0.009966
0.000000
0.000000
0.000000
0.009966
0.000000
0.000000
0.000000
0.006152
0.00000
0.00000
0.00000
Morales, T.
Vigers, G.P.A.
Brandhuber, B.J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.000
90.000
90.000
100.343
100.343
162.536
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C22 H23 N5 O
373.451
(1E)-5-(1-piperidin-4-yl-3-pyridin-4-yl-1H-pyrazol-4-yl)-2,3-dihydro-1H-inden-1-one oxime
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
C
Y
305
N
N
Y
306
N
C
Y
307
N
C
Y
308
N
C
Y
309
N
C
Y
310
N
C
Y
311
N
C
Y
312
N
C
Y
313
N
N
Y
314
N
C
Y
315
N
C
N
316
N
C
Y
317
N
C
Y
318
N
C
Y
319
N
C
Y
320
N
C
N
321
N
C
N
322
N
C
Y
323
N
C
Y
324
N
N
N
325
N
N
N
326
N
C
N
327
N
C
N
328
N
C
N
329
N
C
N
330
N
N
N
331
N
O
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
N
N
356
S
C
N
357
N
C
N
358
N
O
N
359
R
C
N
360
N
O
N
361
N
C
N
362
N
O
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
Y
377
N
C
Y
378
N
C
Y
379
N
C
Y
380
N
N
Y
381
N
C
Y
382
N
C
Y
383
N
C
Y
384
N
C
Y
385
N
C
N
386
N
O
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
N
N
400
S
C
N
401
N
C
N
402
N
O
N
403
N
C
Y
404
N
C
Y
405
N
C
Y
406
N
C
Y
407
N
C
Y
408
N
C
Y
409
N
C
N
410
N
O
N
411
N
O
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
N
N
424
S
C
N
425
N
C
N
426
N
O
N
427
N
C
N
428
N
C
N
429
N
C
N
430
N
O
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
Y
292
N
sing
N
293
N
sing
Y
294
N
sing
N
295
N
sing
Y
296
N
doub
Y
297
N
doub
Y
298
N
sing
N
299
N
sing
Y
300
N
sing
N
301
N
sing
Y
302
N
doub
N
303
N
sing
Y
304
N
doub
Y
305
N
sing
Y
306
N
sing
N
307
N
sing
Y
308
N
doub
Y
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
Y
313
N
sing
N
314
N
sing
N
315
N
sing
Y
316
N
sing
Y
317
N
doub
Y
318
N
doub
Y
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
Y
326
N
sing
Y
327
N
doub
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
doub
N
340
N
sing
N
341
N
sing
N
342
E
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
doub
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
doub
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
Y
372
N
doub
Y
373
N
sing
Y
374
N
sing
N
375
N
sing
Y
376
N
doub
Y
377
N
sing
Y
378
N
sing
N
379
N
sing
Y
380
N
sing
Y
381
N
doub
N
382
N
sing
Y
383
N
doub
N
384
N
sing
Y
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
doub
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
Y
400
N
doub
Y
401
N
sing
Y
402
N
sing
N
403
N
sing
Y
404
N
doub
N
405
N
sing
Y
406
N
doub
N
407
N
sing
Y
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
doub
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
UK
Bioorg.Med.Chem.Lett.
BMCLE8
1127
0960-894X
18
4692
4695
10.1016/j.bmcl.2008.07.002
18676143
Potent and selective pyrazole-based inhibitors of B-Raf kinase.
2008
10.2210/pdb3d4q/pdb
pdb_00003d4q
100
1
SINGLE WAVELENGTH
M
x-ray
1
0.9
1.0
BL9-1
SSRL
0.9
SYNCHROTRON
SSRL BEAMLINE BL9-1
35217.633
B-Raf proto-oncogene serine/threonine-protein kinase
2.7.11.1
Residues 432-726
2
man
polymer
373.451
(1E)-5-(1-piperidin-4-yl-3-pyridin-4-yl-1H-pyrazol-4-yl)-2,3-dihydro-1H-inden-1-one oxime
2
syn
non-polymer
18.015
water
23
nat
water
p94, v-Raf murine sarcoma viral oncogene homolog B1
no
no
MDRGSHHHHHHGSEDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFK
NEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKS
NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI
NNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIHR
MDRGSHHHHHHGSEDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFK
NEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKS
NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI
NNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIHR
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
fall armyworm
sample
BRAF, BRAF1, RAFB1
9606
Homo sapiens
Hi-5
7108
Spodoptera frugiperda
Baculovirus
1
2.90
57.65
VAPOR DIFFUSION, HANGING DROP
7.8
5% PEG 3350
0.1M Tris
10% Tacsimate, pH 7.8, VAPOR DIFFUSION, HANGING DROP, temperature 285K
285
audit_author
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Structure summary
Data collection
Database references
Derived calculations
1
0
2008-08-19
1
1
2011-07-13
1
2
2018-01-24
1
3
2024-02-21
_audit_author.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2008-05-14
REL
REL
SM5
(1E)-5-(1-piperidin-4-yl-3-pyridin-4-yl-1H-pyrazol-4-yl)-2,3-dihydro-1H-inden-1-one oxime
HOH
water
SM5
1
2
SM5
SM5
1
A
SM5
1
2
SM5
SM5
1
B
TIP
3
3
HOH
HOH
3
A
TIP
5
3
HOH
HOH
5
A
TIP
6
3
HOH
HOH
6
A
TIP
9
3
HOH
HOH
9
A
TIP
10
3
HOH
HOH
10
A
TIP
14
3
HOH
HOH
14
A
TIP
17
3
HOH
HOH
17
A
TIP
19
3
HOH
HOH
19
A
TIP
23
3
HOH
HOH
23
A
TIP
1
3
HOH
HOH
727
B
TIP
2
3
HOH
HOH
728
B
TIP
4
3
HOH
HOH
729
B
TIP
7
3
HOH
HOH
730
B
TIP
8
3
HOH
HOH
731
B
TIP
11
3
HOH
HOH
732
B
TIP
12
3
HOH
HOH
733
B
TIP
13
3
HOH
HOH
734
B
TIP
15
3
HOH
HOH
735
B
TIP
16
3
HOH
HOH
736
B
TIP
18
3
HOH
HOH
737
B
TIP
20
3
HOH
HOH
738
B
TIP
21
3
HOH
HOH
739
B
TIP
22
3
HOH
HOH
740
B
n
1
420
A
n
2
421
A
n
3
422
A
n
4
423
A
n
5
424
A
n
6
425
A
n
7
426
A
n
8
427
A
n
9
428
A
n
10
429
A
n
11
430
A
n
12
431
A
n
13
432
A
n
14
433
A
n
15
434
A
n
16
435
A
n
17
436
A
n
18
437
A
n
19
438
A
n
20
439
A
n
21
440
A
n
22
441
A
n
23
442
A
n
24
443
A
n
25
444
A
n
26
445
A
n
27
446
A
n
28
447
A
ASP
448
n
29
ASP
448
A
ASP
449
n
30
ASP
449
A
TRP
450
n
31
TRP
450
A
GLU
451
n
32
GLU
451
A
ILE
452
n
33
ILE
452
A
PRO
453
n
34
PRO
453
A
ASP
454
n
35
ASP
454
A
GLY
455
n
36
GLY
455
A
GLN
456
n
37
GLN
456
A
ILE
457
n
38
ILE
457
A
THR
458
n
39
THR
458
A
VAL
459
n
40
VAL
459
A
GLY
460
n
41
GLY
460
A
GLN
461
n
42
GLN
461
A
ARG
462
n
43
ARG
462
A
ILE
463
n
44
ILE
463
A
GLY
464
n
45
GLY
464
A
SER
465
n
46
SER
465
A
GLY
466
n
47
GLY
466
A
SER
467
n
48
SER
467
A
PHE
468
n
49
PHE
468
A
GLY
469
n
50
GLY
469
A
THR
470
n
51
THR
470
A
VAL
471
n
52
VAL
471
A
TYR
472
n
53
TYR
472
A
LYS
473
n
54
LYS
473
A
GLY
474
n
55
GLY
474
A
LYS
475
n
56
LYS
475
A
TRP
476
n
57
TRP
476
A
HIS
477
n
58
HIS
477
A
GLY
478
n
59
GLY
478
A
ASP
479
n
60
ASP
479
A
VAL
480
n
61
VAL
480
A
ALA
481
n
62
ALA
481
A
VAL
482
n
63
VAL
482
A
LYS
483
n
64
LYS
483
A
MET
484
n
65
MET
484
A
LEU
485
n
66
LEU
485
A
ASN
486
n
67
ASN
486
A
VAL
487
n
68
VAL
487
A
THR
488
n
69
THR
488
A
ALA
489
n
70
ALA
489
A
PRO
490
n
71
PRO
490
A
THR
491
n
72
THR
491
A
PRO
492
n
73
PRO
492
A
GLN
493
n
74
GLN
493
A
GLN
494
n
75
GLN
494
A
LEU
495
n
76
LEU
495
A
GLN
496
n
77
GLN
496
A
ALA
497
n
78
ALA
497
A
PHE
498
n
79
PHE
498
A
LYS
499
n
80
LYS
499
A
ASN
500
n
81
ASN
500
A
GLU
501
n
82
GLU
501
A
VAL
502
n
83
VAL
502
A
GLY
503
n
84
GLY
503
A
VAL
504
n
85
VAL
504
A
LEU
505
n
86
LEU
505
A
ARG
506
n
87
ARG
506
A
LYS
507
n
88
LYS
507
A
THR
508
n
89
THR
508
A
ARG
509
n
90
ARG
509
A
HIS
510
n
91
HIS
510
A
VAL
511
n
92
VAL
511
A
ASN
512
n
93
ASN
512
A
ILE
513
n
94
ILE
513
A
LEU
514
n
95
LEU
514
A
LEU
515
n
96
LEU
515
A
PHE
516
n
97
PHE
516
A
MET
517
n
98
MET
517
A
GLY
518
n
99
GLY
518
A
TYR
519
n
100
