0.013448
0.000000
0.000000
0.000000
0.013448
0.000000
0.000000
0.000000
0.003472
0.00000
0.00000
0.00000
Campagnola, G.
Weygandt, M.H.
Scoggin, K.E.
Peersen, O.B.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.000
90.000
90.000
74.360
74.360
288.050
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Na 1
22.990
SODIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
NA
N
251
N
N
N
252
S
C
N
253
N
C
N
254
N
O
N
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
Y
261
N
C
N
262
N
O
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
N
N
275
S
C
N
276
N
C
N
277
N
O
N
278
N
C
N
279
N
C
N
280
N
C
N
281
N
O
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
N
N
292
S
C
N
293
N
C
N
294
N
O
N
295
N
C
N
296
N
O
N
297
N
O
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
S
N
306
N
O
N
307
N
O
N
308
N
O
N
309
N
O
N
310
N
N
N
311
S
C
N
312
N
C
N
313
N
O
N
314
R
C
N
315
N
O
N
316
N
C
N
317
N
O
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
N
N
328
S
C
N
329
N
C
N
330
N
O
N
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
Y
335
N
N
Y
336
N
C
Y
337
N
C
Y
338
N
C
Y
339
N
C
Y
340
N
C
N
341
N
O
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
N
N
355
S
C
N
356
N
C
N
357
N
O
N
358
N
C
Y
359
N
C
Y
360
N
C
Y
361
N
C
Y
362
N
C
Y
363
N
C
Y
364
N
C
N
365
N
O
N
366
N
O
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
N
N
379
S
C
N
380
N
C
N
381
N
O
N
382
N
C
N
383
N
C
N
384
N
C
N
385
N
O
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
doub
N
291
N
doub
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
doub
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
doub
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
doub
Y
326
N
sing
Y
327
N
sing
N
328
N
sing
Y
329
N
sing
Y
330
N
doub
N
331
N
sing
Y
332
N
doub
N
333
N
sing
Y
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
doub
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
Y
349
N
doub
Y
350
N
sing
Y
351
N
sing
N
352
N
sing
Y
353
N
doub
N
354
N
sing
Y
355
N
doub
N
356
N
sing
Y
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
doub
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
US
J.Virol.
JOVIAM
0825
0022-538X
82
9458
9464
10.1128/JVI.00647-08
18632862
Crystal Structure of Coxsackievirus B3 3Dpol Highlights Functional Importance of Residue 5 in Picornaviral Polymerases
2008
10.2210/pdb3ddk/pdb
pdb_00003ddk
173
1
CCD
2006-01-13
NOIR-1
SINGLE WAVELENGTH
M
x-ray
1
1.00
1.0
4.2.2
ALS
1.00
SYNCHROTRON
ALS BEAMLINE 4.2.2
52477.047
RNA polymerase B3 3Dpol
1
man
polymer
22.990
SODIUM ION
9
syn
non-polymer
96.063
SULFATE ION
6
syn
non-polymer
18.015
water
262
nat
water
no
no
GEIEFIESSKDAGFPVINTPSKTKLEPSVFHQVFEGNKEPAVLRSGDPRLKANFEEAIFSKYIGNVNTHVDEYMLEAVDH
YAGQLATLDISTEPMKLEDAVYGTEGLEALDLTTSAGYPYVALGIKKRDILSKKTKDLTKLKECMDKYGLNLPMVTYVKD
ELRSIEKVAKGKSRLIEASSLNDSVAMRQTFGNLYKTFHLNPGVVTGSAVGCDPDLFWSKIPVMLDGHLIAFDYSGYDAS
LSPVWFACLKMILEKLGYTHKETNYIDYLCNSHHLYRDKHYFVRGGMPSGCSGTSIFNSMINNIIIRTLMLKVYKGIDLD
QFRMIAYGDDVIASYPWPIDASLLAEAGKGYGLIMTPADKGECFNEVTWTNVTFLKRYFRADEQYPFLVHPVMPMKDIHE
SIRWTKDPKNTQDHVRSLCLLAWHNGEHEYEEFIRKIRSVPVGRCLTLPAFSTLRRKWLDSF
GEIEFIESSKDAGFPVINTPSKTKLEPSVFHQVFEGNKEPAVLRSGDPRLKANFEEAIFSKYIGNVNTHVDEYMLEAVDH
YAGQLATLDISTEPMKLEDAVYGTEGLEALDLTTSAGYPYVALGIKKRDILSKKTKDLTKLKECMDKYGLNLPMVTYVKD
ELRSIEKVAKGKSRLIEASSLNDSVAMRQTFGNLYKTFHLNPGVVTGSAVGCDPDLFWSKIPVMLDGHLIAFDYSGYDAS
LSPVWFACLKMILEKLGYTHKETNYIDYLCNSHHLYRDKHYFVRGGMPSGCSGTSIFNSMINNIIIRTLMLKVYKGIDLD
QFRMIAYGDDVIASYPWPIDASLLAEAGKGYGLIMTPADKGECFNEVTWTNVTFLKRYFRADEQYPFLVHPVMPMKDIHE
SIRWTKDPKNTQDHVRSLCLLAWHNGEHEYEEFIRKIRSVPVGRCLTLPAFSTLRRKWLDSF
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
