0.020255
0.000000
0.000000
0.000000
0.012786
0.000000
0.000000
0.000000
0.006796
0.00000
0.00000
0.00000
Braden, B.C.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.
90.
90.
49.37
78.21
147.15
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be Published
0353
2.8 Angstrom structure of a enzyme deglycosylated human IgG1 Fc fragment
10.2210/pdb3dnk/pdb
pdb_00003dnk
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
Osmic mirrors
IMAGE PLATE
2004-03-15
RIGAKU RAXIS IV
confocal mirrors
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU
24008.123
IGHM protein
UNP residues 267-478
N328D
2
man
polymer
18.015
water
86
nat
water
Human IgG1 antibody Fc fragment-deglycosylated
no
no
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYDSTYRVVSVLTVLHQDWLN
GKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTP
PVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYDSTYRVVSVLTVLHQDWLN
GKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTP
PVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
man
sample
Intact, humanized IgG1 Medi-524 produced in hybridomas.
Fc fragment produced by papain digestion
IGHM
9606
Homo sapiens
10090
mus musculus
mouse NSO cells
1
2.96
58.42
VAPOR DIFFUSION, HANGING DROP
6.4
20% PEG 6000, pH 6.4, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
298.0
database_2
struct_ref_seq_dif
repository
Initial release
Version format compliance
Database references
1
0
2009-07-21
1
1
2011-07-13
1
2
2021-10-20
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
Humanized anti-viral IgG1 Fab fragment
RCSB
Y
RCSB
2008-07-02
REL
REL
HOH
water
WAT
1
2
HOH
HOH
1
A
WAT
2
2
HOH
HOH
2
A
WAT
3
2
HOH
HOH
3
A
WAT
4
2
HOH
HOH
4
A
WAT
5
2
HOH
HOH
5
A
WAT
6
2
HOH
HOH
6
A
WAT
7
2
HOH
HOH
7
A
WAT
8
2
HOH
HOH
8
A
WAT
9
2
HOH
HOH
9
A
WAT
10
2
HOH
HOH
10
A
WAT
11
2
HOH
HOH
11
A
WAT
12
2
HOH
HOH
12
A
WAT
21
2
HOH
HOH
21
A
WAT
22
2
HOH
HOH
22
A
WAT
23
2
HOH
HOH
23
A
WAT
24
2
HOH
HOH
24
A
WAT
28
2
HOH
HOH
28
A
WAT
29
2
HOH
HOH
29
A
WAT
31
2
HOH
HOH
31
A
WAT
40
2
HOH
HOH
40
A
WAT
41
2
HOH
HOH
41
A
WAT
42
2
HOH
HOH
42
A
WAT
44
2
HOH
HOH
44
A
WAT
45
2
HOH
HOH
45
A
WAT
46
2
HOH
HOH
46
A
WAT
47
2
HOH
HOH
47
A
WAT
48
2
HOH
HOH
48
A
WAT
61
2
HOH
HOH
61
A
WAT
62
2
HOH
HOH
62
A
WAT
63
2
HOH
HOH
63
A
WAT
64
2
HOH
HOH
64
A
WAT
74
2
HOH
HOH
74
A
WAT
75
2
HOH
HOH
75
A
WAT
76
2
HOH
HOH
76
A
WAT
77
2
HOH
HOH
77
A
WAT
78
2
HOH
