0.014739
0.000000
0.000000
0.000000
0.014739
0.000000
0.000000
0.000000
0.009758
0.000000
0.000000
0.000000
Pechkova, E.
Tripathi, S.K.
Nicolini, C.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.000
90.000
90.000
67.847
67.847
102.482
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Ca 2
40.078
CALCIUM ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
J.Struct.Biol.
JSBIEM
0803
1047-8477
168
409
418
10.1016/j.jsb.2009.08.005
19686853
Radiation stability of proteinase K crystals grown by LB nanotemplate method
2009
100
1
CCD
2007-02-07
ADSC QUANTUM 315
Si 111 CHANNEL
SINGLE WAVELENGTH
M
x-ray
1
0.97625
1.0
ID23-1
ESRF
0.97625
SYNCHROTRON
ESRF BEAMLINE ID23-1
28930.783
Proteinase K
3.4.21.64
1
nat
polymer
40.078
CALCIUM ION
1
syn
non-polymer
18.015
water
198
nat
water
Tritirachium alkaline proteinase, Endopeptidase K
no
no
AAQTNAPWGLARISSTSPGTSTYYYDESAGQGSCVYVIDTGIEASHPEFEGRAQMVKTYYYSSRDGNGHGTHCAGTVGSR
TYGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGGYSSSVNSAAARLQSSGVMVAVAAG
NNNADARNYSPASEPSVCTVGASDRYDRRSSFSNYGSVLDIFGPGTSILSTWIGGSTRSISGTSMATPHVAGLAAYLMTL
GKTTAASACRYIADTANKGDLSNIPFGTVNLLAYNNYQA
AAQTNAPWGLARISSTSPGTSTYYYDESAGQGSCVYVIDTGIEASHPEFEGRAQMVKTYYYSSRDGNGHGTHCAGTVGSR
TYGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGGYSSSVNSAAARLQSSGVMVAVAAG
NNNADARNYSPASEPSVCTVGASDRYDRRSSFSNYGSVLDIFGPGTSILSTWIGGSTRSISGTSMATPHVAGLAAYLMTL
GKTTAASACRYIADTANKGDLSNIPFGTVNLLAYNNYQA
X
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Engyodontium album
sample
37998
Engyodontium album
Limber
1
2.04
39.65
0.330
VAPOR DIFFUSION, HANGING DROP
7.0
20mg/ml of protein in 25mM HEPES, pH7.0, reservoir solution composed by 25mM HEPES and 400mM Na/K tartrate at pH7.0. Onto the siliconized glass cover slides were mixed 4 microL of protein solution with 4 microL of reservoir solution., VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
repository
Initial release
Version format compliance
1
0
2009-06-09
1
1
2011-07-13
RCSB
Y
PDBJ
2008-06-08
REL
REL
CA
CALCIUM ION
HOH
water
CA
280
2
CA
CA
281
X
HOH
281
3
HOH
HOH
283
X
HOH
300
3
HOH
HOH
284
X
HOH
301
3
HOH
HOH
285
X
HOH
302
3
HOH
HOH
286
X
HOH
303
3
HOH
HOH
287
X
HOH
304
3
HOH
HOH
288
X
HOH
305
3
HOH
HOH
289
X
HOH
306
3
HOH
HOH
290
X
HOH
307
3
HOH
HOH
291
X
HOH
308
3
HOH
HOH
292
X
HOH
309
3
HOH
HOH
293
X
HOH
310
3
HOH
HOH
294
X
HOH
311
3