TYR
519
A
SER
520
n
101
SER
520
A
THR
521
n
102
THR
521
A
LYS
522
n
103
LYS
522
A
PRO
523
n
104
PRO
523
A
GLN
524
n
105
GLN
524
A
LEU
525
n
106
LEU
525
A
ALA
526
n
107
ALA
526
A
ILE
527
n
108
ILE
527
A
VAL
528
n
109
VAL
528
A
THR
529
n
110
THR
529
A
GLN
530
n
111
GLN
530
A
TRP
531
n
112
TRP
531
A
CYS
532
n
113
CYS
532
A
GLU
533
n
114
GLU
533
A
GLY
534
n
115
GLY
534
A
SER
535
n
116
SER
535
A
SER
536
n
117
SER
536
A
LEU
537
n
118
LEU
537
A
TYR
538
n
119
TYR
538
A
HIS
539
n
120
HIS
539
A
HIS
540
n
121
HIS
540
A
LEU
541
n
122
LEU
541
A
HIS
542
n
123
HIS
542
A
ILE
543
n
124
ILE
543
A
ILE
544
n
125
ILE
544
A
GLU
545
n
126
GLU
545
A
THR
546
n
127
THR
546
A
LYS
547
n
128
LYS
547
A
PHE
548
n
129
PHE
548
A
GLU
549
n
130
GLU
549
A
MET
550
n
131
MET
550
A
ILE
551
n
132
ILE
551
A
LYS
552
n
133
LYS
552
A
LEU
553
n
134
LEU
553
A
ILE
554
n
135
ILE
554
A
ASP
555
n
136
ASP
555
A
ILE
556
n
137
ILE
556
A
ALA
557
n
138
ALA
557
A
ARG
558
n
139
ARG
558
A
GLN
559
n
140
GLN
559
A
THR
560
n
141
THR
560
A
ALA
561
n
142
ALA
561
A
GLN
562
n
143
GLN
562
A
GLY
563
n
144
GLY
563
A
MET
564
n
145
MET
564
A
ASP
565
n
146
ASP
565
A
TYR
566
n
147
TYR
566
A
LEU
567
n
148
LEU
567
A
HIS
568
n
149
HIS
568
A
ALA
569
n
150
ALA
569
A
LYS
570
n
151
LYS
570
A
SER
571
n
152
SER
571
A
ILE
572
n
153
ILE
572
A
ILE
573
n
154
ILE
573
A
HIS
574
n
155
HIS
574
A
ARG
575
n
156
ARG
575
A
ASP
576
n
157
ASP
576
A
LEU
577
n
158
LEU
577
A
LYS
578
n
159
LYS
578
A
SER
579
n
160
SER
579
A
ASN
580
n
161
ASN
580
A
ASN
581
n
162
ASN
581
A
ILE
582
n
163
ILE
582
A
PHE
583
n
164
PHE
583
A
LEU
584
n
165
LEU
584
A
HIS
585
n
166
HIS
585
A
GLU
586
n
167
GLU
586
A
ASP
587
n
168
ASP
587
A
LEU
588
n
169
LEU
588
A
THR
589
n
170
THR
589
A
VAL
590
n
171
VAL
590
A
LYS
591
n
172
LYS
591
A
ILE
592
n
173
ILE
592
A
GLY
593
n
174
GLY
593
A
ASP
594
n
175
ASP
594
A
PHE
595
n
176
PHE
595
A
GLY
596
n
177
GLY
596
A
LEU
597
n
178
LEU
597
A
ALA
598
n
179
ALA
598
A
THR
599
n
180
THR
599
A
VAL
600
n
181
VAL
600
A
n
182
601
A
n
183
602
A
n
184
603
A
n
185
604
A
n
186
605
A
n
187
606
A
n
188
607
A
n
189
608
A
n
190
609
A
n
191
610
A
n
192
611
A
n
193
612
A
LEU
613
n
194
LEU
613
A
SER
614
n
195
SER
614
A
GLY
615
n
196
GLY
615
A
SER
616
n
197
SER
616
A
ILE
617
n
198
ILE
617
A
LEU
618
n
199
LEU
618
A
TRP
619
n
200
TRP
619
A
MET
620
n
201
MET
620
A
ALA
621
n
202
ALA
621
A
PRO
622
n
203
PRO
622
A
GLU
623
n
204
GLU
623
A
VAL
624
n
205
VAL
624
A
ILE
625
n
206
ILE
625
A
ARG
626
n
207
ARG
626
A
MET
627
n
208
MET
627
A
GLN
628
n
209
GLN
628
A
ASP
629
n
210
ASP
629
A
LYS
630
n
211
LYS
630
A
ASN
631
n
212
ASN
631
A
PRO
632
n
213
PRO
632
A
TYR
633
n
214
TYR
633
A
SER
634
n
215
SER
634
A
PHE
635
n
216
PHE
635
A
GLN
636
n
217
GLN
636
A
SER
637
n
218
SER
637
A
ASP
638
n
219
ASP
638
A
VAL
639
n
220
VAL
639
A
TYR
640
n
221
TYR
640
A
ALA
641
n
222
ALA
641
A
PHE
642
n
223
PHE
642
A
GLY
643
n
224
GLY
643
A
ILE
644
n
225
ILE
644
A
VAL
645
n
226
VAL
645
A
LEU
646
n
227
LEU
646
A
TYR
647
n
228
TYR
647
A
GLU
648
n
229
GLU
648
A
LEU
649
n
230
LEU
649
A
MET
650
n
231
MET
650
A
THR
651
n
232
THR
651
A
GLY
652
n
233
GLY
652
A
GLN
653
n
234
GLN
653
A
LEU
654
n
235
LEU
654
A
PRO
655
n
236
PRO
655
A
TYR
656
n
237
TYR
656
A
SER
657
n
238
SER
657
A
ASN
658
n
239
ASN
658
A
ILE
659
n
240
ILE
659
A
ASN
660
n
241
ASN
660
A
ASN
661
n
242
ASN
661
A
ARG
662
n
243
ARG
662
A
ASP
663
n
244
ASP
663
A
GLN
664
n
245
GLN
664
A
ILE
665
n
246
ILE
665
A
ILE
666
n
247
ILE
666
A
PHE
667
n
248
PHE
667
A