HOH
78
A
WAT
79
2
HOH
HOH
79
A
WAT
80
2
HOH
HOH
80
A
WAT
81
2
HOH
HOH
81
A
WAT
82
2
HOH
HOH
82
A
WAT
83
2
HOH
HOH
83
A
WAT
91
2
HOH
HOH
91
A
WAT
92
2
HOH
HOH
92
A
WAT
93
2
HOH
HOH
93
A
WAT
94
2
HOH
HOH
94
A
WAT
95
2
HOH
HOH
95
A
WAT
96
2
HOH
HOH
96
A
WAT
97
2
HOH
HOH
97
A
WAT
13
2
HOH
HOH
13
B
WAT
15
2
HOH
HOH
15
B
WAT
16
2
HOH
HOH
16
B
WAT
17
2
HOH
HOH
17
B
WAT
18
2
HOH
HOH
18
B
WAT
19
2
HOH
HOH
19
B
WAT
20
2
HOH
HOH
20
B
WAT
32
2
HOH
HOH
32
B
WAT
34
2
HOH
HOH
34
B
WAT
35
2
HOH
HOH
35
B
WAT
36
2
HOH
HOH
36
B
WAT
37
2
HOH
HOH
37
B
WAT
38
2
HOH
HOH
38
B
WAT
39
2
HOH
HOH
39
B
WAT
50
2
HOH
HOH
50
B
WAT
52
2
HOH
HOH
52
B
WAT
53
2
HOH
HOH
53
B
WAT
54
2
HOH
HOH
54
B
WAT
55
2
HOH
HOH
55
B
WAT
56
2
HOH
HOH
56
B
WAT
60
2
HOH
HOH
60
B
WAT
65
2
HOH
HOH
65
B
WAT
67
2
HOH
HOH
67
B
WAT
84
2
HOH
HOH
84
B
WAT
85
2
HOH
HOH
85
B
WAT
86
2
HOH
HOH
86
B
WAT
87
2
HOH
HOH
87
B
WAT
88
2
HOH
HOH
88
B
WAT
89
2
HOH
HOH
89
B
WAT
90
2
HOH
HOH
90
B
WAT
98
2
HOH
HOH
98
B
WAT
99
2
HOH
HOH
99
B
WAT
100
2
HOH
HOH
100
B
WAT
101
2
HOH
HOH
101
B
WAT
102
2
HOH
HOH
102
B
WAT
103
2
HOH
HOH
103
B
WAT
104
2
HOH
HOH
104
B
WAT
105
2
HOH
HOH
105
B
GLY
236
n
1
GLY
236
A
GLY
237
n
2
GLY
237
A
PRO
238
n
3
PRO
238
A
SER
239
n
4
SER
239
A
VAL
240
n
5
VAL
240
A
PHE
241
n
6
PHE
241
A
LEU
242
n
7
LEU
242
A
PHE
243
n
8
PHE
243
A
PRO
244
n
9
PRO
244
A
PRO
245
n
10
PRO
245
A
LYS
246
n
11
LYS
246
A
PRO
247
n
12
PRO
247
A
LYS
248
n
13
LYS
248
A
ASP
249
n
14
ASP
249
A
THR
250
n
15
THR
250
A
LEU
251
n
16
LEU
251
A
MET
252
n
17
MET
252
A
ILE
253
n
18
ILE
253
A
SER
254
n
19
SER
254
A
ARG
255
n
20
ARG
255
A
THR
256
n
21
THR
256
A
PRO
257
n
22
PRO
257
A
GLU
258
n
23
GLU
258
A
VAL
259
n
24
VAL
259
A
THR
260
n
25
THR
260
A
CYS
261
n
26
CYS
261
A
VAL
262
n
27
VAL
262
A
VAL
263
n
28
VAL
263
A
VAL
264
n
29
VAL
264
A
ASP
265
n
30
ASP
265
A
VAL
266
n
31
VAL
266
A
SER
267
n
32
SER
267
A
HIS
268
n
33
HIS
268
A
GLU
269
n
34
GLU
269
A
ASP
270
n
35
ASP
270
A
PRO
271
n
36
PRO
271
A
GLU
272
n
37
GLU
272
A
VAL
273
n
38
VAL
273
A
LYS
274
n
39
LYS
274
A
PHE
275
n
40
PHE
275
A
ASN
276
n
41
ASN
276
A
TRP
277
n
42
TRP
277
A
TYR
278
n
43
TYR
278
A
VAL
279
n
44
VAL
279
A
ASP
280
n
45
ASP
280
A
GLY
281
n
46
GLY
281
A
VAL
282
n
47
VAL
282
A
GLU
283
n
48
GLU
283
A
VAL
284
n
49
VAL
284
A
HIS
285
n
50
HIS
285
A
ASN
286
n
51
ASN
286
A
ALA
287
n
52
ALA
287
A
LYS
288
n
53
LYS
288
A
THR
289
n
54
THR
289
A
LYS
290
n