B3
sample
3Dpol
12072
Human coxsackievirus
562
Escherichia coli
BL21(DE3) pLysS
plasmid
pKKT7E
1
3.79
67.58
VAPOR DIFFUSION, HANGING DROP
5.5
1.5M ammonium sulfate, 25% glycerol, 200 mM NaCl (unbuffered), pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 289K
289
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Source and taxonomy
Version format compliance
Refinement description
Data collection
Database references
Derived calculations
Refinement description
1
0
2008-09-23
1
1
2011-07-13
1
2
2017-10-25
1
3
2023-08-30
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
N
RCSB
Y
RCSB
2008-06-05
REL
REL
NA
SODIUM ION
SO4
SULFATE ION
HOH
water
1RA6
1RA6 - poliovirus polymerase
PDB
experimental model
NA
901
2
NA
NA
901
A
NA
905
2
NA
NA
905
A
NA
906
2
NA
NA
906
A
NA
907
2
NA
NA
907
A
NA
910
2
NA
NA
910
A
NA
912
2
NA
NA
912
A
NA
913
2
NA
NA
913
A
NA
916
2
NA
NA
916
A
NA
918
2
NA
NA
918
A
SO4
919
3
SO4
SO4
919
A
SO4
920
3
SO4
SO4
920
A
SO4
921
3
SO4
SO4
921
A
SO4
922
3
SO4
SO4
922
A
SO4
923
3
SO4
SO4
923
A
SO4
924
3
SO4
SO4
924
A
HOH
501
4
HOH
HOH
501
A
HOH
502
4
HOH
HOH
502
A
HOH
503
4
HOH
HOH
503
A
HOH
504
4
HOH
HOH
504
A
HOH
505
4
HOH
HOH
505
A
HOH
506
4
HOH
HOH
506
A
HOH
507
4
HOH
HOH
507
A
HOH
508
4
HOH
HOH
508
A
HOH
509
4
HOH
HOH
509
A
HOH
510
4
HOH
HOH
510
A
HOH
511
4
HOH
HOH
511
A
HOH
512
4
HOH
HOH
512
A
HOH
513
4
HOH
HOH
513
A
HOH
514
4
HOH
HOH
514
A
HOH
515
4
HOH
HOH
515
A
HOH
516
4
HOH
HOH
516
A
HOH
517
4
HOH
HOH
517
A
HOH
518
4
HOH
HOH
518
A
HOH
519
4
HOH
HOH
519
A
HOH
520
4
HOH
HOH
520
A
HOH
521
4
HOH
HOH
521
A
HOH
522
4
HOH
HOH
522
A
HOH
523
4
HOH
HOH
523
A
HOH
524
4
HOH
HOH
524
A
HOH
525
4
HOH
HOH
525
A
HOH
526
4
HOH
HOH
526
A
HOH
527
4
HOH
HOH
527
A
HOH
528
4
HOH
HOH
528
A
HOH
529
4
HOH
HOH
529
A
HOH
530
4
HOH
HOH
530
A
HOH
531
4
HOH
HOH
531
A
HOH
532
4
HOH
HOH
532
A
HOH
533
4
HOH
HOH
533
A
HOH
534
4
HOH
HOH
534
A
HOH
535
4
HOH
HOH
535
A
HOH
537
4
HOH
HOH
537
A
HOH
538
4
HOH
HOH
538
A
HOH
539
4
HOH
HOH
539
A
HOH
540
4
HOH
HOH
540
A
HOH
541
4
HOH
HOH
541
A
HOH
542
4
HOH
HOH
542
A
HOH
543
4
HOH
HOH
543
A
HOH
544
4
HOH
HOH
544
A
HOH
546
4
HOH
HOH
546
A
HOH
548
4
HOH
HOH
548
A
HOH
549
4
HOH
HOH
549
A
HOH
550
4
HOH
HOH
550
A
HOH
551
4
HOH
HOH
551
A
HOH
554
4
HOH
HOH
554
A
HOH
555
4
HOH
HOH
555
A
HOH
556
4
HOH
HOH
556
A
HOH
557
4
HOH
HOH
557
A
HOH
558
4
HOH
HOH
558
A
HOH
559
4
HOH
HOH
559
A
HOH
560
4
HOH
HOH
560
A
HOH
561
4
HOH
HOH
561
A
HOH
562
4
HOH
HOH
562
A
HOH
563
4
HOH
HOH
563
A
HOH
564
4
HOH
HOH
564
A
HOH
565
4
HOH
HOH
565
A
HOH
566
4
HOH
HOH
566
A
HOH
567
4
HOH
HOH
567
A
HOH
568
4
HOH
HOH
568
A
HOH
570
4
HOH
HOH
570
A
HOH
571
4
HOH
HOH
571
A
HOH
572
4
HOH
HOH
572
A
HOH
573
4
HOH
HOH
573
A
HOH
575
4
HOH
HOH
575
A
HOH
576
4
HOH
HOH
576
A
HOH
577
4
HOH
HOH
577
A
HOH
578
4
HOH
HOH
578
A
HOH
579
4
HOH
HOH
579
A
HOH
580
4
HOH
HOH
580
A
HOH
583
4
HOH
HOH
583
A
HOH
584
4
HOH
HOH
584
A
HOH
585
4
HOH
HOH
585
A
HOH
586
4
HOH
HOH
586
A
HOH
587
4
HOH
HOH
587
A
HOH
589
4
HOH
HOH
589
A
HOH
590
4
HOH
HOH
590
A
HOH
591
4
HOH
HOH
591
A
HOH
592
4
HOH
HOH
592
A
HOH
593
4
HOH
HOH
593
A
HOH
594
4
HOH
HOH
594
A
HOH
595
4
HOH
HOH
595
A
HOH
596
4
HOH
HOH
596
A
HOH
597
4
HOH
HOH
597
A
HOH
598
4
HOH
HOH
598
A
HOH
599
4
HOH
HOH
599
A
HOH
600
4
HOH
HOH
600
A
HOH
601
4
HOH
HOH
601
A
HOH
602
4
HOH
HOH
602
A
HOH
603
4
HOH
HOH
603
A
HOH
604
4
HOH
HOH
604
A
HOH
605
4
HOH
HOH
605
A
HOH
607
4
HOH
HOH
607
A
HOH
608
4
HOH
HOH
608
A
HOH
609
4
HOH
HOH
609
A
HOH
610
4
HOH
HOH
610
A
HOH
611
4
HOH
HOH
611
A
HOH
612
4
HOH
HOH
612
A
HOH
613
4
HOH
HOH
613
A
HOH
614
4
HOH
HOH
614
A
HOH
615
4
HOH
HOH
615
A
HOH
616
4
HOH
