0.009363 0.000000 0.003092 0.000000 0.011349 0.000000 0.000000 0.000000 0.011672 0.00000 0.00000 0.00000 Hymowitz, S.G. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 108.28 90.00 106.806 88.117 90.226 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Cell(Cambridge,Mass.) CELLB5 0998 0092-8674 134 668 678 10.1016/j.cell.2008.07.039 18724939 Ubiquitin chain editing revealed by polyubiquitin linkage-specific antibodies. 2008 10.2210/pdb3dvg/pdb pdb_00003dvg 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 180 1 CCD 2008-01-16 ADSC QUANTUM 315 Si(111) SINGLE WAVELENGTH M x-ray 1 0.97607 1.0 BL7-1 SSRL 0.97607 SYNCHROTRON SSRL BEAMLINE BL7-1 23731.301 Human IgG1 fab fragment light chain 1 man polymer 24590.514 Human IgG1 fab fragment heavy chain 1 man polymer 8974.193 Ubiquitin D77 D77 1 man polymer 8887.120 Ubiquitin K63R 1 man polymer 18.015 water 25 nat water no no SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSARSLYSGVPSRFSGSRSGTDFTLTISSLQ PEDFATYYCQQYSSYSSLFTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSG NSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSARSLYSGVPSRFSGSRSGTDFTLTISSLQ PEDFATYYCQQYSSYSSLFTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSG NSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC A polypeptide(L) no no EISEVQLVESGGGLVQPGGSLRLSCAASGFNVKTGLIHWVRQAPGKGLEWVAYITPYYGSTSYADSVKGRFTISADTSKN TAYLQMNSLRAEDTAVYYCAREYYRWYTAIDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH EISEVQLVESGGGLVQPGGSLRLSCAASGFNVKTGLIHWVRQAPGKGLEWVAYITPYYGSTSYADSVKGRFTISADTSKN TAYLQMNSLRAEDTAVYYCAREYYRWYTAIDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH B polypeptide(L) no no GSHMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGD GSHMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGD X polypeptide(L) no no GSHMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQRESTLHLVLRLRGG GSHMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQRESTLHLVLRLRGG Y polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Human sample Protein selected by phage display fab fragment light chain 9606 Homo sapiens 562 Escherichia coli plasmid pET15b Human sample Protein selected by phage display fab fragment light chain 9606 Homo sapiens 562 Escherichia coli plasmid pET15b Human sample RPS27A, UBA80, UBCEP1, UBA52, UBCEP2, UBB, UBC 9606 Homo sapiens 