55
LYS
290
A
PRO
291
n
56
PRO
291
A
ARG
292
n
57
ARG
292
A
GLU
293
n
58
GLU
293
A
GLU
294
n
59
GLU
294
A
GLN
295
n
60
GLN
295
A
TYR
296
n
61
TYR
296
A
ASP
297
n
62
ASP
297
A
SER
298
n
63
SER
298
A
THR
299
n
64
THR
299
A
TYR
300
n
65
TYR
300
A
ARG
301
n
66
ARG
301
A
VAL
302
n
67
VAL
302
A
VAL
303
n
68
VAL
303
A
SER
304
n
69
SER
304
A
VAL
305
n
70
VAL
305
A
LEU
306
n
71
LEU
306
A
THR
307
n
72
THR
307
A
VAL
308
n
73
VAL
308
A
LEU
309
n
74
LEU
309
A
HIS
310
n
75
HIS
310
A
GLN
311
n
76
GLN
311
A
ASP
312
n
77
ASP
312
A
TRP
313
n
78
TRP
313
A
LEU
314
n
79
LEU
314
A
ASN
315
n
80
ASN
315
A
GLY
316
n
81
GLY
316
A
LYS
317
n
82
LYS
317
A
GLU
318
n
83
GLU
318
A
TYR
319
n
84
TYR
319
A
LYS
320
n
85
LYS
320
A
CYS
321
n
86
CYS
321
A
LYS
322
n
87
LYS
322
A
VAL
323
n
88
VAL
323
A
SER
324
n
89
SER
324
A
ASN
325
n
90
ASN
325
A
LYS
326
n
91
LYS
326
A
ALA
327
n
92
ALA
327
A
LEU
328
n
93
LEU
328
A
PRO
329
n
94
PRO
329
A
ALA
330
n
95
ALA
330
A
PRO
331
n
96
PRO
331
A
ILE
332
n
97
ILE
332
A
GLU
333
n
98
GLU
333
A
LYS
334
n
99
LYS
334
A
THR
335
n
100
THR
335
A
ILE
336
n
101
ILE
336
A
SER
337
n
102
SER
337
A
LYS
338
n
103
LYS
338
A
ALA
339
n
104
ALA
339
A
LYS
340
n
105
LYS
340
A
GLY
341
n
106
GLY
341
A
GLN
342
n
107
GLN
342
A
PRO
343
n
108
PRO
343
A
ARG
344
n
109
ARG
344
A
GLU
345
n
110
GLU
345
A
PRO
346
n
111
PRO
346
A
GLN
347
n
112
GLN
347
A
VAL
348
n
113
VAL
348
A
TYR
349
n
114
TYR
349
A
THR
350
n
115
THR
350
A
LEU
351
n
116
LEU
351
A
PRO
352
n
117
PRO
352
A
PRO
353
n
118
PRO
353
A
SER
354
n
119
SER
354
A
ARG
355
n
120
ARG
355
A
GLU
356
n
121
GLU
356
A
GLU
357
n
122
GLU
357
A
MET
358
n
123
MET
358
A
THR
359
n
124
THR
359
A
LYS
360
n
125
LYS
360
A
ASN
361
n
126
ASN
361
A
GLN
362
n
127
GLN
362
A
VAL
363
n
128
VAL
363
A
SER
364
n
129
SER
364
A
LEU
365
n
130
LEU
365
A
THR
366
n
131
THR
366
A
CYS
367
n
132
CYS
367
A
LEU
368
n
133
LEU
368
A
VAL
369
n
134
VAL
369
A
LYS
370
n
135
LYS
370
A
GLY
371
n
136
GLY
371
A
PHE
372
n
137
PHE
372
A
TYR
373
n
138
TYR
373
A
PRO
374
n
139
PRO
374
A
SER
375
n
140
SER
375
A
ASP
376
n
141
ASP
376
A
ILE
377
n
142
ILE
377
A
ALA
378
n
143
ALA
378
A
VAL
379
n
144
VAL
379
A
GLU
380
n
145
GLU
380
A
TRP
381
n
146
TRP
381
A
GLU
382
n
147
GLU
382
A
SER
383
n
148
SER
383
A
ASN
384
n
149
ASN
384
A
GLY
385
n
150
GLY
385
A
GLN
386
n
151
GLN
386
A
PRO
387
n
152
PRO
387
A
GLU
388
n
153
GLU
388
A
ASN
389
n
154
ASN
389
A
ASN
390
n
155
ASN
