0.015969 0.000000 0.000000 0.000000 0.015969 0.000000 0.000000 0.000000 0.007468 0.00000 0.00000 0.00000 Chang, C. Wu, R. Cobb, G. Joachimiak, A. Midwest Center for Structural Genomics (MCSG) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 62.620 62.620 133.913 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking O4 P -3 94.971 PHOSPHATE ION non-polymer C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking To be Published 0353 Crystal structure of Putative haloacid dehalogenase-like hydrolase from Bacteroides fragilis 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2008-04-07 CUSTOM-MADE double crystal SINGLE WAVELENGTH M x-ray 1 0.97857 1.0 19-BM APS 0.97857 SYNCHROTRON APS BEAMLINE 19-BM 25315.854 Putative haloacid dehalogenase-like hydrolase 1 man polymer 94.971 PHOSPHATE ION 2 syn non-polymer 92.094 GLYCEROL 1 syn non-polymer 18.015 water 222 nat water no yes SNA(MSE)KYTVYLFDFDYTLADSSRGIVTCFRSVLERHGYTGITDD(MSE)IKRTIGKTLEESFSILTGITDADQLESF RQEYSKEADIY(MSE)NANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNH(MSE)PDDWFDIIIGGEDVTHH KPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSG(MSE)TTAQEFQAYPYDRIISTLGQLISVPEDK SGCPL SNAMKYTVYLFDFDYTLADSSRGIVTCFRSVLERHGYTGITDDMIKRTIGKTLEESFSILTGITDADQLESFRQEYSKEA DIYMNANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKA CPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLISVPEDKSGCPL A APC60104 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) sample BF0931 272559 Bacteroides fragilis NCTC 9343 Escherichia coli BL21(DE3)magic plasmid pMCSG19b 1 2.59 52.56 VAPOR DIFFUSION, SITTING DROP 5.0 1.0 M Sodium phosphate pH5.0, VAPOR DIFFUSION, SITTING DROP, temperature 289K 289 Midwest Center for Structural Genomics MCSG PSI, Protein Structure Initiative repository Initial release Advisory Version format compliance 1 0 2008-07-15 1 1 2011-07-13 Y RCSB Y RCSB 2008-05-19 REL REL PO4 PHOSPHATE ION GOL GLYCEROL HOH water PO4 251 2 PO4 PO4 251 A PO4 252 2 PO4 PO4 252 A GOL 253 3 GOL GOL 253 A HOH 1 4 HOH HOH 254 A HOH 2 4 HOH HOH 255 A HOH 3 4 HOH HOH 256 A HOH 4 4 HOH HOH 257 A HOH 5 4 HOH HOH 258 A HOH 6 4 HOH HOH 259 A HOH 7 4 HOH HOH 260 A HOH 8 4 HOH HOH 261 A HOH 9 4 HOH HOH 262 A HOH 10 4 HOH HOH 263 A HOH 11 4 HOH HOH 264 A HOH 12 4 HOH HOH 