.013437 0.000000 0.000000 0.000000 .013437 0.000000 0.000000 0.000000 .027548 0.00000 0.00000 0.00000 Takano, T. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 74.420 74.420 36.300 C2 H4 O 44.053 ACETYL GROUP non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C34 H34 Fe N4 O4 618.503 HEME C non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 77 6371 6375 10.1073/pnas.77.11.6371 6256733 Redox conformation changes in refined tuna cytochrome c. 1980 UK J.Mol.Biol. JMOBAK 0070 0022-2836 153 79 Conformation Change of Cytochrome C. I. Ferrocytochrome C Structure Refined at 1.5 Angstroms Resolution 1981 UK J.Mol.Biol. JMOBAK 0070 0022-2836 153 95 Conformation Change of Cytochrome C. II. Ferricytochrome C Refinement at 1.8 Angstroms and Comparison with the Ferrocytochrome Structure 1981 US Sci.Am. SCAMAC 0420 0036-8733 242 136 Cytochrome C and the Evolution of Energy Metabolism 1980 UK Nature NATUAS 0006 0028-0836 287 659 Internal Mobility of Ferrocytochrome C 1980 US J.Biol.Chem. JBCHA3 0071 0021-9258 252 776 Tuna Cytochrome C at 2.0 Angstroms Resolution. II. Ferrocytochrome Structure Analysis 1977 US J.Biol.Chem. JBCHA3 0071 0021-9258 252 759 Tuna Cytochrome C at 2.0 Angstroms Resolution. I. Ferricytochrome Structure Analysis 1977 US J.Biol.Chem. JBCHA3 0071 0021-9258 248 5234 The Structure of Ferrocytochrome C at 2.45 Angstroms Resolution 1973 US Sci.Am. SCAMAC 0420 0036-8733 226 58 The Structure and History of an Ancient Protein 1972 National Biomedical Research Foundation, Silver Spring,Md. Atlas of Protein Sequence and Structure,Supplement 2 435 0-912466-05-7 5 39 1976 1 ILE O 57 HAS WRONG CHIRALITY AT ATOM CB 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 11416.114 CYTOCHROME C 2 man polymer 618.503 HEME C 2 syn non-polymer 18.015 water 51 nat water no yes (ACE)GDVAKGKKTFVQKCAQCHTVENGGKHKVGPNLWGLFGRKTGQAEGYSYTDANKSKGIVWNNDTLMEYLENPKKYI PGTKMIFAGIKKKGERQDLVAYLKSATS XGDVAKGKKTFVQKCAQCHTVENGGKHKVGPNLWGLFGRKTGQAEGYSYTDANKSKGIVWNNDTLMEYLENPKKYIPGTK MIFAGIKKKGERQDLVAYLKSATS O,I polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n albacore Thunnus sample 8235 Thunnus alalunga 2.20 44.11 pdbx_database_status struct_conf struct_conf_type atom_site chem_comp database_PDB_caveat entity pdbx_entity_nonpoly pdbx_nonpoly_scheme pdbx_struct_conn_angle struct_conn struct_ref_seq_dif struct_site repository Initial release Version format compliance Version format compliance Derived calculations Other Advisory Atomic model Data