0.022807 0.000000 0.000000 0.000000 0.011669 0.000000 0.000000 0.000000 0.015509 0.00000 0.00000 0.00000 Cendron, L. Zanotti, G. Folli, C. Berni, R. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 43.846 85.694 64.478 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N O N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N N N 108 N C N 109 N C N 110 N O N 111 N O N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N N N 118 S C N 119 N C N 120 N O N 121 N C Y 122 N C Y 123 N N Y 124 N C Y 125 N C Y 126 N N N 127 N O N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N O N 139 N H N 140 N H N 141 N N N 142 S C N 143 N C N 144 N O N 145 S C N 146 N C N 147 N C N 148 N C N 149 N O N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N N N 164 S C N 165 N C N 166 N O N 167 N C N 168 N C N 169 N C N 170 N C N 171 N O N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N N N 186 S C N 187 N C N 188 N O N 189 N C N 190 N C N 191 N C N 192 N C N 193 N N N 194 N O N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N N N 211 S C N 212 N C N 213 N O N 214 N C N 215 N C N 216 N S N 217 N C N 218 N O N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C Y 235 N C Y 236 N C Y 237 N C Y 238 N C Y 239 N C Y 240 N C N 241 N O N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N N N 254 S C N 255 N C N 256 N O N 257 N C N 258 N C N 259 N C N 260 N O N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N N N 271 S C N 272 N C N 273 N O N 274 N C N 275 N O N 276 N O N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N N N 285 S C N 286 N C N 287 N O N 288 R C N 289 N O N 290 N C N 291 N O N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N N N 302 S C N 303 N C N 304 N O N 305 N C Y 306 N C Y 307 N C Y 308 N C Y 309 N N Y 310 N C Y 311 N C Y 312 N C Y 313 N C Y 314 N C N 315 N O N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N N N 329 S C N 330 N C N 331 N O N 332 N C Y 333 N C Y 334 N C Y 335 N C Y 336 N C Y 337 N C Y 338 N C N 339 N O N 340 N O N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N N N 353 S C N 354 N C N 355 N O N 356 N C N 357 N C N 358 N C N 359 N O N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N doub N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing Y 121 N sing Y 122 N doub Y 123 N doub N 124 N sing Y 125 N sing N 126 N sing Y 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N doub N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N