265 A HOH 13 4 HOH HOH 266 A HOH 14 4 HOH HOH 267 A HOH 15 4 HOH HOH 268 A HOH 16 4 HOH HOH 269 A HOH 17 4 HOH HOH 270 A HOH 18 4 HOH HOH 271 A HOH 19 4 HOH HOH 272 A HOH 20 4 HOH HOH 273 A HOH 21 4 HOH HOH 274 A HOH 22 4 HOH HOH 275 A HOH 23 4 HOH HOH 276 A HOH 24 4 HOH HOH 277 A HOH 25 4 HOH HOH 278 A HOH 26 4 HOH HOH 279 A HOH 27 4 HOH HOH 280 A HOH 28 4 HOH HOH 281 A HOH 29 4 HOH HOH 282 A HOH 30 4 HOH HOH 283 A HOH 31 4 HOH HOH 284 A HOH 32 4 HOH HOH 285 A HOH 33 4 HOH HOH 286 A HOH 34 4 HOH HOH 287 A HOH 35 4 HOH HOH 288 A HOH 36 4 HOH HOH 289 A HOH 37 4 HOH HOH 290 A HOH 38 4 HOH HOH 291 A HOH 39 4 HOH HOH 292 A HOH 40 4 HOH HOH 293 A HOH 41 4 HOH HOH 294 A HOH 42 4 HOH HOH 295 A HOH 43 4 HOH HOH 296 A HOH 44 4 HOH HOH 297 A HOH 45 4 HOH HOH 298 A HOH 46 4 HOH HOH 299 A HOH 47 4 HOH HOH 300 A HOH 48 4 HOH HOH 301 A HOH 49 4 HOH HOH 302 A HOH 50 4 HOH HOH 303 A HOH 51 4 HOH HOH 304 A HOH 52 4 HOH HOH 305 A HOH 53 4 HOH HOH 306 A HOH 54 4 HOH HOH 307 A HOH 55 4 HOH HOH 308 A HOH 56 4 HOH HOH 309 A HOH 57 4 HOH HOH 310 A HOH 58 4 HOH HOH 311 A HOH 59 4 HOH HOH 312 A HOH 60 4 HOH HOH 313 A HOH 61 4 HOH HOH 314 A HOH 62 4 HOH HOH 315 A HOH 63 4 HOH HOH 316 A HOH 64 4 HOH HOH 317 A HOH 65 4 HOH HOH 318 A HOH 66 4 HOH HOH 319 A HOH 67 4 HOH HOH 320 A HOH 68 4 HOH HOH 321 A HOH 69 4 HOH HOH 322 A HOH 70 4 HOH HOH 323 A HOH 71 4 HOH HOH 324 A HOH 72 4 HOH HOH 325 A HOH 73 4 HOH HOH 326 A HOH 74 4 HOH HOH 327 A HOH 75 4 HOH HOH 328 A HOH 76 4 HOH HOH 329 A HOH 77 4 HOH HOH 330 A HOH 78 4 HOH HOH 331 A HOH 79 4 HOH HOH 332 A HOH 80 4 HOH HOH 333 A HOH 81 4 HOH HOH 334 A HOH 82 4 HOH HOH 335 A HOH 83 4 HOH HOH 336 A HOH 84 4 HOH HOH 337 A HOH 85 4 HOH HOH 338 A HOH 86 4 HOH HOH 339 A HOH 87 4 HOH HOH 340 A HOH 88 4 HOH HOH 341 A HOH 89 4 HOH HOH 342 A HOH 90 4 HOH HOH 343 A HOH 91 4 HOH HOH 344 A HOH 92 4 HOH HOH 345 A HOH 93 4 HOH HOH 346 A HOH 94 4 HOH HOH 347 A HOH 95 4 HOH HOH 348 A HOH 96 4 HOH HOH 349 A HOH 97 4 HOH HOH 350 A HOH 98 4 HOH HOH 351 A HOH 99 4 HOH HOH 352 A HOH 100 4 HOH HOH 353 A HOH 101 4 HOH HOH 354 A HOH 102 4 HOH HOH 355 A HOH 103 4 HOH HOH 356 A HOH 104 4 HOH HOH 357 A HOH 105 4 HOH HOH 358 A HOH 106 4 HOH HOH 359 A HOH 107 4 HOH HOH 360 A HOH 108 4 HOH HOH 361 A HOH 109 4 HOH HOH 362 A HOH 110 