MET
668
n
249
MET
668
A
VAL
669
n
250
VAL
669
A
GLY
670
n
251
GLY
670
A
ARG
671
n
252
ARG
671
A
GLY
672
n
253
GLY
672
A
TYR
673
n
254
TYR
673
A
LEU
674
n
255
LEU
674
A
SER
675
n
256
SER
675
A
PRO
676
n
257
PRO
676
A
ASP
677
n
258
ASP
677
A
LEU
678
n
259
LEU
678
A
SER
679
n
260
SER
679
A
LYS
680
n
261
LYS
680
A
VAL
681
n
262
VAL
681
A
ARG
682
n
263
ARG
682
A
SER
683
n
264
SER
683
A
ASN
684
n
265
ASN
684
A
CYS
685
n
266
CYS
685
A
PRO
686
n
267
PRO
686
A
LYS
687
n
268
LYS
687
A
ALA
688
n
269
ALA
688
A
MET
689
n
270
MET
689
A
LYS
690
n
271
LYS
690
A
ARG
691
n
272
ARG
691
A
LEU
692
n
273
LEU
692
A
MET
693
n
274
MET
693
A
ALA
694
n
275
ALA
694
A
GLU
695
n
276
GLU
695
A
CYS
696
n
277
CYS
696
A
LEU
697
n
278
LEU
697
A
LYS
698
n
279
LYS
698
A
LYS
699
n
280
LYS
699
A
LYS
700
n
281
LYS
700
A
ARG
701
n
282
ARG
701
A
ASP
702
n
283
ASP
702
A
GLU
703
n
284
GLU
703
A
ARG
704
n
285
ARG
704
A
PRO
705
n
286
PRO
705
A
LEU
706
n
287
LEU
706
A
PHE
707
n
288
PHE
707
A
PRO
708
n
289
PRO
708
A
GLN
709
n
290
GLN
709
A
ILE
710
n
291
ILE
710
A
LEU
711
n
292
LEU
711
A
ALA
712
n
293
ALA
712
A
SER
713
n
294
SER
713
A
ILE
714
n
295
ILE
714
A
GLU
715
n
296
GLU
715
A
LEU
716
n
297
LEU
716
A
LEU
717
n
298
LEU
717
A
ALA
718
n
299
ALA
718
A
ARG
719
n
300
ARG
719
A
SER
720
n
301
SER
720
A
LEU
721
n
302
LEU
721
A
PRO
722
n
303
PRO
722
A
LYS
723
n
304
LYS
723
A
n
305
724
A
n
306
725
A
n
307
726
A
n
1
420
B
n
2
421
B
n
3
422
B
n
4
423
B
n
5
424
B
n
6
425
B
n
7
426
B
n
8
427
B
n
9
428
B
n
10
429
B
n
11
430
B
n
12
431
B
n
13
432
B
n
14
433
B
n
15
434
B
n
16
435
B
n
17
436
B
n
18
437
B
n
19
438
B
n
20
439
B
n
21
440
B
n
22
441
B
n
23
442
B
n
24
443
B
n
25
444
B
n
26
445
B
n
27
446
B
n
28
447
B
ASP
448
n
29
ASP
448
B
ASP
449
n
30
ASP
449
B
TRP
450
n
31
TRP
450
B
GLU
451
n
32
GLU
451
B
ILE
452
n
33
ILE
452
B
PRO
453
n
34
PRO
453
B
ASP
454
n
35
ASP
454
B
GLY
455
n
36
GLY
455
B
GLN
456
n
37
GLN
456
B
ILE
457
n
38
ILE
457
B
THR
458
n
39
THR
458
B
VAL
459
n
40
VAL
459
B
GLY
460
n
41
GLY
460
B
GLN
461
n
42
GLN
461
B
ARG
462
n
43
ARG
462
B
ILE
463
n
44
ILE
463
B
GLY
464
n
45
GLY
464
B
SER
465
n
46
SER
465
B
GLY
466
n
47
GLY
466
B
SER
467
n
48
SER
467
B
PHE
468
n
49
PHE
468
B
GLY
469
n
50
GLY
469
B
THR
470
n
51
THR
470
B
VAL
471
n
52
VAL
471
B
TYR
472
n
53
TYR
472
B
LYS
473
n
54
LYS
473
B
GLY
474
n
55
GLY
474
B
LYS
475
n
56
LYS
475
B
TRP
476
n
57
TRP
476
B
HIS
477
n
58
HIS
477
B
GLY
478
n
59
GLY
478
B
ASP
479
n
60
ASP
479
B
VAL
480
n
61
VAL
480
B
ALA
481
n
62
ALA
481
B
VAL
482
n
63
VAL
482
B
LYS
483
n
64
LYS
483
B
MET
484
n
65
MET
484
B
LEU
485
n
66
LEU
485
B
ASN
486
n
67
ASN
486
B
VAL
487
n
68
VAL
487
B
THR
488
n
69
THR
488
B
ALA
489
n
70
ALA
489
B
PRO
490
n
71
PRO
490
B
THR
491
n
72
THR
491
B
PRO
492
n
73
PRO
492
B
GLN
493
n
74
GLN
493
B
GLN
494
n
75
GLN
494
B
LEU
495
n
76
LEU
495
B
GLN
496
n
77
GLN
496
B
ALA
497
n
78
ALA
497
B
PHE
498
n
79
PHE
498
B
LYS
499
n
80
LYS
499
B
ASN
500
n
81
ASN
500
B
GLU
501
n
82
GLU
501
B
VAL
502
n
83
VAL
502
B
GLY
503
n
84
GLY
503
B
VAL
504
n
85
VAL
504
B
LEU
505
n
86
LEU
505
B
ARG
506
n
87
ARG
506
B
LYS
507
n
88
LYS
507
B
THR
508
n
89
THR
508
B
ARG
509
n
90
ARG
509
B
HIS
510
n
91
HIS
510
B
VAL
511
n
92
VAL
511
B
ASN
512
n
93
ASN
512
B
ILE
513
n
94
ILE
513
B
LEU
514
n
95
LEU
514
B
LEU
515
n
96
LEU
515
B
PHE
516
n
97
PHE
516
B
MET
517
n
98
MET
517
B
GLY
518
n
99
GLY
518
B
TYR
519
n
100
TYR
519
B
SER
520
n
101
SER
520
B
THR
521
n
102
THR
521
B
LYS
522
n
103
LYS
522
B
PRO
523
n
104