doub N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N doub N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N doub N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing Y 229 N doub Y 230 N sing Y 231 N sing N 232 N sing Y 233 N doub N 234 N sing Y 235 N doub N 236 N sing Y 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N doub N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N doub N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N doub N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N doub N 294 N sing N 295 N sing N 296 N sing N 297 N sing Y 298 N doub Y 299 N sing Y 300 N sing N 301 N sing Y 302 N doub Y 303 N sing Y 304 N sing N 305 N sing Y 306 N sing Y 307 N doub N 308 N sing Y 309 N doub N 310 N sing Y 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N doub N 322 N sing N 323 N sing N 324 N sing N 325 N sing Y 326 N doub Y 327 N sing Y 328 N sing N 329 N sing Y 330 N doub N 331 N sing Y 332 N doub N 333 N sing Y 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N doub N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing US J.Biol.Chem. JBCHA3 0071 0021-9258 284 25832 25841 10.1074/jbc.M109.017657 19602727 Amyloidogenic potential of transthyretin variants: insights from structural and computational analyses. 2009 UK J.Mol.Biol. JMOBAK 0070 0022-2836 366 711 10.1016/j.jmb.2006.11.076 17196219 Acidic Ph-Induced Conformational Changes in Amyloidogenic Mutant Transthyretin. 2007 UK J.Mol.Biol. JMOBAK 0070 0022-2836 302 649 10.1006/jmbi.2000.4078 10986125 A Comparative Analysis of 23 Structures of the Amyloidogenic Protein Transthyretin. 2000 10.2210/pdb3djs/pdb pdb_00003djs 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2006-09-30 ADSC QUANTUM 315 SINGLE WAVELENGTH M x-ray 1 0.979 1.0 ID23-1 ESRF 0.979 SYNCHROTRON ESRF BEAMLINE ID23-1 13802.350 Transthyretin L58H 2 man polymer 18.015 water 184 nat water Prealbumin, TBPA, TTR, ATTR no no GPTGTGESKCPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGHTTEEEFVEGIYKVEIDTKSYWK ALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYSTTAVVTNPKE GPTGTGESKCPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGHTTEEEFVEGIYKVEIDTKSYWK ALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYSTTAVVTNPKE A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample 9606 HOMO SAPIENS 562 ESCHERICHIA COLI BL21 (DE3) PLASMID 1 2.19 43.94 VAPOR DIFFUSION 4.6 32% PEG 2000, 0.1M NaAc, 0.2M Am2SO4 , pH 4.6, VAPOR