390
A
TYR
391
n
156
TYR
391
A
LYS
392
n
157
LYS
392
A
THR
393
n
158
THR
393
A
THR
394
n
159
THR
394
A
PRO
395
n
160
PRO
395
A
PRO
396
n
161
PRO
396
A
VAL
397
n
162
VAL
397
A
LEU
398
n
163
LEU
398
A
ASP
399
n
164
ASP
399
A
SER
400
n
165
SER
400
A
ASP
401
n
166
ASP
401
A
GLY
402
n
167
GLY
402
A
SER
403
n
168
SER
403
A
PHE
404
n
169
PHE
404
A
PHE
405
n
170
PHE
405
A
LEU
406
n
171
LEU
406
A
TYR
407
n
172
TYR
407
A
SER
408
n
173
SER
408
A
LYS
409
n
174
LYS
409
A
LEU
410
n
175
LEU
410
A
THR
411
n
176
THR
411
A
VAL
412
n
177
VAL
412
A
ASP
413
n
178
ASP
413
A
LYS
414
n
179
LYS
414
A
SER
415
n
180
SER
415
A
ARG
416
n
181
ARG
416
A
TRP
417
n
182
TRP
417
A
GLN
418
n
183
GLN
418
A
GLN
419
n
184
GLN
419
A
GLY
420
n
185
GLY
420
A
ASN
421
n
186
ASN
421
A
VAL
422
n
187
VAL
422
A
PHE
423
n
188
PHE
423
A
SER
424
n
189
SER
424
A
CYS
425
n
190
CYS
425
A
SER
426
n
191
SER
426
A
VAL
427
n
192
VAL
427
A
MET
428
n
193
MET
428
A
HIS
429
n
194
HIS
429
A
GLU
430
n
195
GLU
430
A
ALA
431
n
196
ALA
431
A
LEU
432
n
197
LEU
432
A
HIS
433
n
198
HIS
433
A
ASN
434
n
199
ASN
434
A
HIS
435
n
200
HIS
435
A
TYR
436
n
201
TYR
436
A
THR
437
n
202
THR
437
A
GLN
438
n
203
GLN
438
A
LYS
439
n
204
LYS
439
A
SER
440
n
205
SER
440
A
LEU
441
n
206
LEU
441
A
SER
442
n
207
SER
442
A
LEU
443
n
208
LEU
443
A
SER
444
n
209
SER
444
A
n
210
445
A
n
211
446
A
n
212
447
A
GLY
1236
n
1
GLY
1236
B
GLY
1237
n
2
GLY
1237
B
PRO
1238
n
3
PRO
1238
B
SER
1239
n
4
SER
1239
B
VAL
1240
n
5
VAL
1240
B
PHE
1241
n
6
PHE
1241
B
LEU
1242
n
7
LEU
1242
B
PHE
1243
n
8
PHE
1243
B
PRO
1244
n
9
PRO
1244
B
PRO
1245
n
10
PRO
1245
B
LYS
1246
n
11
LYS
1246
B
PRO
1247
n
12
PRO
1247
B
LYS
1248
n
13
LYS
1248
B
ASP
1249
n
14
ASP
1249
B
THR
1250
n
15
THR
1250
B
LEU
1251
n
16
LEU
1251
B
MET
1252
n
17
MET
1252
B
ILE
1253
n
18
ILE
1253
B
SER
1254
n
19
SER
1254
B
ARG
1255
n
20
ARG
1255
B
THR
1256
n
21
THR
1256
B
PRO
1257
n
22
PRO
1257
B
GLU
1258
n
23
GLU
1258
B
VAL
1259
n
24
VAL
1259
B
THR
1260
n
25
THR
1260
B
CYS
1261
n
26
CYS
1261
B
VAL
1262
n
27
VAL
1262
B
VAL
1263
n
28
VAL
1263
B
VAL
1264
n
29
VAL
1264
B
ASP
1265
n
30
ASP
1265
B
VAL
1266
n
31
VAL
1266
B
SER
1267
n
32
SER
1267
B
HIS
1268
n
33
HIS
1268
B
GLU
1269
n
34
GLU
1269
B
ASP
1270
n
35
ASP
1270
B
PRO
1271
n
36
PRO
1271
B
GLU
1272
n
37
GLU
1272
B
VAL
1273
n
38
VAL
1273
B
LYS
1274
n
39
LYS
1274
B
PHE
1275
n
40
PHE
1275
B
ASN
1276
n
41
ASN
1276
B
TRP
1277