4 HOH HOH 363 A HOH 111 4 HOH HOH 364 A HOH 112 4 HOH HOH 365 A HOH 113 4 HOH HOH 366 A HOH 114 4 HOH HOH 367 A HOH 115 4 HOH HOH 368 A HOH 116 4 HOH HOH 369 A HOH 117 4 HOH HOH 370 A HOH 118 4 HOH HOH 371 A HOH 119 4 HOH HOH 372 A HOH 120 4 HOH HOH 373 A HOH 121 4 HOH HOH 374 A HOH 122 4 HOH HOH 375 A HOH 123 4 HOH HOH 376 A HOH 124 4 HOH HOH 377 A HOH 125 4 HOH HOH 378 A HOH 126 4 HOH HOH 379 A HOH 127 4 HOH HOH 380 A HOH 128 4 HOH HOH 381 A HOH 129 4 HOH HOH 382 A HOH 130 4 HOH HOH 383 A HOH 131 4 HOH HOH 384 A HOH 132 4 HOH HOH 385 A HOH 133 4 HOH HOH 386 A HOH 134 4 HOH HOH 387 A HOH 135 4 HOH HOH 388 A HOH 136 4 HOH HOH 389 A HOH 137 4 HOH HOH 390 A HOH 138 4 HOH HOH 391 A HOH 139 4 HOH HOH 392 A HOH 140 4 HOH HOH 393 A HOH 141 4 HOH HOH 394 A HOH 142 4 HOH HOH 395 A HOH 143 4 HOH HOH 396 A HOH 144 4 HOH HOH 397 A HOH 145 4 HOH HOH 398 A HOH 146 4 HOH HOH 399 A HOH 147 4 HOH HOH 400 A HOH 148 4 HOH HOH 401 A HOH 149 4 HOH HOH 402 A HOH 150 4 HOH HOH 403 A HOH 151 4 HOH HOH 404 A HOH 152 4 HOH HOH 405 A HOH 153 4 HOH HOH 406 A HOH 154 4 HOH HOH 407 A HOH 155 4 HOH HOH 408 A HOH 156 4 HOH HOH 409 A HOH 157 4 HOH HOH 410 A HOH 158 4 HOH HOH 411 A HOH 159 4 HOH HOH 412 A HOH 160 4 HOH HOH 413 A HOH 161 4 HOH HOH 414 A HOH 162 4 HOH HOH 415 A HOH 163 4 HOH HOH 416 A HOH 164 4 HOH HOH 417 A HOH 165 4 HOH HOH 418 A HOH 166 4 HOH HOH 419 A HOH 167 4 HOH HOH 420 A HOH 168 4 HOH HOH 421 A HOH 169 4 HOH HOH 422 A HOH 170 4 HOH HOH 423 A HOH 171 4 HOH HOH 424 A HOH 172 4 HOH HOH 425 A HOH 173 4 HOH HOH 426 A HOH 174 4 HOH HOH 427 A HOH 175 4 HOH HOH 428 A HOH 176 4 HOH HOH 429 A HOH 177 4 HOH HOH 430 A HOH 178 4 HOH HOH 431 A HOH 179 4 HOH HOH 432 A HOH 180 4 HOH HOH 433 A HOH 181 4 HOH HOH 434 A HOH 182 4 HOH HOH 435 A HOH 183 4 HOH HOH 436 A HOH 184 4 HOH HOH 437 A HOH 185 4 HOH HOH 438 A HOH 186 4 HOH HOH 439 A HOH 187 4 HOH HOH 440 A HOH 188 4 HOH HOH 441 A HOH 189 4 HOH HOH 442 A HOH 190 4 HOH HOH 443 A HOH 191 4 HOH HOH 444 A HOH 192 4 HOH HOH 445 A HOH 193 4 HOH HOH 446 A HOH 194 4 HOH HOH 447 A HOH 195 4 HOH HOH 448 A HOH 196 4 HOH HOH 449 A HOH 197 4 HOH HOH 450 A HOH 198 4 HOH HOH 451 A HOH 199 4 HOH HOH 452 A HOH 200 4 HOH HOH 453 A HOH 201 4 HOH HOH 454 A HOH 202 4 HOH HOH 455 A HOH 203 4 HOH HOH 456 A HOH 204 