collection Database references Derived calculations Non-polymer description Structure summary 1 0 1980-09-16 1 1 2008-03-03 1 2 2011-07-13 1 3 2017-11-29 2 0 2021-03-03 _pdbx_database_status.process_site _atom_site.B_iso_or_equiv _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.type_symbol _chem_comp.formula _chem_comp.formula_weight _chem_comp.id _chem_comp.name _chem_comp.pdbx_synonyms _entity.formula_weight _entity.pdbx_description _pdbx_entity_nonpoly.comp_id _pdbx_entity_nonpoly.name _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.value _struct_conn.conn_type_id _struct_conn.id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_ref_seq_dif.details _struct_site.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id 1980-09-16 SPRSDE Y BNL 1980-07-01 REL HEC HEME C HOH water HEM 1 2 HEC HEC 104 O HEM 1 2 HEC HEC 104 I HOH 1 3 HOH HOH 105 O HOH 2 3 HOH HOH 106 O HOH 3 3 HOH HOH 107 O HOH 4 3 HOH HOH 108 O HOH 5 3 HOH HOH 109 O HOH 6 3 HOH HOH 110 O HOH 8 3 HOH HOH 111 O HOH 9 3 HOH HOH 112 O HOH 11 3 HOH HOH 113 O HOH 12 3 HOH HOH 114 O HOH 13 3 HOH HOH 115 O HOH 14 3 HOH HOH 116 O HOH 15 3 HOH HOH 117 O HOH 16 3 HOH HOH 118 O HOH 17 3 HOH HOH 119 O HOH 18 3 HOH HOH 120 O HOH 19 3 HOH HOH 121 O HOH 20 3 HOH HOH 122 O HOH 21 3 HOH HOH 123 O HOH 22 3 HOH HOH 124 O HOH 24 3 HOH HOH 125 O HOH 25 3 HOH HOH 126 O HOH 26 3 HOH HOH 127 O HOH 27 3 HOH HOH 128 O HOH 28 3 HOH HOH 129 O HOH 30 3 HOH HOH 130 O HOH 31 3 HOH HOH 131 O HOH 32 3 HOH HOH 132 O HOH 33 3 HOH HOH 133 O HOH 1 3 HOH HOH 105 I HOH 2 3 HOH HOH 106 I HOH 3 3 HOH HOH 107 I HOH 4 3 HOH HOH 108 I HOH 5 3 HOH HOH 109 I HOH 6 3 HOH HOH 110 I HOH 8 3 HOH HOH 111 I HOH 9 3 HOH HOH 112 I HOH 11 3 HOH HOH 113 I HOH 12 3 HOH HOH 114 I HOH 13 3 HOH HOH 115 I HOH 14 3 HOH HOH 116 I HOH 15 3 HOH HOH 117 I HOH 16 3 HOH HOH 118 I HOH 19 3 HOH HOH 119 I HOH 20 3 HOH HOH 120 I HOH 21 3 HOH HOH 121 I HOH 22 3 HOH HOH 122 I HOH 23 3 HOH HOH 123 I HOH 24 3 HOH HOH 124 I HOH 25 3 HOH HOH 125 I HOH 26 3 HOH HOH 126 I ACE 0 n 1 ACE 0 O GLY 1 n 2 GLY 1 O ASP 2 n 3 ASP 2 O VAL 3 n 4 VAL 3 O ALA 4 n 5 ALA 4 O LYS 5 n 6 LYS 5 O GLY 6 n 7 GLY 6 O LYS 7 n 8 LYS 7 O LYS 8 n 9 LYS 8 O THR 9 n 10 THR 9 O PHE 10 n 11 PHE 10 O VAL 11 n 12 VAL 11 O GLN 12 n 13 GLN 12 O LYS 13 n 14 LYS 13 O CYS 14 n 15 CYS 14 O ALA 15 n 16 ALA 15 O GLN 16 n 17 GLN 16 O CYS 17 n 18 CYS 17 O HIS 18 n 19 HIS 18 O THR 19 n 20 THR 19 O VAL 20 n 21 VAL 20 O GLU 21 n 22 GLU 21 O ASN 22 n 23 ASN 22 O GLY 23 n 24 GLY 23 O GLY 