DIFFUSION, temperature 295K 295 database_2 struct_ref_seq_dif chem_comp_atom chem_comp_bond pdbx_initial_refinement_model repository Initial release Version format compliance Database references Database references Data collection Refinement description 1 0 2009-07-14 1 1 2011-07-13 1 2 2014-03-05 1 3 2021-11-10 1 4 2023-11-01 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details Wild type TTR TTR I84A variant TTR I84A variant TTR L58H variant at neutral pH TTR V30M variant at acidic pH TTR L55P variant at neutral pH TTR L55P variant at acidic pH TTR Y114H variant at acidic pH RCSB Y PDBJ 2008-06-24 REL REL HOH water 1F41 PDB experimental model HOH 1 2 HOH HOH 128 A HOH 2 2 HOH HOH 129 A HOH 4 2 HOH HOH 130 A HOH 5 2 HOH HOH 131 A HOH 6 2 HOH HOH 132 A HOH 8 2 HOH HOH 133 A HOH 12 2 HOH HOH 134 A HOH 13 2 HOH HOH 135 A HOH 15 2 HOH HOH 136 A HOH 17 2 HOH HOH 137 A HOH 18 2 HOH HOH 138 A HOH 19 2 HOH HOH 139 A HOH 20 2 HOH HOH 140 A HOH 21 2 HOH HOH 141 A HOH 22 2 HOH HOH 142 A HOH 24 2 HOH HOH 143 A HOH 25 2 HOH HOH 144 A HOH 26 2 HOH HOH 145 A HOH 28 2 HOH HOH 146 A HOH 29 2 HOH HOH 147 A HOH 30 2 HOH HOH 148 A HOH 31 2 HOH HOH 149 A HOH 33 2 HOH HOH 150 A HOH 35 2 HOH HOH 151 A HOH 36 2 HOH HOH 152 A HOH 39 2 HOH HOH 153 A HOH 40 2 HOH HOH 154 A HOH 42 2 HOH HOH 155 A HOH 44 2 HOH HOH 156 A HOH 51 2 HOH HOH 157 A HOH 53 2 HOH HOH 158 A HOH 54 2 HOH HOH 159 A HOH 55 2 HOH HOH 160 A HOH 57 2 HOH HOH 161 A HOH 58 2 HOH HOH 162 A HOH 59 2 HOH HOH 163 A HOH 61 2 HOH HOH 164 A HOH 62 2 HOH HOH 165 A HOH 63 2 HOH HOH 166 A HOH 65 2 HOH HOH 167 A HOH 66 2 HOH HOH 168 A HOH 68 2 HOH HOH 169 A HOH 69 2 HOH HOH 170 A HOH 70 2 HOH HOH 171 A HOH 72 2 HOH HOH 172 A HOH 74 2 HOH HOH 173 A HOH 75 2 HOH HOH 174 A HOH 76 2 HOH HOH 175 A HOH 77 2 HOH HOH 176 A HOH 78 2 HOH HOH 177 A HOH 79 2 HOH HOH 178 A HOH 80 2 HOH HOH 179 A HOH 82 2 HOH HOH 180 A HOH 84 2 HOH HOH 181 A HOH 86 2 HOH HOH 182 A HOH 87 2 HOH HOH 183 A HOH 88 2 HOH HOH 184 A HOH 89 2 HOH HOH 185 A HOH 90 2 HOH HOH 186 A HOH 93 2 HOH HOH 187 A HOH 97 2 HOH HOH 188 A HOH 98 2 HOH HOH 189 A HOH 101 2 HOH HOH 190 A HOH 103 2 HOH HOH 191 A HOH 104 2 HOH HOH 192 A HOH 108 2 HOH HOH 193 A HOH 109 2 HOH HOH 194 A HOH 110 2 HOH HOH 195 A HOH 111 2 HOH HOH 196 A HOH 113 2 HOH HOH 197 A HOH 114 2 HOH HOH 198 A HOH 115 2 HOH HOH 199 A HOH 116 2 HOH HOH 200 A HOH 118 2 HOH HOH 201 A HOH 119 2 HOH HOH 202 A HOH 120 2 HOH HOH 203 A HOH 122 2 HOH HOH 204 