0.023135 0.000000 0.000000 0.000000 0.011753 0.000000 0.000000 0.000000 0.015893 0.00000 0.00000 0.00000 Palaninathan, S.K. Mohamedmohaideen, N.N. Snee, W.C. Kelly, J.W. Sacchettini, J.C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 43.224 85.082 62.920 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N O N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N N N 108 N C N 109 N C N 110 N O N 111 N O N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N N N 118 S C N 119 N C N 120 N O N 121 N C Y 122 N C Y 123 N N Y 124 N C Y 125 N C Y 126 N N N 127 N O N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N O N 139 N H N 140 N H N 141 N N N 142 S C N 143 N C N 144 N O N 145 S C N 146 N C N 147 N C N 148 N C N 149 N O N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N N N 164 S C N 165 N C N 166 N O N 167 N C N 168 N C N 169 N C N 170 N C N 171 N O N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N N N 186 S C N 187 N C N 188 N O N 189 N C N 190 N C N 191 N C N 192 N C N 193 N N N 194 N O N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N N N 211 S C N 212 N C N 213 N O N 214 N C N 215 N C N 216 N S N 217 N C N 218 N O N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C Y 235 N C Y 236 N C Y 237 N C Y 238 N C Y 239 N C Y 240 N C N 241 N O N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N N N 254 S C N 255 N C N 256 N O N 257 N C N 258 N C N 259 N C N 260 N O N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N N N 271 S C N 272 N C N 273 N O N 274 N C N 275 N O N 276 N O N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N N N 285 S C N 286 N C N 287 N O N 288 R C N 289 N O N 290 N C N 291 N O N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N N N 302 S C N 303 N C N 304 N O N 305 N C Y 306 N C Y 307 N C Y 308 N C Y 309 N N Y 310 N C Y 311 N C Y 312 N C Y 313 N C Y 314 N C N 315 N O N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N N N 329 S C N 330 N C N 331 N O N 332 N C Y 333 N C Y 334 N C Y 335 N C Y 336 N C Y 337 N C Y 338 N C N 339 N O N 340 N O N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N N N 353 S C N 354 N C N 355 N O N 356 N C N 357 N C N 358 N C N 359 N O N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N doub N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing Y 121 N sing Y 122 N doub Y 123 N doub N 124 N sing Y 125 N sing N 126 N sing Y 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N doub