n
42
TRP
1277
B
TYR
1278
n
43
TYR
1278
B
VAL
1279
n
44
VAL
1279
B
ASP
1280
n
45
ASP
1280
B
GLY
1281
n
46
GLY
1281
B
VAL
1282
n
47
VAL
1282
B
GLU
1283
n
48
GLU
1283
B
VAL
1284
n
49
VAL
1284
B
HIS
1285
n
50
HIS
1285
B
ASN
1286
n
51
ASN
1286
B
ALA
1287
n
52
ALA
1287
B
LYS
1288
n
53
LYS
1288
B
THR
1289
n
54
THR
1289
B
LYS
1290
n
55
LYS
1290
B
PRO
1291
n
56
PRO
1291
B
ARG
1292
n
57
ARG
1292
B
GLU
1293
n
58
GLU
1293
B
GLU
1294
n
59
GLU
1294
B
GLN
1295
n
60
GLN
1295
B
TYR
1296
n
61
TYR
1296
B
ASP
1297
n
62
ASP
1297
B
SER
1298
n
63
SER
1298
B
THR
1299
n
64
THR
1299
B
TYR
1300
n
65
TYR
1300
B
ARG
1301
n
66
ARG
1301
B
VAL
1302
n
67
VAL
1302
B
VAL
1303
n
68
VAL
1303
B
SER
1304
n
69
SER
1304
B
VAL
1305
n
70
VAL
1305
B
LEU
1306
n
71
LEU
1306
B
THR
1307
n
72
THR
1307
B
VAL
1308
n
73
VAL
1308
B
LEU
1309
n
74
LEU
1309
B
HIS
1310
n
75
HIS
1310
B
GLN
1311
n
76
GLN
1311
B
ASP
1312
n
77
ASP
1312
B
TRP
1313
n
78
TRP
1313
B
LEU
1314
n
79
LEU
1314
B
ASN
1315
n
80
ASN
1315
B
GLY
1316
n
81
GLY
1316
B
LYS
1317
n
82
LYS
1317
B
GLU
1318
n
83
GLU
1318
B
TYR
1319
n
84
TYR
1319
B
LYS
1320
n
85
LYS
1320
B
CYS
1321
n
86
CYS
1321
B
LYS
1322
n
87
LYS
1322
B
VAL
1323
n
88
VAL
1323
B
SER
1324
n
89
SER
1324
B
ASN
1325
n
90
ASN
1325
B
LYS
1326
n
91
LYS
1326
B
ALA
1327
n
92
ALA
1327
B
LEU
1328
n
93
LEU
1328
B
PRO
1329
n
94
PRO
1329
B
ALA
1330
n
95
ALA
1330
B
PRO
1331
n
96
PRO
1331
B
ILE
1332
n
97
ILE
1332
B
GLU
1333
n
98
GLU
1333
B
LYS
1334
n
99
LYS
1334
B
THR
1335
n
100
THR
1335
B
ILE
1336
n
101
ILE
1336
B
SER
1337
n
102
SER
1337
B
LYS
1338
n
103
LYS
1338
B
ALA
1339
n
104
ALA
1339
B
LYS
1340
n
105
LYS
1340
B
GLY
1341
n
106
GLY
1341
B
GLN
1342
n
107
GLN
1342
B
PRO
1343
n
108
PRO
1343
B
ARG
1344
n
109
ARG
1344
B
GLU
1345
n
110
GLU
1345
B
PRO
1346
n
111
PRO
1346
B
GLN
1347
n
112
GLN
1347
B
VAL
1348
n
113
VAL
1348
B
TYR
1349
n
114
TYR
1349
B
THR
1350
n
115
THR
1350
B
LEU
1351
n
116
LEU
1351
B
PRO
1352
n
117
PRO
1352
B
PRO
1353
n
118
PRO
1353
B
SER
1354
n
119
SER
1354
B
ARG
1355
n
120
ARG
1355
B
GLU
1356
n
121
GLU
1356
B
GLU
1357
n
122
GLU
1357
B
MET
1358
n
123
MET
1358
B
THR
1359
n
124
THR
1359
B
LYS
1360
n
125
LYS
1360
B
ASN
1361
n
126
ASN
1361
B
GLN
1362
n
127
GLN
1362
B
VAL
1363
n
128
VAL
1363
B
SER
1364
n
129
SER
1364
B
LEU
1365
n
130
LEU
1365
B
THR
1366
n
131
THR
1366
B
CYS
1367
n
132
CYS
1367
B
LEU
1368
n
133
LEU
1368
B
VAL
1369
n
134
VAL
1369
B
LYS
1370
n