562 Escherichia coli plasmid pET15b Human sample RPS27A, UBA80, UBCEP1, UBA52, UBCEP2, UBB, UBC 9606 Homo sapiens 562 Escherichia coli plasmid pET15b 1 3.03 59.46 VAPOR DIFFUSION, SITTING DROP 7.3 protein: 17.0 mg/mL in 20 mM Tris-HCl pH 7.3, 150 mM NaCl well solution: 0.1M Tris-HCl pH 8.0, 1.6M LiS04 , VAPOR DIFFUSION, SITTING DROP, temperature 291K 291 database_2 struct_conn struct_ref_seq_dif repository Initial release Advisory Refinement description Version format compliance Database references Derived calculations 1 0 2008-09-30 1 1 2011-07-13 1 2 2021-10-20 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag _struct_ref_seq_dif.details RCSB Y RCSB 2008-07-18 REL REL HOH water HOH 1 5 HOH HOH 217 A HOH 2 5 HOH HOH 218 A HOH 3 5 HOH HOH 219 A HOH 4 5 HOH HOH 220 A HOH 5 5 HOH HOH 221 A HOH 6 5 HOH HOH 222 A HOH 7 5 HOH HOH 223 A HOH 8 5 HOH HOH 224 A HOH 9 5 HOH HOH 225 A HOH 10 5 HOH HOH 226 A HOH 11 5 HOH HOH 227 A HOH 12 5 HOH HOH 228 A HOH 13 5 HOH HOH 229 A HOH 14 5 HOH HOH 230 A HOH 17 5 HOH HOH 231 A HOH 18 5 HOH HOH 232 A HOH 19 5 HOH HOH 233 A HOH 26 5 HOH HOH 234 A HOH 20 5 HOH HOH 228 B HOH 21 5 HOH HOH 229 B HOH 22 5 HOH HOH 230 B HOH 23 5 HOH HOH 231 B HOH 24 5 HOH HOH 232 B HOH 25 5 HOH HOH 233 B HOH 28 5 HOH HOH 234 B n 1 0 A n 2 1 A n 3 2 A n 4 3 A n 5 4 A THR 5 n 6 THR 5 A GLN 6 n 7 GLN 6 A SER 7 n 8 SER 7 A PRO 8 n 9 PRO 8 A SER 9 n 10 SER 9 A SER 10 n 11 SER 10 A LEU 11 n 12 LEU 11 A SER 12 n 13 SER 12 A ALA 13 n 14 ALA 13 A SER 14 n 15 SER 14 A VAL 15 n 16 VAL 15 A GLY 16 n 17 GLY 16 A ASP 17 n 18 ASP 17 A ARG 18 n 19 ARG 18 A VAL 19 n 20 VAL 19 A THR 20 n 21 THR 20 A ILE 21 n 22 ILE 21 A THR 22 n 23 THR 22 A CYS 23 n 24 CYS 23 A ARG 24 n 25 ARG 24 A ALA 25 n 26 ALA 25 A SER 26 n 27 SER 26 A GLN 27 n 28 GLN 27 A SER 28 n 29 SER 28 A VAL 29 n 30 VAL 29 A SER 30 n 31 SER 30 A SER 31 n 32 SER 31 A ALA 32 n 33 ALA 32 A VAL 33 n 34 VAL 33 A ALA 34 n 35 ALA 34 A TRP 35 n 36 TRP 35 A TYR 36 n 37 TYR 36 A GLN 37 n 38 GLN 37 A GLN 38 n 39 GLN 38 A LYS 39 n 40 LYS 39 A PRO 40 n 41 PRO 40 A GLY 41 n 42 GLY 41 A LYS 42 n 43 LYS 42 A ALA 43 n 44 ALA 43 A PRO 44 n 45 PRO 44 A LYS 45 n 46 LYS 45 A LEU 46 n 47 LEU 46 A LEU 47 n 48 LEU 47 A ILE 48 n 49 ILE 48 A TYR 49 n 50 TYR 49 A SER 50 n 51 SER 50 A ALA 51 n 52 ALA 51 A ARG 52 n 53 ARG 52 A SER 53 n 54 SER 53 A LEU 54 n 