HOH
HOH
295
X
HOH
312
3
HOH
HOH
296
X
HOH
313
3
HOH
HOH
297
X
HOH
314
3
HOH
HOH
298
X
HOH
315
3
HOH
HOH
299
X
HOH
316
3
HOH
HOH
300
X
HOH
317
3
HOH
HOH
301
X
HOH
318
3
HOH
HOH
302
X
HOH
319
3
HOH
HOH
303
X
HOH
320
3
HOH
HOH
304
X
HOH
321
3
HOH
HOH
305
X
HOH
322
3
HOH
HOH
306
X
HOH
323
3
HOH
HOH
307
X
HOH
324
3
HOH
HOH
308
X
HOH
325
3
HOH
HOH
309
X
HOH
326
3
HOH
HOH
310
X
HOH
327
3
HOH
HOH
311
X
HOH
328
3
HOH
HOH
312
X
HOH
329
3
HOH
HOH
313
X
HOH
330
3
HOH
HOH
314
X
HOH
331
3
HOH
HOH
315
X
HOH
332
3
HOH
HOH
316
X
HOH
333
3
HOH
HOH
317
X
HOH
334
3
HOH
HOH
318
X
HOH
335
3
HOH
HOH
319
X
HOH
336
3
HOH
HOH
320
X
HOH
337
3
HOH
HOH
321
X
HOH
338
3
HOH
HOH
322
X
HOH
339
3
HOH
HOH
323
X
HOH
340
3
HOH
HOH
324
X
HOH
341
3
HOH
HOH
325
X
HOH
342
3
HOH
HOH
326
X
HOH
343
3
HOH
HOH
327
X
HOH
344
3
HOH
HOH
328
X
HOH
345
3
HOH
HOH
329
X
HOH
346
3
HOH
HOH
330
X
HOH
347
3
HOH
HOH
331
X
HOH
348
3
HOH
HOH
332
X
HOH
349
3
HOH
HOH
333
X
HOH
350
3
HOH
HOH
334
X
HOH
351
3
HOH
HOH
335
X
HOH
352
3
HOH
HOH
336
X
HOH
353
3
HOH
HOH
337
X
HOH
354
3
HOH
HOH
338
X
HOH
355
3
HOH
HOH
339
X
HOH
356
3
HOH
HOH
340
X
HOH
357
3
HOH
HOH
341
X
HOH
358
3
HOH
HOH
342
X
HOH
359
3
HOH
HOH
343
X
HOH
360
3
HOH
HOH
344
X
HOH
361
3
HOH
HOH
345
X
HOH
362
3
HOH
HOH
346
X
HOH
363
3
HOH
HOH
347
X
HOH
364
3
HOH
HOH
348
X
HOH
365
3
HOH
HOH
349
X
HOH
366
3
HOH
HOH
350
X
HOH
367
3
HOH
HOH
351
X
HOH
368
3
HOH
HOH
352
X
HOH
369
3
HOH
HOH
353
X
HOH
370
3
HOH
HOH
354
X
HOH
371
3
HOH
HOH
355
X
HOH
372
3
HOH
HOH
356
X
HOH
373
3
HOH
HOH
357
X
HOH
374
3
HOH
HOH
358
X
HOH
375
3
HOH
HOH
359
X
HOH
376
3
HOH
HOH
360
X
HOH
377
3
HOH
HOH
361
X
HOH
378
3
HOH
HOH
362
X
HOH
379
3
HOH
HOH
363
X
HOH
380
3
HOH
HOH
364
X
HOH
381
3
HOH
HOH
365
X
HOH
382
3
HOH
HOH
366
X
HOH
383
3
HOH
HOH
367
X
HOH
384
3
HOH
HOH
368
X
HOH
385
3
HOH
HOH
369
X
HOH
386
3
HOH
HOH
370
X
HOH
387
3
HOH
HOH
371
X
HOH
388
3
HOH
HOH
372
X
HOH
389
3
HOH
HOH
373
X
HOH
390
3
HOH
HOH
374
X
HOH
391
3
HOH
HOH
375
X
HOH
392
3
HOH
HOH
376
X
HOH
393
3
HOH
HOH
377
X
HOH
394
3
HOH
HOH
378
X
HOH
395
3
HOH
HOH
379
X
HOH
396
3
HOH
HOH
380
X
HOH
397
3
HOH
HOH
381
X
HOH
398
3
HOH
HOH
382
X
HOH
399
3
HOH
HOH
383
X
HOH
400
3
HOH
HOH
384
X
HOH
401
3
HOH
HOH
385
X
HOH
402
3
HOH
HOH
386
X
HOH
403
3
HOH
HOH
387
X
HOH
404
3
HOH
HOH
388
X
HOH
405
3
HOH
HOH
389
X
HOH
406
3
HOH
HOH
390
X
HOH
407
3
HOH
HOH
391
X
HOH
408
3
HOH