HOH
616
A
HOH
617
4
HOH
HOH
617
A
HOH
618
4
HOH
HOH
618
A
HOH
619
4
HOH
HOH
619
A
HOH
620
4
HOH
HOH
620
A
HOH
621
4
HOH
HOH
621
A
HOH
622
4
HOH
HOH
622
A
HOH
623
4
HOH
HOH
623
A
HOH
624
4
HOH
HOH
624
A
HOH
625
4
HOH
HOH
625
A
HOH
627
4
HOH
HOH
627
A
HOH
628
4
HOH
HOH
628
A
HOH
630
4
HOH
HOH
630
A
HOH
631
4
HOH
HOH
631
A
HOH
632
4
HOH
HOH
632
A
HOH
635
4
HOH
HOH
635
A
HOH
636
4
HOH
HOH
636
A
HOH
637
4
HOH
HOH
637
A
HOH
638
4
HOH
HOH
638
A
HOH
641
4
HOH
HOH
641
A
HOH
642
4
HOH
HOH
642
A
HOH
643
4
HOH
HOH
643
A
HOH
644
4
HOH
HOH
644
A
HOH
645
4
HOH
HOH
645
A
HOH
646
4
HOH
HOH
646
A
HOH
648
4
HOH
HOH
648
A
HOH
649
4
HOH
HOH
649
A
HOH
650
4
HOH
HOH
650
A
HOH
651
4
HOH
HOH
651
A
HOH
652
4
HOH
HOH
652
A
HOH
653
4
HOH
HOH
653
A
HOH
654
4
HOH
HOH
654
A
HOH
655
4
HOH
HOH
655
A
HOH
656
4
HOH
HOH
656
A
HOH
657
4
HOH
HOH
657
A
HOH
658
4
HOH
HOH
658
A
HOH
659
4
HOH
HOH
659
A
HOH
660
4
HOH
HOH
660
A
HOH
661
4
HOH
HOH
661
A
HOH
662
4
HOH
HOH
662
A
HOH
663
4
HOH
HOH
663
A
HOH
664
4
HOH
HOH
664
A
HOH
665
4
HOH
HOH
665
A
HOH
667
4
HOH
HOH
667
A
HOH
668
4
HOH
HOH
668
A
HOH
669
4
HOH
HOH
669
A
HOH
670
4
HOH
HOH
670
A
HOH
671
4
HOH
HOH
671
A
HOH
672
4
HOH
HOH
672
A
HOH
673
4
HOH
HOH
673
A
HOH
674
4
HOH
HOH
674
A
HOH
675
4
HOH
HOH
675
A
HOH
676
4
HOH
HOH
676
A
HOH
677
4
HOH
HOH
677
A
HOH
678
4
HOH
HOH
678
A
HOH
679
4
HOH
HOH
679
A
HOH
680
4
HOH
HOH
680
A
HOH
681
4
HOH
HOH
681
A
HOH
682
4
HOH
HOH
682
A
HOH
683
4
HOH
HOH
683
A
HOH
684
4
HOH
HOH
684
A
HOH
685
4
HOH
HOH
685
A
HOH
686
4
HOH
HOH
686
A
HOH
687
4
HOH
HOH
687
A
HOH
688
4
HOH
HOH
688
A
HOH
689
4
HOH
HOH
689
A
HOH
691
4
HOH
HOH
691
A
HOH
692
4
HOH
HOH
692
A
HOH
693
4
HOH
HOH
693
A
HOH
694
4
HOH
HOH
694
A
HOH
695
4
HOH
HOH
695
A
HOH
696
4
HOH
HOH
696
A
HOH
697
4
HOH
HOH
697
A
HOH
698
4
HOH
HOH
698
A
HOH
699
4
HOH
HOH
699
A
HOH
700
4
HOH
HOH
700
A
HOH
701
4
HOH
HOH
701
A
HOH
702
4
HOH
HOH
702
A
HOH
703
4
HOH
HOH
703
A
HOH
704
4
HOH
HOH
704
A
HOH
705
4
HOH
HOH
705
A
HOH
706
4
HOH
HOH
706
A
HOH
707
4
HOH
HOH
707
A
HOH
708
4
HOH
HOH
708
A
HOH
709
4
HOH
HOH
709
A
HOH
710
4
HOH
HOH
710
A
HOH
711
4
HOH
HOH
711
A
HOH
712
4
HOH
HOH
712
A
HOH
713
4
HOH
HOH
713
A
HOH
714
4
HOH
HOH
714
A
HOH
715
4
HOH
HOH
715
A
HOH
716
4
HOH
HOH
716
A
HOH
717
4
HOH
HOH
717
A
HOH
718
4
HOH
HOH
718
A
HOH
719
4
HOH
HOH
719
A
HOH
720
4
HOH
HOH
720
A
HOH
721
4
HOH
HOH
721
A
HOH
722
4
HOH
HOH
722
A
HOH
723
4
HOH
HOH
723
A
HOH
724
4
HOH
HOH
724
A
HOH
725
4
HOH
HOH
725
A
HOH
726
4
HOH
HOH
726
A
HOH
727
4
HOH
HOH
727
A
HOH
728
4
HOH
HOH
728
A
HOH
729
4
HOH
HOH
729
A
HOH
732
4
HOH
HOH
732
A
HOH
733
4
HOH
HOH
733
A
HOH
734
4
HOH
HOH
734
A
HOH
736
4
HOH
HOH
736
A
HOH
737
4
HOH
HOH
737
A
HOH
738
4
HOH
HOH
738
A
HOH
739
4
HOH
HOH
739
A
HOH
740
4
HOH
HOH
740
A
HOH
741
4
HOH
HOH
741
A
HOH
742
4
HOH
HOH
742
A
HOH
743
4
HOH
HOH
743
A
HOH
744
4
HOH
HOH
744
A
HOH
745
4
HOH
HOH
745
A
HOH
746
4
HOH
HOH
746
A
HOH
747
4
HOH
HOH
747
A
HOH
748
4
HOH
HOH
748
A
HOH
749
4
HOH
HOH
749
A
HOH
750
4
HOH
HOH
750
A
HOH
751
4
HOH
HOH
751
A
HOH
752
4
HOH
HOH
752
A
HOH
753
4
HOH
HOH
753
A
HOH
754
4
HOH
HOH
754
A
HOH
756
4
HOH
HOH
756
A
HOH
757
4
HOH
HOH
757
A
HOH
758
4
HOH
HOH
758
A
HOH
759
4
HOH
HOH
759
A
HOH
760
4
HOH
HOH
760
A
HOH
761
4
HOH
HOH
761
A
HOH
764
4
HOH
HOH
764
A
HOH
765
4
HOH
HOH
765
A
HOH
766
4
HOH
HOH
766
A
HOH
767
4
HOH
HOH
767
A
HOH
768
4
HOH
HOH
768
A
HOH
769
4
HOH
HOH
769
A
HOH
770
4
HOH
HOH
770
A
HOH
771
4
HOH
HOH
771
A
HOH
772
4
HOH
HOH
772
A
HOH
773
4
HOH
HOH
773
A
HOH
774
4
HOH
HOH
774
A
HOH
775
4
HOH
HOH
775
A
HOH
779
4
HOH
HOH
779
A
HOH
780
4
HOH
HOH
780
A
HOH
781
4
HOH
HOH
781
A
HOH
782
4
HOH
HOH
782
A
HOH
783
4
HOH
HOH
783