135
LYS
1370
B
GLY
1371
n
136
GLY
1371
B
PHE
1372
n
137
PHE
1372
B
TYR
1373
n
138
TYR
1373
B
PRO
1374
n
139
PRO
1374
B
SER
1375
n
140
SER
1375
B
ASP
1376
n
141
ASP
1376
B
ILE
1377
n
142
ILE
1377
B
ALA
1378
n
143
ALA
1378
B
VAL
1379
n
144
VAL
1379
B
GLU
1380
n
145
GLU
1380
B
TRP
1381
n
146
TRP
1381
B
GLU
1382
n
147
GLU
1382
B
SER
1383
n
148
SER
1383
B
ASN
1384
n
149
ASN
1384
B
GLY
1385
n
150
GLY
1385
B
GLN
1386
n
151
GLN
1386
B
PRO
1387
n
152
PRO
1387
B
GLU
1388
n
153
GLU
1388
B
ASN
1389
n
154
ASN
1389
B
ASN
1390
n
155
ASN
1390
B
TYR
1391
n
156
TYR
1391
B
LYS
1392
n
157
LYS
1392
B
THR
1393
n
158
THR
1393
B
THR
1394
n
159
THR
1394
B
PRO
1395
n
160
PRO
1395
B
PRO
1396
n
161
PRO
1396
B
VAL
1397
n
162
VAL
1397
B
LEU
1398
n
163
LEU
1398
B
ASP
1399
n
164
ASP
1399
B
SER
1400
n
165
SER
1400
B
ASP
1401
n
166
ASP
1401
B
GLY
1402
n
167
GLY
1402
B
SER
1403
n
168
SER
1403
B
PHE
1404
n
169
PHE
1404
B
PHE
1405
n
170
PHE
1405
B
LEU
1406
n
171
LEU
1406
B
TYR
1407
n
172
TYR
1407
B
SER
1408
n
173
SER
1408
B
LYS
1409
n
174
LYS
1409
B
LEU
1410
n
175
LEU
1410
B
THR
1411
n
176
THR
1411
B
VAL
1412
n
177
VAL
1412
B
ASP
1413
n
178
ASP
1413
B
LYS
1414
n
179
LYS
1414
B
SER
1415
n
180
SER
1415
B
ARG
1416
n
181
ARG
1416
B
TRP
1417
n
182
TRP
1417
B
GLN
1418
n
183
GLN
1418
B
GLN
1419
n
184
GLN
1419
B
GLY
1420
n
185
GLY
1420
B
ASN
1421
n
186
ASN
1421
B
VAL
1422
n
187
VAL
1422
B
PHE
1423
n
188
PHE
1423
B
SER
1424
n
189
SER
1424
B
CYS
1425
n
190
CYS
1425
B
SER
1426
n
191
SER
1426
B
VAL
1427
n
192
VAL
1427
B
MET
1428
n
193
MET
1428
B
HIS
1429
n
194
HIS
1429
B
GLU
1430
n
195
GLU
1430
B
ALA
1431
n
196
ALA
1431
B
LEU
1432
n
197
LEU
1432
B
HIS
1433
n
198
HIS
1433
B
ASN
1434
n
199
ASN
1434
B
HIS
1435
n
200
HIS
1435
B
TYR
1436
n
201
TYR
1436
B
THR
1437
n
202
THR
1437
B
GLN
1438
n
203
GLN
1438
B
LYS
1439
n
204
LYS
1439
B
SER
1440
n
205
SER
1440
B
LEU
1441
n
206
LEU
1441
B
SER
1442
n
207
SER
1442
B
LEU
1443
n
208
LEU
1443
B
SER
1444
n
209
SER
1444
B
PRO
1445
n
210
PRO
1445
B
n
211
1446
B
n
212
1447
B
author_and_software_defined_assembly
PISA
2
dimeric
2260
-12
21560
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
PHE
241
A
N
PHE
6
A
O
VAL
262
A
O
VAL
27
A
N
VAL
263
A
N
VAL
28
A
O
VAL
302
A
O
VAL
67
A
O
VAL
305
A
O
VAL
70
A
N
LYS
288
A
N
LYS
53
A
O
VAL
282
A
O
VAL
47
A
N
VAL
279
A
N
VAL
44
A
N
ASN
276
A
N
ASN
41
A
O
LYS
322
A
O
LYS
87
A
N
VAL
323
A
N
VAL
88
A
O
