
n
101
SER
100
O
ALA
101
n
102
ALA
101
O
THR
102
n
103
THR
102
O
SER
103
n
104
SER
103
O
ACE
0
n
1
ACE
0
I
GLY
1
n
2
GLY
1
I
ASP
2
n
3
ASP
2
I
VAL
3
n
4
VAL
3
I
ALA
4
n
5
ALA
4
I
LYS
5
n
6
LYS
5
I
GLY
6
n
7
GLY
6
I
LYS
7
n
8
LYS
7
I
LYS
8
n
9
LYS
8
I
THR
9
n
10
THR
9
I
PHE
10
n
11
PHE
10
I
VAL
11
n
12
VAL
11
I
GLN
12
n
13
GLN
12
I
LYS
13
n
14
LYS
13
I
CYS
14
n
15
CYS
14
I
ALA
15
n
16
ALA
15
I
GLN
16
n
17
GLN
16
I
CYS
17
n
18
CYS
17
I
HIS
18
n
19
HIS
18
I
THR
19
n
20
THR
19
I
VAL
20
n
21
VAL
20
I
GLU
21
n
22
GLU
21
I
ASN
22
n
23
ASN
22
I
GLY
23
n
24
GLY
23
I
GLY
24
n
25
GLY
24
I
LYS
25
n
26
LYS
25
I
HIS
26
n
27
HIS
26
I
LYS
27
n
28
LYS
27
I
VAL
28
n
29
VAL
28
I
GLY
29
n
30
GLY
29
I
PRO
30
n
31
PRO
30
I
ASN
31
n
32
ASN
31
I
LEU
32
n
33
LEU
32
I
TRP
33
n
34
TRP
33
I
GLY
34
n
35
GLY
34
I
LEU
35
n
36
LEU
35
I
PHE
36
n
37
PHE
36
I
GLY
37
n
38
GLY
37
I
ARG
38
n
39
ARG
38
I
LYS
39
n
40
LYS
39
I
THR
40
n
41
THR
40
I
GLY
41
n
42
GLY
41
I
GLN
42
n
43
GLN
42
I
ALA
43
n
44
ALA
43
I
GLU
44
n
45
GLU
44
I
GLY
45
n
46
GLY
45
I
TYR
46
n
47
TYR
46
I
SER
47
n
48
SER
47
I
TYR
48
n
49
TYR
48
I
THR
49
n
50
THR
49
I
ASP
50
n
51
ASP
50
I
ALA
51
n
52
ALA
51
I
ASN
52
n
53
ASN
52
I
LYS
53
n
54
LYS
53
I
SER
54
n
55
SER
54
I
LYS
55
n
56
LYS
55
I
GLY
56
n
57
GLY
56
I
ILE
57
n
58
ILE
57
I
VAL
58
n
59
VAL
58
I
TRP
59
n
60
TRP
59
I
ASN
60
n
61
ASN
60
I
ASN
61
n
62
ASN
61
I
ASP
62
n
63
ASP
62
I
THR
63
n
64
THR
63
I
LEU
64
n
65
LEU
64
I
MET
65
n
66
MET
65
I
GLU
66
n
67
GLU
66
I
TYR
67
n
68
TYR
67
I
LEU
68
n
69
LEU
68
I
GLU
69
n
70
GLU
69
I
ASN
70
n
71
ASN
70
I
PRO
71
n
72
PRO
71
I
LYS
72
n
73
LYS
72
I
LYS
73
n
74
LYS
73
I
TYR
74
n
75
TYR
74
I
ILE
75
n
76
ILE
75
I
PRO
76
n
77
PRO
76
I
GLY
77
n
78
GLY
77
I
THR
78
n
79
THR
78
I
LYS
79
n
80
LYS
79
I
MET
80
n
81
MET
80
I
ILE
81
n
82
ILE
81
I
PHE
82
n
83
PHE
82
I
ALA
83
n
84
ALA
83
I
GLY
84
n
85
GLY
84
I
ILE
85
n
86
ILE
85
I
LYS
86
n
87
LYS
86
I
LYS
87
n
88
LYS
87
I
LYS
88
n
89
LYS
88
I
GLY
89
n
90
GLY
89
I
GLU
90
n
91
GLU
90
I
ARG
91
n
92
ARG
91
I
GLN
92
n
93
GLN
92
I
ASP
93
n
94
ASP
93
I
LEU
94
n
95
LEU
94
I
VAL
95
n
96
VAL
95
I
ALA
96
n
97
ALA
96
I
TYR
97
n
98
TYR
97
I
LEU
98
n
99
LEU
98
I
LYS
99
n
100
LYS
99
I
SER
