0.017058
0.000000
0.003897
0.000000
0.011837
0.000000
0.000000
0.000000
0.013605
0.00000
0.00000
0.00000
Forouhar, F.
Abashidze, M.
Seetharaman, J.
Mao, L.
Xiao, R.
Maglaqui, M.
Lee, D.
Everett, J.K.
Acton, T.B.
Montelione, G.T.
Tong, L.
Hunt, J.F.
Northeast Structural Genomics Consortium (NESG)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
102.87
90.00
58.622
84.480
75.397
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be Published
0353
Crystal structure of tRNA delta(2)-isopentenylpyrophosphate transferase (SE0981) from Staphylococcus epidermidis.
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
Mirrors
CCD
2008-02-21
MAR CCD 165 mm
Si 111 CHANNEL
SINGLE WAVELENGTH
M
x-ray
1
0.97777
1.0
X4C
NSLS
0.97777
SYNCHROTRON
NSLS BEAMLINE X4C
40363.219
tRNA delta(2)-isopentenylpyrophosphate transferase
2.5.1.8
2
man
polymer
18.015
water
44
nat
water
IPP transferase, Isopentenyl-diphosphate:tRNA isopentenyltransferase, IPTase, IPPT
no
yes
(MSE)TE(MSE)TKPFLIVIVGPTASGKTELSIEVAKKFNGEIISGDS(MSE)QVYQG(MSE)DIGTAKVTTEE(MSE)E
GIPHY(MSE)IDILPPDASFSAYEFKKRAEKYIKDITRRGKVPIIAGGTGLYIQSLLYNYAFEDESISEDK(MSE)KQVK
LKLKELEHLNNNKLHEYLASFDKESAKDIHPNNRKRVLRAIEYYLKTKKLLSSRKKVQQFTENYDTLLIGIE(MSE)SRE
TLYLRINKRVDI(MSE)LGHGLFNEVQHLVEQGFEASQS(MSE)QAIGYKELVPVIKGNIS(MSE)ENAVEKLKQHSRQY
AKRQLTWFKNK(MSE)NVHWLNKER(MSE)SLQ(MSE)(MSE)LDEITTQINKRSSNHDCKRKHPRPSTRELLEHHHHHH
MTEMTKPFLIVIVGPTASGKTELSIEVAKKFNGEIISGDSMQVYQGMDIGTAKVTTEEMEGIPHYMIDILPPDASFSAYE
FKKRAEKYIKDITRRGKVPIIAGGTGLYIQSLLYNYAFEDESISEDKMKQVKLKLKELEHLNNNKLHEYLASFDKESAKD
IHPNNRKRVLRAIEYYLKTKKLLSSRKKVQQFTENYDTLLIGIEMSRETLYLRINKRVDIMLGHGLFNEVQHLVEQGFEA
SQSMQAIGYKELVPVIKGNISMENAVEKLKQHSRQYAKRQLTWFKNKMNVHWLNKERMSLQMMLDEITTQINKRSSNHDC
KRKHPRPSTRELLEHHHHHH
A,B
SeR100
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
12228
miaA, SE_0981
176280
Staphylococcus epidermidis ATCC 12228
Escherichia coli
BL21(DE3)+Magic
Plasmid
pET21
1
2.25
45.44
The structure factor file contains Friedel pairs
VAPOR DIFFUSION, HANGING DROP
6.15
100 mM MES pH 6.15, 18% PEG 3350, 100 mM KSCN, VAPOR DIFFUSION, HANGING DROP, temperature 292K
292
Northeast Structural Genomics Consortium
NESG
PSI, Protein Structure Initiative
software
repository
Initial release
Version format compliance
Refinement description
1
0
2008-07-15
1
1
2011-07-13
1
2
2017-10-25
_software.name
Y
RCSB
Y
RCSB
2008-05-12
REL
REL
HOH
water
HOH
2
2
HOH
HOH
341
A
HOH
6
2
HOH
HOH
342
A
HOH
7
2
HOH
HOH
343
A
HOH
10
2
HOH
HOH
344
A
HOH
13
2
HOH
HOH
345
A
HOH
15
2
HOH
HOH
346
A
HOH
17
2
HOH
HOH
347
A
HOH
21
2
HOH
HOH
348
A
HOH
22
2
HOH
HOH
349
A
HOH
25
2
HOH
HOH
350
A
HOH
26
2
HOH
HOH
351
A
HOH
28
2
HOH
HOH
352
A
HOH
29
2
HOH
HOH
353
A
HOH
31
2
HOH
HOH
354
A
HOH
33
2
HOH
HOH
355
A
HOH
34
2
HOH
HOH
356
A
HOH
35
2
HOH
HOH
357
A
HOH
38
2
HOH
HOH
358
A
HOH
39
2
HOH
HOH
359
A
HOH
40
2
HOH
HOH
360
A
HOH
42
2
HOH
HOH
361
A
HOH
44
2
HOH
HOH
362
A
HOH
1
2
HOH
HOH
341
B
HOH
3
2
HOH
HOH
342
B
HOH
4
2
HOH
HOH
343
B
HOH
5
2
HOH
HOH
344
B
HOH
8
2
HOH
HOH
345
B
HOH
9
2
HOH
HOH
346
B
HOH
11
2
HOH
HOH
347
B
HOH
12
2
HOH
HOH
348
B
HOH
14
2
HOH
HOH
349
B
HOH
16
2
HOH
HOH
350
B
HOH
18
2
HOH
HOH
351
B
HOH
19
2
HOH
HOH
352
B
HOH
20
2
HOH
HOH
353
B
HOH
23
2
HOH
HOH
354
B
HOH
24
2
HOH
HOH
355
B
HOH
27
2
HOH
HOH
356
B
HOH
30
2
HOH
HOH
357
B
HOH
32
2
HOH
HOH
358
B
HOH
36
2
HOH
HOH
359
B
HOH
37
2
HOH
HOH
360
B
HOH
41
2
HOH
HOH
361
B
HOH
43
2
HOH
HOH
362
B
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
n
5
5
A
LYS
6
n
6
LYS
6
A
PRO
7
n
7
PRO
7
A
PHE
8
n
8
PHE
8
A
LEU
9
n
9
LEU
9
A
ILE
10
n
10
ILE
10
A
VAL
11
n
11
VAL
11
A
ILE
12
n
12
ILE
12
A
VAL
13
n
13
VAL
13
A
GLY
14
n
14
GLY
14
A
PRO
15
n
15
PRO
15
A
THR
16
n
16
THR
16
A
ALA
17
n
17
ALA
17
A
SER
18
n
18
SER
18
A
GLY
19
n
19
GLY
19
A
LYS
20
n
20
LYS
20
A
THR
21
n
21
THR
21
A
GLU
22
n
22
GLU
22
A
LEU
23
n
23
LEU
23
A
SER
24
n
24
SER
24
A
ILE
25
n
25
ILE
25
A
GLU
26
n
26
GLU
26
A
VAL
27
n
27
VAL
27
A
ALA
28
n
28
ALA
28
A
LYS
29
n
29
LYS
29
A
LYS
30
n
30
LYS
30
A
PHE
31
n
31
PHE
31
A
ASN
32
n
32
ASN
32