N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N doub N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N doub N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N doub N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing Y 229 N doub Y 230 N sing Y 231 N sing N 232 N sing Y 233 N doub N 234 N sing Y 235 N doub N 236 N sing Y 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N doub N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N doub N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N doub N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N doub N 294 N sing N 295 N sing N 296 N sing N 297 N sing Y 298 N doub Y 299 N sing Y 300 N sing N 301 N sing Y 302 N doub Y 303 N sing Y 304 N sing N 305 N sing Y 306 N sing Y 307 N doub N 308 N sing Y 309 N doub N 310 N sing Y 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N doub N 322 N sing N 323 N sing N 324 N sing N 325 N sing Y 326 N doub Y 327 N sing Y 328 N sing N 329 N sing Y 330 N doub N 331 N sing Y 332 N doub N 333 N sing Y 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N doub N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing UK J.Mol.Biol. JMOBAK 0070 0022-2836 382 1157 1167 10.1016/j.jmb.2008.07.029 18662699 Structural insight into pH-induced conformational changes within the native human transthyretin tetramer. 2008 10.2210/pdb3d7p/pdb pdb_00003d7p 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 120 1 mirrors IMAGE PLATE 2003-01-10 MAC Science DIP-2030 MIRRORS SINGLE WAVELENGTH M x-ray 1 1.541 1.0 1.541 ROTATING ANODE RIGAKU RU200 13777.360 Transthyretin 2 man polymer 18.015 water 157 nat water Prealbumin, TBPA, TTR, ATTR no no GPTGTGESKCPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSYWK ALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYSTTAVVTNPKE GPTGTGESKCPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSYWK ALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYSTTAVVTNPKE A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Human sample TTR, PALB 9606 Homo sapiens Escherichia coli plasmid PHNTR, PKNTR 1 2.10 41.41 VAPOR DIFFUSION, HANGING DROP 4.0 TTR pH 4.0 crystals were grown in the presence of 0.1 M sodium acetate (pH 4.0), 100 mM KCl, 1 mM EDTA and 0.3-0.5 M ammonium sulfate which was equilibrated against 2 M ammonium sulfate in hanging drop, VAPOR DIFFUSION, HANGING DROP, temperature 289K 289 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_special_symmetry repository Initial