4 HOH HOH 457 A HOH 205 4 HOH HOH 458 A HOH 206 4 HOH HOH 459 A HOH 207 4 HOH HOH 460 A HOH 208 4 HOH HOH 461 A HOH 209 4 HOH HOH 462 A HOH 210 4 HOH HOH 463 A HOH 211 4 HOH HOH 464 A HOH 212 4 HOH HOH 465 A HOH 213 4 HOH HOH 466 A HOH 214 4 HOH HOH 467 A HOH 215 4 HOH HOH 468 A HOH 216 4 HOH HOH 469 A HOH 217 4 HOH HOH 470 A HOH 218 4 HOH HOH 471 A HOH 219 4 HOH HOH 472 A HOH 220 4 HOH HOH 473 A HOH 221 4 HOH HOH 474 A HOH 222 4 HOH HOH 475 A n 1 -2 A n 2 -1 A n 3 0 A n 4 1 A LYS 2 n 5 LYS 2 A TYR 3 n 6 TYR 3 A THR 4 n 7 THR 4 A VAL 5 n 8 VAL 5 A TYR 6 n 9 TYR 6 A LEU 7 n 10 LEU 7 A PHE 8 n 11 PHE 8 A ASP 9 n 12 ASP 9 A PHE 10 n 13 PHE 10 A ASP 11 n 14 ASP 11 A TYR 12 n 15 TYR 12 A THR 13 n 16 THR 13 A LEU 14 n 17 LEU 14 A ALA 15 n 18 ALA 15 A ASP 16 n 19 ASP 16 A SER 17 n 20 SER 17 A SER 18 n 21 SER 18 A ARG 19 n 22 ARG 19 A GLY 20 n 23 GLY 20 A ILE 21 n 24 ILE 21 A VAL 22 n 25 VAL 22 A THR 23 n 26 THR 23 A CYS 24 n 27 CYS 24 A PHE 25 n 28 PHE 25 A ARG 26 n 29 ARG 26 A SER 27 n 30 SER 27 A VAL 28 n 31 VAL 28 A LEU 29 n 32 LEU 29 A GLU 30 n 33 GLU 30 A ARG 31 n 34 ARG 31 A HIS 32 n 35 HIS 32 A GLY 33 n 36 GLY 33 A TYR 34 n 37 TYR 34 A THR 35 n 38 THR 35 A GLY 36 n 39 GLY 36 A ILE 37 n 40 ILE 37 A THR 38 n 41 THR 38 A ASP 39 n 42 ASP 39 A ASP 40 n 43 ASP 40 A MSE 41 n 44 MSE 41 A ILE 42 n 45 ILE 42 A LYS 43 n 46 LYS 43 A ARG 44 n 47 ARG 44 A THR 45 n 48 THR 45 A ILE 46 n 49 ILE 46 A GLY 47 n 50 GLY 47 A LYS 48 n 51 LYS 48 A THR 49 n 52 THR 49 A LEU 50 n 53 LEU 50 A GLU 51 n 54 GLU 51 A GLU 52 n 55 GLU 52 A SER 53 n 56 SER 53 A PHE 54 n 57 PHE 54 A SER 55 n 58 SER 55 A ILE 56 n 59 ILE 56 A LEU 57 n 60 LEU 57 A THR 58 n 61 THR 58 A GLY 59 n 62 GLY 59 A ILE 60 n 63 ILE 60 A THR 61 n 64 THR 61 A ASP 62 n 65 ASP 62 A ALA 63 n 66 ALA 63 A ASP 64 n 67 ASP 64 A GLN 65 n 68 GLN 65 A LEU 66 n 69 LEU 66 A GLU 67 n 70 GLU 67 A SER 68 n 71 SER 68 A PHE 69 n 72 PHE 69 A ARG 70 n 73 ARG 70 A GLN 71 n 74 GLN 71 A GLU 72 n 75 GLU 72 A TYR 73 n 76 TYR 73 A SER 74 n 77 SER 74 A LYS 75 n 78 LYS 75 A GLU 76 n 79 GLU 76 A ALA 77 n 80 ALA 77 A ASP 78 n 81 ASP 78 A ILE 79 n 82 ILE 79 A TYR 80 n 83 TYR 80 A MSE 81 n 84 MSE 81 A ASN 82 n 85 ASN 82 A ALA 83 n 86 ALA 83 A ASN 84 n 87 ASN 84 A THR 85 n 88 THR 85 A ILE 86 n 89 ILE 86 A LEU 87 n 