A
GLY
33
n
33
GLY
33
A
GLU
34
n
34
GLU
34
A
ILE
35
n
35
ILE
35
A
ILE
36
n
36
ILE
36
A
SER
37
n
37
SER
37
A
GLY
38
n
38
GLY
38
A
ASP
39
n
39
ASP
39
A
SER
40
n
40
SER
40
A
MSE
41
n
41
MSE
41
A
GLN
42
n
42
GLN
42
A
VAL
43
n
43
VAL
43
A
TYR
44
n
44
TYR
44
A
GLN
45
n
45
GLN
45
A
GLY
46
n
46
GLY
46
A
MSE
47
n
47
MSE
47
A
ASP
48
n
48
ASP
48
A
ILE
49
n
49
ILE
49
A
GLY
50
n
50
GLY
50
A
THR
51
n
51
THR
51
A
ALA
52
n
52
ALA
52
A
LYS
53
n
53
LYS
53
A
VAL
54
n
54
VAL
54
A
THR
55
n
55
THR
55
A
THR
56
n
56
THR
56
A
GLU
57
n
57
GLU
57
A
GLU
58
n
58
GLU
58
A
MSE
59
n
59
MSE
59
A
GLU
60
n
60
GLU
60
A
GLY
61
n
61
GLY
61
A
ILE
62
n
62
ILE
62
A
PRO
63
n
63
PRO
63
A
HIS
64
n
64
HIS
64
A
TYR
65
n
65
TYR
65
A
MSE
66
n
66
MSE
66
A
ILE
67
n
67
ILE
67
A
ASP
68
n
68
ASP
68
A
ILE
69
n
69
ILE
69
A
LEU
70
n
70
LEU
70
A
PRO
71
n
71
PRO
71
A
PRO
72
n
72
PRO
72
A
ASP
73
n
73
ASP
73
A
ALA
74
n
74
ALA
74
A
SER
75
n
75
SER
75
A
PHE
76
n
76
PHE
76
A
SER
77
n
77
SER
77
A
ALA
78
n
78
ALA
78
A
TYR
79
n
79
TYR
79
A
GLU
80
n
80
GLU
80
A
PHE
81
n
81
PHE
81
A
LYS
82
n
82
LYS
82
A
LYS
83
n
83
LYS
83
A
ARG
84
n
84
ARG
84
A
ALA
85
n
85
ALA
85
A
GLU
86
n
86
GLU
86
A
LYS
87
n
87
LYS
87
A
TYR
88
n
88
TYR
88
A
ILE
89
n
89
ILE
89
A
LYS
90
n
90
LYS
90
A
ASP
91
n
91
ASP
91
A
ILE
92
n
92
ILE
92
A
THR
93
n
93
THR
93
A
ARG
94
n
94
ARG
94
A
ARG
95
n
95
ARG
95
A
GLY
96
n
96
GLY
96
A
LYS
97
n
97
LYS
97
A
VAL
98
n
98
VAL
98
A
PRO
99
n
99
PRO
99
A
ILE
100
n
100
ILE
100
A
ILE
101
n
101
ILE
101
A
ALA
102
n
102
ALA
102
A
GLY
103
n
103
GLY
103
A
GLY
104
n
104
GLY
104
A
THR
105
n
105
THR
105
A
GLY
106
n
106
GLY
106
A
LEU
107
n
107
LEU
107
A
TYR
108
n
108
TYR
108
A
ILE
109
n
109
ILE
109
A
GLN
110
n
110
GLN
110
A
SER
111
n
111
SER
111
A
LEU
112
n
112
LEU
112
A
LEU
113
n
113
LEU
113
A
TYR
114
n
114
TYR
114
A
ASN
115
n
115
ASN
115
A
TYR
116
n
116
TYR
116
A
ALA
117
n
117
ALA
117
A
PHE
118
n
118
PHE
118
A
GLU
119
n
119
GLU
119
A
n
120
120
A
n
121
121
A
n
122
122
A
ILE
123
n
123
ILE
123
A
SER
124
n
124
SER
124
A
GLU
125
n
125
GLU
125
A
ASP
126
n
126
ASP
126
A
LYS
127
n
127
LYS
127
A
MSE
128
n
128
MSE
128
A
LYS
129
n
129
LYS
129
A
GLN
130
n
130
GLN
130
A
VAL
131
n
131
VAL
131
A
LYS
132
n
132
LYS
132
A
LEU
133
n
133
LEU
133
A
LYS
134
n
134
LYS
134
A
LEU
135
n
135
LEU
135
A
LYS
136
n
136
LYS
136
A
GLU
137
n
137
GLU
137
A
LEU
138
n
138
LEU
138
A
GLU
139
n
139
GLU
139
A
HIS
140
n
140
HIS
140
A
LEU
141
n
141
LEU
141
A
ASN
142
n
142
ASN
142
A
ASN
143
n
143
ASN
143
A
ASN
144
n
144
ASN
144
A
LYS
145
n
145
LYS
145
A
LEU
146
n
146
LEU
146
A
HIS
147
n
147
HIS
147
A
GLU
148
n
148
GLU
148
A
TYR
149
n
149
TYR
149
A
LEU
150
n
150
LEU
150
A
ALA
151
n
151
ALA
151
A
SER
152
n
152
SER
152
A
PHE
153
n
153
PHE
153
A
ASP
154
n
154
ASP
154
A
LYS
155
n
155
LYS
155
A
GLU
156
n
156
GLU
156
A
SER
157
n
157
SER
157
A
ALA
158
n
158
ALA
158
A
LYS
159
n
159
LYS
159
A
ASP
160
n
160
ASP
160
A
ILE
161
n
161
ILE
161
A
HIS
162
n
162
HIS
162
A
PRO
163
n
163
PRO
163
A
ASN
164
n
164
ASN
164
A
ASN
165
n
165
ASN
165
A
ARG
166
n
166
ARG
166
A
LYS
167
n
167
LYS
167
A
ARG
168
n
168
ARG
168
A
VAL
169
n
169
VAL
169
A
LEU
170
n
170
LEU
170
A
ARG
171
n
171
ARG
171
A
ALA
172
n
172
ALA
172
A
ILE
173
n
173
ILE
173
A
GLU
174
n
174
GLU
174
A
TYR
175
n
175
TYR
175
A
TYR
176
n
176
TYR
176
A
LEU
177
n
177
LEU
177
A
LYS
178
n
178
LYS
178
A
THR
179
n
179
THR
179
A
LYS
180
n
180
LYS
180
A
LYS
181
n
181
LYS
181
A
LEU
182
n
182
LEU
182
A
LEU
183
n
183
LEU
183
A
SER
184
n
184
SER
184
A
SER
185
n
185
SER
185
A
ARG
186
n
186
ARG
186
A
LYS
187
n
187
LYS
187
A
LYS
188
n
188
LYS
188
A
VAL
189
n
189
VAL
189
A
GLN
190
n
190
GLN
190
A
GLN
191
n
191
GLN
191
A
PHE
192
n
192
PHE
192
A
THR
193
n
193
THR
193
A
GLU
194
n
194
GLU
194
A
ASN
195
n
195
ASN
195
A
TYR
196
n
196
TYR
196
A
ASP
197
n
197
ASP
197
A
THR
198
n
198
THR
198
A
LEU
199
n
199
LEU
199
A
LEU
200
n
200
LEU
200
A
ILE
201
n
201
ILE
201
A
GLY
202
n
202
GLY
202
A
ILE
203
n
203
ILE
203
A
GLU
204
n
204
GLU
204
A
MSE
205
n
205
MSE
205
A
SER
206
n
206
SER
206
A
ARG
207
n
207
ARG
207
A
GLU
208