55 LEU 54 A TYR 55 n 56 TYR 55 A SER 56 n 57 SER 56 A GLY 57 n 58 GLY 57 A VAL 58 n 59 VAL 58 A PRO 59 n 60 PRO 59 A SER 60 n 61 SER 60 A ARG 61 n 62 ARG 61 A PHE 62 n 63 PHE 62 A SER 63 n 64 SER 63 A GLY 64 n 65 GLY 64 A SER 65 n 66 SER 65 A ARG 66 n 67 ARG 66 A SER 67 n 68 SER 67 A GLY 68 n 69 GLY 68 A THR 69 n 70 THR 69 A ASP 70 n 71 ASP 70 A PHE 71 n 72 PHE 71 A THR 72 n 73 THR 72 A LEU 73 n 74 LEU 73 A THR 74 n 75 THR 74 A ILE 75 n 76 ILE 75 A SER 76 n 77 SER 76 A SER 77 n 78 SER 77 A LEU 78 n 79 LEU 78 A GLN 79 n 80 GLN 79 A PRO 80 n 81 PRO 80 A GLU 81 n 82 GLU 81 A ASP 82 n 83 ASP 82 A PHE 83 n 84 PHE 83 A ALA 84 n 85 ALA 84 A THR 85 n 86 THR 85 A TYR 86 n 87 TYR 86 A TYR 87 n 88 TYR 87 A CYS 88 n 89 CYS 88 A GLN 89 n 90 GLN 89 A GLN 90 n 91 GLN 90 A TYR 91 n 92 TYR 91 A SER 92 n 93 SER 92 A SER 93 n 94 SER 93 A TYR 94 n 95 TYR 94 A SER 95 n 96 SER 95 A SER 96 n 97 SER 96 A LEU 97 n 98 LEU 97 A PHE 98 n 99 PHE 98 A THR 99 n 100 THR 99 A PHE 100 n 101 PHE 100 A GLY 101 n 102 GLY 101 A GLN 102 n 103 GLN 102 A GLY 103 n 104 GLY 103 A THR 104 n 105 THR 104 A LYS 105 n 106 LYS 105 A VAL 106 n 107 VAL 106 A GLU 107 n 108 GLU 107 A ILE 108 n 109 ILE 108 A LYS 109 n 110 LYS 109 A ARG 110 n 111 ARG 110 A THR 111 n 112 THR 111 A VAL 112 n 113 VAL 112 A ALA 113 n 114 ALA 113 A ALA 114 n 115 ALA 114 A PRO 115 n 116 PRO 115 A SER 116 n 117 SER 116 A VAL 117 n 118 VAL 117 A PHE 118 n 119 PHE 118 A ILE 119 n 120 ILE 119 A PHE 120 n 121 PHE 120 A PRO 121 n 122 PRO 121 A PRO 122 n 123 PRO 122 A SER 123 n 124 SER 123 A ASP 124 n 125 ASP 124 A GLU 125 n 126 GLU 125 A GLN 126 n 127 GLN 126 A LEU 127 n 128 LEU 127 A LYS 128 n 129 LYS 128 A SER 129 n 130 SER 129 A GLY 130 n 131 GLY 130 A THR 131 n 132 THR 131 A ALA 132 n 133 ALA 132 A SER 133 n 134 SER 133 A VAL 134 n 135 VAL 134 A VAL 135 n 136 VAL 135 A CYS 136 n 137 CYS 136 A LEU 137 n 138 LEU 137 A LEU 138 n 139 LEU 138 A ASN 139 n 140 ASN 139 A ASN 140 n 141 ASN 140 A PHE 141 n 142 PHE 141 A TYR 142 n 143 TYR 142 A PRO 143 n 144 PRO 143 A ARG 144 n 145 ARG 144 A GLU 145 n 146 GLU 145 A ALA 146 n 147 ALA 146 A LYS 147 n 148 LYS 147 A VAL 148 n 149 VAL 148 A GLN 149 n 150 GLN 149 A TRP 150 n 151 TRP 150 A LYS 151 n 152 LYS 151 A VAL 152 n 153 VAL 152 A ASP 153 n 154 ASP 153 A ASN 154 n 155 ASN 154 A ALA 155 n 156 ALA 155 A LEU 156 n 157 LEU 156 A