ILE
332
A
O
ILE
97
A
N
LEU
351
A
N
LEU
116
A
O
THR
366
A
O
THR
131
A
N
LEU
365
A
N
LEU
130
A
O
LEU
410
A
O
LEU
175
A
O
LYS
409
A
O
LYS
174
A
N
LYS
392
A
N
LYS
157
A
N
LEU
351
A
N
LEU
116
A
O
THR
366
A
O
THR
131
A
N
LEU
365
A
N
LEU
130
A
O
LEU
410
A
O
LEU
175
A
O
PHE
405
A
O
PHE
170
A
N
VAL
397
A
N
VAL
162
A
N
GLU
380
A
N
GLU
145
A
O
SER
426
A
O
SER
191
A
N
PHE
423
A
N
PHE
188
A
O
LEU
441
A
O
LEU
206
B
N
PHE
1243
B
N
PHE
8
B
O
THR
1260
B
O
THR
25
B
N
VAL
1259
B
N
VAL
24
B
O
LEU
1306
B
O
LEU
71
B
O
VAL
1303
B
O
VAL
68
B
N
LYS
1290
B
N
LYS
55
B
O
VAL
1284
B
O
VAL
49
B
N
TRP
1277
B
N
TRP
42
B
N
TYR
1278
B
N
TYR
43
B
O
LYS
1320
B
O
LYS
85
B
N
TYR
1319
B
N
TYR
84
B
O
ILE
1336
B
O
ILE
101
B
N
GLN
1347
B
N
GLN
112
B
O
LYS
1370
B
O
LYS
135
B
N
PHE
1372
B
N
PHE
137
B
O
PHE
1404
B
O
PHE
169
B
O
LYS
1409
B
O
LYS
174
B
N
LYS
1392
B
N
LYS
157
B
N
GLN
1347
B
N
GLN
112
B
O
LYS
1370
B
O
LYS
135
B
N
PHE
1372
B
N
PHE
137
B
O
PHE
1404
B
O
PHE
169
B
O
PHE
1405
B
O
PHE
170
B
N
VAL
1397
B
N
VAL
162
B
N
GLU
1380
B
N
GLU
145
B
O
SER
1426
B
O
SER
191
B
N
PHE
1423
B
N
PHE
188
B
O
LEU
1441
B
O
LEU
206
1
A
PRO
445
A
PRO
210
1
Y
1
A
GLY
446
A
GLY
211
1
Y
1
A
LYS
447
A
LYS
212
1
Y
1
B
GLY
1446
B
GLY
211
1
Y
1
B
LYS
1447
B
LYS
212
1
Y
1
A
ASP
265
77.14
44.75
1
A
SER
267
-28.28
125.48
1
A
ASP
270
-111.62
79.75
1
A
ASN
286
-60.50
17.79
1
A
PRO
291
-28.53
145.47
1
A
GLU
294
-40.45
106.98
1
A
TYR
296
17.38
61.73
1
A
ASP
297
168.23
21.73
1
A
SER
298
62.81
-8.34
1
A
GLN
311
-59.69
-9.89
1
A
LYS
326
-48.41
2.84
1
A
PRO
329
-52.38
-71.79
1
A
ASN
389
-65.49
-74.49
1
A
ASN
390
-59.03
87.71
1
A
ASN
421
-45.54
154.61
1
A
TYR
436
-171.71
117.40
1
A
LEU
443
-63.21
55.05
1
B
ASP
1265
77.55
40.40
1
B
GLU
1269
-54.28
-71.96
1
B
ALA
1287
-56.59
-175.27
1
B
LYS
1288
-172.25
129.13
1
B
PRO
1291
-53.93
106.81
1
B
ARG
1292
-45.52
166.64
1
B
ASP
1297
-168.21
56.32
1
B
SER
1298
71.17
-55.18
1
B
ALA
1327
-92.78
57.22
1
B
PRO
1329
-33.13
-90.11
1
B
SER
1337
-178.84
136.82
1
B
LYS
1338
-43.35
151.78
1
B
GLU
1356
-59.15
-9.72
1
B
ASN
1384
41.57
81.22
1
B
ASN
1390
-151.04
60.68
1
B
LYS
1414
-37.88
-37.35
1
B
GLN
1419
-52.42
1.94
1
B
ASN
1421
51.65
118.52
1
B
LEU
1441
-171.06
118.49
1
B
SER
1444
-78.84
-79.54
0.32
0.24
0.24
2.84
20.08
1273
13939
13869
random
1
THROUGHOUT
2.0
MOLECULAR REPLACEMENT
Engh & Huber
2.84
20.08
86
3433
0
0
3347
2.84
50.
3DNK
13939
13869
2.0
2.0
0.049
1
98.