100
n
101
SER
100
I
ALA
101
n
102
ALA
101
I
THR
102
n
103
THR
102
I
SER
103
n
104
SER
103
I
author_defined_assembly
1
monomeric
author_defined_assembly
1
monomeric
O
HIS
18
A
NE2
HIS
19
1_555
O
HEC
104
C
FE
HEC
1_555
O
HEC
104
C
NA
HEC
1_555
88.6
O
HIS
18
A
NE2
HIS
19
1_555
O
HEC
104
C
FE
HEC
1_555
O
HEC
104
C
NB
HEC
1_555
83.7
O
HEC
104
C
NA
HEC
1_555
O
HEC
104
C
FE
HEC
1_555
O
HEC
104
C
NB
HEC
1_555
89.8
O
HIS
18
A
NE2
HIS
19
1_555
O
HEC
104
C
FE
HEC
1_555
O
HEC
104
C
NC
HEC
1_555
96.4
O
HEC
104
C
NA
HEC
1_555
O
HEC
104
C
FE
HEC
1_555
O
HEC
104
C
NC
HEC
1_555
175.0
O
HEC
104
C
NB
HEC
1_555
O
HEC
104
C
FE
HEC
1_555
O
HEC
104
C
NC
HEC
1_555
91.3
O
HIS
18
A
NE2
HIS
19
1_555
O
HEC
104
C
FE
HEC
1_555
O
HEC
104
C
ND
HEC
1_555
94.2
O
HEC
104
C
NA
HEC
1_555
O
HEC
104
C
FE
HEC
1_555
O
HEC
104
C
ND
HEC
1_555
91.7
O
HEC
104
C
NB
HEC
1_555
O
HEC
104
C
FE
HEC
1_555
O
HEC
104
C
ND
HEC
1_555
177.4
O
HEC
104
C
NC
HEC
1_555
O
HEC
104
C
FE
HEC
1_555
O
HEC
104
C
ND
HEC
1_555
87.3
O
HIS
18
A
NE2
HIS
19
1_555
O
HEC
104
C
FE
HEC
1_555
O
MET
80
A
SD
MET
81
1_555
172.9
O
HEC
104
C
NA
HEC
1_555
O
HEC
104
C
FE
HEC
1_555
O
MET
80
A
SD
MET
81
1_555
85.7
O
HEC
104
C
NB
HEC
1_555
O
HEC
104
C
FE
HEC
1_555
O
MET
80
A
SD
MET
81
1_555
100.5
O
HEC
104
C
NC
HEC
1_555
O
HEC
104
C
FE
HEC
1_555
O
MET
80
A
SD
MET
81
1_555
89.3
O
HEC
104
C
ND
HEC
1_555
O
HEC
104
C
FE
HEC
1_555
O
MET
80
A
SD
MET
81
1_555
81.7
I
HIS
18
B
NE2
HIS
19
1_555
I
HEC
104
D
FE
HEC
1_555
I
HEC
104
D
NA
HEC
1_555
86.9
I
HIS
18
B
NE2
HIS
19
1_555
I
HEC
104
D
FE
HEC
1_555
I
HEC
104
D
NB
HEC
1_555
82.3
I
HEC
104
D
NA
HEC
1_555
I
HEC
104
D
FE
HEC
1_555
I
HEC
104
D
NB
HEC
1_555
90.9
I
HIS
18
B
NE2
HIS
19
1_555
I
HEC
104
D
FE
HEC
1_555
I
HEC
104
D
NC
HEC
1_555
96.8
I
HEC
104
D
NA
HEC
1_555
I
HEC
104
D
FE
HEC
1_555
I
HEC
104
D
NC
HEC
1_555
176.0
I
HEC
104
D
NB
HEC
1_555
I
HEC
104
D
FE
HEC
1_555
I
HEC
104
D
NC
HEC
1_555
88.0
I
HIS
18
B
NE2
HIS
19
1_555
I
HEC
104
D
FE
HEC
1_555
I
HEC
104
D
ND
HEC
1_555
94.8
I
HEC
104
D
NA
HEC
1_555
I
HEC
104
D
FE
HEC
1_555
I
HEC
104
D
ND
HEC
1_555
89.1
I
HEC
104
D
NB
HEC
1_555
I
HEC
104
D
FE
HEC
1_555
I
HEC
104
D
ND
HEC
1_555
177.1
I
HEC
104
D
NC
HEC
1_555
I
HEC
104
D
