0.012292 0.007097 0.000000 0.000000 0.014193 0.000000 0.000000 0.000000 0.013704 0.00000 0.00000 0.00000 Epstein, T.M. Samanta, U. Bahnson, B.J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 81.356 81.356 72.969 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C7 H17 O2 P 164.182 (1R)-1,2,2-TRIMETHYLPROPYL (R)-METHYLPHOSPHINATE non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N C N 89 N C N 90 N C N 91 N C N 92 R C N 93 N C N 94 N C N 95 N O N 96 R P N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N N N 116 S C N 117 N C N 118 N O N 119 N C N 120 N C N 121 N C N 122 N O N 123 N N N 124 N O N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N N N 136 S C N 137 N C N 138 N O N 139 N C N 140 N C N 141 N C N 142 N O N 143 N O N 144 N O N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N N N 155 N C N 156 N C N 157 N O N 158 N O N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N N N 165 S C N 166 N C N 167 N O N 168 N C Y 169 N C Y 170 N N Y 171 N C Y 172 N C Y 173 N N N 174 N O N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N O N 186 N H N 187 N H N 188 N N N 189 S C N 190 N C N 191 N O N 192 S C N 193 N C N 194 N C N 195 N C N 196 N O N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N N N 211 S C N 212 N C N 213 N O N 214 N C N 215 N C N 216 N C N 217 N C N 218 N O N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N N N 233 S C N 234 N C N 235 N O N 236 N C N 237 N C N 238 N C N 239 N C N 240 N N N 241 N O N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N N N 258 S C N 259 N C N 260 N O N 261 N C N 262 N C N 263 N S N 264 N C N 265 N O N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N N N 278 S C N 279 N C N 280 N O N 281 N C Y 282 N C Y 283 N C Y 284 N C Y 285 N C Y 286 N C Y 287 N C N 288 N O N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N N N 301 S C N 302 N C N 303 N O N 304 N C N 305 N C N 306 N C N 307 N O N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N N N 318 S C N 319 N C N 320 N O N 321 N C N 322 N O N 323 N O N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N N N 332 S C N 333 N C N 334 N O N 335 R C N 336 N O N 337 N C N 338 N O N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C Y 353 N C Y 354 N C Y 355 N C Y 356 N N Y 357 N C Y 358 N C Y 359 N C Y 360 N C Y 361 N C N 362 N O N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N N N 376 S C N 377 N C N 378 N O N 379 N C Y 380 N C Y 381 N C Y 382 N C Y 383 N C Y 384 N C Y 385 N C N 386 N O N 387 N O N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N N N 400 S C N 401 N C N 402 N O N 403 N C N 