A HOH 126 2 HOH HOH 205 A HOH 130 2 HOH HOH 206 A HOH 134 2 HOH HOH 207 A HOH 135 2 HOH HOH 208 A HOH 136 2 HOH HOH 209 A HOH 137 2 HOH HOH 210 A HOH 139 2 HOH HOH 211 A HOH 144 2 HOH HOH 212 A HOH 146 2 HOH HOH 213 A HOH 147 2 HOH HOH 214 A HOH 148 2 HOH HOH 215 A HOH 149 2 HOH HOH 216 A HOH 151 2 HOH HOH 217 A HOH 152 2 HOH HOH 218 A HOH 153 2 HOH HOH 219 A HOH 154 2 HOH HOH 220 A HOH 155 2 HOH HOH 221 A HOH 156 2 HOH HOH 222 A HOH 157 2 HOH HOH 223 A HOH 158 2 HOH HOH 224 A HOH 161 2 HOH HOH 225 A HOH 163 2 HOH HOH 226 A HOH 165 2 HOH HOH 227 A HOH 166 2 HOH HOH 228 A HOH 169 2 HOH HOH 229 A HOH 170 2 HOH HOH 230 A HOH 171 2 HOH HOH 231 A HOH 173 2 HOH HOH 232 A HOH 174 2 HOH HOH 233 A HOH 176 2 HOH HOH 234 A HOH 177 2 HOH HOH 235 A HOH 180 2 HOH HOH 236 A HOH 181 2 HOH HOH 237 A HOH 183 2 HOH HOH 238 A HOH 143 2 HOH HOH 239 A HOH 184 2 HOH HOH 240 A HOH 3 2 HOH HOH 128 B HOH 7 2 HOH HOH 129 B HOH 9 2 HOH HOH 130 B HOH 10 2 HOH HOH 131 B HOH 11 2 HOH HOH 132 B HOH 14 2 HOH HOH 133 B HOH 16 2 HOH HOH 134 B HOH 23 2 HOH HOH 135 B HOH 27 2 HOH HOH 136 B HOH 32 2 HOH HOH 137 B HOH 34 2 HOH HOH 138 B HOH 37 2 HOH HOH 139 B HOH 38 2 HOH HOH 140 B HOH 41 2 HOH HOH 141 B HOH 43 2 HOH HOH 142 B HOH 45 2 HOH HOH 143 B HOH 46 2 HOH HOH 144 B HOH 47 2 HOH HOH 145 B HOH 48 2 HOH HOH 146 B HOH 49 2 HOH HOH 147 B HOH 50 2 HOH HOH 148 B HOH 52 2 HOH HOH 149 B HOH 56 2 HOH HOH 150 B HOH 60 2 HOH HOH 151 B HOH 64 2 HOH HOH 152 B HOH 67 2 HOH HOH 153 B HOH 71 2 HOH HOH 154 B HOH 73 2 HOH HOH 155 B HOH 81 2 HOH HOH 156 B HOH 83 2 HOH HOH 157 B HOH 85 2 HOH HOH 158 B HOH 91 2 HOH HOH 159 B HOH 92 2 HOH HOH 160 B HOH 94 2 HOH HOH 161 B HOH 95 2 HOH HOH 162 B HOH 96 2 HOH HOH 163 B HOH 99 2 HOH HOH 164 B HOH 100 2 HOH HOH 165 B HOH 102 2 HOH HOH 166 B HOH 105 2 HOH HOH 167 B HOH 106 2 HOH HOH 168 B HOH 107 2 HOH HOH 169 B HOH 112 2 HOH HOH 170 B HOH 117 2 HOH HOH 171 B HOH 121 2 HOH HOH 172 B HOH 123 2 HOH HOH 173 B HOH 124 2 HOH HOH 174 B HOH 125 2 HOH HOH 175 B HOH 127 2 HOH HOH 176 B HOH 128 2 HOH HOH 177 B HOH 129 2 HOH HOH 178 B HOH 131 2 HOH HOH 179 B HOH 132 2 HOH HOH 180 B HOH 133 2 HOH HOH 181 B HOH 138 2 HOH HOH 182 B HOH 140 2 HOH HOH 183 B HOH 141 2 HOH HOH 184 B HOH 142 2 HOH HOH 185 B HOH 145 2 HOH HOH 187 B HOH 150 2 HOH HOH 188 B HOH 159 2 HOH HOH 189 B HOH 160 2 HOH HOH 190 B HOH 162 2 HOH HOH 191 B HOH 164 2 HOH HOH 192 B HOH 167 2 HOH HOH 193 B HOH 168 2 HOH HOH 194 B HOH 172 2 HOH HOH 195 B HOH 175 2 