FE
HEC
1_555
I
HEC
104
D
ND
HEC
1_555
92.2
I
HIS
18
B
NE2
HIS
19
1_555
I
HEC
104
D
FE
HEC
1_555
I
MET
80
B
SD
MET
81
1_555
173.0
I
HEC
104
D
NA
HEC
1_555
I
HEC
104
D
FE
HEC
1_555
I
MET
80
B
SD
MET
81
1_555
89.1
I
HEC
104
D
NB
HEC
1_555
I
HEC
104
D
FE
HEC
1_555
I
MET
80
B
SD
MET
81
1_555
103.5
I
HEC
104
D
NC
HEC
1_555
I
HEC
104
D
FE
HEC
1_555
I
MET
80
B
SD
MET
81
1_555
87.4
I
HEC
104
D
ND
HEC
1_555
I
HEC
104
D
FE
HEC
1_555
I
MET
80
B
SD
MET
81
1_555
79.4
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
O
CB
ILE
57
PLANAR
1
I
I
OD1
O
ASP
HOH
2
115
1.67
1
I
I
NZ
O
LYS
HOH
25
110
2.07
1
O
O
OD2
O
ASP
HOH
2
115
2.10
1
O
O
NH2
O
ARG
HOH
38
111
2.14
1
O
HIS
18
-11.60
1
O
PRO
30
-10.67
1
O
GLY
34
12.34
1
O
ILE
85
14.40
1
O
LEU
94
-10.66
1
I
GLY
1
-12.66
1
I
SER
54
11.82
1
I
LYS
55
-12.26
1
I
LYS
73
-10.26
1
I
GLY
77
10.40
1
I
GLY
84
12.76
1
I
ILE
85
12.30
1
I
THR
102
-15.60
1
I
I
THR
SER
102
103
142.95
1
O
GLN
12
0.096
SIDE CHAIN
1
O
ASN
22
0.082
SIDE CHAIN
1
O
ASN
31
0.081
SIDE CHAIN
1
O
ASP
50
0.095
SIDE CHAIN
1
O
ASN
60
0.100
SIDE CHAIN
1
O
ASN
61
0.083
SIDE CHAIN
1
O
ASN
70
0.094
SIDE CHAIN
1
O
GLN
92
0.081
SIDE CHAIN
1
O
ASP
93
0.094
SIDE CHAIN
1
I
GLN
12
0.118
SIDE CHAIN
1
I
GLN
16
0.082
SIDE CHAIN
1
I
GLU
21
0.075
SIDE CHAIN
1
I
ASN
52
0.090
SIDE CHAIN
1
I
GLU
69
0.072
SIDE CHAIN
1
I
ASN
70
0.072
SIDE CHAIN
1
I
GLN
92
0.099
SIDE CHAIN
1
-11.35
1.80
110.60
99.25
O
O
O
N
CA
CB
GLN
GLN
GLN
12
12
12
N
1
14.55
2.20
113.40
127.95
O
O
O
CA
CB
CG
GLN
GLN
GLN
12
12
12
N
1
12.47
1.80
110.60
123.07
O
O
O
N
CA
CB
ARG
ARG
ARG
38
38
38
N
1
8.68
0.50
120.30
128.98
O
O
O
NE
CZ
NH1
ARG
ARG
ARG
38
38
38
N
1
-6.55
0.50
120.30
113.75
O
O
O
NE
CZ
NH2
ARG
ARG
ARG
38
38
38
N
1
-8.69
0.90
118.30
109.61
O
O
O
CB
CG
OD2
ASP
ASP
ASP
50
50
50
N
1
12.71
2.00
110.90
123.61
O
O
O
CA
CB
CG2
ILE
ILE
ILE
85
85
85
N
1
4.58
0.50
120.30
124.88
O
O
O
NE
CZ
NH1
ARG
ARG
ARG
91
91
91
N
1
-6.15
0.50
120.30
114.15
O
O
O
NE
CZ
NH2
ARG
ARG
ARG
91
91
91
N
1
7.42
1.10
119.40
126.82
I
I
I
NH1
CZ
NH2
ARG
ARG
ARG
38
38
38
N
1
-9.67
0.50
120.30
110.63
I
I
I
NE
CZ
NH2
ARG
ARG
ARG
38
38
38
N
1
-6.19
0.90
118.30
112.11
I
I
I
CB
CG
OD2
ASP
ASP
ASP
62
62
62
N
1
-10.84
1.40
123.60