90 LEU 87 A PHE 88 n 91 PHE 88 A PRO 89 n 92 PRO 89 A ASP 90 n 93 ASP 90 A THR 91 n 94 THR 91 A LEU 92 n 95 LEU 92 A PRO 93 n 96 PRO 93 A THR 94 n 97 THR 94 A LEU 95 n 98 LEU 95 A THR 96 n 99 THR 96 A HIS 97 n 100 HIS 97 A LEU 98 n 101 LEU 98 A LYS 99 n 102 LYS 99 A LYS 100 n 103 LYS 100 A GLN 101 n 104 GLN 101 A GLY 102 n 105 GLY 102 A ILE 103 n 106 ILE 103 A ARG 104 n 107 ARG 104 A ILE 105 n 108 ILE 105 A GLY 106 n 109 GLY 106 A ILE 107 n 110 ILE 107 A ILE 108 n 111 ILE 108 A SER 109 n 112 SER 109 A THR 110 n 113 THR 110 A LYS 111 n 114 LYS 111 A TYR 112 n 115 TYR 112 A ARG 113 n 116 ARG 113 A PHE 114 n 117 PHE 114 A ARG 115 n 118 ARG 115 A ILE 116 n 119 ILE 116 A LEU 117 n 120 LEU 117 A SER 118 n 121 SER 118 A PHE 119 n 122 PHE 119 A LEU 120 n 123 LEU 120 A ARG 121 n 124 ARG 121 A ASN 122 n 125 ASN 122 A HIS 123 n 126 HIS 123 A MSE 124 n 127 MSE 124 A PRO 125 n 128 PRO 125 A ASP 126 n 129 ASP 126 A ASP 127 n 130 ASP 127 A TRP 128 n 131 TRP 128 A PHE 129 n 132 PHE 129 A ASP 130 n 133 ASP 130 A ILE 131 n 134 ILE 131 A ILE 132 n 135 ILE 132 A ILE 133 n 136 ILE 133 A GLY 134 n 137 GLY 134 A GLY 135 n 138 GLY 135 A GLU 136 n 139 GLU 136 A ASP 137 n 140 ASP 137 A VAL 138 n 141 VAL 138 A THR 139 n 142 THR 139 A HIS 140 n 143 HIS 140 A HIS 141 n 144 HIS 141 A LYS 142 n 145 LYS 142 A PRO 143 n 146 PRO 143 A ASP 144 n 147 ASP 144 A PRO 145 n 148 PRO 145 A GLU 146 n 149 GLU 146 A GLY 147 n 150 GLY 147 A LEU 148 n 151 LEU 148 A LEU 149 n 152 LEU 149 A LEU 150 n 153 LEU 150 A ALA 151 n 154 ALA 151 A ILE 152 n 155 ILE 152 A ASP 153 n 156 ASP 153 A ARG 154 n 157 ARG 154 A LEU 155 n 158 LEU 155 A LYS 156 n 159 LYS 156 A ALA 157 n 160 ALA 157 A CYS 158 n 161 CYS 158 A PRO 159 n 162 PRO 159 A GLU 160 n 163 GLU 160 A GLU 161 n 164 GLU 161 A VAL 162 n 165 VAL 162 A LEU 163 n 166 LEU 163 A TYR 164 n 167 TYR 164 A ILE 165 n 168 ILE 165 A GLY 166 n 169 GLY 166 A ASP 167 n 170 ASP 167 A SER 168 n 171 SER 168 A THR 169 n 172 THR 169 A VAL 170 n 173 VAL 170 A ASP 171 n 174 ASP 171 A ALA 172 n 175 ALA 172 A GLY 173 n 176 GLY 173 A THR 174 n 177 THR 174 A ALA 175 n 178 ALA 175 A ALA 176 n 179 ALA 176 A ALA 177 n 180 ALA 177 A ALA 178 n 181 ALA 178 A GLY 179 n 182 GLY 179 A VAL 180 n 183 VAL 180 A SER 181 n 184 SER 181 A PHE 182 n 185 PHE 182 