PRO
523
B
GLN
524
n
105
GLN
524
B
LEU
525
n
106
LEU
525
B
ALA
526
n
107
ALA
526
B
ILE
527
n
108
ILE
527
B
VAL
528
n
109
VAL
528
B
THR
529
n
110
THR
529
B
GLN
530
n
111
GLN
530
B
TRP
531
n
112
TRP
531
B
CYS
532
n
113
CYS
532
B
GLU
533
n
114
GLU
533
B
GLY
534
n
115
GLY
534
B
SER
535
n
116
SER
535
B
SER
536
n
117
SER
536
B
LEU
537
n
118
LEU
537
B
TYR
538
n
119
TYR
538
B
HIS
539
n
120
HIS
539
B
HIS
540
n
121
HIS
540
B
LEU
541
n
122
LEU
541
B
HIS
542
n
123
HIS
542
B
ILE
543
n
124
ILE
543
B
ILE
544
n
125
ILE
544
B
GLU
545
n
126
GLU
545
B
THR
546
n
127
THR
546
B
LYS
547
n
128
LYS
547
B
PHE
548
n
129
PHE
548
B
GLU
549
n
130
GLU
549
B
MET
550
n
131
MET
550
B
ILE
551
n
132
ILE
551
B
LYS
552
n
133
LYS
552
B
LEU
553
n
134
LEU
553
B
ILE
554
n
135
ILE
554
B
ASP
555
n
136
ASP
555
B
ILE
556
n
137
ILE
556
B
ALA
557
n
138
ALA
557
B
ARG
558
n
139
ARG
558
B
GLN
559
n
140
GLN
559
B
THR
560
n
141
THR
560
B
ALA
561
n
142
ALA
561
B
GLN
562
n
143
GLN
562
B
GLY
563
n
144
GLY
563
B
MET
564
n
145
MET
564
B
ASP
565
n
146
ASP
565
B
TYR
566
n
147
TYR
566
B
LEU
567
n
148
LEU
567
B
HIS
568
n
149
HIS
568
B
ALA
569
n
150
ALA
569
B
LYS
570
n
151
LYS
570
B
SER
571
n
152
SER
571
B
ILE
572
n
153
ILE
572
B
ILE
573
n
154
ILE
573
B
HIS
574
n
155
HIS
574
B
ARG
575
n
156
ARG
575
B
ASP
576
n
157
ASP
576
B
LEU
577
n
158
LEU
577
B
LYS
578
n
159
LYS
578
B
SER
579
n
160
SER
579
B
ASN
580
n
161
ASN
580
B
ASN
581
n
162
ASN
581
B
ILE
582
n
163
ILE
582
B
PHE
583
n
164
PHE
583
B
LEU
584
n
165
LEU
584
B
HIS
585
n
166
HIS
585
B
GLU
586
n
167
GLU
586
B
ASP
587
n
168
ASP
587
B
LEU
588
n
169
LEU
588
B
THR
589
n
170
THR
589
B
VAL
590
n
171
VAL
590
B
LYS
591
n
172
LYS
591
B
ILE
592
n
173
ILE
592
B
GLY
593
n
174
GLY
593
B
ASP
594
n
175
ASP
594
B
PHE
595
n
176
PHE
595
B
GLY
596
n
177
GLY
596
B
LEU
597
n
178
LEU
597
B
ALA
598
n
179
ALA
598
B
THR
599
n
180
THR
599
B
VAL
600
n
181
VAL
600
B
n
182
601
B
n
183
602
B
n
184
603
B
n
185
604
B
n
186
605
B
n
187
606
B
n
188
607
B
n
189
608
B
n
190
609
B
n
191
610
B
n
192
611
B
n
193
612
B
LEU
613
n
194
LEU
613
B
SER
614
n
195
SER
614
B
GLY
615
n
196
GLY
615
B
SER
616
n
197
SER
616
B
ILE
617
n
198
ILE
617
B
LEU
618
n
199
LEU
618
B
TRP
619
n
200
TRP
619
B
MET
620
n
201
MET
620
B
ALA
621
n
202
ALA
621
B
PRO
622
n
203
PRO
622
B
GLU
623
n
204
GLU
623
B
VAL
624
n
205
VAL
624
B
ILE
625
n
206
ILE
625
B
ARG
626
n
207
ARG
626
B
MET
627
n
208
MET
627
B
GLN
628
n
209
GLN
628
B
ASP
629
n
210
ASP
629
B
LYS
630
n
211
LYS
630
B
ASN
631
n
212
ASN
631
B
PRO
632
n
213
PRO
632
B
TYR
633
n
214
TYR
633
B
SER
634
n
215
SER
634
B
PHE
635
n
216
PHE
635
B
GLN
636
n
217
GLN
636
B
SER
637
n
218
SER
637
B
ASP
638
n
219
ASP
638
B
VAL
639
n
220
VAL
639
B
TYR
640
n
221
TYR
640
B
ALA
641
n
222
ALA
641
B
PHE
642
n
223
PHE
642
B
GLY
643
n
224
GLY
643
B
ILE
644
n
225
ILE
644
B
VAL
645
n
226
VAL
645
B
LEU
646
n
227
LEU
646
B
TYR
647
n
228
TYR
647
B
GLU
648
n
229
GLU
648
B
LEU
649
n
230
LEU
649
B
MET
650
n
231
MET
650
B
THR
651
n
232
THR
651
B
GLY
652
n
233
GLY
652
B
GLN
653
n
234
GLN
653
B
LEU
654
n
235
LEU
654
B
PRO
655
n
236
PRO
655
B
TYR
656
n
237
TYR
656
B
SER
657
n
238
SER
657
B
ASN
658
n
239
ASN
658
B
ILE
659
n
240
ILE
659
B
ASN
660
n
241
ASN
660
B
ASN
661
n
242
ASN
661
B
ARG
662
n
243
ARG
662
B
ASP
663
n
244
ASP
663
B
GLN
664
n
245
GLN
664
B
ILE
665
n
246
ILE
665
B
ILE
666
n
247
ILE
666
B
PHE
667
n
248
PHE
667
B
MET
668
n
249
MET
668
B
VAL
669
n
250
VAL
669
B
GLY
670
n
251
GLY
670
B
ARG
671
n
252
ARG
671
B