A
HOH
784
4
HOH
HOH
784
A
HOH
785
4
HOH
HOH
785
A
HOH
786
4
HOH
HOH
786
A
HOH
787
4
HOH
HOH
787
A
HOH
788
4
HOH
HOH
788
A
HOH
789
4
HOH
HOH
789
A
HOH
790
4
HOH
HOH
790
A
HOH
791
4
HOH
HOH
791
A
GLY
1
n
1
GLY
1
A
GLU
2
n
2
GLU
2
A
ILE
3
n
3
ILE
3
A
GLU
4
n
4
GLU
4
A
PHE
5
n
5
PHE
5
A
ILE
6
n
6
ILE
6
A
GLU
7
n
7
GLU
7
A
SER
8
n
8
SER
8
A
SER
9
n
9
SER
9
A
LYS
10
n
10
LYS
10
A
ASP
11
n
11
ASP
11
A
ALA
12
n
12
ALA
12
A
GLY
13
n
13
GLY
13
A
PHE
14
n
14
PHE
14
A
PRO
15
n
15
PRO
15
A
VAL
16
n
16
VAL
16
A
ILE
17
n
17
ILE
17
A
ASN
18
n
18
ASN
18
A
THR
19
n
19
THR
19
A
PRO
20
n
20
PRO
20
A
SER
21
n
21
SER
21
A
LYS
22
n
22
LYS
22
A
THR
23
n
23
THR
23
A
LYS
24
n
24
LYS
24
A
LEU
25
n
25
LEU
25
A
GLU
26
n
26
GLU
26
A
PRO
27
n
27
PRO
27
A
SER
28
n
28
SER
28
A
VAL
29
n
29
VAL
29
A
PHE
30
n
30
PHE
30
A
HIS
31
n
31
HIS
31
A
GLN
32
n
32
GLN
32
A
VAL
33
n
33
VAL
33
A
PHE
34
n
34
PHE
34
A
GLU
35
n
35
GLU
35
A
GLY
36
n
36
GLY
36
A
ASN
37
n
37
ASN
37
A
LYS
38
n
38
LYS
38
A
GLU
39
n
39
GLU
39
A
PRO
40
n
40
PRO
40
A
ALA
41
n
41
ALA
41
A
VAL
42
n
42
VAL
42
A
LEU
43
n
43
LEU
43
A
ARG
44
n
44
ARG
44
A
SER
45
n
45
SER
45
A
GLY
46
n
46
GLY
46
A
ASP
47
n
47
ASP
47
A
PRO
48
n
48
PRO
48
A
ARG
49
n
49
ARG
49
A
LEU
50
n
50
LEU
50
A
LYS
51
n
51
LYS
51
A
ALA
52
n
52
ALA
52
A
ASN
53
n
53
ASN
53
A
PHE
54
n
54
PHE
54
A
GLU
55
n
55
GLU
55
A
GLU
56
n
56
GLU
56
A
ALA
57
n
57
ALA
57
A
ILE
58
n
58
ILE
58
A
PHE
59
n
59
PHE
59
A
SER
60
n
60
SER
60
A
LYS
61
n
61
LYS
61
A
TYR
62
n
62
TYR
62
A
ILE
63
n
63
ILE
63
A
GLY
64
n
64
GLY
64
A
ASN
65
n
65
ASN
65
A
VAL
66
n
66
VAL
66
A
ASN
67
n
67
ASN
67
A
THR
68
n
68
THR
68
A
HIS
69
n
69
HIS
69
A
VAL
70
n
70
VAL
70
A
ASP
71
n
71
ASP
71
A
GLU
72
n
72
GLU
72
A
TYR
73
n
73
TYR
73
A
MET
74
n
74
MET
74
A
LEU
75
n
75
LEU
75
A
GLU
76
n
76
GLU
76
A
ALA
77
n
77
ALA
77
A
VAL
78
n
78
VAL
78
A
ASP
79
n
79
ASP
79
A
HIS
80
n
80
HIS
80
A
TYR
81
n
81
TYR
81
A
ALA
82
n
82
ALA
82
A
GLY
83
n
83
GLY
83
A
GLN
84
n
84
GLN
84
A
LEU
85
n
85
LEU
85
A
ALA
86
n
86
ALA
86
A
THR
87
n
87
THR
87
A
LEU
88
n
88
LEU
88
A
ASP
89
n
89
ASP
89
A
ILE
90
n
90
ILE
90
A
SER
91
n
91
SER
91
A
THR
92
n
92
THR
92
A
GLU
93
n
93
GLU
93
A
PRO
94
n
94
PRO
94
A
MET
95
n
95
MET
95
A
LYS
96
n
96
LYS
96
A
LEU
97
n
97
LEU
97
A
GLU
98
n
98
GLU
98
A
ASP
99
n
99
ASP
99
A
ALA
100
n
100
ALA
100
A
VAL
101
n
101
VAL
101
A
TYR
102
n
102
TYR
102
A
GLY
103
n
103
GLY
103
A
THR
104
n
104
THR
104
A
GLU
105
n
105
GLU
105
A
GLY
106
n
106
GLY
106
A
LEU
107
n
107
LEU
107
A
GLU
108
n
108
GLU
108
A
ALA
109
n
109
ALA
109
A
LEU
110
n
110
LEU
110
A
ASP
111
n
111
ASP
111
A
LEU
112
n
112
LEU
112
A
THR
113
n
113
THR
113
A
THR
114
n
114
THR
114
A
SER
115
n
115
SER
115
A
ALA
116
n
116
ALA
116
A
GLY
117
n
117
GLY
117
A
TYR
118
n
118
TYR
118
A
PRO
119
n
119
PRO
119
A
TYR
120
n
120
TYR
120
A
VAL
121
n
121
VAL
121
A
ALA
122
n
122
ALA
122
A
LEU
123
n
123
LEU
123
A
GLY
124
n
124
GLY
124
A
ILE
125
n
125
ILE
125
A
LYS
126
n
126
LYS
126
A
LYS
127
n
127
LYS
127
A
ARG
128
n
128
ARG
128
A
ASP
129
n
129
ASP
129
A
ILE
130
n
130
ILE
130
A
LEU
131
n
131
LEU
131
A
SER
132
n
132
SER
132
A
LYS
133
n
133
LYS
133
A
LYS
134
n
134
LYS
134
A
THR
135
n
135
THR
135
A
LYS
136
n
136
LYS
136
A
ASP
137
n
137
ASP
137
A
LEU
138
n
138
LEU
138
A
THR
139
n
139
THR
139
A
LYS
140
n
140
LYS
140
A
LEU
141
n
141
LEU
141
A
LYS
142
n
142
LYS
142
A
GLU
143
n
143
GLU
143
A
CYS
144
n
144
CYS
144
A
MET
145
n
145
MET
145
A
ASP
146
n
146
ASP
146
A
LYS
147
n
147
LYS
147
A
TYR
148
n
148
TYR
148
A
GLY
149
n
149
GLY
149
A
LEU
150
n
150
LEU
150
A
ASN
151
n
151
ASN
151
A
LEU
152
n
152
LEU
152
A
PRO
153
n
153
PRO
153
A
MET
154
n
154
MET
154
A
VAL
155
n
155
VAL