24 n 25 GLY 24 O LYS 25 n 26 LYS 25 O HIS 26 n 27 HIS 26 O LYS 27 n 28 LYS 27 O VAL 28 n 29 VAL 28 O GLY 29 n 30 GLY 29 O PRO 30 n 31 PRO 30 O ASN 31 n 32 ASN 31 O LEU 32 n 33 LEU 32 O TRP 33 n 34 TRP 33 O GLY 34 n 35 GLY 34 O LEU 35 n 36 LEU 35 O PHE 36 n 37 PHE 36 O GLY 37 n 38 GLY 37 O ARG 38 n 39 ARG 38 O LYS 39 n 40 LYS 39 O THR 40 n 41 THR 40 O GLY 41 n 42 GLY 41 O GLN 42 n 43 GLN 42 O ALA 43 n 44 ALA 43 O GLU 44 n 45 GLU 44 O GLY 45 n 46 GLY 45 O TYR 46 n 47 TYR 46 O SER 47 n 48 SER 47 O TYR 48 n 49 TYR 48 O THR 49 n 50 THR 49 O ASP 50 n 51 ASP 50 O ALA 51 n 52 ALA 51 O ASN 52 n 53 ASN 52 O LYS 53 n 54 LYS 53 O SER 54 n 55 SER 54 O LYS 55 n 56 LYS 55 O GLY 56 n 57 GLY 56 O ILE 57 n 58 ILE 57 O VAL 58 n 59 VAL 58 O TRP 59 n 60 TRP 59 O ASN 60 n 61 ASN 60 O ASN 61 n 62 ASN 61 O ASP 62 n 63 ASP 62 O THR 63 n 64 THR 63 O LEU 64 n 65 LEU 64 O MET 65 n 66 MET 65 O GLU 66 n 67 GLU 66 O TYR 67 n 68 TYR 67 O LEU 68 n 69 LEU 68 O GLU 69 n 70 GLU 69 O ASN 70 n 71 ASN 70 O PRO 71 n 72 PRO 71 O LYS 72 n 73 LYS 72 O LYS 73 n 74 LYS 73 O TYR 74 n 75 TYR 74 O ILE 75 n 76 ILE 75 O PRO 76 n 77 PRO 76 O GLY 77 n 78 GLY 77 O THR 78 n 79 THR 78 O LYS 79 n 80 LYS 79 O MET 80 n 81 MET 80 O ILE 81 n 82 ILE 81 O PHE 82 n 83 PHE 82 O ALA 83 n 84 ALA 83 O GLY 84 n 85 GLY 84 O ILE 85 n 86 ILE 85 O LYS 86 n 87 LYS 86 O LYS 87 n 88 LYS 87 O LYS 88 n 89 LYS 88 O GLY 89 n 90 GLY 89 O GLU 90 n 91 GLU 90 O ARG 91 n 92 ARG 91 O GLN 92 n 93 GLN 92 O ASP 93 n 94 ASP 93 O LEU 94 n 95 LEU 94 O VAL 95 n 96 VAL 95 O ALA 96 n 97 ALA 96 O TYR 97 n 98 TYR 97 O LEU 98 n 99 LEU 98 O LYS 99 n 100 LYS 99 O SER 100 n 101 SER 100 O ALA 101 n 102 ALA 101 O THR 102 n 103 THR 102 O SER 103 n 104 SER 103 O ACE 0 n 1 ACE 0 I GLY 1 n 2 GLY 1 I ASP 2 n 3 ASP 2 I VAL 3 n 4 VAL 3 I ALA 4 n 5 ALA 4 I LYS 5 n 6 LYS 5 I GLY 6 n 7 GLY 6 I LYS 7 n 8 LYS 7 I LYS 8 n 9 LYS 8 I THR 9 n 10 THR 9 I PHE 10 n 11 PHE 10 I VAL 11 n 12 VAL 11 I GLN 12 n 13 GLN 12 I LYS 13 n 14 LYS 13 I CYS 14 n 15 CYS 14 I ALA 15 n 16 ALA 15 I GLN 16 n 17 GLN 16 I CYS 17 n 18 CYS 17 I HIS 18 n 19 HIS 18 I THR 19 n 20 THR 19 I VAL 20 n 21 VAL 20 I GLU 21 n 22 GLU 21 I ASN 22 n 23 ASN 22 I GLY 23 n 24 GLY 23 I GLY 24 n 25 GLY 24 I LYS 25 n 26 LYS 25 I HIS 26 n 27 HIS 26 I LYS 27 n 28 LYS 27 I VAL 28 n 29 VAL 28 I GLY 29 n 30 GLY 29 I PRO 30 n 31 PRO 30 I ASN 31 n 32 ASN 31 I LEU 32 n 33 LEU 32 I TRP 33 n 34 TRP 33 I GLY 34 n 35 GLY 34 I LEU 35 n 36 LEU 35 I PHE 36 n 37 PHE 36 I GLY 37 n 38 GLY 37 I ARG 38 n 39 ARG 38 I