GLY
672
n
253
GLY
672
B
TYR
673
n
254
TYR
673
B
LEU
674
n
255
LEU
674
B
SER
675
n
256
SER
675
B
PRO
676
n
257
PRO
676
B
ASP
677
n
258
ASP
677
B
LEU
678
n
259
LEU
678
B
SER
679
n
260
SER
679
B
LYS
680
n
261
LYS
680
B
VAL
681
n
262
VAL
681
B
ARG
682
n
263
ARG
682
B
SER
683
n
264
SER
683
B
ASN
684
n
265
ASN
684
B
CYS
685
n
266
CYS
685
B
PRO
686
n
267
PRO
686
B
LYS
687
n
268
LYS
687
B
ALA
688
n
269
ALA
688
B
MET
689
n
270
MET
689
B
LYS
690
n
271
LYS
690
B
ARG
691
n
272
ARG
691
B
LEU
692
n
273
LEU
692
B
MET
693
n
274
MET
693
B
ALA
694
n
275
ALA
694
B
GLU
695
n
276
GLU
695
B
CYS
696
n
277
CYS
696
B
LEU
697
n
278
LEU
697
B
LYS
698
n
279
LYS
698
B
LYS
699
n
280
LYS
699
B
LYS
700
n
281
LYS
700
B
ARG
701
n
282
ARG
701
B
ASP
702
n
283
ASP
702
B
GLU
703
n
284
GLU
703
B
ARG
704
n
285
ARG
704
B
PRO
705
n
286
PRO
705
B
LEU
706
n
287
LEU
706
B
PHE
707
n
288
PHE
707
B
PRO
708
n
289
PRO
708
B
GLN
709
n
290
GLN
709
B
ILE
710
n
291
ILE
710
B
LEU
711
n
292
LEU
711
B
ALA
712
n
293
ALA
712
B
SER
713
n
294
SER
713
B
ILE
714
n
295
ILE
714
B
GLU
715
n
296
GLU
715
B
LEU
716
n
297
LEU
716
B
LEU
717
n
298
LEU
717
B
ALA
718
n
299
ALA
718
B
ARG
719
n
300
ARG
719
B
SER
720
n
301
SER
720
B
LEU
721
n
302
LEU
721
B
PRO
722
n
303
PRO
722
B
LYS
723
n
304
LYS
723
B
n
305
724
B
n
306
725
B
n
307
726
B
software_defined_assembly
PISA
1
monomeric
software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLY
464
A
N
GLY
45
A
O
VAL
471
A
O
VAL
52
A
N
TYR
472
A
N
TYR
53
A
O
VAL
482
A
O
VAL
63
A
N
LYS
483
A
N
LYS
64
A
O
ILE
527
A
O
ILE
108
A
O
VAL
528
A
O
VAL
109
A
N
MET
517
A
N
MET
98
A
N
PHE
583
A
N
PHE
164
A
O
LYS
591
A
O
LYS
172
B
N
GLY
464
B
N
GLY
45
B
O
VAL
471
B
O
VAL
52
B
N
TYR
472
B
N
TYR
53
B
O
VAL
482
B
O
VAL
63
B
N
LYS
483
B
N
LYS
64
B
O
ILE
527
B
O
ILE
108
B
O
VAL
528
B
O
VAL
109
B
N
GLY
518
B
N
GLY
99
B
N
PHE
583
B
N
PHE
164
B
O
LYS
591
B
O
LYS
172
1
A
MET
420
A
MET
1
1
Y
1
A
ASP
421
A
ASP
2
1
Y
1
A
ARG
422
A
ARG
3
1
Y
1
A
GLY
423
A
GLY
4
1
Y
1
A
SER
424
A
SER
5
1
Y
1
A
HIS
425
A
HIS
6
1
Y
1
A
HIS
426
A
HIS
7
1
Y
1
A
HIS
427
A
HIS
8
1
Y
1
A
HIS
428
A
HIS
9
1
Y
1
A
HIS
429
A
HIS
10
1
Y
1
A
HIS
430
A
HIS
11
1
Y
1
A
GLY
431
A
GLY
12
1
Y
1
A
SER
432
A
SER
13
1
Y
1
A
GLU
433
A
GLU
14
1
Y
1
A
ASP
434
A
ASP
15
1
Y
1
A
ARG
435
A
ARG
16
1
Y
1
A
ASN
436
A
ASN
17
1
Y
1
A
ARG
437
A
ARG
18
1
Y
1
A
MET
438
A
MET
19
1
Y
1
A
LYS
439
A
LYS
20
1
Y
1
A
THR
440
A
THR
21
1
Y
1
A
LEU
441
A
LEU
22
1
Y
1
A
GLY
442
A
GLY
23
1
Y
1
A
ARG
443
A
ARG
24
1
Y
1
A
ARG
444
A
ARG
25
1
Y
1
A
ASP
445
A
ASP
26
1
Y
1
A
SER
446
A
SER
27
1
Y
1
A
SER
447
A
SER
28
1
Y
1
A
LYS
601
A
LYS
182
1
Y
1
A
SER
602
A
SER
183
1
Y
1
A
ARG
603
A
ARG
184
1
Y
1
A
TRP
604
A
TRP
185
1
Y
1
A
SER
605
A
SER
186
1
Y
1
A
GLY
606
A
GLY
187
1
Y
1
A
SER
607
A
SER
188
1
Y
1
A
HIS
608
A
HIS
189
1
Y
1
A
GLN
609
A
GLN
190
1
Y
1
A
PHE
610
A
PHE
191
1
Y
1
A
GLU
611
A
GLU
192
1
Y
1
A
GLN
612
A
GLN
193
1
Y
1
A
ILE
724
A
ILE
305
1
Y
1
A
HIS
725
A
HIS
306
1
Y
1
A
ARG
726
A
ARG
307
1
Y
1
B
MET
420
B
MET
1
1
Y
1
B
ASP
421
B
ASP
2
1
Y
1
B
ARG
422
B
ARG
3
1
Y
1
B
GLY
423
B
GLY
4
1
Y
1
B
SER
424
B
SER
5
1
Y
1
B
HIS
425
B
HIS
6
1
Y
1
B
HIS
426
B
HIS
7
1
Y
1
B
HIS
427
B
HIS
8
1
Y
1
B
HIS
428
B
HIS
9
1
Y
1
B
HIS
429
B
HIS
10
1
Y
1
B
HIS
430
B
HIS
11
1
Y
1
B
GLY
431
B
GLY
12
1
Y
1
B
SER
432
B
SER
13
1
Y
1
B
GLU
433
B
GLU
14
1
Y
1
B
ASP
434
B
ASP
15
1
Y
1
B
ARG
435
B
ARG
16
1
Y
1
B
ASN
436
B
ASN
17
1
Y
1
B
ARG
437
B
ARG
18
1
Y
1
B
MET
438
B
MET
19
1
Y
1
B
LYS
439
B
LYS
20