404 N C N 405 N C N 406 N O N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N doub N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N doub N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N doub N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N doub N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N doub N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N doub N 162 N sing N 163 N sing N 164 N sing N 165 N sing Y 166 N sing Y 167 N doub Y 168 N doub N 169 N sing Y 170 N sing N 171 N sing Y 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N doub N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N doub N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N doub N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N doub N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N doub N 270 N sing N 271 N sing N 272 N sing N 273 N sing Y 274 N doub Y 275 N sing Y 276 N sing N 277 N sing Y 278 N doub N 279 N sing Y 280 N doub N 281 N sing Y 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N doub N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N doub N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N doub N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N doub N 339 N sing N 340 N sing N 341 N sing N 342 N sing Y 343 N doub Y 344 N sing Y 345 N sing N 346 N sing Y 347 N doub Y 348 N sing Y 349 N sing N 350 N sing Y 351 N sing Y 352 N doub N 353 N sing Y 354 N doub N 355 N sing Y 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N doub N 367 N sing N 368 N sing N 369 N sing N 370 N sing Y 371 N doub Y 372 N sing Y 373 N sing N 374 N sing Y 375 N doub N 376 N sing Y 377 N doub N 378 N sing Y 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N doub N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing US Biochemistry BICHAW 0033 0006-2960 48 3425 3435 10.1021/bi8023527 19271773 Crystal structures of brain group-VIII phospholipase A2 in nonaged complexes with the organophosphorus nerve agents soman and sarin. 2009 UK Nature NATUAS 0006 0028-0836 385 89 93 Brain Acetylhydrolase that Inactivates Platelet-Activating Factor is a G-Protein-Like Trimer 1997 10.2210/pdb3dt9/pdb pdb_00003dt9 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 OSMIC BLUE IMAGE PLATE 2003-09-05 RIGAKU SINGLE WAVELENGTH M x-ray 1 1.54 1.0 1.54 ROTATING ANODE RIGAKU RU300 25887.297 Brain Platelet-activating factor acetylhydrolase IB subunit alpha 3.1.1.47 C55S 1 man polymer 164.182 (1R)-1,2,2-TRIMETHYLPROPYL (R)-METHYLPHOSPHINATE 1 syn non-polymer 18.015 water 80 nat water PAF acetylhydrolase 29 kDa subunit, PAF-AH 