HOH
392
X
HOH
409
3
HOH
HOH
393
X
HOH
410
3
HOH
HOH
394
X
HOH
411
3
HOH
HOH
395
X
HOH
412
3
HOH
HOH
396
X
HOH
413
3
HOH
HOH
397
X
HOH
414
3
HOH
HOH
398
X
HOH
415
3
HOH
HOH
399
X
HOH
416
3
HOH
HOH
400
X
HOH
417
3
HOH
HOH
401
X
HOH
418
3
HOH
HOH
402
X
HOH
419
3
HOH
HOH
403
X
HOH
420
3
HOH
HOH
404
X
HOH
421
3
HOH
HOH
405
X
HOH
422
3
HOH
HOH
406
X
HOH
423
3
HOH
HOH
407
X
HOH
424
3
HOH
HOH
408
X
HOH
425
3
HOH
HOH
409
X
HOH
426
3
HOH
HOH
410
X
HOH
427
3
HOH
HOH
411
X
HOH
428
3
HOH
HOH
412
X
HOH
429
3
HOH
HOH
413
X
HOH
430
3
HOH
HOH
414
X
HOH
431
3
HOH
HOH
415
X
HOH
432
3
HOH
HOH
416
X
HOH
433
3
HOH
HOH
417
X
HOH
434
3
HOH
HOH
418
X
HOH
435
3
HOH
HOH
419
X
HOH
436
3
HOH
HOH
420
X
HOH
437
3
HOH
HOH
421
X
HOH
438
3
HOH
HOH
422
X
HOH
439
3
HOH
HOH
423
X
HOH
440
3
HOH
HOH
424
X
HOH
441
3
HOH
HOH
425
X
HOH
442
3
HOH
HOH
426
X
HOH
443
3
HOH
HOH
427
X
HOH
444
3
HOH
HOH
428
X
HOH
445
3
HOH
HOH
429
X
HOH
446
3
HOH
HOH
430
X
HOH
447
3
HOH
HOH
431
X
HOH
448
3
HOH
HOH
432
X
HOH
449
3
HOH
HOH
433
X
HOH
450
3
HOH
HOH
434
X
HOH
451
3
HOH
HOH
435
X
HOH
452
3
HOH
HOH
436
X
HOH
453
3
HOH
HOH
437
X
HOH
454
3
HOH
HOH
438
X
HOH
455
3
HOH
HOH
439
X
HOH
456
3
HOH
HOH
440
X
HOH
457
3
HOH
HOH
441
X
HOH
458
3
HOH
HOH
442
X
HOH
459
3
HOH
HOH
443
X
HOH
460
3
HOH
HOH
444
X
HOH
461
3
HOH
HOH
445
X
HOH
462
3
HOH
HOH
446
X
HOH
463
3
HOH
HOH
447
X
HOH
464
3
HOH
HOH
448
X
HOH
465
3
HOH
HOH
449
X
HOH
466
3
HOH
HOH
450
X
HOH
467
3
HOH
HOH
451
X
HOH
468
3
HOH
HOH
452
X
HOH
469
3
HOH
HOH
453
X
HOH
470
3
HOH
HOH
454
X
HOH
471
3
HOH
HOH
455
X
HOH
472
3
HOH
HOH
456
X
HOH
473
3
HOH
HOH
457
X
HOH
474
3
HOH
HOH
458
X
HOH
475
3
HOH
HOH
459
X
HOH
476
3
HOH
HOH
460
X
HOH
477
3
HOH
HOH
461
X
HOH
478
3
HOH
HOH
462
X
HOH
479
3
HOH
HOH
463
X
HOH
480
3
HOH
HOH
464
X
HOH
481
3
HOH
HOH
465
X
HOH
483
3
HOH
HOH
466
X
HOH
484
3
HOH
HOH
467
X
HOH
485
3
HOH
HOH
468
X
HOH
486
3
HOH
HOH
469
X
HOH
487
3
HOH
HOH
470
X
HOH
488
3
HOH
HOH
471
X
HOH
489
3
HOH
HOH
472
X
HOH
490
3
HOH
HOH
473
X
HOH
491
3
HOH
HOH
474
X
HOH
492
3
HOH
HOH
475
X
HOH
493
3
HOH
HOH
476
X
HOH
494
3
HOH
HOH
477
X
HOH
495
3
HOH
HOH
478
X
HOH
496
3
HOH
HOH
479
X
HOH
497
3
HOH
HOH
480
X
ALA
1
n
1
ALA
1
X
ALA
2
n
2
ALA
2
X
GLN
3
n
3
GLN
3
X
THR
4
n
4
THR
4
X
ASN
5
n
5
ASN
5
X
ALA
6
n
6
ALA
6
X
PRO
7
n
7
PRO
7
X
TRP
8
n
8
TRP
8
X
GLY
9
n
9
GLY
9
X
LEU
10
n
10
LEU
10
X
ALA
11
n
11
ALA
11
X
ARG