1
Y
1
B
THR
440
B
THR
21
1
Y
1
B
LEU
441
B
LEU
22
1
Y
1
B
GLY
442
B
GLY
23
1
Y
1
B
ARG
443
B
ARG
24
1
Y
1
B
ARG
444
B
ARG
25
1
Y
1
B
ASP
445
B
ASP
26
1
Y
1
B
SER
446
B
SER
27
1
Y
1
B
SER
447
B
SER
28
1
Y
1
B
LYS
601
B
LYS
182
1
Y
1
B
SER
602
B
SER
183
1
Y
1
B
ARG
603
B
ARG
184
1
Y
1
B
TRP
604
B
TRP
185
1
Y
1
B
SER
605
B
SER
186
1
Y
1
B
GLY
606
B
GLY
187
1
Y
1
B
SER
607
B
SER
188
1
Y
1
B
HIS
608
B
HIS
189
1
Y
1
B
GLN
609
B
GLN
190
1
Y
1
B
PHE
610
B
PHE
191
1
Y
1
B
GLU
611
B
GLU
192
1
Y
1
B
GLN
612
B
GLN
193
1
Y
1
B
ILE
724
B
ILE
305
1
Y
1
B
HIS
725
B
HIS
306
1
Y
1
B
ARG
726
B
ARG
307
1
Y
1
A
A
OE1
O28
GLU
SM5
501
1
2.08
1
A
A
LEU
ASN
485
486
-142.46
1
A
A
ASN
VAL
486
487
133.98
1
B
B
LEU
ASN
485
486
-139.78
1
B
B
ASN
VAL
486
487
134.31
1
-13.13
1.50
119.30
106.17
A
A
A
C
N
CA
LYS
PRO
PRO
522
523
523
Y
1
-14.35
1.50
119.30
104.95
B
B
B
C
N
CA
LYS
PRO
PRO
522
523
523
Y
1
9.28
1.50
119.30
128.58
B
B
B
C
N
CA
ASN
PRO
PRO
631
632
632
Y
1
A
ASP
449
-43.33
160.31
1
A
THR
488
61.85
-29.24
1
A
ALA
489
137.11
132.11
1
A
THR
491
-45.62
156.43
1
A
LEU
514
-36.16
130.06
1
A
GLN
530
-49.12
156.02
1
A
ASP
576
-155.27
33.96
1
A
LYS
578
178.49
163.71
1
A
GLU
586
48.90
23.31
1
A
ASP
587
59.92
-4.02
1
A
ASP
594
67.73
95.94
1
A
SER
614
-176.28
137.47
1
A
SER
616
-92.13
-69.99
1
A
ILE
617
81.10
-39.44
1
A
MET
627
-43.35
81.23
1
A
ASP
629
-153.82
-158.72
1
A
TYR
656
73.45
31.92
1
A
PRO
722
-55.60
-6.23
1
B
ASP
449
-40.55
164.86
1
B
GLN
461
-36.56
125.63
1
B
THR
488
61.73
-32.53
1
B
ALA
489
142.37
133.89
1
B
THR
491
-48.18
157.29
1
B
HIS
510
-171.48
131.18
1
B
GLN
530
-49.95
154.70
1
B
ASP
576
-152.40
33.86
1
B
LYS
578
176.42
159.70
1
B
ASP
587
60.20
-5.45
1
B
ASP
594
64.55
97.83
1
B
SER
614
-176.80
137.66
1
B
SER
616
-95.43
-67.47
1
B
ILE
617
80.91
-41.16
1
B
MET
627
-43.40
83.62
1
B
ASP
629
-155.21
-158.31
1
B
PRO
722
-56.87
-6.54
protein_rep.param
water_rep.param
ion.param
AR00384000.par
57.621
-0.189
0.000
0.000
-0.189
0.000
0.378
0.250
0.216
2.800
30.000
1002
20683
20642
4.700
97.800
Random
1
0.00
2.5
Engh & Huber
2.800
30.000
23
4293
56
0
4214
0.020
1.657
51.8
2.8
50.0
3D4Q
20683
20661
0
2.5
0.074
1
8.8
88.7
0.408
2.8
2.91
3.5
2002
8.9
64.4
refinement
Axel T. Brunger
axel.brunger@yale.edu
Fortran_77
http://cns.csb.yale.edu/v1.1/
CNS
package
data extraction
PDB
sw-help@rcsb.rutgers.edu
September 10, 2007
C++
http://pdb.rutgers.edu/software/
PDB_EXTRACT
package
3.005
data collection
ADSC
Quantum
data reduction
DENZO
data scaling
SCALEPACK
phasing
MOLREP
Pyrazole-based inhibitors of B-Raf kinase
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
A
THR
491
A
THR
72
HELX_P
A
ARG
506
A
ARG
87
1
1
16
A
SER
536
A
SER
117
HELX_P
A
ILE
543
A
ILE
124
1
2
8
A
GLU
549
A
GLU
130
HELX_P
A
LYS
570
A
LYS
151
1
3
22
A
GLU
586
A
GLU
167
HELX_P
A
LEU
588
A
LEU
169
5
4
3
A
ALA
621
A
ALA
202
HELX_P
A
ARG
626
A
ARG
207
1
5
6
A
SER
634
A
SER
215
HELX_P
A
GLY
652
A
GLY
233
1
6
19
A
ASN
661
A
ASN
242
HELX_P
A
ARG
671
A
ARG
252
1
7
11
A
ASP
677
A
ASP
258
HELX_P
A
VAL
681
A
VAL
262
5
8
5
A
PRO
686
A
PRO
267
HELX_P
A
LEU
697
A
LEU
278
1
9
12
A
LYS
700
A
LYS
281
HELX_P
A
ARG
704
A
ARG
285
5
10
5
A
LEU
706
A
LEU
287
HELX_P
A
SER
720
A
SER
301
1
11
15
B
THR
491
B
THR
72
HELX_P
B
ARG
506
B
ARG
87
1
12
16
B
SER
536
B
SER
117
HELX_P
B
ILE
543
B
ILE
124
1
13
8
B
GLU
549
B
GLU
130
HELX_P
B
LYS
570
B
LYS
151
1
14
22
B
GLU
586
B
GLU
167
HELX_P
B
LEU
588
B
LEU
169
5
15
3
B
ALA
621
B
ALA
202
HELX_P
B
ARG
626
B