29 kDa subunit, PAF-AH subunit alpha, PAFAH subunit alpha no no MSGDENPASKPTPVQDVQGDGRWMSLHHRFVADSKDKEPEVVFIGDSLVQLMHQSEIWRELFSPLHALNFGIGGDSTQHV LWRLENGELEHIRPKIVVVWVGTNNHGHTAEQVTGGIKAIVQLVNERQPQARVVVLGLLPRGQHPNPLREKNRRVNELVR AALAGHPRAHFLDADPGFVHSDGTISHHDMYDYLHLSRLGYTPVCRALHSLLLRLLTQDQGQGGAPLPEPSP MSGDENPASKPTPVQDVQGDGRWMSLHHRFVADSKDKEPEVVFIGDSLVQLMHQSEIWRELFSPLHALNFGIGGDSTQHV LWRLENGELEHIRPKIVVVWVGTNNHGHTAEQVTGGIKAIVQLVNERQPQARVVVLGLLPRGQHPNPLREKNRRVNELVR AALAGHPRAHFLDADPGFVHSDGTISHHDMYDYLHLSRLGYTPVCRALHSLLLRLLTQDQGQGGAPLPEPSP A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n bovine,cow,domestic cattle,domestic cow sample PAFAH1B3, PAFAHG 9913 BRAIN Bos taurus 562 Escherichia coli 1 2.69 54.32 VAPOR DIFFUSION, HANGING DROP 6.5 Ammonium sulfate, Sodium acetate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K 298 software software struct_conn database_2 struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond pdbx_initial_refinement_model repository Initial release Version format compliance Refinement description Data collection Derived calculations Refinement description Database references Derived calculations Data collection Refinement description 1 0 2009-05-12 1 1 2011-07-13 1 2 2017-10-25 1 3 2019-07-24 1 4 2021-10-20 1 5 2023-08-30 _software.name _software.name _software.version _struct_conn.pdbx_leaving_atom_flag _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id same wild type protein same protein complexed with Paraoxon same protein complexed with Sarin RCSB Y RCSB 2008-07-14 REL REL GD7 (1R)-1,2,2-TRIMETHYLPROPYL (R)-METHYLPHOSPHINATE HOH water 1WAB PDB ENTRY 1WAB PDB experimental model GD7 347 2 GD7 GD7 347 A HOH 1001 3 HOH HOH 1001 A HOH 1002 3 HOH HOH 1002 A HOH 1003 3 HOH HOH 1003 A HOH 1004 3 HOH HOH 1004 A HOH 1005 3 HOH HOH 1005 A HOH 1006 3 HOH HOH 1006 A HOH 1007 3 HOH HOH 1007 A HOH 1008 3 HOH HOH 1008 A HOH 1009 3 HOH HOH 1009 A HOH 1010 3 HOH HOH 1010 A HOH 1011 3 HOH HOH 1011 A HOH 1012 3 HOH HOH 1012 A HOH 1013 3 HOH HOH 1013 A HOH 1014 3 HOH HOH 1014 A HOH 1015 3 HOH HOH 1015 A HOH 1016 3 HOH HOH 1016 A HOH 1017 3 HOH HOH 1017 A HOH 1018 3 HOH HOH 1018 A HOH 1019 3 HOH HOH 1019 A HOH 1020 3 HOH HOH 1020 A HOH 1021 3 HOH HOH 1021 A HOH 1022 3 HOH HOH 1022 A HOH 1023 3 HOH HOH 1023 A HOH 1024 3 HOH HOH 1024 A HOH 1025 3 HOH HOH 1025 A HOH 1026 3 HOH HOH 1026 A HOH 1027 3 HOH HOH 1027 A HOH 1028 3 HOH HOH 1028 A HOH 1029 3 HOH HOH 1029 A HOH 1030 3 HOH HOH 1030 A HOH 1031 3 HOH HOH 1031 A HOH 1032 3 HOH HOH 1032 A HOH 1033 3 HOH HOH 1033 A HOH 1034 3 HOH HOH 1034 A HOH 1035 3 HOH HOH 1035 A HOH 1036 3 