release Version format compliance Data collection Database references Derived calculations Refinement description 1 0 2008-08-12 1 1 2011-07-13 1 2 2023-08-30 _database_2.pdbx_DOI _database_2.pdbx_database_accession wt-TTR at pH 7.4 wt-TTR at pH 3.5 RCSB Y RCSB 2008-05-21 REL REL HOH water 1BMZ PDB experimental model HOH 1 2 HOH HOH 128 A HOH 2 2 HOH HOH 129 A HOH 3 2 HOH HOH 130 A HOH 4 2 HOH HOH 131 A HOH 6 2 HOH HOH 132 A HOH 8 2 HOH HOH 133 A HOH 9 2 HOH HOH 134 A HOH 11 2 HOH HOH 135 A HOH 13 2 HOH HOH 136 A HOH 14 2 HOH HOH 137 A HOH 15 2 HOH HOH 138 A HOH 17 2 HOH HOH 139 A HOH 18 2 HOH HOH 140 A HOH 19 2 HOH HOH 141 A HOH 20 2 HOH HOH 142 A HOH 21 2 HOH HOH 143 A HOH 22 2 HOH HOH 144 A HOH 23 2 HOH HOH 145 A HOH 25 2 HOH HOH 146 A HOH 26 2 HOH HOH 147 A HOH 27 2 HOH HOH 148 A HOH 29 2 HOH HOH 149 A HOH 30 2 HOH HOH 150 A HOH 33 2 HOH HOH 151 A HOH 34 2 HOH HOH 152 A HOH 39 2 HOH HOH 153 A HOH 41 2 HOH HOH 154 A HOH 42 2 HOH HOH 155 A HOH 45 2 HOH HOH 156 A HOH 46 2 HOH HOH 157 A HOH 50 2 HOH HOH 158 A HOH 51 2 HOH HOH 159 A HOH 53 2 HOH HOH 160 A HOH 60 2 HOH HOH 161 A HOH 61 2 HOH HOH 162 A HOH 62 2 HOH HOH 163 A HOH 63 2 HOH HOH 164 A HOH 66 2 HOH HOH 165 A HOH 67 2 HOH HOH 166 A HOH 68 2 HOH HOH 167 A HOH 69 2 HOH HOH 168 A HOH 73 2 HOH HOH 169 A HOH 74 2 HOH HOH 170 A HOH 79 2 HOH HOH 171 A HOH 80 2 HOH HOH 172 A HOH 81 2 HOH HOH 173 A HOH 83 2 HOH HOH 174 A HOH 85 2 HOH HOH 175 A HOH 86 2 HOH HOH 176 A HOH 87 2 HOH HOH 177 A HOH 88 2 HOH HOH 178 A HOH 91 2 HOH HOH 179 A HOH 92 2 HOH HOH 180 A HOH 93 2 HOH HOH 181 A HOH 94 2 HOH HOH 182 A HOH 99 2 HOH HOH 183 A HOH 100 2 HOH HOH 184 A HOH 101 2 HOH HOH 185 A HOH 104 2 HOH HOH 186 A HOH 105 2 HOH HOH 187 A HOH 109 2 HOH HOH 188 A HOH 110 2 HOH HOH 189 A HOH 114 2 HOH HOH 190 A HOH 115 2 HOH HOH 191 A HOH 116 2 HOH HOH 192 A HOH 119 2 HOH HOH 193 A HOH 120 2 HOH HOH 194 A HOH 122 2 HOH HOH 195 A HOH 123 2 HOH HOH 196 A HOH 124 2 HOH HOH 197 A HOH 126 2 HOH HOH 198 A HOH 129 2 HOH HOH 199 A HOH 130 2 HOH HOH 200 A HOH 131 2 HOH HOH 201 A HOH 132 2 HOH HOH 202 A HOH 134 2 HOH HOH 203 A HOH 135 2 HOH HOH 204 A HOH 136 2 HOH HOH 205 A HOH 137 2 HOH HOH 206 A HOH 138 2 HOH HOH 207 A HOH 140 2 HOH HOH 208 A HOH 141 2 HOH HOH 209 A HOH 142 2 HOH HOH 210 A HOH 143 2 HOH HOH 211 A HOH 144 2 HOH HOH 212 A HOH 147 2 HOH HOH 213 A HOH 148 2 HOH HOH 214 A HOH 150 2 HOH HOH 215 A HOH 151 2 HOH HOH 216 A HOH 153 2 HOH HOH 217 A HOH 154 2 HOH HOH 218 A HOH 155 2 