ARG
207
1
16
6
B
SER
634
B
SER
215
HELX_P
B
GLY
652
B
GLY
233
1
17
19
B
ASN
661
B
ASN
242
HELX_P
B
GLY
672
B
GLY
253
1
18
12
B
ASP
677
B
ASP
258
HELX_P
B
VAL
681
B
VAL
262
5
19
5
B
PRO
686
B
PRO
267
HELX_P
B
LEU
697
B
LEU
278
1
20
12
B
LYS
700
B
LYS
281
HELX_P
B
ARG
704
B
ARG
285
5
21
5
B
LEU
706
B
LEU
287
HELX_P
B
SER
720
B
SER
301
1
22
15
TRANSFERASE
Kinase, ATP-binding, Cardiomyopathy, Disease mutation, Metal-binding, Nucleotide-binding, Phorbol-ester binding, Phosphoprotein, Proto-oncogene, Serine/threonine-protein kinase, Transferase, Zinc-finger
BRAF1_HUMAN
UNP
1
433
P15056
EDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN
ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI
GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG
YLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIHR
433
726
3D4Q
433
726
P15056
A
1
14
307
433
726
3D4Q
433
726
P15056
B
1
14
307
1
expression tag
MET
420
3D4Q
A
P15056
UNP
1
1
expression tag
ASP
421
3D4Q
A
P15056
UNP
2
1
expression tag
ARG
422
3D4Q
A
P15056
UNP
3
1
expression tag
GLY
423
3D4Q
A
P15056
UNP
4
1
expression tag
SER
424
3D4Q
A
P15056
UNP
5
1
expression tag
HIS
425
3D4Q
A
P15056
UNP
6
1
expression tag
HIS
426
3D4Q
A
P15056
UNP
7
1
expression tag
HIS
427
3D4Q
A
P15056
UNP
8
1
expression tag
HIS
428
3D4Q
A
P15056
UNP
9
1
expression tag
HIS
429
3D4Q
A
P15056
UNP
10
1
expression tag
HIS
430
3D4Q
A
P15056
UNP
11
1
expression tag
GLY
431
3D4Q
A
P15056
UNP
12
1
expression tag
SER
432
3D4Q
A
P15056
UNP
13
2
expression tag
MET
420
3D4Q
B
P15056
UNP
1
2
expression tag
ASP
421
3D4Q
B
P15056
UNP
2
2
expression tag
ARG
422
3D4Q
B
P15056
UNP
3
2
expression tag
GLY
423
3D4Q
B
P15056
UNP
4
2
expression tag
SER
424
3D4Q
B
P15056
UNP
5
2
expression tag
HIS
425
3D4Q
B
P15056
UNP
6
2
expression tag
HIS
426
3D4Q
B
P15056
UNP
7
2
expression tag
HIS
427
3D4Q
B
P15056
UNP
8
2
expression tag
HIS
428
3D4Q
B
P15056
UNP
9
2
expression tag
HIS
429
3D4Q
B
P15056
UNP
10
2
expression tag
HIS
430
3D4Q
B
P15056
UNP
11
2
expression tag
GLY
431
3D4Q
B
P15056
UNP
12
2
expression tag
SER
432
3D4Q
B
P15056
UNP
13
5
2
5
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
THR
458
A
THR
39
A
GLY
466
A
GLY
47
A
GLY
469
A
GLY
50
A
LYS
475
A
LYS
56
A
ASP
479
A
ASP
60
A
MET
484
A
MET
65
A
ALA
526
A
ALA
107
A
GLN
530
A
GLN
111
A
PHE
516
A
PHE
97
A
SER
520
A
SER
101
A
ILE
582
A
ILE
163
A
HIS
585
A
HIS
166
A
THR
589
A
THR
170
A
ILE
592
A
ILE
173
B
THR
458
B
THR
39
B
GLY
466
B
GLY
47
B
GLY
469
B
GLY
50
B
LYS
475
B
LYS
56
B
ASP
479
B
ASP
60
B
MET
484
B
MET
65
B
ALA
526
B
ALA
107
B
GLN
530
B
GLN
111
B
PHE
516
B
PHE
97
B
SER
520
B
SER
101
B
ILE
582
B
ILE
163
B
HIS
585
B
HIS
166
B
THR
589
B
THR
170
B
ILE
592
B
ILE
173
BINDING SITE FOR RESIDUE SM5 A 1
A
SM5
1
Software
11
BINDING SITE FOR RESIDUE SM5 B 1
B
SM5
1
Software
11
A
ILE
463
A
ILE
44
11
1_555
A
GLY
464
A
GLY
45
11
1_555
A
SER
465
A
SER
46
11
1_555
A
ALA
481
A
ALA
62
11
1_555
A
LYS
483
A
LYS
64
11
1_555
A
GLU
501
A
GLU
82
11
1_555
A
TRP
531
A
TRP
112
11
1_555
A
CYS
532
A
CYS
113
11
1_555
A
PHE
583
A
PHE
164
11
1_555
A
ASP
594
A
ASP
175
11
1_555
B
TYR
673
B
TYR
254
11
6_554
B
ILE
463
B
ILE
44
11
1_555
B
GLY
464
B
GLY
45
11
1_555
B
SER
465
B
SER
46
11
1_555
B
ALA
481
B
ALA
62
11
1_555
B
LYS
483
B
LYS
64
11
1_555
B
GLU
501
B
GLU
82
11
1_555
B
GLN
530
B
GLN
111
11
1_555
B
TRP
531
B
TRP
112
11
1_555
B
CYS
532
B
CYS
113
11
1_555
B
PHE
583
B
PHE
164
11
1_555
B
ASP
594
B
ASP
175
11
1_555
92
P 41 21 2