HOH HOH 1036 A HOH 1037 3 HOH HOH 1037 A HOH 1038 3 HOH HOH 1038 A HOH 1039 3 HOH HOH 1039 A HOH 1040 3 HOH HOH 1040 A HOH 1041 3 HOH HOH 1041 A HOH 1042 3 HOH HOH 1042 A HOH 1043 3 HOH HOH 1043 A HOH 1044 3 HOH HOH 1044 A HOH 1045 3 HOH HOH 1045 A HOH 1046 3 HOH HOH 1046 A HOH 1047 3 HOH HOH 1047 A HOH 1048 3 HOH HOH 1048 A HOH 1049 3 HOH HOH 1049 A HOH 1050 3 HOH HOH 1050 A HOH 1051 3 HOH HOH 1051 A HOH 1052 3 HOH HOH 1052 A HOH 1053 3 HOH HOH 1053 A HOH 1054 3 HOH HOH 1054 A HOH 1055 3 HOH HOH 1055 A HOH 1056 3 HOH HOH 1056 A HOH 1057 3 HOH HOH 1057 A HOH 1058 3 HOH HOH 1058 A HOH 1059 3 HOH HOH 1059 A HOH 1060 3 HOH HOH 1060 A HOH 1061 3 HOH HOH 1061 A HOH 1062 3 HOH HOH 1062 A HOH 1063 3 HOH HOH 1063 A HOH 1064 3 HOH HOH 1064 A HOH 1065 3 HOH HOH 1065 A HOH 1066 3 HOH HOH 1066 A HOH 1067 3 HOH HOH 1067 A HOH 1068 3 HOH HOH 1068 A HOH 1069 3 HOH HOH 1069 A HOH 1070 3 HOH HOH 1070 A HOH 1072 3 HOH HOH 1072 A HOH 1073 3 HOH HOH 1073 A HOH 1074 3 HOH HOH 1074 A HOH 1075 3 HOH HOH 1075 A HOH 1076 3 HOH HOH 1076 A HOH 1077 3 HOH HOH 1077 A HOH 1078 3 HOH HOH 1078 A HOH 1079 3 HOH HOH 1079 A HOH 1080 3 HOH HOH 1080 A HOH 1081 3 HOH HOH 1081 A n 1 1 A n 2 2 A n 3 3 A n 4 4 A GLU 5 n 5 GLU 5 A ASN 6 n 6 ASN 6 A PRO 7 n 7 PRO 7 A ALA 8 n 8 ALA 8 A SER 9 n 9 SER 9 A LYS 10 n 10 LYS 10 A PRO 11 n 11 PRO 11 A THR 12 n 12 THR 12 A PRO 13 n 13 PRO 13 A VAL 14 n 14 VAL 14 A GLN 15 n 15 GLN 15 A ASP 16 n 16 ASP 16 A VAL 17 n 17 VAL 17 A GLN 18 n 18 GLN 18 A GLY 19 n 19 GLY 19 A ASP 20 n 20 ASP 20 A GLY 21 n 21 GLY 21 A ARG 22 n 22 ARG 22 A TRP 23 n 23 TRP 23 A MET 24 n 24 MET 24 A SER 25 n 25 SER 25 A LEU 26 n 26 LEU 26 A HIS 27 n 27 HIS 27 A HIS 28 n 28 HIS 28 A ARG 29 n 29 ARG 29 A PHE 30 n 30 PHE 30 A VAL 31 n 31 VAL 31 A ALA 32 n 32 ALA 32 A ASP 33 n 33 ASP 33 A SER 34 n 34 SER 34 A LYS 35 n 35 LYS 35 A ASP 36 n 36 ASP 36 A LYS 37 n 37 LYS 37 A GLU 38 n 38 GLU 38 A PRO 39 n 39 PRO 39 A GLU 40 n 40 GLU 40 A VAL 41 n 41 VAL 41 A VAL 42 n 42 VAL 42 A PHE 43 n 43 PHE 43 A ILE 44 n 44 ILE 44 A GLY 45 n 45 GLY 45 A ASP 46 n 46 ASP 46 A SER 47 n 47 SER 47 A LEU 48 n 48 LEU 48 A VAL 49 n 49 VAL 49 A GLN 50 n 50 GLN 50 A LEU 51 n 51 LEU 51 A MET 52 n 52 MET 52 A HIS 53 n 53 HIS 53 A GLN 54 n 54 GLN 54 A SER 55 n 55 SER 55 A GLU 56 n 56 GLU 56 A ILE 57 n 57 ILE 57 A TRP 58 n 58 TRP 58 A ARG 59 n 59 ARG 59 A GLU 60 n 60 GLU 60 A LEU 61 n 61 LEU 61 A PHE 62 n 62 PHE 62 A SER 63 n 63 SER 63 A PRO 64 n 64 PRO 64 A LEU 65 n 65 LEU 65 A HIS 66 n 66 HIS 66 A ALA 67 n 67 ALA 67 A LEU 68 n 68 LEU 68 A ASN 69 n 69 ASN 69 A PHE 70 n 70 PHE 70 A GLY 71 n 71 GLY 71 A ILE 72 n 