GLN 157 n 158 GLN 157 A SER 158 n 159 SER 158 A GLY 159 n 160 GLY 159 A ASN 160 n 161 ASN 160 A SER 161 n 162 SER 161 A GLN 162 n 163 GLN 162 A GLU 163 n 164 GLU 163 A SER 164 n 165 SER 164 A VAL 165 n 166 VAL 165 A THR 166 n 167 THR 166 A GLU 167 n 168 GLU 167 A GLN 168 n 169 GLN 168 A ASP 169 n 170 ASP 169 A SER 170 n 171 SER 170 A LYS 171 n 172 LYS 171 A ASP 172 n 173 ASP 172 A SER 173 n 174 SER 173 A THR 174 n 175 THR 174 A TYR 175 n 176 TYR 175 A SER 176 n 177 SER 176 A LEU 177 n 178 LEU 177 A SER 178 n 179 SER 178 A SER 179 n 180 SER 179 A THR 180 n 181 THR 180 A LEU 181 n 182 LEU 181 A THR 182 n 183 THR 182 A LEU 183 n 184 LEU 183 A SER 184 n 185 SER 184 A LYS 185 n 186 LYS 185 A ALA 186 n 187 ALA 186 A ASP 187 n 188 ASP 187 A TYR 188 n 189 TYR 188 A GLU 189 n 190 GLU 189 A LYS 190 n 191 LYS 190 A HIS 191 n 192 HIS 191 A LYS 192 n 193 LYS 192 A VAL 193 n 194 VAL 193 A TYR 194 n 195 TYR 194 A ALA 195 n 196 ALA 195 A CYS 196 n 197 CYS 196 A GLU 197 n 198 GLU 197 A VAL 198 n 199 VAL 198 A THR 199 n 200 THR 199 A HIS 200 n 201 HIS 200 A GLN 201 n 202 GLN 201 A GLY 202 n 203 GLY 202 A LEU 203 n 204 LEU 203 A SER 204 n 205 SER 204 A SER 205 n 206 SER 205 A PRO 206 n 207 PRO 206 A VAL 207 n 208 VAL 207 A THR 208 n 209 THR 208 A LYS 209 n 210 LYS 209 A SER 210 n 211 SER 210 A PHE 211 n 212 PHE 211 A ASN 212 n 213 ASN 212 A ARG 213 n 214 ARG 213 A GLY 214 n 215 GLY 214 A n 216 215 A n 217 216 A n 1 -2 B n 2 -1 B n 3 0 B GLU 1 n 4 GLU 1 B VAL 2 n 5 VAL 2 B GLN 3 n 6 GLN 3 B LEU 4 n 7 LEU 4 B VAL 5 n 8 VAL 5 B GLU 6 n 9 GLU 6 B SER 7 n 10 SER 7 B GLY 8 n 11 GLY 8 B GLY 9 n 12 GLY 9 B GLY 10 n 13 GLY 10 B LEU 11 n 14 LEU 11 B VAL 12 n 15 VAL 12 B GLN 13 n 16 GLN 13 B PRO 14 n 17 PRO 14 B GLY 15 n 18 GLY 15 B GLY 16 n 19 GLY 16 B SER 17 n 20 SER 17 B LEU 18 n 21 LEU 18 B ARG 19 n 22 ARG 19 B LEU 20 n 23 LEU 20 B SER 21 n 24 SER 21 B CYS 22 n 25 CYS 22 B ALA 23 n 26 ALA 23 B ALA 24 n 27 ALA 24 B SER 25 n 28 SER 25 B GLY 26 n 29 GLY 26 B PHE 27 n 30 PHE 27 B ASN 28 n 31 ASN 28 B VAL 29 n 32 VAL 29 B LYS 30 n 33 LYS 30 B THR 31 n 34 THR 31 B GLY 32 n 35 GLY 32 B LEU 33 n 36 LEU 33 B ILE 34 n 37 ILE 34 B HIS 35 n 38 HIS 35 B TRP 36 n 39 TRP 36 B VAL 37 n 40 VAL 37 B ARG 38 n 41 ARG 38 B GLN 39 n 42 GLN 39 B ALA 40 n 43 ALA 40 B PRO 41 n 44 PRO 41 B GLY 42 n 45 GLY 42 B LYS 43 n 46 LYS 43 B GLY 44 