LYS 39 n 40 LYS 39 I THR 40 n 41 THR 40 I GLY 41 n 42 GLY 41 I GLN 42 n 43 GLN 42 I ALA 43 n 44 ALA 43 I GLU 44 n 45 GLU 44 I GLY 45 n 46 GLY 45 I TYR 46 n 47 TYR 46 I SER 47 n 48 SER 47 I TYR 48 n 49 TYR 48 I THR 49 n 50 THR 49 I ASP 50 n 51 ASP 50 I ALA 51 n 52 ALA 51 I ASN 52 n 53 ASN 52 I LYS 53 n 54 LYS 53 I SER 54 n 55 SER 54 I LYS 55 n 56 LYS 55 I GLY 56 n 57 GLY 56 I ILE 57 n 58 ILE 57 I VAL 58 n 59 VAL 58 I TRP 59 n 60 TRP 59 I ASN 60 n 61 ASN 60 I ASN 61 n 62 ASN 61 I ASP 62 n 63 ASP 62 I THR 63 n 64 THR 63 I LEU 64 n 65 LEU 64 I MET 65 n 66 MET 65 I GLU 66 n 67 GLU 66 I TYR 67 n 68 TYR 67 I LEU 68 n 69 LEU 68 I GLU 69 n 70 GLU 69 I ASN 70 n 71 ASN 70 I PRO 71 n 72 PRO 71 I LYS 72 n 73 LYS 72 I LYS 73 n 74 LYS 73 I TYR 74 n 75 TYR 74 I ILE 75 n 76 ILE 75 I PRO 76 n 77 PRO 76 I GLY 77 n 78 GLY 77 I THR 78 n 79 THR 78 I LYS 79 n 80 LYS 79 I MET 80 n 81 MET 80 I ILE 81 n 82 ILE 81 I PHE 82 n 83 PHE 82 I ALA 83 n 84 ALA 83 I GLY 84 n 85 GLY 84 I ILE 85 n 86 ILE 85 I LYS 86 n 87 LYS 86 I LYS 87 n 88 LYS 87 I LYS 88 n 89 LYS 88 I GLY 89 n 90 GLY 89 I GLU 90 n 91 GLU 90 I ARG 91 n 92 ARG 91 I GLN 92 n 93 GLN 92 I ASP 93 n 94 ASP 93 I LEU 94 n 95 LEU 94 I VAL 95 n 96 VAL 95 I ALA 96 n 97 ALA 96 I TYR 97 n 98 TYR 97 I LEU 98 n 99 LEU 98 I LYS 99 n 100 LYS 99 I SER 100 n 101 SER 100 I ALA 101 n 102 ALA 101 I THR 102 n 103 THR 102 I SER 103 n 104 SER 103 I author_defined_assembly 1 monomeric author_defined_assembly 1 monomeric O HIS 18 A NE2 HIS 19 1_555 O HEC 104 C FE HEC 1_555 O HEC 104 C NA HEC 1_555 88.6 O HIS 18 A NE2 HIS 19 1_555 O HEC 104 C FE HEC 1_555 O HEC 104 C NB HEC 1_555 83.7 O HEC 104 C NA HEC 1_555 O HEC 104 C FE HEC 1_555 O HEC 104 C NB HEC 1_555 89.8 O HIS 18 A NE2 HIS 19 1_555 O HEC 104 C FE HEC 1_555 O HEC 104 C NC HEC 1_555 96.4 O HEC 104 C NA HEC 1_555 O HEC 104 C FE HEC 1_555 O HEC 104 C NC HEC 1_555 175.0 O HEC 104 C NB HEC 1_555 O HEC 104 C FE HEC 1_555 O HEC 104 C NC HEC 1_555 91.3 O HIS 18 A NE2 HIS 19 1_555 O HEC 104 C FE HEC 1_555 O HEC 104 C ND HEC 1_555 94.2 O HEC 104 C NA HEC 1_555 O HEC 104 C FE HEC 1_555 O HEC 104 C ND HEC 1_555 91.7 O HEC 104 C NB HEC 1_555 O HEC 104 C FE HEC 1_555 O HEC 104 C ND HEC 1_555 177.4 O HEC 104 C NC HEC 1_555 O HEC 104 C FE HEC 1_555 O HEC 104 C ND HEC 1_555 87.3 O HIS 18 A NE2 HIS 19 1_555 O HEC 104 C FE HEC 1_555 O MET 80 A SD MET 81 1_555 172.9 O HEC 104 C NA HEC 1_555 O HEC 104 C FE HEC 1_555 O MET 80 A SD MET 81 1_555 85.7 O HEC 104 C NB HEC 1_555 O HEC 104 C FE HEC 1_555 