n
208
GLU
208
A
THR
209
n
209
THR
209
A
LEU
210
n
210
LEU
210
A
TYR
211
n
211
TYR
211
A
LEU
212
n
212
LEU
212
A
ARG
213
n
213
ARG
213
A
ILE
214
n
214
ILE
214
A
ASN
215
n
215
ASN
215
A
LYS
216
n
216
LYS
216
A
ARG
217
n
217
ARG
217
A
VAL
218
n
218
VAL
218
A
ASP
219
n
219
ASP
219
A
ILE
220
n
220
ILE
220
A
MSE
221
n
221
MSE
221
A
LEU
222
n
222
LEU
222
A
GLY
223
n
223
GLY
223
A
HIS
224
n
224
HIS
224
A
GLY
225
n
225
GLY
225
A
LEU
226
n
226
LEU
226
A
PHE
227
n
227
PHE
227
A
ASN
228
n
228
ASN
228
A
GLU
229
n
229
GLU
229
A
VAL
230
n
230
VAL
230
A
GLN
231
n
231
GLN
231
A
HIS
232
n
232
HIS
232
A
LEU
233
n
233
LEU
233
A
VAL
234
n
234
VAL
234
A
GLU
235
n
235
GLU
235
A
GLN
236
n
236
GLN
236
A
GLY
237
n
237
GLY
237
A
PHE
238
n
238
PHE
238
A
GLU
239
n
239
GLU
239
A
ALA
240
n
240
ALA
240
A
SER
241
n
241
SER
241
A
GLN
242
n
242
GLN
242
A
SER
243
n
243
SER
243
A
MSE
244
n
244
MSE
244
A
GLN
245
n
245
GLN
245
A
ALA
246
n
246
ALA
246
A
ILE
247
n
247
ILE
247
A
GLY
248
n
248
GLY
248
A
TYR
249
n
249
TYR
249
A
LYS
250
n
250
LYS
250
A
GLU
251
n
251
GLU
251
A
LEU
252
n
252
LEU
252
A
VAL
253
n
253
VAL
253
A
PRO
254
n
254
PRO
254
A
VAL
255
n
255
VAL
255
A
ILE
256
n
256
ILE
256
A
LYS
257
n
257
LYS
257
A
GLY
258
n
258
GLY
258
A
ASN
259
n
259
ASN
259
A
ILE
260
n
260
ILE
260
A
SER
261
n
261
SER
261
A
MSE
262
n
262
MSE
262
A
GLU
263
n
263
GLU
263
A
ASN
264
n
264
ASN
264
A
ALA
265
n
265
ALA
265
A
VAL
266
n
266
VAL
266
A
GLU
267
n
267
GLU
267
A
LYS
268
n
268
LYS
268
A
LEU
269
n
269
LEU
269
A
LYS
270
n
270
LYS
270
A
GLN
271
n
271
GLN
271
A
HIS
272
n
272
HIS
272
A
SER
273
n
273
SER
273
A
ARG
274
n
274
ARG
274
A
GLN
275
n
275
GLN
275
A
TYR
276
n
276
TYR
276
A
ALA
277
n
277
ALA
277
A
LYS
278
n
278
LYS
278
A
ARG
279
n
279
ARG
279
A
GLN
280
n
280
GLN
280
A
LEU
281
n
281
LEU
281
A
THR
282
n
282
THR
282
A
TRP
283
n
283
TRP
283
A
PHE
284
n
284
PHE
284
A
LYS
285
n
285
LYS
285
A
ASN
286
n
286
ASN
286
A
LYS
287
n
287
LYS
287
A
MSE
288
n
288
MSE
288
A
ASN
289
n
289
ASN
289
A
VAL
290
n
290
VAL
290
A
HIS
291
n
291
HIS
291
A
TRP
292
n
292
TRP
292
A
LEU
293
n
293
LEU
293
A
ASN
294
n
294
ASN
294
A
LYS
295
n
295
LYS
295
A
GLU
296
n
296
GLU
296
A
ARG
297
n
297
ARG
297
A
MSE
298
n
298
MSE
298
A
SER
299
n
299
SER
299
A
LEU
300
n
300
LEU
300
A
GLN
301
n
301
GLN
301
A
MSE
302
n
302
MSE
302
A
MSE
303
n
303
MSE
303
A
LEU
304
n
304
LEU
304
A
ASP
305
n
305
ASP
305
A
GLU
306
n
306
GLU
306
A
ILE
307
n
307
ILE
307
A
THR
308
n
308
THR
308
A
THR
309
n
309
THR
309
A
GLN
310
n
310
GLN
310
A
ILE
311
n
311
ILE
311
A
ASN
312
n
312
ASN
312
A
LYS
313
n
313
LYS
313
A
ARG
314
n
314
ARG
314
A
SER
315
n
315
SER
315
A
n
316
316
A
n
317
317
A
n
318
318
A
n
319
319
A
n
320
320
A
n
321
321
A
n
322
322
A
n
323
323
A
n
324
324
A
n
325
325
A
n
326
326
A
n
327
327
A
n
328
328
A
n
329
329
A
n
330
330
A
n
331
331
A
n
332
332
A
n
333
333
A
n
334
334
A
n
335
335
A
n
336
336
A
n
337
337
A
n
338
338
A
n
339
339
A
n
340
340
A
n
1
1
B
n
2
2
B
n
3
3
B
n
4
4
B
n
5
5
B
LYS
6
n
6
LYS
6
B
PRO
7
n
7
PRO
7
B
PHE
8
n
8
PHE
8
B
LEU
9
n
9
LEU
9
B
ILE
10
n
10
ILE
10
B
VAL
11
n
11
VAL
11
B
ILE
12
n
12
ILE
12
B
VAL
13
n
13
VAL
13
B
GLY
14
n
14
GLY
14
B
PRO
15
n
15
PRO
15
B
THR
16
n
16
THR
16
B
ALA
17
n
17
ALA
17
B
SER
18
n
18
SER
18
B
GLY
19
n
19
GLY
19
B
LYS
20
n
20
LYS
20
B
THR
21
n
21
THR
21
B
GLU
22
n
22
GLU
22
B
LEU
23
n
23
LEU
23
B
SER
24
n
24
SER
24
B
ILE
25
n
25
ILE
25
B
GLU
26
n
26
GLU
26
B
VAL
27
n
27
VAL
27
B
ALA
28
n
28
ALA
28
B
LYS
29
n
29
LYS
29
B
LYS
30
n
30
LYS
30
B
PHE
31
n
31
PHE
31
B
ASN
32
n
32
ASN
32
B
GLY
33
n
33
GLY
33
B
GLU
34
n
34
GLU
34
B
ILE
35
n
35
ILE
35
B
ILE
36
n
36
ILE
36
B
SER
37
n
37
SER
37
B
GLY
38
n
38
GLY
38
B
ASP
39
n
39
ASP
39
B
SER
40
n
40
SER
40
B
MSE
41
n
41
MSE
41
B
GLN
42
n
42
GLN
42
B
VAL
43
n
43
VAL
43
B
TYR
44
n
44
TYR
44
B
GLN
45
n
45
GLN
45
B
GLY
46
n
46
GLY
46
B
MSE
47
n
47
MSE
47
B
ASP
48
n
48
ASP
48
B
ILE
49
n
49
ILE
49
B
GLY
50
n
50
GLY
50
B
THR
51
n
51
THR
51
B
ALA
52
n
52
ALA
52
B
LYS
53
n
53
LYS
53
B
VAL
54
n
54
VAL
54
B
THR
55
n
55
THR
55
B
THR
56
n