72 ILE 72 A GLY 73 n 73 GLY 73 A GLY 74 n 74 GLY 74 A ASP 75 n 75 ASP 75 A SER 76 n 76 SER 76 A THR 77 n 77 THR 77 A GLN 78 n 78 GLN 78 A HIS 79 n 79 HIS 79 A VAL 80 n 80 VAL 80 A LEU 81 n 81 LEU 81 A TRP 82 n 82 TRP 82 A ARG 83 n 83 ARG 83 A LEU 84 n 84 LEU 84 A GLU 85 n 85 GLU 85 A ASN 86 n 86 ASN 86 A GLY 87 n 87 GLY 87 A GLU 88 n 88 GLU 88 A LEU 89 n 89 LEU 89 A GLU 90 n 90 GLU 90 A HIS 91 n 91 HIS 91 A ILE 92 n 92 ILE 92 A ARG 93 n 93 ARG 93 A PRO 94 n 94 PRO 94 A LYS 95 n 95 LYS 95 A ILE 96 n 96 ILE 96 A VAL 97 n 97 VAL 97 A VAL 98 n 98 VAL 98 A VAL 99 n 99 VAL 99 A TRP 100 n 100 TRP 100 A VAL 101 n 101 VAL 101 A GLY 102 n 102 GLY 102 A THR 103 n 103 THR 103 A ASN 104 n 104 ASN 104 A ASN 105 n 105 ASN 105 A HIS 106 n 106 HIS 106 A GLY 107 n 107 GLY 107 A HIS 108 n 108 HIS 108 A THR 109 n 109 THR 109 A ALA 110 n 110 ALA 110 A GLU 111 n 111 GLU 111 A GLN 112 n 112 GLN 112 A VAL 113 n 113 VAL 113 A THR 114 n 114 THR 114 A GLY 115 n 115 GLY 115 A GLY 116 n 116 GLY 116 A ILE 117 n 117 ILE 117 A LYS 118 n 118 LYS 118 A ALA 119 n 119 ALA 119 A ILE 120 n 120 ILE 120 A VAL 121 n 121 VAL 121 A GLN 122 n 122 GLN 122 A LEU 123 n 123 LEU 123 A VAL 124 n 124 VAL 124 A ASN 125 n 125 ASN 125 A GLU 126 n 126 GLU 126 A ARG 127 n 127 ARG 127 A GLN 128 n 128 GLN 128 A PRO 129 n 129 PRO 129 A GLN 130 n 130 GLN 130 A ALA 131 n 131 ALA 131 A ARG 132 n 132 ARG 132 A VAL 133 n 133 VAL 133 A VAL 134 n 134 VAL 134 A VAL 135 n 135 VAL 135 A LEU 136 n 136 LEU 136 A GLY 137 n 137 GLY 137 A LEU 138 n 138 LEU 138 A LEU 139 n 139 LEU 139 A PRO 140 n 140 PRO 140 A ARG 141 n 141 ARG 141 A GLY 142 n 142 GLY 142 A GLN 143 n 143 GLN 143 A HIS 144 n 144 HIS 144 A PRO 145 n 145 PRO 145 A ASN 146 n 146 ASN 146 A PRO 147 n 147 PRO 147 A LEU 148 n 148 LEU 148 A ARG 149 n 149 ARG 149 A GLU 150 n 150 GLU 150 A LYS 151 n 151 LYS 151 A ASN 152 n 152 ASN 152 A ARG 153 n 153 ARG 153 A ARG 154 n 154 ARG 154 A VAL 155 n 155 VAL 155 A ASN 156 n 156 ASN 156 A GLU 157 n 157 GLU 157 A LEU 158 n 158 LEU 158 A VAL 159 n 159 VAL 159 A ARG 160 n 160 ARG 160 A ALA 161 n 161 ALA 161 A ALA 162 n 162 ALA 162 A LEU 163 n 163 LEU 163 A ALA 164 n 164 ALA 164 A GLY 165 n 165 GLY 165 A HIS 166 n 166 HIS 166 A PRO 167 n 167 PRO 167 A ARG 168 n 168 ARG 168 A ALA 169 n 169 ALA 169 A HIS 170 n 170 HIS 170 A PHE 171 n 171 PHE 171 A LEU 172 n 172 LEU 172 A ASP 173 n 173 ASP 173 A ALA 174 n 174 ALA 174 A ASP 175 n 175 ASP 175 A PRO 176 n 176 PRO 176 A GLY 177 n 177 GLY 177 A PHE 178 n 178 PHE 178 A VAL 179 n 179 VAL 179 A HIS 180 n 180 HIS 180 A SER 181 n 181 SER 181 A ASP 182 n 182 ASP 182 A GLY 183 n 183 GLY 183 