HOH HOH 196 B HOH 178 2 HOH HOH 197 B HOH 179 2 HOH HOH 198 B HOH 182 2 HOH HOH 199 B n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A n 6 6 A n 7 7 A n 8 8 A n 9 9 A CYS 10 n 10 CYS 10 A PRO 11 n 11 PRO 11 A LEU 12 n 12 LEU 12 A MET 13 n 13 MET 13 A VAL 14 n 14 VAL 14 A LYS 15 n 15 LYS 15 A VAL 16 n 16 VAL 16 A LEU 17 n 17 LEU 17 A ASP 18 n 18 ASP 18 A ALA 19 n 19 ALA 19 A VAL 20 n 20 VAL 20 A ARG 21 n 21 ARG 21 A GLY 22 n 22 GLY 22 A SER 23 n 23 SER 23 A PRO 24 n 24 PRO 24 A ALA 25 n 25 ALA 25 A ILE 26 n 26 ILE 26 A ASN 27 n 27 ASN 27 A VAL 28 n 28 VAL 28 A ALA 29 n 29 ALA 29 A VAL 30 n 30 VAL 30 A HIS 31 n 31 HIS 31 A VAL 32 n 32 VAL 32 A PHE 33 n 33 PHE 33 A ARG 34 n 34 ARG 34 A LYS 35 n 35 LYS 35 A ALA 36 n 36 ALA 36 A ALA 37 n 37 ALA 37 A ASP 38 n 38 ASP 38 A ASP 39 n 39 ASP 39 A THR 40 n 40 THR 40 A TRP 41 n 41 TRP 41 A GLU 42 n 42 GLU 42 A PRO 43 n 43 PRO 43 A PHE 44 n 44 PHE 44 A ALA 45 n 45 ALA 45 A SER 46 n 46 SER 46 A GLY 47 n 47 GLY 47 A LYS 48 n 48 LYS 48 A THR 49 n 49 THR 49 A SER 50 n 50 SER 50 A GLU 51 n 51 GLU 51 A SER 52 n 52 SER 52 A GLY 53 n 53 GLY 53 A GLU 54 n 54 GLU 54 A LEU 55 n 55 LEU 55 A HIS 56 n 56 HIS 56 A GLY 57 n 57 GLY 57 A HIS 58 n 58 HIS 58 A THR 59 n 59 THR 59 A THR 60 n 60 THR 60 A GLU 61 n 61 GLU 61 A GLU 62 n 62 GLU 62 A GLU 63 n 63 GLU 63 A PHE 64 n 64 PHE 64 A VAL 65 n 65 VAL 65 A GLU 66 n 66 GLU 66 A GLY 67 n 67 GLY 67 A ILE 68 n 68 ILE 68 A TYR 69 n 69 TYR 69 A LYS 70 n 70 LYS 70 A VAL 71 n 71 VAL 71 A GLU 72 n 72 GLU 72 A ILE 73 n 73 ILE 73 A ASP 74 n 74 ASP 74 A THR 75 n 75 THR 75 A LYS 76 n 76 LYS 76 A SER 77 n 77 SER 77 A TYR 78 n 78 TYR 78 A TRP 79 n 79 TRP 79 A LYS 80 n 80 LYS 80 A ALA 81 n 81 ALA 81 A LEU 82 n 82 LEU 82 A GLY 83 n 83 GLY 83 A ILE 84 n 84 ILE 84 A SER 85 n 85 SER 85 A PRO 86 n 86 PRO 86 A PHE 87 n 87 PHE 87 A HIS 88 n 88 HIS 88 A GLU 89 n 89 GLU 89 A HIS 90 n 90 HIS 90 A ALA 91 n 91 ALA 91 A GLU 92 n 92 GLU 92 A VAL 93 n 93 VAL 93 A VAL 94 n 94 VAL 94 A PHE 95 n 95 PHE 95 A THR 96 n 96 THR 96 A ALA 97 n 97 ALA 97 A ASN 98 n 98 ASN 98 A ASP 99 n 99 ASP 99 A SER 100 n 100 SER 100 A GLY 101 n 101 GLY 101 A PRO 102 n 102 PRO 102 A ARG 103 n 103 ARG 103 A ARG 104 n 104 ARG 104 A TYR 105 n 105 TYR 105 A THR 106 n 106 THR 106 A ILE 107 n 107 ILE 107 A ALA 108 n 108 ALA 108 A ALA 109 n 109 ALA 109 A LEU 110 n 110 LEU 110 A LEU 111 n 111 LEU 111 A SER 112 n 112 SER 112 A PRO 113 n 113 PRO 113 A TYR 114 n 114 TYR 114 A SER 115 n 115 SER 115 