12
n
12
ARG
12
X
ILE
13
n
13
ILE
13
X
SER
14
n
14
SER
14
X
SER
15
n
15
SER
15
X
THR
16
n
16
THR
16
X
SER
17
n
17
SER
17
X
PRO
18
n
18
PRO
18
X
GLY
19
n
19
GLY
19
X
THR
20
n
20
THR
20
X
SER
21
n
21
SER
21
X
THR
22
n
22
THR
22
X
TYR
23
n
23
TYR
23
X
TYR
24
n
24
TYR
24
X
TYR
25
n
25
TYR
25
X
ASP
26
n
26
ASP
26
X
GLU
27
n
27
GLU
27
X
SER
28
n
28
SER
28
X
ALA
29
n
29
ALA
29
X
GLY
30
n
30
GLY
30
X
GLN
31
n
31
GLN
31
X
GLY
32
n
32
GLY
32
X
SER
33
n
33
SER
33
X
CYS
34
n
34
CYS
34
X
VAL
35
n
35
VAL
35
X
TYR
36
n
36
TYR
36
X
VAL
37
n
37
VAL
37
X
ILE
38
n
38
ILE
38
X
ASP
39
n
39
ASP
39
X
THR
40
n
40
THR
40
X
GLY
41
n
41
GLY
41
X
ILE
42
n
42
ILE
42
X
GLU
43
n
43
GLU
43
X
ALA
44
n
44
ALA
44
X
SER
45
n
45
SER
45
X
HIS
46
n
46
HIS
46
X
PRO
47
n
47
PRO
47
X
GLU
48
n
48
GLU
48
X
PHE
49
n
49
PHE
49
X
GLU
50
n
50
GLU
50
X
GLY
51
n
51
GLY
51
X
ARG
52
n
52
ARG
52
X
ALA
53
n
53
ALA
53
X
GLN
54
n
54
GLN
54
X
MET
55
n
55
MET
55
X
VAL
56
n
56
VAL
56
X
LYS
57
n
57
LYS
57
X
THR
58
n
58
THR
58
X
TYR
59
n
59
TYR
59
X
TYR
60
n
60
TYR
60
X
TYR
61
n
61
TYR
61
X
SER
62
n
62
SER
62
X
SER
63
n
63
SER
63
X
ARG
64
n
64
ARG
64
X
ASP
65
n
65
ASP
65
X
GLY
66
n
66
GLY
66
X
ASN
67
n
67
ASN
67
X
GLY
68
n
68
GLY
68
X
HIS
69
n
69
HIS
69
X
GLY
70
n
70
GLY
70
X
THR
71
n
71
THR
71
X
HIS
72
n
72
HIS
72
X
CYS
73
n
73
CYS
73
X
ALA
74
n
74
ALA
74
X
GLY
75
n
75
GLY
75
X
THR
76
n
76
THR
76
X
VAL
77
n
77
VAL
77
X
GLY
78
n
78
GLY
78
X
SER
79
n
79
SER
79
X
ARG
80
n
80
ARG
80
X
THR
81
n
81
THR
81
X
TYR
82
n
82
TYR
82
X
GLY
83
n
83
GLY
83
X
VAL
84
n
84
VAL
84
X
ALA
85
n
85
ALA
85
X
LYS
86
n
86
LYS
86
X
LYS
87
n
87
LYS
87
X
THR
88
n
88
THR
88
X
GLN
89
n
89
GLN
89
X
LEU
90
n
90
LEU
90
X
PHE
91
n
91
PHE
91
X
GLY
92
n
92
GLY
92
X
VAL
93
n
93
VAL
93
X
LYS
94
n
94
LYS
94
X
VAL
95
n
95
VAL
95
X
LEU
96
n
96
LEU
96
X
ASP
97
n
97
ASP
97
X
ASP
98
n
98
ASP
98
X
ASN
99
n
99
ASN
99
X
GLY
100
n
100
GLY
100
X
SER
101
n
101
SER
101
X
GLY
102
n
102
GLY
102
X
GLN
103
n
103
GLN
103
X
TYR
104
n
104
TYR
104
X
SER
105
n
105
SER
105
X
THR
106
n
106
THR
106
X
ILE
107
n
107
ILE
107
X
ILE
108
n
108
ILE
108
X
ALA
109
n
109
ALA
109
X
GLY
110
n
110
GLY
110
X
MET
111
n
111
MET
111
X
ASP
112
n
112
ASP
112
X
PHE
113
n
113
PHE
113
X
VAL
114
n
114
VAL
114
X
ALA
115
n
115
ALA
115
X
SER
116
n
116
SER
116
X
ASP
117
n
117
ASP
117
X
LYS
118
n
118
LYS
118
X
ASN
119
n
119
ASN
119
X
ASN
120