HOH HOH 219 A HOH 157 2 HOH HOH 220 A HOH 158 2 HOH HOH 221 A HOH 159 2 HOH HOH 222 A HOH 160 2 HOH HOH 223 A HOH 163 2 HOH HOH 224 A HOH 164 2 HOH HOH 225 A HOH 165 2 HOH HOH 226 A HOH 167 2 HOH HOH 227 A HOH 168 2 HOH HOH 228 A HOH 169 2 HOH HOH 229 A HOH 170 2 HOH HOH 230 A HOH 171 2 HOH HOH 231 A HOH 5 2 HOH HOH 128 B HOH 7 2 HOH HOH 129 B HOH 24 2 HOH HOH 130 B HOH 28 2 HOH HOH 131 B HOH 32 2 HOH HOH 132 B HOH 36 2 HOH HOH 133 B HOH 38 2 HOH HOH 134 B HOH 47 2 HOH HOH 135 B HOH 48 2 HOH HOH 136 B HOH 49 2 HOH HOH 137 B HOH 52 2 HOH HOH 138 B HOH 54 2 HOH HOH 139 B HOH 55 2 HOH HOH 140 B HOH 56 2 HOH HOH 141 B HOH 57 2 HOH HOH 142 B HOH 58 2 HOH HOH 143 B HOH 59 2 HOH HOH 144 B HOH 70 2 HOH HOH 145 B HOH 72 2 HOH HOH 146 B HOH 75 2 HOH HOH 147 B HOH 77 2 HOH HOH 148 B HOH 82 2 HOH HOH 149 B HOH 89 2 HOH HOH 150 B HOH 90 2 HOH HOH 151 B HOH 95 2 HOH HOH 152 B HOH 96 2 HOH HOH 153 B HOH 97 2 HOH HOH 154 B HOH 98 2 HOH HOH 155 B HOH 102 2 HOH HOH 156 B HOH 103 2 HOH HOH 157 B HOH 106 2 HOH HOH 158 B HOH 107 2 HOH HOH 159 B HOH 108 2 HOH HOH 160 B HOH 111 2 HOH HOH 161 B HOH 112 2 HOH HOH 162 B HOH 113 2 HOH HOH 163 B HOH 117 2 HOH HOH 164 B HOH 118 2 HOH HOH 165 B HOH 121 2 HOH HOH 166 B HOH 125 2 HOH HOH 167 B HOH 127 2 HOH HOH 168 B HOH 128 2 HOH HOH 169 B HOH 133 2 HOH HOH 170 B HOH 139 2 HOH HOH 171 B HOH 145 2 HOH HOH 172 B HOH 146 2 HOH HOH 173 B HOH 149 2 HOH HOH 174 B HOH 152 2 HOH HOH 175 B HOH 156 2 HOH HOH 176 B HOH 161 2 HOH HOH 177 B HOH 162 2 HOH HOH 178 B HOH 166 2 HOH HOH 179 B HOH 172 2 HOH HOH 180 B n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A n 6 6 A n 7 7 A n 8 8 A n 9 9 A CYS 10 n 10 CYS 10 A PRO 11 n 11 PRO 11 A LEU 12 n 12 LEU 12 A MET 13 n 13 MET 13 A VAL 14 n 14 VAL 14 A LYS 15 n 15 LYS 15 A VAL 16 n 16 VAL 16 A LEU 17 n 17 LEU 17 A ASP 18 n 18 ASP 18 A ALA 19 n 19 ALA 19 A VAL 20 n 20 VAL 20 A ARG 21 n 21 ARG 21 A GLY 22 n 22 GLY 22 A SER 23 n 23 SER 23 A PRO 24 n 24 PRO 24 A ALA 25 n 25 ALA 25 A ILE 26 n 26 ILE 26 A ASN 27 n 27 ASN 27 A VAL 28 n 28 VAL 28 A ALA 29 n 29 ALA 29 A VAL 30 n 30 VAL 30 A HIS 31 n 31 HIS 31 A VAL 32 n 32 VAL 32 A PHE 33 n 33 PHE 33 A ARG 34 n 34 ARG 34 A LYS 35 n 35 LYS 35 A ALA 36 n 36 ALA 36 A ALA 37 n 37 ALA 37 A ASP 38 n 38 ASP 38 A ASP 39 n 39 ASP 39 A THR 40 n 40 THR 40 A TRP 41 n 41 TRP 41 A GLU 42 n 42 GLU 42 A PRO 43 n 43 PRO 43 A PHE 44 n 44 PHE 44 A ALA 45 n 45 ALA 45 A SER 46 n 46 SER 46 A GLY 47 n 47 GLY 47 A LYS 48 n 48 LYS 48 A