155
A
THR
156
n
156
THR
156
A
TYR
157
n
157
TYR
157
A
VAL
158
n
158
VAL
158
A
LYS
159
n
159
LYS
159
A
ASP
160
n
160
ASP
160
A
GLU
161
n
161
GLU
161
A
LEU
162
n
162
LEU
162
A
ARG
163
n
163
ARG
163
A
SER
164
n
164
SER
164
A
ILE
165
n
165
ILE
165
A
GLU
166
n
166
GLU
166
A
LYS
167
n
167
LYS
167
A
VAL
168
n
168
VAL
168
A
ALA
169
n
169
ALA
169
A
LYS
170
n
170
LYS
170
A
GLY
171
n
171
GLY
171
A
LYS
172
n
172
LYS
172
A
SER
173
n
173
SER
173
A
ARG
174
n
174
ARG
174
A
LEU
175
n
175
LEU
175
A
ILE
176
n
176
ILE
176
A
GLU
177
n
177
GLU
177
A
ALA
178
n
178
ALA
178
A
SER
179
n
179
SER
179
A
SER
180
n
180
SER
180
A
LEU
181
n
181
LEU
181
A
ASN
182
n
182
ASN
182
A
ASP
183
n
183
ASP
183
A
SER
184
n
184
SER
184
A
VAL
185
n
185
VAL
185
A
ALA
186
n
186
ALA
186
A
MET
187
n
187
MET
187
A
ARG
188
n
188
ARG
188
A
GLN
189
n
189
GLN
189
A
THR
190
n
190
THR
190
A
PHE
191
n
191
PHE
191
A
GLY
192
n
192
GLY
192
A
ASN
193
n
193
ASN
193
A
LEU
194
n
194
LEU
194
A
TYR
195
n
195
TYR
195
A
LYS
196
n
196
LYS
196
A
THR
197
n
197
THR
197
A
PHE
198
n
198
PHE
198
A
HIS
199
n
199
HIS
199
A
LEU
200
n
200
LEU
200
A
ASN
201
n
201
ASN
201
A
PRO
202
n
202
PRO
202
A
GLY
203
n
203
GLY
203
A
VAL
204
n
204
VAL
204
A
VAL
205
n
205
VAL
205
A
THR
206
n
206
THR
206
A
GLY
207
n
207
GLY
207
A
SER
208
n
208
SER
208
A
ALA
209
n
209
ALA
209
A
VAL
210
n
210
VAL
210
A
GLY
211
n
211
GLY
211
A
CYS
212
n
212
CYS
212
A
ASP
213
n
213
ASP
213
A
PRO
214
n
214
PRO
214
A
ASP
215
n
215
ASP
215
A
LEU
216
n
216
LEU
216
A
PHE
217
n
217
PHE
217
A
TRP
218
n
218
TRP
218
A
SER
219
n
219
SER
219
A
LYS
220
n
220
LYS
220
A
ILE
221
n
221
ILE
221
A
PRO
222
n
222
PRO
222
A
VAL
223
n
223
VAL
223
A
MET
224
n
224
MET
224
A
LEU
225
n
225
LEU
225
A
ASP
226
n
226
ASP
226
A
GLY
227
n
227
GLY
227
A
HIS
228
n
228
HIS
228
A
LEU
229
n
229
LEU
229
A
ILE
230
n
230
ILE
230
A
ALA
231
n
231
ALA
231
A
PHE
232
n
232
PHE
232
A
ASP
233
n
233
ASP
233
A
TYR
234
n
234
TYR
234
A
SER
235
n
235
SER
235
A
GLY
236
n
236
GLY
236
A
TYR
237
n
237
TYR
237
A
ASP
238
n
238
ASP
238
A
ALA
239
n
239
ALA
239
A
SER
240
n
240
SER
240
A
LEU
241
n
241
LEU
241
A
SER
242
n
242
SER
242
A
PRO
243
n
243
PRO
243
A
VAL
244
n
244
VAL
244
A
TRP
245
n
245
TRP
245
A
PHE
246
n
246
PHE
246
A
ALA
247
n
247
ALA
247
A
CYS
248
n
248
CYS
248
A
LEU
249
n
249
LEU
249
A
LYS
250
n
250
LYS
250
A
MET
251
n
251
MET
251
A
ILE
252
n
252
ILE
252
A
LEU
253
n
253
LEU
253
A
GLU
254
n
254
GLU
254
A
LYS
255
n
255
LYS
255
A
LEU
256
n
256
LEU
256
A
GLY
257
n
257
GLY
257
A
TYR
258
n
258
TYR
258
A
THR
259
n
259
THR
259
A
HIS
260
n
260
HIS
260
A
LYS
261
n
261
LYS
261
A
GLU
262
n
262
GLU
262
A
THR
263
n
263
THR
263
A
ASN
264
n
264
ASN
264
A
TYR
265
n
265
TYR
265
A
ILE
266
n
266
ILE
266
A
ASP
267
n
267
ASP
267
A
TYR
268
n
268
TYR
268
A
LEU
269
n
269
LEU
269
A
CYS
270
n
270
CYS
270
A
ASN
271
n
271
ASN
271
A
SER
272
n
272
SER
272
A
HIS
273
n
273
HIS
273
A
HIS
274
n
274
HIS
274
A
LEU
275
n
275
LEU
275
A
TYR
276
n
276
TYR
276
A
ARG
277
n
277
ARG
277
A
ASP
278
n
278
ASP
278
A
LYS
279
n
279
LYS
279
A
HIS
280
n
280
HIS
280
A
TYR
281
n
281
TYR
281
A
PHE
282
n
282
PHE
282
A
VAL
283
n
283
VAL
283
A
ARG
284
n
284
ARG
284
A
GLY
285
n
285
GLY
285
A
GLY
286
n
286
GLY
286
A
MET
287
n
287
MET
287
A
PRO
288
n
288
PRO
288
A
SER
289
n
289
SER
289
A
GLY
290
n
290
GLY
290
A
CYS
291
n
291
CYS
291
A
SER
292
n
292
SER
292
A
GLY
293
n
293
GLY
293
A
THR
294
n
294
THR
294
A
SER
295
n
295
SER
295
A
ILE
296
n
296
ILE
296
A
PHE
297
n
297
PHE
297
A
ASN
298
n
298
ASN
298
A
SER
299
n
299
SER
299
A
MET
300
n
300
MET
300
A
ILE
301
n
301
ILE
301
A
ASN
302
n
302
ASN
302
A
ASN
303
n
303
ASN
303
A
ILE
304
n
304
ILE
304
A