A TYR 116 n 116 TYR 116 A SER 117 n 117 SER 117 A THR 118 n 118 THR 118 A THR 119 n 119 THR 119 A ALA 120 n 120 ALA 120 A VAL 121 n 121 VAL 121 A VAL 122 n 122 VAL 122 A THR 123 n 123 THR 123 A ASN 124 n 124 ASN 124 A PRO 125 n 125 PRO 125 A n 126 126 A n 127 127 A n 1 1 B n 2 2 B n 3 3 B n 4 4 B n 5 5 B n 6 6 B n 7 7 B n 8 8 B n 9 9 B CYS 10 n 10 CYS 10 B PRO 11 n 11 PRO 11 B LEU 12 n 12 LEU 12 B MET 13 n 13 MET 13 B VAL 14 n 14 VAL 14 B LYS 15 n 15 LYS 15 B VAL 16 n 16 VAL 16 B LEU 17 n 17 LEU 17 B ASP 18 n 18 ASP 18 B ALA 19 n 19 ALA 19 B VAL 20 n 20 VAL 20 B ARG 21 n 21 ARG 21 B GLY 22 n 22 GLY 22 B SER 23 n 23 SER 23 B PRO 24 n 24 PRO 24 B ALA 25 n 25 ALA 25 B ILE 26 n 26 ILE 26 B ASN 27 n 27 ASN 27 B VAL 28 n 28 VAL 28 B ALA 29 n 29 ALA 29 B VAL 30 n 30 VAL 30 B HIS 31 n 31 HIS 31 B VAL 32 n 32 VAL 32 B PHE 33 n 33 PHE 33 B ARG 34 n 34 ARG 34 B LYS 35 n 35 LYS 35 B ALA 36 n 36 ALA 36 B ALA 37 n 37 ALA 37 B ASP 38 n 38 ASP 38 B ASP 39 n 39 ASP 39 B THR 40 n 40 THR 40 B TRP 41 n 41 TRP 41 B GLU 42 n 42 GLU 42 B PRO 43 n 43 PRO 43 B PHE 44 n 44 PHE 44 B ALA 45 n 45 ALA 45 B SER 46 n 46 SER 46 B GLY 47 n 47 GLY 47 B LYS 48 n 48 LYS 48 B THR 49 n 49 THR 49 B SER 50 n 50 SER 50 B GLU 51 n 51 GLU 51 B SER 52 n 52 SER 52 B GLY 53 n 53 GLY 53 B GLU 54 n 54 GLU 54 B LEU 55 n 55 LEU 55 B HIS 56 n 56 HIS 56 B GLY 57 n 57 GLY 57 B HIS 58 n 58 HIS 58 B THR 59 n 59 THR 59 B THR 60 n 60 THR 60 B GLU 61 n 61 GLU 61 B GLU 62 n 62 GLU 62 B GLU 63 n 63 GLU 63 B PHE 64 n 64 PHE 64 B VAL 65 n 65 VAL 65 B GLU 66 n 66 GLU 66 B GLY 67 n 67 GLY 67 B ILE 68 n 68 ILE 68 B TYR 69 n 69 TYR 69 B LYS 70 n 70 LYS 70 B VAL 71 n 71 VAL 71 B GLU 72 n 72 GLU 72 B ILE 73 n 73 ILE 73 B ASP 74 n 74 ASP 74 B THR 75 n 75 THR 75 B LYS 76 n 76 LYS 76 B SER 77 n 77 SER 77 B TYR 78 n 78 TYR 78 B TRP 79 n 79 TRP 79 B LYS 80 n 80 LYS 80 B ALA 81 n 81 ALA 81 B LEU 82 n 82 LEU 82 B GLY 83 n 83 GLY 83 B ILE 84 n 84 ILE 84 B SER 85 n 85 SER 85 B PRO 86 n 86 PRO 86 B PHE 87 n 87 PHE 87 B HIS 88 n 88 HIS 88 B GLU 89 n 89 GLU 89 B HIS 90 n 90 HIS 90 B ALA 91 n 91 ALA 91 B GLU 92 n 92 GLU 92 B VAL 93 n 93 VAL 93 B VAL 94 n 94 VAL 94 B PHE 95 n 95 PHE 95 B THR 96 n 96 THR 96 B ALA 97 n 97 ALA 97 B ASN 98 n 98 ASN 98 B ASP 99 n 99 ASP 99 B SER 100 n 100 SER 100 B GLY 101 n 101 GLY 101 B PRO 102 n 102 PRO 102 B ARG 103 n 103 ARG 103 B ARG 104 n 104 ARG 104 B TYR 105 n 105 TYR 105 B THR 106 n 106 THR 106 B ILE 107 n 107 ILE 107 B ALA 108 n 108 ALA 108 