n
120
ASN
120
X
ARG
121
n
121
ARG
121
X
ASN
122
n
122
ASN
122
X
CYS
123
n
123
CYS
123
X
PRO
124
n
124
PRO
124
X
LYS
125
n
125
LYS
125
X
GLY
126
n
126
GLY
126
X
VAL
127
n
127
VAL
127
X
VAL
128
n
128
VAL
128
X
ALA
129
n
129
ALA
129
X
SER
130
n
130
SER
130
X
LEU
131
n
131
LEU
131
X
SER
132
n
132
SER
132
X
LEU
133
n
133
LEU
133
X
GLY
134
n
134
GLY
134
X
GLY
135
n
135
GLY
135
X
GLY
136
n
136
GLY
136
X
TYR
137
n
137
TYR
137
X
SER
138
n
138
SER
138
X
SER
139
n
139
SER
139
X
SER
140
n
140
SER
140
X
VAL
141
n
141
VAL
141
X
ASN
142
n
142
ASN
142
X
SER
143
n
143
SER
143
X
ALA
144
n
144
ALA
144
X
ALA
145
n
145
ALA
145
X
ALA
146
n
146
ALA
146
X
ARG
147
n
147
ARG
147
X
LEU
148
n
148
LEU
148
X
GLN
149
n
149
GLN
149
X
SER
150
n
150
SER
150
X
SER
151
n
151
SER
151
X
GLY
152
n
152
GLY
152
X
VAL
153
n
153
VAL
153
X
MET
154
n
154
MET
154
X
VAL
155
n
155
VAL
155
X
ALA
156
n
156
ALA
156
X
VAL
157
n
157
VAL
157
X
ALA
158
n
158
ALA
158
X
ALA
159
n
159
ALA
159
X
GLY
160
n
160
GLY
160
X
ASN
161
n
161
ASN
161
X
ASN
162
n
162
ASN
162
X
ASN
163
n
163
ASN
163
X
ALA
164
n
164
ALA
164
X
ASP
165
n
165
ASP
165
X
ALA
166
n
166
ALA
166
X
ARG
167
n
167
ARG
167
X
ASN
168
n
168
ASN
168
X
TYR
169
n
169
TYR
169
X
SER
170
n
170
SER
170
X
PRO
171
n
171
PRO
171
X
ALA
172
n
172
ALA
172
X
SER
173
n
173
SER
173
X
GLU
174
n
174
GLU
174
X
PRO
175
n
175
PRO
175
X
SER
176
n
176
SER
176
X
VAL
177
n
177
VAL
177
X
CYS
178
n
178
CYS
178
X
THR
179
n
179
THR
179
X
VAL
180
n
180
VAL
180
X
GLY
181
n
181
GLY
181
X
ALA
182
n
182
ALA
182
X
SER
183
n
183
SER
183
X
ASP
184
n
184
ASP
184
X
ARG
185
n
185
ARG
185
X
TYR
186
n
186
TYR
186
X
ASP
187
n
187
ASP
187
X
ARG
188
n
188
ARG
188
X
ARG
189
n
189
ARG
189
X
SER
190
n
190
SER
190
X
SER
191
n
191
SER
191
X
PHE
192
n
192
PHE
192
X
SER
193
n
193
SER
193
X
ASN
194
n
194
ASN
194
X
TYR
195
n
195
TYR
195
X
GLY
196
n
196
GLY
196
X
SER
197
n
197
SER
197
X
VAL
198
n
198
VAL
198
X
LEU
199
n
199
LEU
199
X
ASP
200
n
200
ASP
200
X
ILE
201
n
201
ILE
201
X
PHE
202
n
202
PHE
202
X
GLY
203
n
203
GLY
203
X
PRO
204
n
204
PRO
204
X
GLY
205
n
205
GLY
205
X
THR
206
n
206
THR
206
X
SER
207
n
207
SER
207
X
ILE
208
n
208
ILE
208
X
LEU
209
n
209
LEU
209
X
SER
210
n
210
SER
210
X
THR
211
n
211
THR
211
X
TRP
212
n
212
TRP
212
X
ILE
213
n
213
ILE
213
X
GLY
214
n
214
GLY
214
X
GLY
215
n
215
GLY
215
X
SER
216
n
216
SER
216
X
THR
217
n
217