n 47 GLY 44 B LEU 45 n 48 LEU 45 B GLU 46 n 49 GLU 46 B TRP 47 n 50 TRP 47 B VAL 48 n 51 VAL 48 B ALA 49 n 52 ALA 49 B TYR 50 n 53 TYR 50 B ILE 51 n 54 ILE 51 B THR 52 n 55 THR 52 B PRO 53 n 56 PRO 53 B TYR 54 n 57 TYR 54 B TYR 55 n 58 TYR 55 B GLY 56 n 59 GLY 56 B SER 57 n 60 SER 57 B THR 58 n 61 THR 58 B SER 59 n 62 SER 59 B TYR 60 n 63 TYR 60 B ALA 61 n 64 ALA 61 B ASP 62 n 65 ASP 62 B SER 63 n 66 SER 63 B VAL 64 n 67 VAL 64 B LYS 65 n 68 LYS 65 B GLY 66 n 69 GLY 66 B ARG 67 n 70 ARG 67 B PHE 68 n 71 PHE 68 B THR 69 n 72 THR 69 B ILE 70 n 73 ILE 70 B SER 71 n 74 SER 71 B ALA 72 n 75 ALA 72 B ASP 73 n 76 ASP 73 B THR 74 n 77 THR 74 B SER 75 n 78 SER 75 B LYS 76 n 79 LYS 76 B ASN 77 n 80 ASN 77 B THR 78 n 81 THR 78 B ALA 79 n 82 ALA 79 B TYR 80 n 83 TYR 80 B LEU 81 n 84 LEU 81 B GLN 82 n 85 GLN 82 B MET 83 n 86 MET 83 B ASN 84 n 87 ASN 84 B SER 85 n 88 SER 85 B LEU 86 n 89 LEU 86 B ARG 87 n 90 ARG 87 B ALA 88 n 91 ALA 88 B GLU 89 n 92 GLU 89 B ASP 90 n 93 ASP 90 B THR 91 n 94 THR 91 B ALA 92 n 95 ALA 92 B VAL 93 n 96 VAL 93 B TYR 94 n 97 TYR 94 B TYR 95 n 98 TYR 95 B CYS 96 n 99 CYS 96 B ALA 97 n 100 ALA 97 B ARG 98 n 101 ARG 98 B GLU 99 n 102 GLU 99 B TYR 100 n 103 TYR 100 B TYR 101 n 104 TYR 101 B ARG 102 n 105 ARG 102 B TRP 103 n 106 TRP 103 B TYR 104 n 107 TYR 104 B THR 105 n 108 THR 105 B ALA 106 n 109 ALA 106 B ILE 107 n 110 ILE 107 B ASP 108 n 111 ASP 108 B TYR 109 n 112 TYR 109 B TRP 110 n 113 TRP 110 B GLY 111 n 114 GLY 111 B GLN 112 n 115 GLN 112 B GLY 113 n 116 GLY 113 B THR 114 n 117 THR 114 B LEU 115 n 118 LEU 115 B VAL 116 n 119 VAL 116 B THR 117 n 120 THR 117 B VAL 118 n 121 VAL 118 B SER 119 n 122 SER 119 B SER 120 n 123 SER 120 B ALA 121 n 124 ALA 121 B SER 122 n 125 SER 122 B THR 123 n 126 THR 123 B LYS 124 n 127 LYS 124 B GLY 125 n 128 GLY 125 B PRO 126 n 129 PRO 126 B SER 127 n 130 SER 127 B VAL 128 n 131 VAL 128 B PHE 129 n 132 PHE 129 B PRO 130 n 133 PRO 130 B LEU 131 n 134 LEU 131 B ALA 132 n 135 ALA 132 B PRO 133 n 136 PRO 133 B SER 134 n 137 SER 134 B SER 135 n 138 SER 135 B LYS 136 n 139 LYS 136 B SER 137 n 140 SER 137 B THR 138 n 141 THR 138 B SER 139 n 142 SER 139 B GLY 140 n 143 GLY 140 B GLY 141 n 144 GLY 141 B THR 142 n 145 THR 142 B ALA 143 n 146 ALA 143 B ALA 144 n 147 ALA 144 B LEU 145 n 148 LEU 145 B GLY 146 n 149 GLY 146 B CYS 147 n 150 CYS 147 B LEU 