THR 49 n 49 THR 49 A SER 50 n 50 SER 50 A GLU 51 n 51 GLU 51 A SER 52 n 52 SER 52 A GLY 53 n 53 GLY 53 A GLU 54 n 54 GLU 54 A LEU 55 n 55 LEU 55 A HIS 56 n 56 HIS 56 A GLY 57 n 57 GLY 57 A LEU 58 n 58 LEU 58 A THR 59 n 59 THR 59 A THR 60 n 60 THR 60 A ALA 61 n 61 GLU 61 A GLU 62 n 62 GLU 62 A GLU 63 n 63 GLU 63 A PHE 64 n 64 PHE 64 A VAL 65 n 65 VAL 65 A GLU 66 n 66 GLU 66 A GLY 67 n 67 GLY 67 A ILE 68 n 68 ILE 68 A TYR 69 n 69 TYR 69 A LYS 70 n 70 LYS 70 A VAL 71 n 71 VAL 71 A GLU 72 n 72 GLU 72 A ILE 73 n 73 ILE 73 A ASP 74 n 74 ASP 74 A THR 75 n 75 THR 75 A LYS 76 n 76 LYS 76 A SER 77 n 77 SER 77 A TYR 78 n 78 TYR 78 A TRP 79 n 79 TRP 79 A LYS 80 n 80 LYS 80 A ALA 81 n 81 ALA 81 A LEU 82 n 82 LEU 82 A GLY 83 n 83 GLY 83 A ILE 84 n 84 ILE 84 A SER 85 n 85 SER 85 A PRO 86 n 86 PRO 86 A PHE 87 n 87 PHE 87 A HIS 88 n 88 HIS 88 A GLU 89 n 89 GLU 89 A HIS 90 n 90 HIS 90 A ALA 91 n 91 ALA 91 A GLU 92 n 92 GLU 92 A VAL 93 n 93 VAL 93 A VAL 94 n 94 VAL 94 A PHE 95 n 95 PHE 95 A THR 96 n 96 THR 96 A ALA 97 n 97 ALA 97 A ASN 98 n 98 ASN 98 A ASP 99 n 99 ASP 99 A SER 100 n 100 SER 100 A GLY 101 n 101 GLY 101 A PRO 102 n 102 PRO 102 A ARG 103 n 103 ARG 103 A ARG 104 n 104 ARG 104 A TYR 105 n 105 TYR 105 A THR 106 n 106 THR 106 A ILE 107 n 107 ILE 107 A ALA 108 n 108 ALA 108 A ALA 109 n 109 ALA 109 A LEU 110 n 110 LEU 110 A LEU 111 n 111 LEU 111 A SER 112 n 112 SER 112 A PRO 113 n 113 PRO 113 A TYR 114 n 114 TYR 114 A SER 115 n 115 SER 115 A TYR 116 n 116 TYR 116 A SER 117 n 117 SER 117 A THR 118 n 118 THR 118 A THR 119 n 119 THR 119 A ALA 120 n 120 ALA 120 A VAL 121 n 121 VAL 121 A VAL 122 n 122 VAL 122 A THR 123 n 123 THR 123 A ASN 124 n 124 ASN 124 A n 125 125 A n 126 126 A n 127 127 A n 1 1 B n 2 2 B n 3 3 B n 4 4 B n 5 5 B n 6 6 B n 7 7 B n 8 8 B n 9 9 B CYS 10 n 10 CYS 10 B PRO 11 n 11 PRO 11 B LEU 12 n 12 LEU 12 B MET 13 n 13 MET 13 B VAL 14 n 14 VAL 14 B LYS 15 n 15 LYS 15 B VAL 16 n 16 VAL 16 B LEU 17 n 17 LEU 17 B ASP 18 n 18 ASP 18 B ALA 19 n 19 ALA 19 B VAL 20 n 20 VAL 20 B ARG 21 n 21 ARG 21 B GLY 22 n 22 GLY 22 B SER 23 n 23 SER 23 B PRO 24 n 24 PRO 24 B ALA 25 n 25 ALA 25 B ILE 26 n 26 ILE 26 B ASN 27 n 27 ASN 27 B VAL 28 n 28 VAL 28 B ALA 29 n 29 ALA 29 B VAL 30 n 30 VAL 30 B HIS 31 n 31 HIS 31 B VAL 32 n 32 VAL 32 B PHE 33 n 33 PHE 33 B ARG 34 n 34 ARG 34 B LYS 35 n 35 LYS 35 B ALA 36 n 36 ALA 36 B ALA 37 n 37 ALA 37 B GLY 38 n 38 ASP 38 B GLY 39 n 39 ASP 39 B ALA 40 n 40 THR 40 B TRP 41 n 41 TRP 41 