O MET 80 A SD MET 81 1_555 100.5 O HEC 104 C NC HEC 1_555 O HEC 104 C FE HEC 1_555 O MET 80 A SD MET 81 1_555 89.3 O HEC 104 C ND HEC 1_555 O HEC 104 C FE HEC 1_555 O MET 80 A SD MET 81 1_555 81.7 I HIS 18 B NE2 HIS 19 1_555 I HEC 104 D FE HEC 1_555 I HEC 104 D NA HEC 1_555 86.9 I HIS 18 B NE2 HIS 19 1_555 I HEC 104 D FE HEC 1_555 I HEC 104 D NB HEC 1_555 82.3 I HEC 104 D NA HEC 1_555 I HEC 104 D FE HEC 1_555 I HEC 104 D NB HEC 1_555 90.9 I HIS 18 B NE2 HIS 19 1_555 I HEC 104 D FE HEC 1_555 I HEC 104 D NC HEC 1_555 96.8 I HEC 104 D NA HEC 1_555 I HEC 104 D FE HEC 1_555 I HEC 104 D NC HEC 1_555 176.0 I HEC 104 D NB HEC 1_555 I HEC 104 D FE HEC 1_555 I HEC 104 D NC HEC 1_555 88.0 I HIS 18 B NE2 HIS 19 1_555 I HEC 104 D FE HEC 1_555 I HEC 104 D ND HEC 1_555 94.8 I HEC 104 D NA HEC 1_555 I HEC 104 D FE HEC 1_555 I HEC 104 D ND HEC 1_555 89.1 I HEC 104 D NB HEC 1_555 I HEC 104 D FE HEC 1_555 I HEC 104 D ND HEC 1_555 177.1 I HEC 104 D NC HEC 1_555 I HEC 104 D FE HEC 1_555 I HEC 104 D ND HEC 1_555 92.2 I HIS 18 B NE2 HIS 19 1_555 I HEC 104 D FE HEC 1_555 I MET 80 B SD MET 81 1_555 173.0 I HEC 104 D NA HEC 1_555 I HEC 104 D FE HEC 1_555 I MET 80 B SD MET 81 1_555 89.1 I HEC 104 D NB HEC 1_555 I HEC 104 D FE HEC 1_555 I MET 80 B SD MET 81 1_555 103.5 I HEC 104 D NC HEC 1_555 I HEC 104 D FE HEC 1_555 I MET 80 B SD MET 81 1_555 87.4 I HEC 104 D ND HEC 1_555 I HEC 104 D FE HEC 1_555 I MET 80 B SD MET 81 1_555 79.4 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 O CB ILE 57 PLANAR 1 I I OD1 O ASP HOH 2 115 1.67 1 I I NZ O LYS HOH 25 110 2.07 1 O O OD2 O ASP HOH 2 115 2.10 1 O O NH2 O ARG HOH 38 111 2.14 1 O HIS 18 -11.60 1 O PRO 30 -10.67 1 O GLY 34 12.34 1 O ILE 85 14.40 1 O LEU 94 -10.66 1 I GLY 1 -12.66 1 I SER 54 11.82 1 I LYS 55 -12.26 1 I LYS 73 -10.26 1 I GLY 77 10.40 1 I GLY 84 12.76 1 I ILE 85 12.30 1 I THR 102 -15.60 1 I I THR SER 102 103 142.95 1 O GLN 12 0.096 SIDE CHAIN 1 O ASN 22 0.082 SIDE CHAIN 1 O ASN 31 0.081 SIDE CHAIN 1 O ASP 50 0.095 SIDE CHAIN 1 O ASN 60 0.100 SIDE CHAIN 1 O ASN 61 0.083 SIDE CHAIN 1 O ASN 70 0.094 SIDE CHAIN 1 O GLN 92 0.081 SIDE CHAIN 1 O ASP 93 0.094 SIDE CHAIN 1 I GLN 12 0.118 SIDE CHAIN 1 I GLN 16 0.082 SIDE CHAIN 1 I GLU 21 0.075 SIDE CHAIN 1 I ASN 52 0.090 SIDE CHAIN 1 I GLU 69 0.072 SIDE CHAIN 1 I ASN 70 0.072 SIDE CHAIN 1 I GLN 92 0.099 SIDE CHAIN 1 -11.35 1.80 110.60 99.25 O O O N CA CB GLN GLN GLN 12 12 12 N 1 14.55 2.20 113.40 127.95 O O O CA CB CG GLN GLN GLN 12 12 12 N 1 12.47 1.80 110.60 123.07 