112.76
I
I
I
CD
NE
CZ
ARG
ARG
ARG
91
91
91
N
1
-3.78
0.60
121.00
117.22
I
I
I
CB
CG
CD1
TYR
TYR
TYR
97
97
97
N
1
O
O
NE1
CE2
TRP
TRP
33
33
-0.102
0.013
1.371
1.269
N
1
O
O
NE1
CE2
TRP
TRP
59
59
-0.087
0.013
1.371
1.284
N
1
I
I
NE1
CE2
TRP
TRP
59
59
-0.089
0.013
1.371
1.282
N
1
I
I
NZ
OE2
LYS
GLU
8
44
1.56
1_555
1_556
1
O
O
NZ
OE1
LYS
GLU
8
44
1.65
1_555
1_554
1
O
O
NZ
CD
LYS
GLU
8
44
1.67
1_555
1_554
1
I
I
NZ
CD
LYS
GLU
8
44
2.00
1_555
1_556
1
I
I
NZ
OE1
LYS
GLU
8
44
2.03
1_555
1_556
1
O
O
NZ
OE2
LYS
GLU
8
44
2.11
1_555
1_554
1
O
LYS
27
-105.02
-131.85
1
O
ASN
70
-164.79
87.94
1
O
ILE
75
-116.84
75.71
1
I
LYS
27
-111.90
-128.78
1
I
ASN
70
-159.24
77.04
1.8
1
1.8
51
1743
86
0
1606
CYTOCHROME C (OXIDIZED)
REDOX CONFORMATION CHANGES IN REFINED TUNA CYTOCHROME C
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
THE TRANSFORMATION WHICH WILL PLACE THE COORDINATES OF
THE OXIDIZED OUTER MOLECULE INTO BEST ALIGNMENT WITH THOSE
OF THE OXIDIZED INNER MOLECULE IS GIVEN IN THE MTRIX
RECORDS BELOW.
THE TRANSFORMATION WHICH WILL PLACE THE COORDINATES OF THE
REDUCED MOLECULE (4CYT) INTO BEST ALIGNMENT WITH THOSE OF
THE OXIDIZED INNER MOLECULE IN THE SPACE OF THE LATTER IS
GIVEN BELOW
.2868 .8127 -.5072 47.2662
.5553 -.5724 -.6033 17.5577
-.7806 -.1086 -.6155 16.3160
O
ASP
2
A
ASP
3
HELX_P
O
CYS
14
A
CYS
15
1
NO
13
O
THR
49
A
THR
50
HELX_P
O
LYS
55
A
LYS
56
1
50O
7
O
ASN
60
A
ASN
61
HELX_P
O
GLU
69
A
GLU
70
1
60O
10
O
GLU
69
A
GLU
70
HELX_P
INCOMPLETE DUE TO PRO 76
O
ILE
75
A
ILE
76
1
70O
7
O
LYS
87
A
LYS
88
HELX_P
O
THR
102
A
THR
103
1
CO
16
I
ASP
2
B
ASP
3
HELX_P
I
CYS
14
B
CYS
15
1
NI
13
I
THR
49
B
THR
50
HELX_P
I
LYS
55
B
LYS
56
1
50I
7
I
ASN
60
B
ASN
61
HELX_P
I
GLU
69
B
GLU
70
1
60I
10
I
GLU
69
B
GLU
70
HELX_P
INCOMPLETE DUE TO PRO 76
I
ILE
75
B
ILE
76
1
70I
7
I
LYS
87
B
LYS
88
HELX_P
I
THR
102
B
THR
103
1
CI
16
covale
1.401
both
O
ACE
0
A
C
ACE
1
1_555
O
GLY
1
A
N
GLY
2
1_555
covale
1.769
none
O
CYS
14
A
SG
CYS
15
1_555
O
HEC
104
C
CAB
HEC
1_555
covale
1.799
none
O
CYS
17
A
SG
CYS
18
1_555
O
HEC
104
C
CAC
HEC
1_555
covale
1.359
both
I
ACE
0
B
C
ACE
1
1_555
I
GLY
1
B
N
GLY
2
1_555
covale
1.824
none
I
CYS
14
B
SG
CYS
15
1_555
I
HEC