B ALA 109 n 109 ALA 109 B LEU 110 n 110 LEU 110 B LEU 111 n 111 LEU 111 B SER 112 n 112 SER 112 B PRO 113 n 113 PRO 113 B TYR 114 n 114 TYR 114 B SER 115 n 115 SER 115 B TYR 116 n 116 TYR 116 B SER 117 n 117 SER 117 B THR 118 n 118 THR 118 B THR 119 n 119 THR 119 B ALA 120 n 120 ALA 120 B VAL 121 n 121 VAL 121 B VAL 122 n 122 VAL 122 B THR 123 n 123 THR 123 B ASN 124 n 124 ASN 124 B PRO 125 n 125 PRO 125 B n 126 126 B n 127 127 B author_and_software_defined_assembly PISA 4 tetrameric 6270 -47 19480 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_665 -x+1,-y+1,z crystal symmetry operation 43.8460000000 85.6940000000 0.0000000000 A O SER 23 A O SER 23 A N ASP 18 A N ASP 18 A N LEU 17 A N LEU 17 A O LEU 111 A O LEU 111 A N ALA 108 A N ALA 108 A O THR 119 A O THR 119 A N THR 118 A N THR 118 B O TYR 116 B O TYR 116 B O THR 119 B O THR 119 B N ALA 108 B N ALA 108 B O LEU 111 B O LEU 111 B N LEU 17 B N LEU 17 B N ASP 18 B N ASP 18 B O SER 23 B O SER 23 A O SER 23 A O SER 23 A N ASP 18 A N ASP 18 A N LEU 17 A N LEU 17 A O LEU 111 A O LEU 111 A N ALA 108 A N ALA 108 A O THR 119 A O THR 119 A N THR 118 A N THR 118 B O TYR 116 B O TYR 116 B O THR 119 B O THR 119 B N ALA 108 B N ALA 108 B O LEU 111 B O LEU 111 B N LEU 17 B N LEU 17 B N VAL 14 B N VAL 14 B O LEU 55 B O LEU 55 A O ALA 45 A O ALA 45 A N VAL 32 A N VAL 32 A N HIS 31 A N HIS 31 A O GLU 72 A O GLU 72 A N TYR 69 A N TYR 69 A O PHE 95 A O PHE 95 A N VAL 94 A N VAL 94 B O GLU 89 B O GLU 89 B O ALA 91 B O ALA 91 B N ILE 73 B N ILE 73 B O GLU 72 B O GLU 72 B N HIS 31 B N HIS 31 B N VAL 32 B N VAL 32 B O ALA 45 B O ALA 45 1 A HOH 202 C HOH 1 B HOH 162 D HOH 1 A GLY 1 A GLY 1 1 Y 1 A PRO 2 A PRO 2 1 Y 1 A THR 3 A THR 3 1 Y 1 A GLY 4 A GLY 4 1 Y 1 A THR 5 A THR 5 1 Y 1 A GLY 6 A GLY 6 1 Y 1 A GLU 7 A GLU 7 1 Y 1 A SER 8 A SER 8 1 Y 1 A LYS 9 A LYS 9 1 Y 1 A LYS 126 A LYS 126 1 Y 1 A GLU 127 A GLU 127 1 Y 1 B GLY 1 B GLY 1 1 Y 1 B PRO 2 B PRO 2 1 Y 1 B THR 3 B THR 3 1 Y 1 B GLY 4 B GLY 4 1 Y 1 B THR 5 B THR 5 1 Y 1 B GLY 6 B GLY 6 1 Y 1 B GLU 7 B GLU 7 1 Y 1 B SER 8 B SER 8 1 Y 1 B LYS 9 B LYS 9 1 Y 1 B LYS 126 B LYS 126 1 Y 1 B GLU 127 B GLU 127 1 Y 1 A A O O CYS HOH 10 158 2.06 1 A A O O LEU HOH 55 157 2.17 1 B B CB OG SER SER 100 100 0.089 0.013 1.418 1.507 N 1 A ASP 39 82.12 1.92 1 B ASP 38 -86.10 33.08 1 B PRO 43 -31.75 141.31 1 B PHE 44 -137.29 -37.39 1 B SER 100 87.44 13.10 26.831 -0.12 0.00 0.00 0.07 0.00 0.05 0.935 0.935 0.21742 0.2041 0.20478 