A THR 183 n 186 THR 183 A GLY 184 n 187 GLY 184 A VAL 185 n 188 VAL 185 A THR 186 n 189 THR 186 A SER 187 n 190 SER 187 A GLY 188 n 191 GLY 188 A MSE 189 n 192 MSE 189 A THR 190 n 193 THR 190 A THR 191 n 194 THR 191 A ALA 192 n 195 ALA 192 A GLN 193 n 196 GLN 193 A GLU 194 n 197 GLU 194 A PHE 195 n 198 PHE 195 A GLN 196 n 199 GLN 196 A ALA 197 n 200 ALA 197 A TYR 198 n 201 TYR 198 A PRO 199 n 202 PRO 199 A TYR 200 n 203 TYR 200 A ASP 201 n 204 ASP 201 A ARG 202 n 205 ARG 202 A ILE 203 n 206 ILE 203 A ILE 204 n 207 ILE 204 A SER 205 n 208 SER 205 A THR 206 n 209 THR 206 A LEU 207 n 210 LEU 207 A GLY 208 n 211 GLY 208 A GLN 209 n 212 GLN 209 A LEU 210 n 213 LEU 210 A ILE 211 n 214 ILE 211 A n 215 212 A n 216 213 A n 217 214 A n 218 215 A n 219 216 A n 220 217 A n 221 218 A n 222 219 A n 223 220 A n 224 221 A n 225 222 A 1.8490 0.0997 0.0885 2.6804 0.3828 2.7259 -0.0449 0.0559 0.3375 -0.1319 -0.1091 0.5282 -0.5110 -0.1753 0.1540 -0.0139 0.0352 -0.0385 0.0035 -0.0467 0.0658 refined 0.6269 43.4623 81.4372 X-RAY DIFFRACTION 0.8721 -0.9724 -0.1680 3.8098 -0.2157 2.0011 -0.0774 -0.0244 0.0404 0.2041 0.0214 -0.1027 -0.0071 0.0715 0.0560 -0.0980 -0.0185 -0.0243 -0.0694 -0.0201 -0.0927 refined 18.1141 32.2150 91.1474 X-RAY DIFFRACTION 0.9117 0.2158 0.3860 2.0009 0.8975 2.6228 -0.0042 0.0095 -0.0550 -0.0638 -0.2388 0.4155 0.0296 -0.2114 0.2431 -0.1529 0.0095 -0.0310 -0.0276 -0.0962 -0.0389 refined -0.5692 31.0200 77.0962 X-RAY DIFFRACTION A 2 A 5 A 16 A 19 X-RAY DIFFRACTION 1 A 88 A 91 A 136 A 139 X-RAY DIFFRACTION 1 A 17 A 20 A 87 A 90 X-RAY DIFFRACTION 2 A 137 A 140 A 211 A 214 X-RAY DIFFRACTION 3 author_and_software_defined_assembly PISA 1 monomeric A MSE 41 SELENOMETHIONINE A MSE 44 MET A MSE 81 SELENOMETHIONINE A MSE 84 MET A MSE 124 SELENOMETHIONINE A MSE 127 MET A MSE 189 SELENOMETHIONINE A MSE 192 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O ILE 133 A O ILE 136 A N ILE 107 A N ILE 110 A O GLY 106 A O GLY 109 A N PHE 8 A N PHE 11 A N LEU 7 A N LEU 10 A O LEU 163 A O LEU 166 A N TYR 164 A N TYR 167 A O SER 181 A O SER 184 A N GLY 184 A N GLY 187 A O ILE 204 A O ILE 207 A N ASP 16 A N ASP 19 A O ILE 86 A O ILE 89 1 A SER -2 A SER 1 1 Y 1 A ASN -1 A ASN 2 1 Y 1 A ALA 0 A ALA 3 1 Y 1 A MSE 1 A MSE 4 1 Y 1 A SER 