B GLU 42 n 42 GLU 42 B PRO 43 n 43 PRO 43 B PHE 44 n 44 PHE 44 B ALA 45 n 45 ALA 45 B SER 46 n 46 SER 46 B GLY 47 n 47 GLY 47 B LYS 48 n 48 LYS 48 B THR 49 n 49 THR 49 B SER 50 n 50 SER 50 B GLU 51 n 51 GLU 51 B SER 52 n 52 SER 52 B GLY 53 n 53 GLY 53 B GLU 54 n 54 GLU 54 B LEU 55 n 55 LEU 55 B HIS 56 n 56 HIS 56 B GLY 57 n 57 GLY 57 B LEU 58 n 58 LEU 58 B THR 59 n 59 THR 59 B THR 60 n 60 THR 60 B GLU 61 n 61 GLU 61 B GLU 62 n 62 GLU 62 B GLU 63 n 63 GLU 63 B PHE 64 n 64 PHE 64 B VAL 65 n 65 VAL 65 B GLU 66 n 66 GLU 66 B GLY 67 n 67 GLY 67 B ILE 68 n 68 ILE 68 B TYR 69 n 69 TYR 69 B LYS 70 n 70 LYS 70 B VAL 71 n 71 VAL 71 B GLU 72 n 72 GLU 72 B ILE 73 n 73 ILE 73 B ASP 74 n 74 ASP 74 B THR 75 n 75 THR 75 B LYS 76 n 76 LYS 76 B SER 77 n 77 SER 77 B TYR 78 n 78 TYR 78 B TRP 79 n 79 TRP 79 B GLY 80 n 80 LYS 80 B ALA 81 n 81 ALA 81 B LEU 82 n 82 LEU 82 B GLY 83 n 83 GLY 83 B ILE 84 n 84 ILE 84 B SER 85 n 85 SER 85 B GLY 86 n 86 PRO 86 B PHE 87 n 87 PHE 87 B HIS 88 n 88 HIS 88 B GLU 89 n 89 GLU 89 B HIS 90 n 90 HIS 90 B ALA 91 n 91 ALA 91 B GLU 92 n 92 GLU 92 B VAL 93 n 93 VAL 93 B VAL 94 n 94 VAL 94 B PHE 95 n 95 PHE 95 B THR 96 n 96 THR 96 B ALA 97 n 97 ALA 97 B ASN 98 n 98 ASN 98 B ASP 99 n 99 ASP 99 B SER 100 n 100 SER 100 B GLY 101 n 101 GLY 101 B PRO 102 n 102 PRO 102 B ARG 103 n 103 ARG 103 B ALA 104 n 104 ARG 104 B TYR 105 n 105 TYR 105 B THR 106 n 106 THR 106 B ILE 107 n 107 ILE 107 B ALA 108 n 108 ALA 108 B ALA 109 n 109 ALA 109 B LEU 110 n 110 LEU 110 B LEU 111 n 111 LEU 111 B SER 112 n 112 SER 112 B PRO 113 n 113 PRO 113 B TYR 114 n 114 TYR 114 B SER 115 n 115 SER 115 B TYR 116 n 116 TYR 116 B SER 117 n 117 SER 117 B THR 118 n 118 THR 118 B THR 119 n 119 THR 119 B ALA 120 n 120 ALA 120 B VAL 121 n 121 VAL 121 B VAL 122 n 122 VAL 122 B THR 123 n 123 THR 123 B ASN 124 n 124 ASN 124 B n 125 125 B n 126 126 B n 127 127 B author_and_software_defined_assembly PISA 4 tetrameric 5840 -36 19060 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_755 -x+2,-y,z crystal symmetry operation 86.4480000000 0.0000000000 0.0000000000 A O SER 23 A O SER 23 A N ASP 18 A N ASP 18 A N LYS 15 A N LYS 15 A O ALA 109 A O ALA 109 A N THR 106 A N THR 106 A O VAL 121 A O VAL 121 A N TYR 116 A N TYR 116 B O THR 118 B O THR 118 B O SER 117 B O SER 117 B N LEU 110 B N LEU 110 B O LEU 111 B O LEU 111 B N LEU 17 B N LEU 17 B N ASP 18 B N ASP 18 B O SER 23 B O SER 23 A O LEU 55 A O LEU 55 A N VAL 14 A N VAL 14 A N LYS 15 A N LYS 15 