O O O N CA CB ARG ARG ARG 38 38 38 N 1 8.68 0.50 120.30 128.98 O O O NE CZ NH1 ARG ARG ARG 38 38 38 N 1 -6.55 0.50 120.30 113.75 O O O NE CZ NH2 ARG ARG ARG 38 38 38 N 1 -8.69 0.90 118.30 109.61 O O O CB CG OD2 ASP ASP ASP 50 50 50 N 1 12.71 2.00 110.90 123.61 O O O CA CB CG2 ILE ILE ILE 85 85 85 N 1 4.58 0.50 120.30 124.88 O O O NE CZ NH1 ARG ARG ARG 91 91 91 N 1 -6.15 0.50 120.30 114.15 O O O NE CZ NH2 ARG ARG ARG 91 91 91 N 1 7.42 1.10 119.40 126.82 I I I NH1 CZ NH2 ARG ARG ARG 38 38 38 N 1 -9.67 0.50 120.30 110.63 I I I NE CZ NH2 ARG ARG ARG 38 38 38 N 1 -6.19 0.90 118.30 112.11 I I I CB CG OD2 ASP ASP ASP 62 62 62 N 1 -10.84 1.40 123.60 112.76 I I I CD NE CZ ARG ARG ARG 91 91 91 N 1 -3.78 0.60 121.00 117.22 I I I CB CG CD1 TYR TYR TYR 97 97 97 N 1 O O NE1 CE2 TRP TRP 33 33 -0.102 0.013 1.371 1.269 N 1 O O NE1 CE2 TRP TRP 59 59 -0.087 0.013 1.371 1.284 N 1 I I NE1 CE2 TRP TRP 59 59 -0.089 0.013 1.371 1.282 N 1 I I NZ OE2 LYS GLU 8 44 1.56 1_555 1_556 1 O O NZ OE1 LYS GLU 8 44 1.65 1_555 1_554 1 O O NZ CD LYS GLU 8 44 1.67 1_555 1_554 1 I I NZ CD LYS GLU 8 44 2.00 1_555 1_556 1 I I NZ OE1 LYS GLU 8 44 2.03 1_555 1_556 1 O O NZ OE2 LYS GLU 8 44 2.11 1_555 1_554 1 O LYS 27 -105.02 -131.85 1 O ASN 70 -164.79 87.94 1 O ILE 75 -116.84 75.71 1 I LYS 27 -111.90 -128.78 1 I ASN 70 -159.24 77.04 1.8 1 1.8 51 1743 86 0 1606 CYTOCHROME C (OXIDIZED) REDOX CONFORMATION CHANGES IN REFINED TUNA CYTOCHROME C 1 N N 1 N N 2 N N 2 N N 3 N N 3 N N THE TRANSFORMATION WHICH WILL PLACE THE COORDINATES OF THE OXIDIZED OUTER MOLECULE INTO BEST ALIGNMENT WITH THOSE OF THE OXIDIZED INNER MOLECULE IS GIVEN IN THE MTRIX RECORDS BELOW. THE TRANSFORMATION WHICH WILL PLACE THE COORDINATES OF THE REDUCED MOLECULE (4CYT) INTO BEST ALIGNMENT WITH THOSE OF THE OXIDIZED INNER MOLECULE IN THE SPACE OF THE LATTER IS GIVEN BELOW .2868 .8127 -.5072 47.2662 .5553 -.5724 -.6033 17.5577 -.7806 -.1086 -.6155 16.3160 O ASP 2 A ASP 3 HELX_P O CYS 14 A CYS 15 1 NO 13 O THR 49 A THR 50 HELX_P O LYS 55 A LYS 56 1 50O 7 O ASN 60 A ASN 61 HELX_P O GLU 69 A GLU 70 1 60O 10 O GLU 69 A GLU 70 HELX_P INCOMPLETE DUE TO PRO 76 O ILE 75 A ILE 76 1 70O 7 O LYS 87 A LYS 88 HELX_P O THR 102 A THR 103 1 CO 16 I ASP 2 B ASP 3 HELX_P I CYS 14 B CYS 15 1 NI 13 I THR 49 B THR 50 HELX_P I LYS 55 B LYS 56 1 50I 7 I ASN 60 B ASN 61 HELX_P I GLU 69 B GLU 70 1 60I 10 I GLU 69 B GLU 70 HELX_P INCOMPLETE DUE TO PRO 76 I ILE 75 B ILE 76 1 70I 7 I LYS 87 B LYS 88 HELX_P I THR 102 B THR 103 1 CI 16 covale 