1.80 64.42 1184 23052 23052 5.1 99.28 2.215 0.070 RANDOM 1 THROUGHOUT 0 0 MOLECULAR REPLACEMENT 0.141 0.120 0.80 0.80 1.20 1F41 MAXIMUM LIKELIHOOD MASK 1.80 64.42 184 1980 0 0 1796 0.013 0.022 1846 1.464 1.938 2520 5.690 5.000 230 31.160 23.590 78 17.571 15.000 278 19.148 15.000 8 0.097 0.200 284 0.006 0.020 1410 0.238 0.200 799 0.316 0.200 1235 0.190 0.200 148 0.243 0.200 68 0.094 0.200 15 3.179 2.000 1177 4.691 3.000 1880 8.003 2.000 757 9.957 3.000 640 0.272 0.278 1.847 88 1624 20 100.00 1.8 64.42 3DJS 23088 23088 0 0 0.103 1 16.4 6.7 99.4 0.342 1.8 1.9 5.3 3343 1 7.0 100 refinement REFMAC 5.2.0005 data collection ADSC Quantum data reduction MOSFLM data scaling SCALA phasing PHASES N Crystal structure of transthyretin variant L58H at acidic pH 1 N N 1 N N 2 N N 2 N N A ASP 74 A ASP 74 HELX_P A LEU 82 A LEU 82 1 1 9 B ASP 74 B ASP 74 HELX_P B LEU 82 B LEU 82 1 2 9 TRANSPORT PROTEIN TTR, AMYLOID FIBRILS, POINT MUTATION, TRANSPORT PROTEIN, Amyloid, Disease mutation, Gamma-carboxyglutamic acid, Glycoprotein, Hormone, Polyneuropathy, Retinol-binding, Secreted, Thyroid hormone, Transport, Vitamin A TTHY_HUMAN UNP 1 21 P02766 GPTGTGESKCPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSYWK ALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYSTTAVVTNPKE 21 147 3DJS 1 127 P02766 A 1 1 127 21 147 3DJS 1 127 P02766 B 1 1 127 1 LEU engineered mutation HIS 58 3DJS A P02766 UNP 78 58 2 LEU engineered mutation HIS 58 3DJS B P02766 UNP 78 58 8 8 8 anti-parallel parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A SER 23 A SER 23 A PRO 24 A PRO 24 A LEU 12 A LEU 12 A ASP 18 A ASP 18 A ARG 104 A ARG 104 A SER 112 A SER 112 A SER 115 A SER 115 A THR 123 A THR 123 B SER 115 B SER 115 B THR 123 B THR 123 B ARG 104 B ARG 104 B SER 112 B SER 112 B LEU 12 B LEU 12 B ASP 18 B ASP 18 B SER 23 B SER 23 B PRO 24 B PRO 24 A SER 23 A SER 23 A PRO 24 A PRO 24 A LEU 12 A LEU 12 A ASP 18 A ASP 18 A ARG 104 A ARG 104 A SER 112 A SER 112 A SER 115 A SER 115 A THR 123 A THR 123 B SER 115 B SER 115 B THR 123 B THR 123 B ARG 104 B ARG 104 B SER 112 B SER 112 B LEU 12 B LEU 12 B ASP 18 B ASP 18 B GLU 54 B GLU 54 B LEU 55 B LEU 55 A TRP 41 A TRP 41 A LYS 48 A LYS 48 A ALA 29 A ALA 29 A LYS 35 A LYS 35 A GLY 67 A GLY 67 A ILE 73 A ILE 73 A ALA 91 A ALA 91 A ALA 97 A ALA 97 B HIS 88 B HIS 88 B ALA 97 B ALA 97 B GLY 67 B GLY 67 B ILE 73 B ILE 73 B ALA 29 B ALA 29 B ALA 36 B ALA 36 B THR 40 B THR 40 B LYS 48 B LYS 48 18 P 21 21 2