212 A SER 215 1 Y 1 A VAL 213 A VAL 216 1 Y 1 A PRO 214 A PRO 217 1 Y 1 A GLU 215 A GLU 218 1 Y 1 A ASP 216 A ASP 219 1 Y 1 A LYS 217 A LYS 220 1 Y 1 A SER 218 A SER 221 1 Y 1 A GLY 219 A GLY 222 1 Y 1 A CYS 220 A CYS 223 1 Y 1 A PRO 221 A PRO 224 1 Y 1 A LEU 222 A LEU 225 1 Y 1 A A O O MSE HOH 124 475 2.14 1 A A OE1 O GLU HOH 72 470 2.19 1 A A TRP PHE 128 129 -96.76 1 -17.94 2.70 111.00 93.06 A A A N CA C PHE PHE PHE 129 129 129 N 1 A PHE 10 -102.76 -71.02 1 A THR 13 -120.40 -59.05 1 A HIS 123 -128.63 -72.91 1 A THR 186 -79.99 44.35 29.087 1.44 0.00 0.00 1.44 0.00 -2.87 0.945 0.927 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.235 0.19786 0.19975 0.19975 2.00 50 940 18404 18404 5.1 98.18 8.272 0.126 RANDOM LIKELY RESIDUAL 1 THROUGHOUT 0 SAD 0.182 0.161 0.80 0.80 1.20 MAXIMUM LIKELIHOOD MASK 2.00 50 222 1896 16 0 1658 0.015 0.022 1762 1.525 1.972 2400 8.750 5.000 226 35.542 23.205 78 14.759 15.000 306 17.862 15.000 13 0.120 0.200 276 0.006 0.020 1318 0.209 0.200 847 0.306 0.200 1216 0.180 0.200 207 0.215 0.200 29 0.174 0.200 20 0.740 1.500 1103 1.138 2.000 1749 2.021 3.000 743 2.931 4.500 643 0.31 0.243 2.052 80 1220 1300 20 97.16 24.0 2 50 3D6J 8776 18723 -3 0.103 1 27.52 9.6 99.7 0.428 2.0 2.02 3.17 465 1 6.5 100.0 refinement REFMAC 5.2.0019 data collection SBC-Collect data reduction HKL-3000 data scaling HKL-3000 phasing HKL-3000 Y Putative haloacid dehalogenase-like hydrolase Crystal structure of Putative haloacid dehalogenase-like hydrolase from Bacteroides fragilis 1 N N 2 N N 2 N N 3 N N 4 N N A SER 17 A SER 20 HELX_P A HIS 32 A HIS 35 1 1 16 A THR 38 A THR 41 HELX_P A ARG 44 A ARG 47 1 2 7 A THR 49 A THR 52 HELX_P A GLY 59 A GLY 62 1 3 11 A ASP 62 A ASP 65 HELX_P A MSE 81 A MSE 84 1 4 20 A ASN 82 A ASN 85 HELX_P A THR 85 A THR 88 5 5 4 A ASP 90 A ASP 93 HELX_P A GLY 102 A GLY 105 1 6 13 A TYR 112 A TYR 115 HELX_P A ASN 122 A ASN 125 1 7 11 A GLY 134 A GLY 137 HELX_P A VAL 138 A VAL 141 5 8 5 A PRO 145 A PRO 148 HELX_P A LEU 155 A LEU 158 1 9 11 A CYS 158 A CYS 161 HELX_P A GLU 160 A GLU 163 5 10 3 A SER 168 A SER 171 HELX_P A GLY 179 A GLY 182 1 11 12 A GLN 193 A GLN 196 HELX_P A TYR 198 A TYR 201 5 12 6 A THR 206 A THR 209 HELX_P A ILE 211 A ILE 214 5 13 6 covale 1.337 A ASP 40 A C ASP 43 1_555 A MSE 