1.401 both O ACE 0 A C ACE 1 1_555 O GLY 1 A N GLY 2 1_555 covale 1.769 none O CYS 14 A SG CYS 15 1_555 O HEC 104 C CAB HEC 1_555 covale 1.799 none O CYS 17 A SG CYS 18 1_555 O HEC 104 C CAC HEC 1_555 covale 1.359 both I ACE 0 B C ACE 1 1_555 I GLY 1 B N GLY 2 1_555 covale 1.824 none I CYS 14 B SG CYS 15 1_555 I HEC 104 D CAB HEC 1_555 covale 1.779 none I CYS 17 B SG CYS 18 1_555 I HEC 104 D CAC HEC 1_555 metalc 1.957 O HIS 18 A NE2 HIS 19 1_555 O HEC 104 C FE HEC 1_555 metalc 2.283 O MET 80 A SD MET 81 1_555 O HEC 104 C FE HEC 1_555 metalc 2.041 I HIS 18 B NE2 HIS 19 1_555 I HEC 104 D FE HEC 1_555 metalc 2.260 I MET 80 B SD MET 81 1_555 I HEC 104 D FE HEC 1_555 ELECTRON TRANSPORT (HEME PROTEIN) ELECTRON TRANSPORT (HEME PROTEIN) given -.394400 -.918900 -.002900 -.918800 .394400 -.016400 .016200 -.003800 -.999900 37.05570 37.56070 17.83470 CYC_THUAA UNP 1 1 P81459 GDVAKGKKTFVQKCAQCHTVENGGKHKVGPNLWGLFGRKTGQAEGYSYTDANKSKGIVWNENTLMEYLENPKKYIPGTKM IFAGIKKKGERQDLVAYLKSATS 1 103 3CYT 1 103 P81459 O 1 2 104 1 103 3CYT 1 103 P81459 I 1 2 104 1 GLU conflict ASN 61 3CYT O P81459 UNP 61 62 1 ASN conflict ASP 62 3CYT O P81459 UNP 62 63 2 GLU conflict ASN 61 3CYT I P81459 UNP 61 62 2 ASN conflict ASP 62 3CYT I P81459 UNP 62 63 BINDING SITE FOR RESIDUE HEC O 104 O HEC 104 Software 22 BINDING SITE FOR RESIDUE HEC I 104 I HEC 104 Software 20 O LYS 13 A LYS 14 22 1_555 O CYS 14 A CYS 15 22 1_555 O CYS 17 A CYS 18 22 1_555 O HIS 18 A HIS 19 22 1_555 O VAL 28 A VAL 29 22 1_555 O GLY 29 A GLY 30 22 1_555 O PRO 30 A PRO 31 22 1_555 O ARG 38 A ARG 39 22 1_555 O THR 40 A THR 41 22 1_555 O GLY 41 A GLY 42 22 1_555 O TYR 46 A TYR 47 22 1_555 O TYR 48 A TYR 49 22 1_555 O THR 49 A THR 50 22 1_555 O ASN 52 A ASN 53 22 1_555 O LYS 55 A LYS 56 22 3_554 O TRP 59 A TRP 60 22 1_555 O TYR 67 A TYR 68 22 1_555 O THR 78 A THR 79 22 1_555 O LYS 79 A LYS 80 22 1_555 O MET 80 A MET 81 22 1_555 O PHE 82 A PHE 83 22 1_555 O HOH 121 E HOH 22 1_555 I LYS 13 B LYS 14 20 1_555 I CYS 14 B CYS 15 20 1_555 I CYS 17 B CYS 18 20 1_555 I HIS 18 B HIS 19 20 1_555 I VAL 28 B VAL 29 20 1_555 I GLY 29 B GLY 30 20 1_555 I THR 40 B THR 41 20 1_555 I GLY 41 B GLY 42 20 1_555 I TYR 46 B TYR 47 20 1_555 I TYR 48 B TYR 49 20 1_555 I THR 49 B THR 50 20 1_555 I ASN 52 B ASN 53 20 1_555 I LYS 55 B LYS 56 20 4_565 I TRP 59 B TRP 60 20 1_555 I TYR 67 B TYR 68 20 1_555 I THR 78 B THR 79 20 1_555 I LYS 79 B LYS 80 20 1_555 I MET 80 B MET 81 20 1_555 I PHE 82 B PHE 83 20 1_555 I HOH 119 F HOH 20 1_555 78 P 43