104
D
CAB
HEC
1_555
covale
1.779
none
I
CYS
17
B
SG
CYS
18
1_555
I
HEC
104
D
CAC
HEC
1_555
metalc
1.957
O
HIS
18
A
NE2
HIS
19
1_555
O
HEC
104
C
FE
HEC
1_555
metalc
2.283
O
MET
80
A
SD
MET
81
1_555
O
HEC
104
C
FE
HEC
1_555
metalc
2.041
I
HIS
18
B
NE2
HIS
19
1_555
I
HEC
104
D
FE
HEC
1_555
metalc
2.260
I
MET
80
B
SD
MET
81
1_555
I
HEC
104
D
FE
HEC
1_555
ELECTRON TRANSPORT (HEME PROTEIN)
ELECTRON TRANSPORT (HEME PROTEIN)
given
-.394400
-.918900
-.002900
-.918800
.394400
-.016400
.016200
-.003800
-.999900
37.05570
37.56070
17.83470
CYC_THUAA
UNP
1
1
P81459
GDVAKGKKTFVQKCAQCHTVENGGKHKVGPNLWGLFGRKTGQAEGYSYTDANKSKGIVWNENTLMEYLENPKKYIPGTKM
IFAGIKKKGERQDLVAYLKSATS
1
103
3CYT
1
103
P81459
O
1
2
104
1
103
3CYT
1
103
P81459
I
1
2
104
1
GLU
conflict
ASN
61
3CYT
O
P81459
UNP
61
62
1
ASN
conflict
ASP
62
3CYT
O
P81459
UNP
62
63
2
GLU
conflict
ASN
61
3CYT
I
P81459
UNP
61
62
2
ASN
conflict
ASP
62
3CYT
I
P81459
UNP
62
63
BINDING SITE FOR RESIDUE HEC O 104
O
HEC
104
Software
22
BINDING SITE FOR RESIDUE HEC I 104
I
HEC
104
Software
20
O
LYS
13
A
LYS
14
22
1_555
O
CYS
14
A
CYS
15
22
1_555
O
CYS
17
A
CYS
18
22
1_555
O
HIS
18
A
HIS
19
22
1_555
O
VAL
28
A
VAL
29
22
1_555
O
GLY
29
A
GLY
30
22
1_555
O
PRO
30
A
PRO
31
22
1_555
O
ARG
38
A
ARG
39
22
1_555
O
THR
40
A
THR
41
22
1_555
O
GLY
41
A
GLY
42
22
1_555
O
TYR
46
A
TYR
47
22
1_555
O
TYR
48
A
TYR
49
22
1_555
O
THR
49
A
THR
50
22
1_555
O
ASN
52
A
ASN
53
22
1_555
O
LYS
55
A
LYS
56
22
3_554
O
TRP
59
A
TRP
60
22
1_555
O
TYR
67
A
TYR
68
22
1_555
O
THR
78
A
THR
79
22
1_555
O
LYS
79
A
LYS
80
22
1_555
O
MET
80
A
MET
81
22
1_555
O
PHE
82
A
PHE
83
22
1_555
O
HOH
121
E
HOH
22
1_555
I
LYS
13
B
LYS
14
20
1_555
I
CYS
14
B
CYS
15
20
1_555
I
CYS
17
B
CYS
18
20
1_555
I
HIS
18
B
HIS
19
20
1_555
I
VAL
28
B
VAL
29
20
1_555
I
GLY
29
B
GLY
30
20
1_555
I
THR
40
B
THR
41
20
1_555
I
GLY
41
B
GLY
42
20
1_555
I
TYR
46
B
TYR
47
20
1_555
I
TYR
48
B
TYR
49
20
1_555
I
THR
49
B
THR
50
20
1_555
I
ASN
52
B
ASN
53
20
1_555
I
LYS
55
B
LYS
56
20
4_565
I
TRP
59
B
TRP
60
20
1_555
I
TYR
67
B
TYR
68
20
1_555
I
THR
78
B
THR
79
20
1_555
I
LYS
79
B
LYS
80
20
1_555
I
MET
80
B
MET
81
20
1_555
I
PHE
82
B
PHE
83
20
1_555
I
HOH
119
F
HOH
20
1_555
78
P 43