A THR 184 n 184 THR 184 A ILE 185 n 185 ILE 185 A SER 186 n 186 SER 186 A HIS 187 n 187 HIS 187 A HIS 188 n 188 HIS 188 A ASP 189 n 189 ASP 189 A MET 190 n 190 MET 190 A TYR 191 n 191 TYR 191 A ASP 192 n 192 ASP 192 A TYR 193 n 193 TYR 193 A LEU 194 n 194 LEU 194 A HIS 195 n 195 HIS 195 A LEU 196 n 196 LEU 196 A SER 197 n 197 SER 197 A ARG 198 n 198 ARG 198 A LEU 199 n 199 LEU 199 A GLY 200 n 200 GLY 200 A TYR 201 n 201 TYR 201 A THR 202 n 202 THR 202 A PRO 203 n 203 PRO 203 A VAL 204 n 204 VAL 204 A CYS 205 n 205 CYS 205 A ARG 206 n 206 ARG 206 A ALA 207 n 207 ALA 207 A LEU 208 n 208 LEU 208 A HIS 209 n 209 HIS 209 A SER 210 n 210 SER 210 A LEU 211 n 211 LEU 211 A LEU 212 n 212 LEU 212 A LEU 213 n 213 LEU 213 A ARG 214 n 214 ARG 214 A LEU 215 n 215 LEU 215 A LEU 216 n 216 LEU 216 A n 217 217 A n 218 218 A n 219 219 A n 220 220 A n 221 221 A n 222 222 A n 223 223 A n 224 224 A n 225 225 A n 226 226 A n 227 227 A n 228 228 A n 229 229 A n 230 230 A n 231 231 A n 232 232 A author_and_software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O PHE 70 A O PHE 70 A N PHE 43 A N PHE 43 A N VAL 42 A N VAL 42 A O VAL 98 A O VAL 98 A N VAL 99 A N VAL 99 A O VAL 134 A O VAL 134 A N VAL 133 A N VAL 133 A O HIS 170 A O HIS 170 1 A CG GLU 56 A CG GLU 56 1 Y 1 A CD GLU 56 A CD GLU 56 1 Y 1 A OE1 GLU 56 A OE1 GLU 56 1 Y 1 A OE2 GLU 56 A OE2 GLU 56 1 Y 1 A CG ARG 59 A CG ARG 59 1 Y 1 A CD ARG 59 A CD ARG 59 1 Y 1 A NE ARG 59 A NE ARG 59 1 Y 1 A CZ ARG 59 A CZ ARG 59 1 Y 1 A NH1 ARG 59 A NH1 ARG 59 1 Y 1 A NH2 ARG 59 A NH2 ARG 59 1 Y 1 A CG GLU 150 A CG GLU 150 1 Y 1 A CD GLU 150 A CD GLU 150 1 Y 1 A OE1 GLU 150 A OE1 GLU 150 1 Y 1 A OE2 GLU 150 A OE2 GLU 150 1 Y 1 A CG GLU 157 A CG GLU 157 1 Y 1 A CD GLU 157 A CD GLU 157 1 Y 1 A OE1 GLU 157 A OE1 GLU 157 1 Y 1 A OE2 GLU 157 A OE2 GLU 157 1 Y 1 A CG ARG 198 A CG ARG 198 1 Y 1 A CD ARG 198 A CD ARG 198 1 Y 1 A NE ARG 198 A NE ARG 198 1 Y 1 A CZ ARG 198 A CZ ARG 198 1 Y 1 A NH1 ARG 198 A NH1 ARG 198 1 Y 1 A NH2 ARG 198 A NH2 ARG 198 1 Y 1 A MET 1 A MET 1 1 Y 1 A SER 2 A SER 2 1 Y 1 A GLY 3 A GLY 3 1 Y 1 A ASP 4 A ASP 4 1 Y 1 A THR 217 A THR 217 1 Y 1 A GLN 218 A GLN 218 1 Y 1 A ASP 219 A ASP 219 1 Y 1 A GLN 220 A GLN 220 1 Y 1 A GLY 221 A GLY 221 1 Y 1 A GLN 222 A GLN 222 1 Y 1 A GLY 223 A GLY 223 1 Y 1 A GLY 224 A GLY 224 1 Y 1 A ALA 225 A ALA 225 1 Y 1 A PRO 226 A PRO 226 1 Y 1 A LEU 227 A LEU 227 1 Y 1 A PRO 228 A PRO 228 1 Y 1 A GLU 229 A GLU 229 1 Y 1 A PRO 230 A PRO 230 1 Y 1 A SER 231 A SER 231 1 Y 1 A PRO 232 A PRO 232 1 Y 1 A C5 GD7 347 WRONG HAND 1 A ASP 46 -97.58 -155.52 1 A HIS 66 66.24 72.17 1 A