.163
2.84
2.94
82.0
data collection
CrystalClear
refinement
CNS
data reduction
CrystalClear
data scaling
CrystalClear
phasing
CNS
Enzyme deglycosylated Human IgG1 Fc fragment
1
N
N
1
N
N
2
N
N
2
N
N
A
LYS
246
A
LYS
11
HELX_P
A
MET
252
A
MET
17
1
1
7
A
LEU
309
A
LEU
74
HELX_P
A
LEU
314
A
LEU
79
1
2
6
A
SER
354
A
SER
119
HELX_P
A
LYS
360
A
LYS
125
5
3
7
A
LYS
414
A
LYS
179
HELX_P
A
GLY
420
A
GLY
185
1
4
7
A
LEU
432
A
LEU
197
HELX_P
A
TYR
436
A
TYR
201
5
5
5
B
LYS
1246
B
LYS
11
HELX_P
B
MET
1252
B
MET
17
1
6
7
B
LEU
1309
B
LEU
74
HELX_P
B
ASN
1315
B
ASN
80
1
7
7
B
SER
1354
B
SER
119
HELX_P
B
MET
1358
B
MET
123
5
8
5
B
LYS
1414
B
LYS
179
HELX_P
B
GLN
1419
B
GLN
184
1
9
6
B
LEU
1432
B
LEU
197
HELX_P
B
ASN
1434
B
ASN
199
5
10
3
disulf
2.036
A
CYS
261
A
SG
CYS
26
1_555
A
CYS
321
A
SG
CYS
86
1_555
disulf
2.030
A
CYS
367
A
SG
CYS
132
1_555
A
CYS
425
A
SG
CYS
190
1_555
disulf
2.027
B
CYS
1261
B
SG
CYS
26
1_555
B
CYS
1321
B
SG
CYS
86
1_555
disulf
2.038
B
CYS
1367
B
SG
CYS
132
1_555
B
CYS
1425
B
SG
CYS
190
1_555
IMMUNE SYSTEM
Immunoglobulin fold, IMMUNE SYSTEM
A
TYR
373
A
TYR
138
1
A
PRO
374
A
PRO
139
-0.10
B
TYR
1373
B
TYR
138
1
B
PRO
1374
B
PRO
139
-0.31
Q6PI81_HUMAN
UNP
1
267
Q6PI81
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLN
GKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTP
PVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK
267
478
3DNK
236
447
Q6PI81
A
1
1
212
267
478
3DNK
1236
1447
Q6PI81
B
1
1
212
1
ASN
engineered mutation
ASP
297
3DNK
A
Q6PI81
UNP
328
62
2
ASN
engineered mutation
ASP
1297
3DNK
B
Q6PI81
UNP
328
62
4
4
4
4
3
4
4
4
4
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
SER
239
A
SER
4
A
PHE
243
A
PHE
8
A
GLU
258
A
GLU
23
A
VAL
266
A
VAL
31
A
TYR
300
A
TYR
65
A
THR
307
A
THR
72
A
LYS
288
A
LYS
53
A
LYS
290
A
LYS
55
A
VAL
282
A
VAL
47
A
VAL
284
A
VAL
49
A
LYS
274
A
LYS
39
A
VAL
279
A
VAL
44
A
TYR
319
A
TYR
84
A
SER
324
A
SER
89
A
ILE
332
A
ILE
97
A
ILE
336
A
ILE
101
A
GLN
347
A
GLN
112
A
LEU
351
A
LEU
116
A
GLN
362
A
GLN
127
A
PHE
372
A
PHE
137
A
PHE
404
A
PHE
169
A
ASP
413
A
ASP
178
A
TYR
391
A
TYR
156
A
THR
393
A
THR
158
A
GLN
347
A
GLN
112
A
LEU
351
A
LEU
116
A
GLN
362
A
GLN
127
A
PHE
372
A
PHE
137
A
PHE
404
A
PHE
169
A
ASP
413
A
ASP
178
A
VAL
397
A
VAL
162
A
LEU
398
A
LEU
163
A
ALA
378
A
ALA
143
A
SER
383
A
SER
148
A
VAL
422
A
VAL
187
A
MET
428
A
MET
193
A
THR
437
A
THR
202
A
SER
442
A
SER
207
B
SER
1239
B
SER
4
B
PHE
1243
B
PHE
8
B
GLU
1258
B
GLU
23
B
VAL
1266
B
VAL
31
B
TYR
1300
B
TYR
65
B
THR
1307
B
THR
72
B
THR
1289
B
THR
54
B
GLU
1294
B
GLU
59
B
VAL
1282
B
VAL
47
B
VAL
1284
B
VAL
49
B
VAL
1273
B
VAL
38
B
VAL
1279
B
VAL
44
B
TYR
1319
B
TYR
84
B
ASN
1325
B
ASN
90
B
ILE
1332
B
ILE
97
B
ILE
1336
B
ILE
101
B
GLN
1347
B
GLN
112
B
LEU
1351
B
LEU
116
B
GLN
1362
B
GLN
127
B
PHE
1372
B
PHE
137
B
PHE
1404
B
PHE
169
B
ASP
1413
B
ASP
178
B
TYR
1391
B
TYR
156
B
THR
1393
B
THR
158
B
GLN
1347
B
GLN
112
B
LEU
1351
B
LEU
116
B
GLN
1362
B
GLN
127
B
PHE
1372
B
PHE
137
B
PHE
1404
B
PHE
169
B
ASP
1413
B
ASP
178
B
VAL
1397
B
VAL
162
B
LEU
1398
B
LEU
163
B
ALA
1378
B
ALA
143
B
GLU
1382
B
GLU
147
B
PHE
1423
B
PHE
188
B
MET
1428
B
MET
193
B
TYR
1436
B
TYR
201
B
LEU
1441
B
LEU
206
19
P 21 21 21