A O ALA 109 A O ALA 109 A N THR 106 A N THR 106 A O VAL 121 A O VAL 121 A N TYR 116 A N TYR 116 B O THR 118 B O THR 118 B O SER 117 B O SER 117 B N LEU 110 B N LEU 110 B O LEU 111 B O LEU 111 B N LEU 17 B N LEU 17 B N VAL 14 B N VAL 14 B O LEU 55 B O LEU 55 A O ALA 45 A O ALA 45 A N VAL 32 A N VAL 32 A N HIS 31 A N HIS 31 A O GLU 72 A O GLU 72 A N ILE 73 A N ILE 73 A O ALA 91 A O ALA 91 A N VAL 94 A N VAL 94 B O HIS 90 B O HIS 90 B O PHE 95 B O PHE 95 B N TYR 69 B N TYR 69 B O GLU 72 B O GLU 72 B N HIS 31 B N HIS 31 B N VAL 32 B N VAL 32 B O ALA 45 B O ALA 45 1 A HOH 135 C HOH 1 A HOH 179 C HOH 1 B HOH 144 D HOH 1 B HOH 165 D HOH 1 B HOH 176 D HOH 1 A CG GLU 61 A CG GLU 61 1 Y 1 A CD GLU 61 A CD GLU 61 1 Y 1 A OE1 GLU 61 A OE1 GLU 61 1 Y 1 A OE2 GLU 61 A OE2 GLU 61 1 Y 1 B CB ASP 38 B CB ASP 38 1 Y 1 B CG ASP 38 B CG ASP 38 1 Y 1 B OD1 ASP 38 B OD1 ASP 38 1 Y 1 B OD2 ASP 38 B OD2 ASP 38 1 Y 1 B CB ASP 39 B CB ASP 39 1 Y 1 B CG ASP 39 B CG ASP 39 1 Y 1 B OD1 ASP 39 B OD1 ASP 39 1 Y 1 B OD2 ASP 39 B OD2 ASP 39 1 Y 1 B OG1 THR 40 B OG1 THR 40 1 Y 1 B CG2 THR 40 B CG2 THR 40 1 Y 1 B CB LYS 80 B CB LYS 80 1 Y 1 B CG LYS 80 B CG LYS 80 1 Y 1 B CD LYS 80 B CD LYS 80 1 Y 1 B CE LYS 80 B CE LYS 80 1 Y 1 B NZ LYS 80 B NZ LYS 80 1 Y 1 B CB PRO 86 B CB PRO 86 1 Y 1 B CG PRO 86 B CG PRO 86 1 Y 1 B CD PRO 86 B CD PRO 86 1 Y 1 B CG ARG 104 B CG ARG 104 1 Y 1 B CD ARG 104 B CD ARG 104 1 Y 1 B NE ARG 104 B NE ARG 104 1 Y 1 B CZ ARG 104 B CZ ARG 104 1 Y 1 B NH1 ARG 104 B NH1 ARG 104 1 Y 1 B NH2 ARG 104 B NH2 ARG 104 1 Y 1 A GLY 1 A GLY 1 1 Y 1 A PRO 2 A PRO 2 1 Y 1 A THR 3 A THR 3 1 Y 1 A GLY 4 A GLY 4 1 Y 1 A THR 5 A THR 5 1 Y 1 A GLY 6 A GLY 6 1 Y 1 A GLU 7 A GLU 7 1 Y 1 A SER 8 A SER 8 1 Y 1 A LYS 9 A LYS 9 1 Y 1 A PRO 125 A PRO 125 1 Y 1 A LYS 126 A LYS 126 1 Y 1 A GLU 127 A GLU 127 1 Y 1 B GLY 1 B GLY 1 1 Y 1 B PRO 2 B PRO 2 1 Y 1 B THR 3 B THR 3 1 Y 1 B GLY 4 B GLY 4 1 Y 1 B THR 5 B THR 5 1 Y 1 B GLY 6 B GLY 6 1 Y 1 B GLU 7 B GLU 7 1 Y 1 B SER 8 B SER 8 1 Y 1 B LYS 9 B LYS 9 1 Y 1 B PRO 125 B PRO 125 1 Y 1 B LYS 126 B LYS 126 1 Y 1 B GLU 127 B GLU 127 1 Y 1 B B SER PRO 85 86 -95.60 1 B B PRO PHE 86 87 102.49 1 -25.66 2.60 112.10 86.44 B B B N CA C PRO PRO PRO 86 86 86 N 1 B ASP 38 102.28 33.82 1 B ASP 39 14.90 39.48 1 B PRO 86 -155.01 81.36 1 B PHE 87 0.15 74.67 24.270 -0.19 0.00 0.00 -0.04 0.00 0.23 0.945 0.928 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.24943 0.22129 0.22276 0.22276 1.72 22.19 1290 25276 