ILE
305
n
305
ILE
305
A
ILE
306
n
306
ILE
306
A
ARG
307
n
307
ARG
307
A
THR
308
n
308
THR
308
A
LEU
309
n
309
LEU
309
A
MET
310
n
310
MET
310
A
LEU
311
n
311
LEU
311
A
LYS
312
n
312
LYS
312
A
VAL
313
n
313
VAL
313
A
TYR
314
n
314
TYR
314
A
LYS
315
n
315
LYS
315
A
GLY
316
n
316
GLY
316
A
ILE
317
n
317
ILE
317
A
ASP
318
n
318
ASP
318
A
LEU
319
n
319
LEU
319
A
ASP
320
n
320
ASP
320
A
GLN
321
n
321
GLN
321
A
PHE
322
n
322
PHE
322
A
ARG
323
n
323
ARG
323
A
MET
324
n
324
MET
324
A
ILE
325
n
325
ILE
325
A
ALA
326
n
326
ALA
326
A
TYR
327
n
327
TYR
327
A
GLY
328
n
328
GLY
328
A
ASP
329
n
329
ASP
329
A
ASP
330
n
330
ASP
330
A
VAL
331
n
331
VAL
331
A
ILE
332
n
332
ILE
332
A
ALA
333
n
333
ALA
333
A
SER
334
n
334
SER
334
A
TYR
335
n
335
TYR
335
A
PRO
336
n
336
PRO
336
A
TRP
337
n
337
TRP
337
A
PRO
338
n
338
PRO
338
A
ILE
339
n
339
ILE
339
A
ASP
340
n
340
ASP
340
A
ALA
341
n
341
ALA
341
A
SER
342
n
342
SER
342
A
LEU
343
n
343
LEU
343
A
LEU
344
n
344
LEU
344
A
ALA
345
n
345
ALA
345
A
GLU
346
n
346
GLU
346
A
ALA
347
n
347
ALA
347
A
GLY
348
n
348
GLY
348
A
LYS
349
n
349
LYS
349
A
GLY
350
n
350
GLY
350
A
TYR
351
n
351
TYR
351
A
GLY
352
n
352
GLY
352
A
LEU
353
n
353
LEU
353
A
ILE
354
n
354
ILE
354
A
MET
355
n
355
MET
355
A
THR
356
n
356
THR
356
A
PRO
357
n
357
PRO
357
A
ALA
358
n
358
ALA
358
A
ASP
359
n
359
ASP
359
A
LYS
360
n
360
LYS
360
A
GLY
361
n
361
GLY
361
A
GLU
362
n
362
GLU
362
A
CYS
363
n
363
CYS
363
A
PHE
364
n
364
PHE
364
A
ASN
365
n
365
ASN
365
A
GLU
366
n
366
GLU
366
A
VAL
367
n
367
VAL
367
A
THR
368
n
368
THR
368
A
TRP
369
n
369
TRP
369
A
THR
370
n
370
THR
370
A
ASN
371
n
371
ASN
371
A
VAL
372
n
372
VAL
372
A
THR
373
n
373
THR
373
A
PHE
374
n
374
PHE
374
A
LEU
375
n
375
LEU
375
A
LYS
376
n
376
LYS
376
A
ARG
377
n
377
ARG
377
A
TYR
378
n
378
TYR
378
A
PHE
379
n
379
PHE
379
A
ARG
380
n
380
ARG
380
A
ALA
381
n
381
ALA
381
A
ASP
382
n
382
ASP
382
A
GLU
383
n
383
GLU
383
A
GLN
384
n
384
GLN
384
A
TYR
385
n
385
TYR
385
A
PRO
386
n
386
PRO
386
A
PHE
387
n
387
PHE
387
A
LEU
388
n
388
LEU
388
A
VAL
389
n
389
VAL
389
A
HIS
390
n
390
HIS
390
A
PRO
391
n
391
PRO
391
A
VAL
392
n
392
VAL
392
A
MET
393
n
393
MET
393
A
PRO
394
n
394
PRO
394
A
MET
395
n
395
MET
395
A
LYS
396
n
396
LYS
396
A
ASP
397
n
397
ASP
397
A
ILE
398
n
398
ILE
398
A
HIS
399
n
399
HIS
399
A
GLU
400
n
400
GLU
400
A
SER
401
n
401
SER
401
A
ILE
402
n
402
ILE
402
A
ARG
403
n
403
ARG
403
A
TRP
404
n
404
TRP
404
A
THR
405
n
405
THR
405
A
LYS
406
n
406
LYS
406
A
ASP
407
n
407
ASP
407
A
PRO
408
n
408
PRO
408
A
LYS
409
n
409
LYS
409
A
ASN
410
n
410
ASN
410
A
THR
411
n
411
THR
411
A
GLN
412
n
412
GLN
412
A
ASP
413
n
413
ASP
413
A
HIS
414
n
414
HIS
414
A
VAL
415
n
415
VAL
415
A
ARG
416
n
416
ARG
416
A
SER
417
n
417
SER
417
A
LEU
418
n
418
LEU
418
A
CYS
419
n
419
CYS
419
A
LEU
420
n
420
LEU
420
A
LEU
421
n
421
LEU
421
A
ALA
422
n
422
ALA
422
A
TRP
423
n
423
TRP
423
A
HIS
424
n
424
HIS
424
A
ASN
425
n
425
ASN
425
A
GLY
426
n
426
GLY
426
A
GLU
427
n
427
GLU
427
A
HIS
428
n
428
HIS
428
A
GLU
429
n
429
GLU
429
A
TYR
430
n
430
TYR
430
A
GLU
431
n
431
GLU
431
A
GLU
432
n
432
GLU
432
A
PHE
433
n
433
PHE
433
A
ILE
434
n
434
ILE
434
A
ARG
435
n
435
ARG
435
A
LYS
436
n
436
LYS
436
A
ILE
437
n
437
ILE
437
A
ARG
438
n
438
ARG
438
A
SER
439
n
439
SER
439
A
VAL
440
n
440
VAL
440
A
PRO
441
n
441
PRO
441
A
VAL
442
n
442
VAL
442
A
GLY
443
n
443
GLY
443
A
ARG
444
n
444
ARG
444
A
CYS
445
n
445
CYS
445
A
LEU
446
n
446
LEU
446
A
THR
447
n
447
THR
447
A
LEU
448
n
448
LEU
448
A
PRO
449
n
449
PRO
449
A
ALA
450
n
450
ALA
450
A
PHE
451
n
451
PHE
451
A
SER
452
n
452
SER
452
A
THR
453
n
453
THR
453
A
LEU