56
THR
56
B
GLU
57
n
57
GLU
57
B
GLU
58
n
58
GLU
58
B
MSE
59
n
59
MSE
59
B
GLU
60
n
60
GLU
60
B
GLY
61
n
61
GLY
61
B
ILE
62
n
62
ILE
62
B
PRO
63
n
63
PRO
63
B
HIS
64
n
64
HIS
64
B
TYR
65
n
65
TYR
65
B
MSE
66
n
66
MSE
66
B
ILE
67
n
67
ILE
67
B
ASP
68
n
68
ASP
68
B
ILE
69
n
69
ILE
69
B
LEU
70
n
70
LEU
70
B
PRO
71
n
71
PRO
71
B
PRO
72
n
72
PRO
72
B
ASP
73
n
73
ASP
73
B
ALA
74
n
74
ALA
74
B
SER
75
n
75
SER
75
B
PHE
76
n
76
PHE
76
B
SER
77
n
77
SER
77
B
ALA
78
n
78
ALA
78
B
TYR
79
n
79
TYR
79
B
GLU
80
n
80
GLU
80
B
PHE
81
n
81
PHE
81
B
LYS
82
n
82
LYS
82
B
LYS
83
n
83
LYS
83
B
ARG
84
n
84
ARG
84
B
ALA
85
n
85
ALA
85
B
GLU
86
n
86
GLU
86
B
LYS
87
n
87
LYS
87
B
TYR
88
n
88
TYR
88
B
ILE
89
n
89
ILE
89
B
LYS
90
n
90
LYS
90
B
ASP
91
n
91
ASP
91
B
ILE
92
n
92
ILE
92
B
THR
93
n
93
THR
93
B
ARG
94
n
94
ARG
94
B
ARG
95
n
95
ARG
95
B
GLY
96
n
96
GLY
96
B
LYS
97
n
97
LYS
97
B
VAL
98
n
98
VAL
98
B
PRO
99
n
99
PRO
99
B
ILE
100
n
100
ILE
100
B
ILE
101
n
101
ILE
101
B
ALA
102
n
102
ALA
102
B
GLY
103
n
103
GLY
103
B
GLY
104
n
104
GLY
104
B
THR
105
n
105
THR
105
B
GLY
106
n
106
GLY
106
B
LEU
107
n
107
LEU
107
B
TYR
108
n
108
TYR
108
B
ILE
109
n
109
ILE
109
B
GLN
110
n
110
GLN
110
B
SER
111
n
111
SER
111
B
LEU
112
n
112
LEU
112
B
LEU
113
n
113
LEU
113
B
TYR
114
n
114
TYR
114
B
ASN
115
n
115
ASN
115
B
TYR
116
n
116
TYR
116
B
ALA
117
n
117
ALA
117
B
PHE
118
n
118
PHE
118
B
GLU
119
n
119
GLU
119
B
n
120
120
B
n
121
121
B
n
122
122
B
n
123
123
B
n
124
124
B
n
125
125
B
ASP
126
n
126
ASP
126
B
LYS
127
n
127
LYS
127
B
MSE
128
n
128
MSE
128
B
LYS
129
n
129
LYS
129
B
GLN
130
n
130
GLN
130
B
VAL
131
n
131
VAL
131
B
LYS
132
n
132
LYS
132
B
LEU
133
n
133
LEU
133
B
LYS
134
n
134
LYS
134
B
LEU
135
n
135
LEU
135
B
LYS
136
n
136
LYS
136
B
GLU
137
n
137
GLU
137
B
LEU
138
n
138
LEU
138
B
GLU
139
n
139
GLU
139
B
HIS
140
n
140
HIS
140
B
LEU
141
n
141
LEU
141
B
ASN
142
n
142
ASN
142
B
ASN
143
n
143
ASN
143
B
ASN
144
n
144
ASN
144
B
LYS
145
n
145
LYS
145
B
LEU
146
n
146
LEU
146
B
HIS
147
n
147
HIS
147
B
GLU
148
n
148
GLU
148
B
TYR
149
n
149
TYR
149
B
LEU
150
n
150
LEU
150
B
ALA
151
n
151
ALA
151
B
SER
152
n
152
SER
152
B
PHE
153
n
153
PHE
153
B
ASP
154
n
154
ASP
154
B
LYS
155
n
155
LYS
155
B
GLU
156
n
156
GLU
156
B
SER
157
n
157
SER
157
B
ALA
158
n
158
ALA
158
B
LYS
159
n
159
LYS
159
B
ASP
160
n
160
ASP
160
B
ILE
161
n
161
ILE
161
B
HIS
162
n
162
HIS
162
B
PRO
163
n
163
PRO
163
B
ASN
164
n
164
ASN
164
B
ASN
165
n
165
ASN
165
B
ARG
166
n
166
ARG
166
B
LYS
167
n
167
LYS
167
B
ARG
168
n
168
ARG
168
B
VAL
169
n
169
VAL
169
B
LEU
170
n
170
LEU
170
B
ARG
171
n
171
ARG
171
B
ALA
172
n
172
ALA
172
B
ILE
173
n
173
ILE
173
B
GLU
174
n
174
GLU
174
B
TYR
175
n
175
TYR
175
B
TYR
176
n
176
TYR
176
B
LEU
177
n
177
LEU
177
B
LYS
178
n
178
LYS
178
B
THR
179
n
179
THR
179
B
LYS
180
n
180
LYS
180
B
LYS
181
n
181
LYS
181
B
LEU
182
n
182
LEU
182
B
LEU
183
n
183
LEU
183
B
SER
184
n
184
SER
184
B
SER
185
n
185
SER
185
B
ARG
186
n
186
ARG
186
B
LYS
187
n
187
LYS
187
B
LYS
188
n
188
LYS
188
B
VAL
189
n
189
VAL
189
B
GLN
190
n
190
GLN
190
B
GLN
191
n
191
GLN
191
B
PHE
192
n
192
PHE
192
B
THR
193
n
193
THR
193
B
GLU
194
n
194
GLU
194
B
ASN
195
n
195
ASN
195
B
TYR
196
n
196
TYR
196
B
ASP
197
n
197
ASP
197
B
THR
198
n
198
THR
198
B
LEU
199
n
199
LEU
199
B
LEU
200
n
200
LEU
200
B
ILE
201
n
201
ILE
201
B
GLY
202
n
202
GLY
202
B
ILE
203
n
203
ILE
203
B
GLU
204
n
204
GLU
204
B
MSE
205
n
205
MSE
205
B
SER
206
n
206
SER
206
B
ARG
207
n
207
ARG
207
B
GLU
208
n
208
GLU
208
B
THR
209
n
209
THR
209
B
LEU
210
n
210
LEU
210
B
TYR
211
n
211
TYR
211
B
LEU
212
n
212
LEU
212
B
ARG
213
n
213
ARG
213
B
ILE
214
n
214
ILE
214
B
ASN
215
n
215
ASN
215
B
LYS
216
n
216
LYS
216
B
ARG
217
n
217
ARG
217
B
VAL
218
n
218
VAL
218
B
ASP
219
n
219
ASP
219
B
ILE
220
n
220
ILE
220
B
MSE
221
n
221
MSE
221
B
LEU
222
n
222
LEU
222
B
GLY
223
n
223
GLY
223
B
HIS
224
n
224
HIS
224
B
GLY
225
n
225
GLY
225
B
LEU
226
n
226
LEU
226
B
PHE
227
n
227
PHE
227
B
ASN
228
n
228
ASN
228
B
GLU
229
n
229
GLU
229
B
VAL
230
n