THR
217
X
ARG
218
n
218
ARG
218
X
SER
219
n
219
SER
219
X
ILE
220
n
220
ILE
220
X
SER
221
n
221
SER
221
X
GLY
222
n
222
GLY
222
X
THR
223
n
223
THR
223
X
SER
224
n
224
SER
224
X
MET
225
n
225
MET
225
X
ALA
226
n
226
ALA
226
X
THR
227
n
227
THR
227
X
PRO
228
n
228
PRO
228
X
HIS
229
n
229
HIS
229
X
VAL
230
n
230
VAL
230
X
ALA
231
n
231
ALA
231
X
GLY
232
n
232
GLY
232
X
LEU
233
n
233
LEU
233
X
ALA
234
n
234
ALA
234
X
ALA
235
n
235
ALA
235
X
TYR
236
n
236
TYR
236
X
LEU
237
n
237
LEU
237
X
MET
238
n
238
MET
238
X
THR
239
n
239
THR
239
X
LEU
240
n
240
LEU
240
X
GLY
241
n
241
GLY
241
X
LYS
242
n
242
LYS
242
X
THR
243
n
243
THR
243
X
THR
244
n
244
THR
244
X
ALA
245
n
245
ALA
245
X
ALA
246
n
246
ALA
246
X
SER
247
n
247
SER
247
X
ALA
248
n
248
ALA
248
X
CYS
249
n
249
CYS
249
X
ARG
250
n
250
ARG
250
X
TYR
251
n
251
TYR
251
X
ILE
252
n
252
ILE
252
X
ALA
253
n
253
ALA
253
X
ASP
254
n
254
ASP
254
X
THR
255
n
255
THR
255
X
ALA
256
n
256
ALA
256
X
ASN
257
n
257
ASN
257
X
LYS
258
n
258
LYS
258
X
GLY
259
n
259
GLY
259
X
ASP
260
n
260
ASP
260
X
LEU
261
n
261
LEU
261
X
SER
262
n
262
SER
262
X
ASN
263
n
263
ASN
263
X
ILE
264
n
264
ILE
264
X
PRO
265
n
265
PRO
265
X
PHE
266
n
266
PHE
266
X
GLY
267
n
267
GLY
267
X
THR
268
n
268
THR
268
X
VAL
269
n
269
VAL
269
X
ASN
270
n
270
ASN
270
X
LEU
271
n
271
LEU
271
X
LEU
272
n
272
LEU
272
X
ALA
273
n
273
ALA
273
X
TYR
274
n
274
TYR
274
X
ASN
275
n
275
ASN
275
X
ASN
276
n
276
ASN
276
X
TYR
277
n
277
TYR
277
X
GLN
278
n
278
GLN
278
X
ALA
279
n
279
ALA
279
X
author_and_software_defined_assembly
PISA
1
monomeric
X
PRO
175
A
O
PRO
175
1_555
X
CA
281
B
CA
CA
1_555
X
HOH
309
C
O
HOH
1_555
143.3
X
PRO
175
A
O
PRO
175
1_555
X
CA
281
B
CA
CA
1_555
X
HOH
383
C
O
HOH
1_555
122.5
X
HOH
309
C
O
HOH
1_555
X
CA
281
B
CA
CA
1_555
X
HOH
383
C
O
HOH
1_555
61.2
X
PRO
175
A
O
PRO
175
1_555
X
CA
281
B
CA
CA
1_555
X
HOH
374
C
O
HOH
1_555
94.3
X
HOH
309
C
O
HOH
1_555
X
CA
281
B
CA
CA
1_555
X
HOH
374
C
O
HOH
1_555
59.3
X
HOH
383
C
O
HOH
1_555
X
CA
281
B
CA
CA
1_555
X
HOH
374
C
O
HOH
1_555
49.4
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
X
N
GLN
3
A
N
GLN
3
X
O
TYR
23
A
O
TYR
23
X
N
GLN
54
A
N
GLN
54
X
O
GLY
92
A
O
GLY
92
X
O
GLN
89
A
O
GLN
89
X
N
VAL
35
A
N
VAL
35
X
N
TYR
36
A
N
TYR
36
X
O
SER
130
A
O
SER
130
X
N
LEU
131
A
N
LEU
131
X
O
ALA
156
A
O
ALA
156
X
N
VAL
155
A
N
VAL
155
X
O
CYS