454
n
454
LEU
454
A
ARG
455
n
455
ARG
455
A
ARG
456
n
456
ARG
456
A
LYS
457
n
457
LYS
457
A
TRP
458
n
458
TRP
458
A
LEU
459
n
459
LEU
459
A
ASP
460
n
460
ASP
460
A
SER
461
n
461
SER
461
A
PHE
462
n
462
PHE
462
A
author_and_software_defined_assembly
PISA
1
monomeric
A
HIS
199
A
NE2
HIS
199
1_555
A
NA
912
G
NA
NA
1_555
A
HOH
594
Q
O
HOH
1_555
130.8
A
LEU
229
A
O
LEU
229
1_555
A
NA
907
E
NA
NA
1_555
A
VAL
367
A
O
VAL
367
1_555
106.3
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLU
2
A
N
GLU
2
A
O
ARG
284
A
O
ARG
284
A
O
TYR
281
A
O
TYR
281
A
N
HIS
274
A
N
HIS
274
A
O
HIS
273
A
O
HIS
273
A
N
MET
154
A
N
MET
154
A
N
VAL
155
A
N
VAL
155
A
O
ALA
178
A
O
ALA
178
A
N
GLU
26
A
N
GLU
26
A
O
THR
405
A
O
THR
405
A
N
GLU
39
A
N
GLU
39
A
O
ARG
163
A
O
ARG
163
A
N
ILE
230
A
N
ILE
230
A
O
ALA
333
A
O
ALA
333
A
O
SER
334
A
O
SER
334
A
N
ARG
323
A
N
ARG
323
A
N
ASP
233
A
N
ASP
233
A
O
THR
356
A
O
THR
356
A
N
ARG
380
A
N
ARG
380
A
O
HIS
390
A
O
HIS
390
1
A
PRO
20
-58.78
-145.09
1
A
SER
21
-162.63
-57.96
1
A
PRO
214
-39.08
-39.64
1
A
ARG
277
51.70
-108.03
1
A
SER
289
-39.74
121.59
1
A
TYR
314
-105.82
74.05
1
A
LYS
360
37.75
45.44
1
A
ASN
365
-56.34
172.56
CNS_TOPPAR:protein_rep.param
CNS_TOPPAR:water_rep.param
CNS_TOPPAR:ion.param
36.559
-2.618
0.000
0.000
-2.618
0.000
5.236
0.234
0.201
0.204
0.204
2.250
52.580
6064
73170
62488
8.300
85.400
Random
1
0.00
MOLECULAR REPLACEMENT
1RA6 - poliovirus polymerase
Engh & Huber
32.131
0.32
0.27
5
0.37
0.34
2.250
52.580
262
3991
39
0
3690
0.008
1.30
1.351
1.500
2.338
2.000
2.217
2.000
3.575
2.500
2.250
52.580
3DDK
35017
35017
0
0
0.051
0.910
1
33.000
9.320
18400
88.500
0.243
2.25
2.33
3.0
3435
1598
0.770
1
1.78
41.40
0.219
2.33
2.42
4.0
7560
2575
0.660
1
2.55
67.10
0.200
2.42
2.53
5.6
12849
3179
0.730
1
3.59
81.70
0.167
2.53
2.67
8.4
19653
3597
0.810
1
4.97
92.00
0.130
2.67
2.83
12.7
29686
3901
0.870
1
7.01
99.70
0.104
2.83
3.05
19.8
47336
3910
0.910
1
11.36
100.00
0.071
3.05
3.36
28.2
55860
3955
0.890
1
13.59
100.00
0.052
3.36
3.85
37.5
55616
3953
0.930
1
13.54
100.00
0.040
3.85
4.85
51.4
56346
4050
0.950
1
13.39
100.00
0.035
4.85
52.58
54.6
56328
4299
0.950
1
12.64
99.90
refinement
CNS
data reduction
d*TREK
data scaling
d*TREK
phasing
CNS
N
Coxsackievirus B3 3Dpol RNA Dependent RNA Polymerase
1
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
4
N
N
A
LYS
10
A
LYS
10
HELX_P
A
GLY
13
A
GLY
13
5
1
4
A
ASN
53
A
ASN
53
HELX_P
A
PHE
59
A
PHE
59
1
2
7
A
ASP
71
A
ASP
71
HELX_P
A
THR
87
A
THR
87
1
3
17
A
LYS
96
A
LYS
96
HELX_P
A
GLY
103
A
GLY
103
1
4
8
A
LYS
126
A
LYS
126
HELX_P
A
ILE
130
A
ILE
130
5
5
5
A
LEU
138
A
LEU
138
HELX_P
A
GLY
149
A
GLY
149
1
6
12
A
SER
164
A
SER
164
HELX_P
A
LYS
170
A
LYS
170
1
7
7
A
SER
180
A
SER
180
HELX_P
A
ASN
201
A
ASN
201
1
8
22
A
ASP
213
A
ASP
213
HELX_P
A
TRP
218
A
TRP
218
1
9
6
A
LYS
220
A
LYS
220
HELX_P
A
LEU
225
A
LEU
225
1
10
6
A
GLY
236
A
GLY
236
HELX_P
A
LEU
241
A
LEU
241
1
11
6
A
SER
242
A
SER
242
HELX_P
A
LEU
256
A
LEU
256
1
12
15
A
THR
263
A
THR
263
HELX_P
A
CYS
270
A
CYS
270
1
13
8
A
GLY
293
A
GLY
293
HELX_P
A
TYR
314
A
TYR
314
1
14
22
A
ASP
318
A
ASP
318
HELX_P
A
PHE
322
A
PHE
322
5
15
5
A
ASP
340
A
ASP
340
HELX_P
A
GLY
350
A
GLY
350
1
16
11
A
ASP
359
A
ASP
359
HELX_P
A
GLY
361
A
GLY
361
5
17
3
A
PRO
394
A
PRO
394
HELX_P
A
ARG
403
A
ARG
403
1
18
10
A
ASP
407
A
ASP
407
HELX_P
A
LYS
409
A
LYS
409
5
19
3
A
ASN
410
A
ASN
410
HELX_P
A
TRP
423
A
TRP
423
1
20
14
A
GLY
426
A
GLY
426
HELX_P
A
ARG
438
A
ARG
438
1
21
13
A
SER
439
A
SER
439
HELX_P
A
LEU
446
A
LEU
446
5
22
8
A
ALA
450
A
ALA
450
HELX_P
A
SER
461
A
SER
461
1
23
12
metalc
2.897
A
HIS
199
A
NE2
HIS