230
VAL
230
B
GLN
231
n
231
GLN
231
B
HIS
232
n
232
HIS
232
B
LEU
233
n
233
LEU
233
B
VAL
234
n
234
VAL
234
B
GLU
235
n
235
GLU
235
B
GLN
236
n
236
GLN
236
B
GLY
237
n
237
GLY
237
B
PHE
238
n
238
PHE
238
B
GLU
239
n
239
GLU
239
B
ALA
240
n
240
ALA
240
B
SER
241
n
241
SER
241
B
GLN
242
n
242
GLN
242
B
SER
243
n
243
SER
243
B
MSE
244
n
244
MSE
244
B
GLN
245
n
245
GLN
245
B
ALA
246
n
246
ALA
246
B
ILE
247
n
247
ILE
247
B
GLY
248
n
248
GLY
248
B
TYR
249
n
249
TYR
249
B
LYS
250
n
250
LYS
250
B
GLU
251
n
251
GLU
251
B
LEU
252
n
252
LEU
252
B
VAL
253
n
253
VAL
253
B
PRO
254
n
254
PRO
254
B
VAL
255
n
255
VAL
255
B
ILE
256
n
256
ILE
256
B
LYS
257
n
257
LYS
257
B
GLY
258
n
258
GLY
258
B
ASN
259
n
259
ASN
259
B
ILE
260
n
260
ILE
260
B
SER
261
n
261
SER
261
B
MSE
262
n
262
MSE
262
B
GLU
263
n
263
GLU
263
B
ASN
264
n
264
ASN
264
B
ALA
265
n
265
ALA
265
B
VAL
266
n
266
VAL
266
B
GLU
267
n
267
GLU
267
B
LYS
268
n
268
LYS
268
B
LEU
269
n
269
LEU
269
B
LYS
270
n
270
LYS
270
B
GLN
271
n
271
GLN
271
B
HIS
272
n
272
HIS
272
B
SER
273
n
273
SER
273
B
ARG
274
n
274
ARG
274
B
GLN
275
n
275
GLN
275
B
TYR
276
n
276
TYR
276
B
ALA
277
n
277
ALA
277
B
LYS
278
n
278
LYS
278
B
ARG
279
n
279
ARG
279
B
GLN
280
n
280
GLN
280
B
LEU
281
n
281
LEU
281
B
THR
282
n
282
THR
282
B
TRP
283
n
283
TRP
283
B
PHE
284
n
284
PHE
284
B
LYS
285
n
285
LYS
285
B
ASN
286
n
286
ASN
286
B
LYS
287
n
287
LYS
287
B
MSE
288
n
288
MSE
288
B
ASN
289
n
289
ASN
289
B
VAL
290
n
290
VAL
290
B
HIS
291
n
291
HIS
291
B
TRP
292
n
292
TRP
292
B
LEU
293
n
293
LEU
293
B
ASN
294
n
294
ASN
294
B
LYS
295
n
295
LYS
295
B
GLU
296
n
296
GLU
296
B
ARG
297
n
297
ARG
297
B
MSE
298
n
298
MSE
298
B
SER
299
n
299
SER
299
B
LEU
300
n
300
LEU
300
B
GLN
301
n
301
GLN
301
B
MSE
302
n
302
MSE
302
B
MSE
303
n
303
MSE
303
B
LEU
304
n
304
LEU
304
B
ASP
305
n
305
ASP
305
B
GLU
306
n
306
GLU
306
B
ILE
307
n
307
ILE
307
B
THR
308
n
308
THR
308
B
THR
309
n
309
THR
309
B
GLN
310
n
310
GLN
310
B
ILE
311
n
311
ILE
311
B
ASN
312
n
312
ASN
312
B
LYS
313
n
313
LYS
313
B
ARG
314
n
314
ARG
314
B
n
315
315
B
n
316
316
B
n
317
317
B
n
318
318
B
n
319
319
B
n
320
320
B
n
321
321
B
n
322
322
B
n
323
323
B
n
324
324
B
n
325
325
B
n
326
326
B
n
327
327
B
n
328
328
B
n
329
329
B
n
330
330
B
n
331
331
B
n
332
332
B
n
333
333
B
n
334
334
B
n
335
335
B
n
336
336
B
n
337
337
B
n
338
338
B
n
339
339
B
n
340
340
B
author_and_software_defined_assembly
PISA
1
monomeric
author_and_software_defined_assembly
PISA
1
monomeric
A
MSE
41
SELENOMETHIONINE
A
MSE
41
MET
A
MSE
47
SELENOMETHIONINE
A
MSE
47
MET
A
MSE
59
SELENOMETHIONINE
A
MSE
59
MET
A
MSE
66
SELENOMETHIONINE
A
MSE
66
MET
A
MSE
128
SELENOMETHIONINE
A
MSE
128
MET
A
MSE
205
SELENOMETHIONINE
A
MSE
205
MET
A
MSE
221
SELENOMETHIONINE
A
MSE
221
MET
A
MSE
244
SELENOMETHIONINE
A
MSE
244
MET
A
MSE
262
SELENOMETHIONINE
A
MSE
262
MET
A
MSE
288
SELENOMETHIONINE
A
MSE
288
MET
A
MSE
298
SELENOMETHIONINE
A
MSE
298
MET
A
MSE
302
SELENOMETHIONINE
A
MSE
302
MET
A
MSE
303
SELENOMETHIONINE
A
MSE
303
MET
B
MSE
41
SELENOMETHIONINE
B
MSE
41
MET
B
MSE
47
SELENOMETHIONINE
B
MSE
47
MET
B
MSE
59
SELENOMETHIONINE
B
MSE
59
MET
B
MSE
66
SELENOMETHIONINE
B
MSE
66
MET
B
MSE
128
SELENOMETHIONINE
B
MSE
128
MET
B
MSE
205
SELENOMETHIONINE
B
MSE
205
MET
B
MSE
221
SELENOMETHIONINE
B
MSE
221
MET
B
MSE
244
SELENOMETHIONINE
B
MSE
244
MET
B
MSE
262
SELENOMETHIONINE
B
MSE
262
MET
B
MSE
288
SELENOMETHIONINE
B
MSE
288
MET
B
MSE
298
SELENOMETHIONINE
B
MSE
298
MET
B
MSE
302
SELENOMETHIONINE
B
MSE
302
MET
B
MSE
303
SELENOMETHIONINE
B
MSE
303
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
TYR
65
A
O
TYR
65
A
N
SER
37
A
N
SER
37
A
N
ILE
36
A
N
ILE
36
A
O
ILE
100
A
O
ILE
100
A
O
ILE
101
A
O
ILE
101
A
N
ILE
10
A
N
ILE
10
A
N
VAL
11
A
N
VAL
11
A
O
ILE
201
A
O
ILE
201
A
N
GLY
202
A
N
GLY
202
A
O
LEU
293
A
O
LEU
293
B
O
TYR
65
B
O
TYR
65
B
N
SER
37
B
N
SER
37
B
N
ILE
36
B
N
ILE
36
B
O
ILE
100
B
O
ILE
100
B
O
ILE
101
B
O
ILE
101
B
N
ILE
10
B
N
ILE
10
B
N
VAL
11
B
N
VAL
11
B
O
ILE
201
B
O
ILE
201
B
N
GLY
202
B