25276 5.1 99.68 2.613 0.087 RANDOM 1 THROUGHOUT 0 0 MOLECULAR REPLACEMENT 0.133 0.123 0.80 0.80 1.20 1BMZ MAXIMUM LIKELIHOOD BABINET MODEL WITH MASK 1.72 22.19 157 1911 0 0 1754 0.008 0.022 1799 0.002 0.020 1165 1.353 1.939 2454 0.854 3.000 2849 11.003 5.000 228 28.224 23.611 72 13.350 15.000 270 15.869 15.000 7 0.095 0.200 281 0.004 0.020 2012 0.001 0.020 371 0.179 0.200 272 0.194 0.200 1110 0.174 0.200 860 0.084 0.200 956 0.097 0.200 103 0.212 0.200 13 0.242 0.200 38 0.114 0.200 8 1.094 1.500 1456 0.147 1.500 465 1.198 2.000 1845 1.780 3.000 787 2.680 4.500 609 0.353 0.276 1.764 86 1699 20 97.12 1.72 22.19 3D7P 25276 25276 0 0 1 99.68 1.72 1.76 97.10 refinement REFMAC 5.2.0019 data collection CrystalClear data reduction DENZO data scaling SCALEPACK phasing EPMR Crystal structure of human Transthyretin (TTR) at pH 4.0 1 N N 1 N N 2 N N 2 N N A ASP 74 A ASP 74 HELX_P A LEU 82 A LEU 82 1 1 9 B THR 75 B THR 75 HELX_P B GLY 83 B GLY 83 1 2 9 TRANSPORT PROTEIN wt-TTR, AMYLOID, TRANSTHYRETIN, ACIDIC PH, native TTR, and crystal structure, Disease mutation, Gamma-carboxyglutamic acid, Glycoprotein, Hormone, Polymorphism, Polyneuropathy, Retinol-binding, Secreted, Thyroid hormone, Transport, Vitamin A, TRANSPORT PROTEIN TTHY_HUMAN UNP 1 21 P02766 GPTGTGESKCPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSYWK ALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYSTTAVVTNPKE 21 147 3D7P 1 127 P02766 A 1 1 127 21 147 3D7P 1 127 P02766 B 1 1 127 8 8 8 anti-parallel parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A SER 23 A SER 23 A PRO 24 A PRO 24 A LEU 12 A LEU 12 A ASP 18 A ASP 18 A ARG 104 A ARG 104 A SER 112 A SER 112 A SER 115 A SER 115 A THR 123 A THR 123 B SER 115 B SER 115 B THR 123 B THR 123 B ARG 104 B ARG 104 B SER 112 B SER 112 B LEU 12 B LEU 12 B ASP 18 B ASP 18 B SER 23 B SER 23 B PRO 24 B PRO 24 A GLU 54 A GLU 54 A LEU 55 A LEU 55 A LEU 12 A LEU 12 A ASP 18 A ASP 18 A ARG 104 A ARG 104 A SER 112 A SER 112 A SER 115 A SER 115 A THR 123 A THR 123 B SER 115 B SER 115 B THR 123 B THR 123 B ARG 104 B ARG 104 B SER 112 B SER 112 B LEU 12 B LEU 12 B ASP 18 B ASP 18 B GLU 54 B GLU 54 B LEU 55 B LEU 55 A TRP 41 A TRP 41 A LYS 48 A LYS 48 A ALA 29 A ALA 29 A LYS 35 A LYS 35 A GLY 67 A GLY 67 A ILE 73 A ILE 73 A HIS 88 A HIS 88 A ALA 97 A ALA 97 B HIS 90 B HIS 90 B ALA 97 B ALA 97 B GLY 67 B GLY 67 B ASP 74 B ASP 74 B ALA 29 B ALA 29 B LYS 35 B LYS 35 B TRP 41 B TRP 41 B LYS 48 B LYS 48 18 P 21 21 2