199
1_555
A
NA
912
G
NA
NA
1_555
metalc
2.914
A
LEU
229
A
O
LEU
229
1_555
A
NA
907
E
NA
NA
1_555
metalc
2.700
A
LYS
315
A
O
LYS
315
1_555
A
NA
918
J
NA
NA
1_555
metalc
2.896
A
VAL
367
A
O
VAL
367
1_555
A
NA
907
E
NA
NA
1_555
metalc
2.905
A
HOH
548
Q
O
HOH
1_555
A
NA
910
F
NA
NA
1_555
metalc
2.760
A
HOH
594
Q
O
HOH
1_555
A
NA
912
G
NA
NA
1_555
TRANSFERASE, VIRAL PROTEIN
RNA polymerase, viral polymerase, RNA virus, TRANSFERASE, VIRAL PROTEIN
A
TYR
118
A
TYR
118
1
A
PRO
119
A
PRO
119
0.22
Q66338_9ENTO
UNP
1
1724
Q66338
GEIEFIESSKDAGFPVINTPSKTKLEPSVFHQVFEGNKEPAVLRSGDPRLKANFEEAIFSKYIGNVNTHVDEYMLEAVDH
YAGQLATLDISTEPMKLEDAVYGTEGLEALDLTTSAGYPYVALGIKKRDILSKKTKDLTKLKECMDKYGLNLPMVTYVKD
ELRSIEKVAKGKSRLIEASSLNDSVAMRQTFGNLYKTFHLNPGVVTGSAVGCDPDLFWSKIPVMLDGHLIAFDYSGYDAS
LSPVWFACLKMLLEKLGYTHKETNYIDYLCNSHHLYRDKHYFVRGGMPSGCSGTSIFNSMINNIIIRTLMLKVYKGIDLD
QFRMIAYGDDVIASYPWPIDASLLAEAGKGYGLIMTPADKGECFNEVTWTNVTFLKRYFRADEQYPFLVHPVMPMKDIHE
SIRWTKDPKNTQDHVRSLCLLAWHNGEHEYEEFIRKIRSVPVGRCLTLPAFSTLRRKWLDSF
1724
2185
3DDK
1
462
Q66338
A
1
1
462
1
LEU
conflict
ILE
252
3DDK
A
Q66338
UNP
1975
252
5
2
2
3
2
2
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLU
2
A
GLU
2
A
SER
8
A
SER
8
A
LYS
279
A
LYS
279
A
ARG
284
A
ARG
284
A
ASN
271
A
ASN
271
A
TYR
276
A
TYR
276
A
MET
154
A
MET
154
A
VAL
158
A
VAL
158
A
LEU
175
A
LEU
175
A
ALA
178
A
ALA
178
A
GLU
26
A
GLU
26
A
PRO
27
A
PRO
27
A
TRP
404
A
TRP
404
A
THR
405
A
THR
405
A
GLU
39
A
GLU
39
A
PRO
40
A
PRO
40
A
LEU
162
A
LEU
162
A
ARG
163
A
ARG
163
A
HIS
228
A
HIS
228
A
ILE
230
A
ILE
230
A
ASP
330
A
ASP
330
A
TYR
335
A
TYR
335
A
ARG
323
A
ARG
323
A
TYR
327
A
TYR
327
A
PHE
232
A
PHE
232
A
TYR
234
A
TYR
234
A
MET
355
A
MET
355
A
PRO
357
A
PRO
357
A
TYR
378
A
TYR
378
A
ALA
381
A
ALA
381
A
VAL
389
A
VAL
389
A
VAL
392
A
VAL
392
BINDING SITE FOR RESIDUE NA A 906
A
NA
906
Software
4
BINDING SITE FOR RESIDUE NA A 907
A
NA
907
Software
3
BINDING SITE FOR RESIDUE NA A 910
A
NA
910
Software
3
BINDING SITE FOR RESIDUE NA A 912
A
NA
912
Software
3
BINDING SITE FOR RESIDUE NA A 913
A
NA
913
Software
2
BINDING SITE FOR RESIDUE NA A 918
A
NA
918
Software
2
BINDING SITE FOR RESIDUE SO4 A 919
A
SO4
919
Software
4
BINDING SITE FOR RESIDUE SO4 A 920
A
SO4
920
Software
6
BINDING SITE FOR RESIDUE SO4 A 921
A
SO4
921
Software
3
BINDING SITE FOR RESIDUE SO4 A 922
A
SO4
922
Software
3
BINDING SITE FOR RESIDUE SO4 A 923
A
SO4
923
Software
4
BINDING SITE FOR RESIDUE SO4 A 924
A
SO4
924
Software
6
A
ARG
188
A
ARG
188
4
1_555
A
SER
292
A
SER
292
4
1_555
A
GLY
293
A
GLY
293
4
1_555
A
HOH
565
Q
HOH
4
1_555
A
LEU
229
A
LEU
229
3
1_555
A
GLU
366
A
GLU
366
3
1_555
A
HOH
625
Q
HOH
3
1_555
A
ASP
71
A
ASP
71
3
1_555
A
GLU
72
A
GLU
72
3
1_555
A
HOH
548
Q
HOH
3
1_555
A
HIS
199
A
HIS
199
3
1_555
A
HOH
565
Q
HOH
3
1_555
A
HOH
594
Q
HOH
3
1_555
A
GLU
35
A
GLU
35
2
1_555
A
HIS
399
A
HIS
399
2
1_555
A
LYS
315
A
LYS
315
2
1_555
A
HOH
659
Q
HOH
2
1_555
A
LYS
38
A
LYS
38
4
1_555
A
ARG
163
A
ARG
163
4
1_555
A
ARG
174
A
ARG
174
4
1_555
A
LYS
376
A
LYS
376
4
1_555
A
ARG
174
A
ARG
174
6
1_555
A
TYR
234
A
TYR
234
6
1_555
A
GLY
236
A
GLY
236
6
1_555
A
HOH
630
Q
HOH
6
1_555
A
HOH
673
Q
HOH
6
1_555
A
HOH
770
Q
HOH
6
1_555
A
ARG
44
A
ARG
44
3
1_555
A
SER
45
A
SER
45
3
1_555
A
ARG
277
A
ARG
277
3
1_555
A
PRO
243
A
PRO
243
3
1_555
A
ASP
267
A
ASP
267
3
1_555
A
CYS
270
A
CYS
270
3
1_555
A
LEU
110
A
LEU
110
4
1_555
A
ASP
111
A
ASP
111
4
1_555
A
ARG
188
A
ARG
188
4
1_555
A
HOH
587
Q
HOH
4
1_555
A
GLY
227
A
GLY
227
6
1_555
A
HIS
228
A
HIS
228
6
1_555
A
LEU
229
A
LEU
229
6
1_555
A
GLU
366
A
GLU
366
6
1_555
A
THR
368
A
THR
368
6
1_555
A
HOH
620
Q
HOH
6
1_555
96
P 43 21 2