N
GLY
202
B
O
LEU
293
B
O
LEU
293
1
A
MSE
1
A
MSE
1
1
Y
1
A
THR
2
A
THR
2
1
Y
1
A
GLU
3
A
GLU
3
1
Y
1
A
MSE
4
A
MSE
4
1
Y
1
A
THR
5
A
THR
5
1
Y
1
A
ASP
120
A
ASP
120
1
Y
1
A
GLU
121
A
GLU
121
1
Y
1
A
SER
122
A
SER
122
1
Y
1
A
SER
316
A
SER
316
1
Y
1
A
ASN
317
A
ASN
317
1
Y
1
A
HIS
318
A
HIS
318
1
Y
1
A
ASP
319
A
ASP
319
1
Y
1
A
CYS
320
A
CYS
320
1
Y
1
A
LYS
321
A
LYS
321
1
Y
1
A
ARG
322
A
ARG
322
1
Y
1
A
LYS
323
A
LYS
323
1
Y
1
A
HIS
324
A
HIS
324
1
Y
1
A
PRO
325
A
PRO
325
1
Y
1
A
ARG
326
A
ARG
326
1
Y
1
A
PRO
327
A
PRO
327
1
Y
1
A
SER
328
A
SER
328
1
Y
1
A
THR
329
A
THR
329
1
Y
1
A
ARG
330
A
ARG
330
1
Y
1
A
GLU
331
A
GLU
331
1
Y
1
A
LEU
332
A
LEU
332
1
Y
1
A
LEU
333
A
LEU
333
1
Y
1
A
GLU
334
A
GLU
334
1
Y
1
A
HIS
335
A
HIS
335
1
Y
1
A
HIS
336
A
HIS
336
1
Y
1
A
HIS
337
A
HIS
337
1
Y
1
A
HIS
338
A
HIS
338
1
Y
1
A
HIS
339
A
HIS
339
1
Y
1
A
HIS
340
A
HIS
340
1
Y
1
B
MSE
1
B
MSE
1
1
Y
1
B
THR
2
B
THR
2
1
Y
1
B
GLU
3
B
GLU
3
1
Y
1
B
MSE
4
B
MSE
4
1
Y
1
B
THR
5
B
THR
5
1
Y
1
B
ASP
120
B
ASP
120
1
Y
1
B
GLU
121
B
GLU
121
1
Y
1
B
SER
122
B
SER
122
1
Y
1
B
ILE
123
B
ILE
123
1
Y
1
B
SER
124
B
SER
124
1
Y
1
B
GLU
125
B
GLU
125
1
Y
1
B
SER
315
B
SER
315
1
Y
1
B
SER
316
B
SER
316
1
Y
1
B
ASN
317
B
ASN
317
1
Y
1
B
HIS
318
B
HIS
318
1
Y
1
B
ASP
319
B
ASP
319
1
Y
1
B
CYS
320
B
CYS
320
1
Y
1
B
LYS
321
B
LYS
321
1
Y
1
B
ARG
322
B
ARG
322
1
Y
1
B
LYS
323
B
LYS
323
1
Y
1
B
HIS
324
B
HIS
324
1
Y
1
B
PRO
325
B
PRO
325
1
Y
1
B
ARG
326
B
ARG
326
1
Y
1
B
PRO
327
B
PRO
327
1
Y
1
B
SER
328
B
SER
328
1
Y
1
B
THR
329
B
THR
329
1
Y
1
B
ARG
330
B
ARG
330
1
Y
1
B
GLU
331
B
GLU
331
1
Y
1
B
LEU
332
B
LEU
332
1
Y
1
B
LEU
333
B
LEU
333
1
Y
1
B
GLU
334
B
GLU
334
1
Y
1
B
HIS
335
B
HIS
335
1
Y
1
B
HIS
336
B
HIS
336
1
Y
1
B
HIS
337
B
HIS
337
1
Y
1
B
HIS
338
B
HIS
338
1
Y
1
B
HIS
339
B
HIS
339
1
Y
1
B
HIS
340
B
HIS
340
1
Y
1
-6.08
0.50
120.30
114.22
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
207
207
207
N
1
6.30
0.50
120.30
126.60
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
207
207
207
N
1
-6.45
0.50
120.30
113.85
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
213
213
213
N
1
6.15
0.50
120.30
126.45
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
213
213
213
N
1
9.46
1.40
123.60
133.06
A
A
A
CD
NE
CZ
ARG
ARG
ARG
279
279
279
N
1
-6.61
0.50
120.30
113.69
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
279
279
279
N
1
6.49
0.50
120.30
126.79
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
279
279
279
N
1
9.12
1.40
123.60
132.72
A
A
A
CD
NE
CZ
ARG
ARG
ARG
297
297
297
N
1
6.07
0.50
120.30
126.37
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
297
297
297
N
1
-6.58
0.50
120.30
113.72
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
297
297
297
N
1
5.84
0.50
120.30
126.14
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
207
207
207
N
1
-5.97
0.50
120.30
114.33
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
207
207
207
N
1
6.46
0.50
120.30
126.76
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
213
213
213
N
1
-6.62
0.50
120.30
113.68
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
213
213
213
N
1
9.20
1.40
123.60
132.80
B
B
B
CD
NE
CZ
ARG
ARG
ARG
279
279
279
N
1
5.91
0.50
120.30
126.21
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
279
279
279
N
1
-6.38
0.50
120.30
113.92
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
279
279
279
N
1
9.81
1.40
123.60
133.41
B
B
B
CD
NE
CZ
ARG
ARG
ARG
297
297
297
N
1
-6.67
0.50
120.30
113.63
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
297
297
297
N
1
6.32
0.50
120.30
126.62
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
297
297
297
N
1
A
ASN
32
20.37
68.79
1
A
MSE
47
-105.92
79.01
1
A
ASN
115
-98.38
54.72
1
A
PHE
118
-60.52
-171.34
1
A
ASN
142
-68.92
-179.67
1
A
PHE
153
-94.97
-71.35
1
A
ASN
165
-100.44
60.51
1
A
PHE
238
-65.83
9.46
1
A
ALA
240
74.10
-4.51
1
A
MSE
244
-69.76
4.31
1
A
TYR
249
-136.06
-44.83
1
A
LYS
287
-146.10
-32.16
1
A
ARG
297
-149.10
-11.49
1
B
ASN
32
19.58
69.12
1
B
MSE
47
-105.95
78.99