178
A
O
CYS
178
X
N
GLY
181
A
N
GLY
181
X
O
ILE
201
A
O
ILE
201
X
N
GLY
135
A
N
GLY
135
X
O
SER
170
A
O
SER
170
X
N
ILE
208
A
N
ILE
208
X
O
ILE
220
A
O
ILE
220
X
N
ASN
257
A
N
ASN
257
X
O
LEU
272
A
O
LEU
272
1
X
CD
ARG
64
A
CD
ARG
64
1
Y
1
X
NE
ARG
64
A
NE
ARG
64
1
Y
1
X
CZ
ARG
64
A
CZ
ARG
64
1
Y
1
X
NH1
ARG
64
A
NH1
ARG
64
1
Y
1
X
NH2
ARG
64
A
NH2
ARG
64
1
Y
1
X
CB
GLN
278
A
CB
GLN
278
1
Y
1
X
CG
GLN
278
A
CG
GLN
278
1
Y
1
X
CD
GLN
278
A
CD
GLN
278
1
Y
1
X
OE1
GLN
278
A
OE1
GLN
278
1
Y
1
X
NE2
GLN
278
A
NE2
GLN
278
1
Y
1
X
X
O
O
HOH
HOH
319
408
1.70
1
X
X
O
O
HOH
HOH
374
383
1.93
1
X
X
O
O
HOH
HOH
364
393
2.06
1
X
X
O
O
HOH
HOH
321
394
2.07
1
X
X
O
O
HOH
HOH
360
372
2.10
1
X
X
O
O
THR
HOH
243
375
2.17
1
X
X
ND2
O
ASN
HOH
263
391
2.18
1
-12.74
1.90
113.40
100.66
X
X
X
CA
CB
CG
TYR
TYR
TYR
61
61
61
N
1
-12.63
2.10
111.80
99.17
X
X
X
CG
CD
NE
ARG
ARG
ARG
218
218
218
N
1
3.38
0.50
120.30
123.68
X
X
X
NE
CZ
NH1
ARG
ARG
ARG
218
218
218
N
1
-6.81
0.50
120.30
113.49
X
X
X
NE
CZ
NH2
ARG
ARG
ARG
218
218
218
N
1
X
X
O
O
HOH
HOH
380
420
1.78
1_555
5_454
1
X
X
ND2
OE1
ASN
GLN
5
103
1.85
1_555
3_554
1
X
X
O
O
HOH
HOH
386
456
1.92
1_555
3_554
1
X
X
OG
ND2
SER
ASN
15
122
1.98
1_555
5_444
1
X
X
OH
O
TYR
HOH
61
448
2.09
1_555
4_455
1
X
ASP
39
-168.27
-141.65
1
X
SER
132
-102.22
70.08
1
X
SER
207
61.00
62.07
1
X
SER
216
-113.57
-162.80
1
X
ASN
270
-112.21
79.27
13.691
-0.120
0.000
0.000
-0.120
0.000
0.240
0.943
0.927
0.218
0.182
0.184
1.800
35.02
1156
22598
5.100
98.820
2.626
0.083
RANDOM
1
THROUGHOUT
0.00
MOLECULAR REPLACEMENT
0.141
0.129
0.800
0.800
1.200
MAXIMUM LIKELIHOOD
MASK
1.800
35.02
198
2220
1
0
2021
0.012
0.021
2062
1.358
1.938
2804
5.685
5.000
278
38.502
23.704
81
13.858
15.000
296
17.183
15.000
11
0.093
0.200
311
0.006
0.020
1593
0.226
0.300
1061
0.315
0.500
1456
0.210
0.500
287
0.161
0.500
3
0.416
0.300
84
0.451
0.500
34
1.218
2.000
1393
1.941
3.000
2176
1.726
2.000
765
2.401
3.000
628
0.307
0.216
1.847
104
1481
1585
20
96.060
1.800
56.614
3DE4
22616
0.099
0.099
1
6.600
4.700
99.200
0.457
1.80
1.90
1.6
14026
3193
0.457
4.40
98.00
data reduction
A.G.W. Leslie
andrew@mrc-lmb.cam.ac.uk
http://www.mrc-lmb.cam.ac.uk/harry/mosflm/
MOSFLM
package
data scaling
Phil Evans
pre@mrc-lmb.cam.ac.uk
21/9/2006
Fortran_77
http://www.ccp4.ac.uk/dist/html/INDEX.html
SCALA
other
3.2.25
refinement
Murshudov, G.N.