ARG 168 -150.31 20.49 1 A LEU 194 -145.46 -62.25 21.544 -0.23 -0.11 0.00 -0.23 0.00 0.34 0.936 0.924 0.22831 0.21031 0.21120 1.85 30 1157 21324 21324 5.1 92.82 2.347 0.074 RANDOM 1 THROUGHOUT 1.0 MOLECULAR REPLACEMENT 0.142 0.126 0.80 0.80 1.40 PDB ENTRY 1WAB MAXIMUM LIKELIHOOD MASK 1.85 30 80 1755 10 0 1665 0.013 0.021 1719 1.268 1.947 2342 4.103 5.000 209 35.379 23.049 82 14.351 15.000 269 19.434 15.000 14 0.095 0.200 259 0.005 0.020 1320 0.246 0.200 825 0.313 0.200 1161 0.132 0.200 86 0.191 0.200 23 0.084 0.200 5 1.321 1.500 1084 1.649 2.000 1696 2.517 3.000 710 3.783 4.500 646 0.313 0.266 1.898 66 1300 20 77.53 1.85 70.53 3DT9 23397 23397 1.00 1.000 0.07900 1 23.4400 6.50 96.6 0.45100 1.85 1.92 2.510 3.80 88.9 refinement REFMAC OF CCP4I FOR FINAL REFINEMENT refinement CNS data collection CrystalClear data reduction DENZO data scaling SCALEPACK phasing CNS phasing REFMAC OF CCP4I FOR FINAL REFINEMENT Crystal Structure of Bovin Brain Platelet Activating Factor Acetylhydrolase Covalently Inhibited by Soman 1 N N 2 N N 3 N N A ASN 6 A ASN 6 HELX_P A LYS 10 A LYS 10 5 1 5 A GLY 21 A GLY 21 HELX_P A LYS 37 A LYS 37 1 2 17 A ASP 46 A ASP 46 HELX_P A GLN 54 A GLN 54 1 3 9 A SER 55 A SER 55 HELX_P A PHE 62 A PHE 62 1 4 8 A SER 63 A SER 63 HELX_P A LEU 65 A LEU 65 5 5 3 A SER 76 A SER 76 HELX_P A ASN 86 A ASN 86 1 6 11 A THR 109 A THR 109 HELX_P A GLN 128 A GLN 128 1 7 20 A ASN 146 A ASN 146 HELX_P A ALA 164 A ALA 164 1 8 19 A SER 197 A SER 197 HELX_P A LEU 216 A LEU 216 1 9 20 covale 1.577 none A SER 47 A OG SER 47 1_555 A GD7 347 B P1 GD7 1_555 HYDROLASE PLATELET ACTIVATING FACTOR ACETYLHYDROLASE, PAF-AH IB, ALPHA-1 SUBUNIT, LIS1, GROUP VIII PHOSPHOLIPASE A2, 26 kDa, SOMAN, Cytoplasm, Hydrolase, Lipid degradation, PLATELET FACTOR PA1B3_BOVIN UNP 1 1 Q29460 MSGDENPASKPTPVQDVQGDGRWMSLHHRFVADSKDKEPEVVFIGDSLVQLMHQCEIWRELFSPLHALNFGIGGDSTQHV LWRLENGELEHIRPKIVVVWVGTNNHGHTAEQVTGGIKAIVQLVNERQPQARVVVLGLLPRGQHPNPLREKNRRVNELVR AALAGHPRAHFLDADPGFVHSDGTISHHDMYDYLHLSRLGYTPVCRALHSLLLRLLTQDQGQGGAPLPEPSP 1 232 3DT9 1 232 Q29460 A 1 1 232 1 CYS engineered mutation SER 55 3DT9 A Q29460 UNP 55 55 5 parallel parallel parallel parallel A ALA 67 A ALA 67 A GLY 71 A GLY 71 A VAL 41 A VAL 41 A GLY 45 A GLY 45 A ILE 96 A ILE 96 A TRP 100 A TRP 100 A ARG 132 A ARG 132 A LEU 136 A LEU 136 A ALA 169 A ALA 169 A LEU 172 A LEU 172 BINDING SITE FOR RESIDUE GD7 A 347 A GD7 347 Software 7 A ASP 46 A ASP 46 7 1_555 A SER 47 A SER 47 7 1_555 A GLY 73 A GLY 73 7 1_555 A GLY 74 A GLY 74 7 1_555 A THR 103 A THR 103 7 1_555 A ASN 104 A ASN 104 7 1_555 A HIS 195 A HIS 195 7 1_555 152 P 31 2 1