1
B
ASN
142
-51.47
16.79
1
B
ASN
143
62.63
-13.34
1
B
PHE
153
-152.26
12.99
1
B
ASP
154
-163.12
64.01
1
B
ASN
165
-66.60
63.33
1
B
PHE
238
-66.44
8.14
1
B
ALA
240
73.16
-2.99
1
B
MSE
244
-68.94
4.25
1
B
TYR
249
-135.50
-44.32
1
B
LYS
287
-144.15
-32.76
1
B
ARG
297
-147.98
-12.78
47.7
25.30
0.00
1.53
-2.85
0.00
-22.45
The Friedel pairs were used in phasing. Program XtalView has also been used in refinement
0.271
0.005
0.231
0.232
0.231
2.70
19.92
2568
38620
28000
9.2
72.5
RANDOM
704715.85
0.000000
1
OVERALL
THROUGHOUT
2.0
SAD
Engh & Huber
FLAT MODEL
10.5156
0.35
0.44
0.37
5.00
0.62
0.52
2.70
19.92
44
5011
0
0
4967
0.009
1.2
21.2
0.72
0.395
0.034
0.348
2.80
136
1470
1470
10
8.5
41.8
20.2
2.70
30.0
3D3Q
38850
38850
0
0
0.094
0.076
1
11.17
2.3
89.7
0.341
2.70
2.80
1.76
3545
0.281
2.0
81.7
refinement
CNS
1.2
data collection
ADSC
Quantum
data reduction
DENZO
data scaling
SCALEPACK
phasing
SnB
phasing
RESOLVE
Y
tRNA delta(2)-isopentenylpyrophosphate transferase (E.C.2.5.1.8)
Crystal structure of tRNA delta(2)-isopentenylpyrophosphate transferase (SE0981) from Staphylococcus epidermidis. Northeast Structural Genomics Consortium target SeR100
1
N
N
1
N
N
2
N
N
2
N
N
A
GLY
19
A
GLY
19
HELX_P
A
PHE
31
A
PHE
31
1
1
13
A
SER
77
A
SER
77
HELX_P
A
ARG
95
A
ARG
95
1
2
19
A
THR
105
A
THR
105
HELX_P
A
TYR
114
A
TYR
114
1
3
10
A
SER
124
A
SER
124
HELX_P
A
GLU
137
A
GLU
137
1
4
14
A
ASN
142
A
ASN
142
HELX_P
A
ASP
154
A
ASP
154
1
5
13
A
ASP
154
A
ASP
154
HELX_P
A
ILE
161
A
ILE
161
1
6
8
A
ASN
165
A
ASN
165
HELX_P
A
LYS
180
A
LYS
180
1
7
16
A
LEU
183
A
LEU
183
HELX_P
A
THR
193
A
THR
193
1
8
11
A
SER
206
A
SER
206
HELX_P
A
HIS
224
A
HIS
224
1
9
19
A
GLY
225
A
GLY
225
HELX_P
A
GLN
236
A
GLN
236
1
10
12
A
GLN
242
A
GLN
242
HELX_P
A
ALA
246
A
ALA
246
5
11
5
A
GLU
251
A
GLU
251
HELX_P
A
GLY
258
A
GLY
258
1
12
8
A
SER
261
A
SER
261
HELX_P
A
LYS
287
A
LYS
287
1
13
27
A
SER
299
A
SER
299
HELX_P
A
SER
315
A
SER
315
1
14
17
B
GLY
19
B
GLY
19
HELX_P
B
PHE
31
B
PHE
31
1
15
13
B
SER
77
B
SER
77
HELX_P
B
ARG
95
B
ARG
95
1
16
19
B
THR
105
B
THR
105
HELX_P
B
TYR
114
B
TYR
114
1
17
10
B
LYS
127
B
LYS
127
HELX_P
B
HIS
140
B
HIS
140
1
18
14
B
ASN
144
B
ASN
144
HELX_P
B
SER
152
B
SER
152
1
19
9
B
ASP
154
B
ASP
154
HELX_P
B
ASP
160
B
ASP
160
1
20
7
B
ASN
165
B
ASN
165
HELX_P
B
LYS
180
B
LYS
180
1
21
16
B
LEU
182
B
LEU
182
HELX_P
B
GLU
194
B
GLU
194
1
22
13
B
SER
206
B
SER
206
HELX_P
B
HIS
224
B
HIS
224
1
23
19
B
GLY
225
B
GLY
225
HELX_P
B
GLN
236
B
GLN
236
1
24
12
B
GLN
242
B
GLN
242
HELX_P
B
ALA
246
B
ALA
246
5
25
5
B
GLU
251
B
GLU
251
HELX_P
B
GLY
258
B
GLY
258
1
26
8
B
SER
261
B
SER
261
HELX_P
B
LYS
287
B
LYS
287
1
27
27
B
SER
299
B
SER
299
HELX_P
B
ASN
312
B
ASN
312
1
28
14
covale
1.327
A
SER
40
A
C
SER
40
1_555
A
MSE
41
A
N
MSE
41
1_555
covale
1.330
A
MSE
41
A
C
MSE
41
1_555
A
GLN
42
A
N
GLN
42
1_555
covale
1.330
A
GLY
46
A
C
GLY
46
1_555
A
MSE
47
A
N
MSE
47
1_555
covale
1.333
A
MSE
47
A
C
MSE
47
1_555
A
ASP
48
A
N
ASP
48
1_555
covale
1.328
A
GLU
58
A
C
GLU
58
1_555
A
MSE
59
A
N
MSE
59
1_555
covale
1.333
A
MSE
59
A
C
MSE
59
1_555
A
GLU
60
A
N
GLU
60
1_555
covale
1.333
A
TYR
65
A
C
TYR
65
1_555
A
MSE
66
A
N
MSE
66
1_555
covale
1.334
A
MSE
66
A
C
MSE
66
1_555
A
ILE
67
A
N
ILE
67
1_555
covale
1.329
A
LYS
127
A
C
LYS
127
1_555
A
MSE
128
A
N
MSE
128
1_555
covale
1.331
A
MSE
128
A
C
MSE
128
1_555
A
LYS
129
A
N
LYS
129
1_555
covale
1.327
A
GLU
204
A
C
GLU
204
1_555
A
MSE
205
A
N
MSE
205
1_555
covale
1.330
A
MSE
205
A
C
MSE
205
1_555
A
SER
206
A
N
SER
206
1_555
covale
1.331
A
ILE
220
A
C
ILE
220
1_555
A
MSE
221
A
N
MSE
221
1_555
covale
1.332
A
MSE
221
A
C
MSE
221
1_555
A
LEU
222
A
N
LEU
222
1_555
covale
1.333
A
SER
243
A
C
SER
243
1_555
A
MSE
244
A
N
MSE
244
1_555
covale
1.330
A
MSE
244
A
C
MSE
244
1_555
A
GLN
245
A
N
GLN
245
1_555
covale
1.326
A
SER
261
A
C
SER
261
1_555
A
MSE
262
A
N
MSE
262
1_555
covale
1.329
A
MSE
262
A
C
MSE
262
1_555
A
GLU
263
A
N
GLU
263
1_555
covale
1.323
A
LYS
287
A
C
LYS
287
1_555
A
MSE
288
A
N
MSE
288
1_555
covale