41 A N MSE 44 1_555 covale 1.318 A MSE 41 A C MSE 44 1_555 A ILE 42 A N ILE 45 1_555 covale 1.322 A TYR 80 A C TYR 83 1_555 A MSE 81 A N MSE 84 1_555 covale 1.328 A MSE 81 A C MSE 84 1_555 A ASN 82 A N ASN 85 1_555 covale 1.343 A HIS 123 A C HIS 126 1_555 A MSE 124 A N MSE 127 1_555 covale 1.350 A MSE 124 A C MSE 127 1_555 A PRO 125 A N PRO 128 1_555 covale 1.334 A GLY 188 A C GLY 191 1_555 A MSE 189 A N MSE 192 1_555 covale 1.329 A MSE 189 A C MSE 192 1_555 A THR 190 A N THR 193 1_555 HYDROLASE Bacteroides fragilis, haloacid dehalogenase-like hydrolase, Structural Genomics, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, Hydrolase A ASP 126 A ASP 129 1 A ASP 127 A ASP 130 -15.81 A LYS 142 A LYS 145 1 A PRO 143 A PRO 146 7.51 Q5LGR4_BACFN UNP 1 1 Q5LGR4 MKYTVYLFDFDYTLADSSRGIVTCFRSVLERHGYTGITDDMIKRTIGKTLEESFSILTGITDADQLESFRQEYSKEADIY MNANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPE EVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLISVPEDKSGCPL 1 222 3D6J 1 222 Q5LGR4 A 1 4 225 1 EXPRESSION TAG SER -2 3D6J A Q5LGR4 UNP 1 1 EXPRESSION TAG ASN -1 3D6J A Q5LGR4 UNP 2 1 EXPRESSION TAG ALA 0 3D6J A Q5LGR4 UNP 3 6 2 parallel parallel parallel parallel parallel anti-parallel A ILE 131 A ILE 134 A ILE 133 A ILE 136 A ARG 104 A ARG 107 A ILE 108 A ILE 111 A VAL 5 A VAL 8 A PHE 8 A PHE 11 A VAL 162 A VAL 165 A GLY 166 A GLY 169 A SER 181 A SER 184 A VAL 185 A VAL 188 A ARG 202 A ARG 205 A ILE 204 A ILE 207 A ALA 15 A ALA 18 A ASP 16 A ASP 19 A ILE 86 A ILE 89 A LEU 87 A LEU 90 BINDING SITE FOR RESIDUE PO4 A 251 Software 8 BINDING SITE FOR RESIDUE PO4 A 252 Software 9 BINDING SITE FOR RESIDUE GOL A 253 Software 6 A ASP 9 A ASP 12 8 1_555 A PHE 10 A PHE 13 8 1_555 A ASP 11 A ASP 14 8 1_555 A SER 109 A SER 112 8 1_555 A THR 110 A THR 113 8 1_555 A LYS 142 A LYS 145 8 1_555 A HOH 261 E HOH 8 1_555 A HOH 401 E HOH 8 1_555 A GLU 52 A GLU 55 9 1_555 A THR 139 A THR 142 9 1_555 A HIS 140 A HIS 143 9 1_555 A HIS 141 A HIS 144 9 1_555 A HOH 297 E HOH 9 1_555 A HOH 337 E HOH 9 1_555 A HOH 355 E HOH 9 1_555 A HOH 370 E HOH 9 1_555 A HOH 405 E HOH 9 1_555 A ASN 82 A ASN 85 6 1_555 A SER 118 A SER 121 6 1_555 A ASN 122 A ASN 125 6 1_555 A HOH 267 E HOH 6 1_555 A HOH 369 E HOH 6 1_555 A HOH 385 E HOH 6 1_555 92 P 41 21 2