ccp4@dl.ac.uk
Fortran_77
http://www.ccp4.ac.uk/main.html
REFMAC
program
data extraction
PDB
sw-help@rcsb.rutgers.edu
September 10, 2007
C++
http://pdb.rutgers.edu/software/
PDB_EXTRACT
package
3.005
data collection
ADSC
Quantum
Proteinase K (E.C.3.4.21.64)
Proteinase K by Classical hanging drop method after the first step of high X-Ray dose on ESRF ID23-1 beamline
1
N
N
2
N
N
3
N
N
X
PRO
7
A
PRO
7
HELX_P
X
SER
14
A
SER
14
1
1
8
X
HIS
46
A
HIS
46
HELX_P
X
GLU
50
A
GLU
50
5
2
5
X
GLY
68
A
GLY
68
HELX_P
X
SER
79
A
SER
79
1
3
12
X
GLN
103
A
GLN
103
HELX_P
X
LYS
118
A
LYS
118
1
4
16
X
ASN
119
A
ASN
119
HELX_P
X
ARG
121
A
ARG
121
5
5
3
X
SER
138
A
SER
138
HELX_P
X
SER
151
A
SER
151
1
6
14
X
ASP
165
A
ASP
165
HELX_P
X
ARG
167
A
ARG
167
5
7
3
X
GLY
222
A
GLY
222
HELX_P
X
LEU
240
A
LEU
240
1
8
19
X
SER
247
A
SER
247
HELX_P
X
THR
255
A
THR
255
1
9
9
disulf
2.007
X
CYS
34
A
SG
CYS
34
1_555
X
CYS
123
A
SG
CYS
123
1_555
disulf
2.081
X
CYS
178
A
SG
CYS
178
1_555
X
CYS
249
A
SG
CYS
249
1_555
metalc
2.623
X
PRO
175
A
O
PRO
175
1_555
X
CA
281
B
CA
CA
1_555
metalc
2.804
X
CA
281
B
CA
CA
1_555
X
HOH
309
C
O
HOH
1_555
metalc
2.415
X
CA
281
B
CA
CA
1_555
X
HOH
383
C
O
HOH
1_555
metalc
2.190
X
CA
281
B
CA
CA
1_555
X
HOH
374
C
O
HOH
1_555
HYDROLASE
Alpha Beta protein, HYDROLASE, Calcium, Metal-binding, Protease, Serine protease, Zymogen
X
SER
170
A
SER
170
1
X
PRO
171
A
PRO
171
-0.18
PRTK_TRIAL
UNP
1
106
P06873
AAQTNAPWGLARISSTSPGTSTYYYDESAGQGSCVYVIDTGIEASHPEFEGRAQMVKTYYYSSRDGNGHGTHCAGTVGSR
TYGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGGYSSSVNSAAARLQSSGVMVAVAAG
NNNADARNYSPASEPSVCTVGASDRYDRRSSFSNYGSVLDIFGPGTSILSTWIGGSTRSISGTSMATPHVAGLAAYLMTL
GKTTAASACRYIADTANKGDLSNIPFGTVNLLAYNNYQA
106
384
3DE4
1
279
P06873
X
1
1
279
2
7
2
2
2
anti-parallel
parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
X
ALA
2
A
ALA
2
X
GLN
3
A
GLN
3
X
TYR
23
A
TYR
23
X
TYR
24
A
TYR
24
X
ALA
53
A
ALA
53
X
THR
58
A
THR
58
X
GLN
89
A
GLN
89
X
LYS
94
A
LYS
94
X
SER
33
A
SER
33
X
ASP
39
A
ASP
39
X
GLY
126
A
GLY
126
X
LEU
131
A
LEU
131
X
VAL
153
A
VAL
153
X
ALA
158
A
ALA
158
X
CYS
178
A
CYS
178
X
SER
183
A
SER
183
X
ILE
201
A
ILE
201
X
PRO
204
A
PRO
204
X
GLY
135
A
GLY
135
X
GLY
136
A
GLY
136
X
TYR
169
A
TYR
169
X
SER
170
A
SER
170
X
ILE
208
A
ILE
208
X
TRP
212
A
TRP
212
X
SER
216
A
SER
216
X
ILE
220
A
ILE
220
X
ASN
257
A
ASN
257
X
LYS
258
A
LYS
258
X
LEU
271
A
LEU
271
X
LEU
272
A
LEU
272
BINDING SITE FOR RESIDUE CA X 281
Software
5
X
PRO
175
A
PRO
175
5
1_555
X
HOH
309
C
HOH
5
1_555
X
HOH
321
C
HOH
5
1_555
X
HOH
374
C
HOH
5
1_555
X
HOH
383
C
HOH
5
1_555
96
P 43 21 2