1.316
A
MSE
288
A
C
MSE
288
1_555
A
ASN
289
A
N
ASN
289
1_555
covale
1.321
A
ARG
297
A
C
ARG
297
1_555
A
MSE
298
A
N
MSE
298
1_555
covale
1.322
A
MSE
298
A
C
MSE
298
1_555
A
SER
299
A
N
SER
299
1_555
covale
1.324
A
GLN
301
A
C
GLN
301
1_555
A
MSE
302
A
N
MSE
302
1_555
covale
1.326
A
MSE
302
A
C
MSE
302
1_555
A
MSE
303
A
N
MSE
303
1_555
covale
1.332
A
MSE
303
A
C
MSE
303
1_555
A
LEU
304
A
N
LEU
304
1_555
covale
1.329
B
SER
40
B
C
SER
40
1_555
B
MSE
41
B
N
MSE
41
1_555
covale
1.327
B
MSE
41
B
C
MSE
41
1_555
B
GLN
42
B
N
GLN
42
1_555
covale
1.326
B
GLY
46
B
C
GLY
46
1_555
B
MSE
47
B
N
MSE
47
1_555
covale
1.330
B
MSE
47
B
C
MSE
47
1_555
B
ASP
48
B
N
ASP
48
1_555
covale
1.337
B
GLU
58
B
C
GLU
58
1_555
B
MSE
59
B
N
MSE
59
1_555
covale
1.331
B
MSE
59
B
C
MSE
59
1_555
B
GLU
60
B
N
GLU
60
1_555
covale
1.328
B
TYR
65
B
C
TYR
65
1_555
B
MSE
66
B
N
MSE
66
1_555
covale
1.333
B
MSE
66
B
C
MSE
66
1_555
B
ILE
67
B
N
ILE
67
1_555
covale
1.333
B
LYS
127
B
C
LYS
127
1_555
B
MSE
128
B
N
MSE
128
1_555
covale
1.327
B
MSE
128
B
C
MSE
128
1_555
B
LYS
129
B
N
LYS
129
1_555
covale
1.327
B
GLU
204
B
C
GLU
204
1_555
B
MSE
205
B
N
MSE
205
1_555
covale
1.329
B
MSE
205
B
C
MSE
205
1_555
B
SER
206
B
N
SER
206
1_555
covale
1.334
B
ILE
220
B
C
ILE
220
1_555
B
MSE
221
B
N
MSE
221
1_555
covale
1.330
B
MSE
221
B
C
MSE
221
1_555
B
LEU
222
B
N
LEU
222
1_555
covale
1.328
B
SER
243
B
C
SER
243
1_555
B
MSE
244
B
N
MSE
244
1_555
covale
1.328
B
MSE
244
B
C
MSE
244
1_555
B
GLN
245
B
N
GLN
245
1_555
covale
1.329
B
SER
261
B
C
SER
261
1_555
B
MSE
262
B
N
MSE
262
1_555
covale
1.328
B
MSE
262
B
C
MSE
262
1_555
B
GLU
263
B
N
GLU
263
1_555
covale
1.325
B
LYS
287
B
C
LYS
287
1_555
B
MSE
288
B
N
MSE
288
1_555
covale
1.317
B
MSE
288
B
C
MSE
288
1_555
B
ASN
289
B
N
ASN
289
1_555
covale
1.330
B
ARG
297
B
C
ARG
297
1_555
B
MSE
298
B
N
MSE
298
1_555
covale
1.320
B
MSE
298
B
C
MSE
298
1_555
B
SER
299
B
N
SER
299
1_555
covale
1.326
B
GLN
301
B
C
GLN
301
1_555
B
MSE
302
B
N
MSE
302
1_555
covale
1.326
B
MSE
302
B
C
MSE
302
1_555
B
MSE
303
B
N
MSE
303
1_555
covale
1.329
B
MSE
303
B
C
MSE
303
1_555
B
LEU
304
B
N
LEU
304
1_555
TRANSFERASE
alpha-beta protein, Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, ATP-binding, Nucleotide-binding, Nucleotidyltransferase, Transferase, tRNA processing
MIAA_STAES
UNP
1
1
Q8CQL3
MTEMTKPFLIVIVGPTASGKTELSIEVAKKFNGEIISGDSMQVYQGMDIGTAKVTTEEMEGIPHYMIDILPPDASFSAYE
FKKRAEKYIKDITRRGKVPIIAGGTGLYIQSLLYNYAFEDESISEDKMKQVKLKLKELEHLNNNKLHEYLASFDKESAKD
IHPNNRKRVLRAIEYYLKTKKLLSSRKKVQQFTENYDTLLIGIEMSRETLYLRINKRVDIMLGHGLFNEVQHLVEQGFEA
SQSMQAIGYKELVPVIKGNISMENAVEKLKQHSRQYAKRQLTWFKNKMNVHWLNKERMSLQMMLDEITTQINKRSSNHDC
KRKHPRPSTREL
1
332
3D3Q
1
332
Q8CQL3
A
1
1
332
1
332
3D3Q
1
332
Q8CQL3
B
1
1
332
1
EXPRESSION TAG
LEU
333
3D3Q
A
Q8CQL3
UNP
333
1
EXPRESSION TAG
GLU
334
3D3Q
A
Q8CQL3
UNP
334
1
EXPRESSION TAG
HIS
335
3D3Q
A
Q8CQL3
UNP
335
1
EXPRESSION TAG
HIS
336
3D3Q
A
Q8CQL3
UNP
336
1
EXPRESSION TAG
HIS
337
3D3Q
A
Q8CQL3
UNP
337
1
EXPRESSION TAG
HIS
338
3D3Q
A
Q8CQL3
UNP
338
1
EXPRESSION TAG
HIS
339
3D3Q
A
Q8CQL3
UNP
339
1
EXPRESSION TAG
HIS
340
3D3Q
A
Q8CQL3
UNP
340
2
EXPRESSION TAG
LEU
333
3D3Q
B
Q8CQL3
UNP
333
2
EXPRESSION TAG
GLU
334
3D3Q
B
Q8CQL3
UNP
334
2
EXPRESSION TAG
HIS
335
3D3Q
B
Q8CQL3
UNP
335
2
EXPRESSION TAG
HIS
336
3D3Q
B
Q8CQL3
UNP
336
2
EXPRESSION TAG
HIS
337
3D3Q
B
Q8CQL3
UNP
337
2
EXPRESSION TAG
HIS
338
3D3Q
B
Q8CQL3
UNP
338
2
EXPRESSION TAG
HIS
339
3D3Q
B
Q8CQL3
UNP
339
2
EXPRESSION TAG
HIS
340
3D3Q
B
Q8CQL3
UNP
340
6
6
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
A
HIS
64
A
HIS
64
A
TYR
65
A
TYR
65
A
GLY
33
A
GLY
33
A
SER
37
A
SER
37
A
VAL
98
A
VAL
98
A
ALA
102
A
ALA
102
A
PHE
8
A
PHE
8
A
VAL
13
A
VAL
13
A
ASP
197
A
ASP
197
A
GLU
204
A
GLU
204
A
HIS
291
A
HIS
291
A
ASN
294
A
ASN
294
B
HIS
64
B
HIS
64
B
TYR
65
B
TYR
65
B
GLY
33
B
GLY
33
B
SER
37
B
SER
37
B
VAL
98
B
VAL
98
B
ALA
102
B
ALA
102
B
PHE
8
B
PHE
8
B
VAL
13
B
VAL
13
B
ASP
197
B
ASP
197
B
GLU
204
B
GLU
204
B
HIS
291
B
HIS
291
B
ASN
294
B
ASN
294
4
P 1 21 1