148 n 151 LEU 148 B VAL 149 n 152 VAL 149 B LYS 150 n 153 LYS 150 B ASP 151 n 154 ASP 151 B TYR 152 n 155 TYR 152 B PHE 153 n 156 PHE 153 B PRO 154 n 157 PRO 154 B GLU 155 n 158 GLU 155 B PRO 156 n 159 PRO 156 B VAL 157 n 160 VAL 157 B THR 158 n 161 THR 158 B VAL 159 n 162 VAL 159 B SER 160 n 163 SER 160 B TRP 161 n 164 TRP 161 B ASN 162 n 165 ASN 162 B SER 163 n 166 SER 163 B GLY 164 n 167 GLY 164 B ALA 165 n 168 ALA 165 B LEU 166 n 169 LEU 166 B THR 167 n 170 THR 167 B SER 168 n 171 SER 168 B GLY 169 n 172 GLY 169 B VAL 170 n 173 VAL 170 B HIS 171 n 174 HIS 171 B THR 172 n 175 THR 172 B PHE 173 n 176 PHE 173 B PRO 174 n 177 PRO 174 B ALA 175 n 178 ALA 175 B VAL 176 n 179 VAL 176 B LEU 177 n 180 LEU 177 B GLN 178 n 181 GLN 178 B SER 179 n 182 SER 179 B SER 180 n 183 SER 180 B GLY 181 n 184 GLY 181 B LEU 182 n 185 LEU 182 B TYR 183 n 186 TYR 183 B SER 184 n 187 SER 184 B LEU 185 n 188 LEU 185 B SER 186 n 189 SER 186 B SER 187 n 190 SER 187 B VAL 188 n 191 VAL 188 B VAL 189 n 192 VAL 189 B THR 190 n 193 THR 190 B VAL 191 n 194 VAL 191 B PRO 192 n 195 PRO 192 B SER 193 n 196 SER 193 B SER 194 n 197 SER 194 B SER 195 n 198 SER 195 B LEU 196 n 199 LEU 196 B GLY 197 n 200 GLY 197 B THR 198 n 201 THR 198 B GLN 199 n 202 GLN 199 B THR 200 n 203 THR 200 B TYR 201 n 204 TYR 201 B ILE 202 n 205 ILE 202 B CYS 203 n 206 CYS 203 B ASN 204 n 207 ASN 204 B VAL 205 n 208 VAL 205 B ASN 206 n 209 ASN 206 B HIS 207 n 210 HIS 207 B LYS 208 n 211 LYS 208 B PRO 209 n 212 PRO 209 B SER 210 n 213 SER 210 B ASN 211 n 214 ASN 211 B THR 212 n 215 THR 212 B LYS 213 n 216 LYS 213 B VAL 214 n 217 VAL 214 B ASP 215 n 218 ASP 215 B LYS 216 n 219 LYS 216 B LYS 217 n 220 LYS 217 B VAL 218 n 221 VAL 218 B GLU 219 n 222 GLU 219 B PRO 220 n 223 PRO 220 B ALA 221 n 224 LYS 221 B n 225 222 B n 226 223 B n 227 224 B n 228 225 B n 229 226 B n 230 227 B n 1 -2 X ALA -1 n 2 SER -1 X MET 0 n 3 HIS 0 X MET 1 n 4 MET 1 X GLN 2 n 5 GLN 2 X ILE 3 n 6 ILE 3 X PHE 4 n 7 PHE 4 X VAL 5 n 8 VAL 5 X LYS 6 n 9 LYS 6 X THR 7 n 10 THR 7 X LEU 8 n 11 LEU 8 X THR 9 n 12 THR 9 X GLY 10 n 13 GLY 10 X LYS 11 n 14 LYS 11 X THR 12 n 15 THR 12 X ILE 13 n 16 ILE 13 X THR 14 n 17 THR 14 X LEU 15 n 18 LEU 15 X GLU 16 n 19 GLU 16 X VAL 17 n 20 VAL 17 X GLU 18 n 21 GLU 18 X PRO 19 n 22 PRO 19 X SER 20 n 23 SER 20 X ASP 21 n 24 ASP 21 X THR 22 n 25 THR 22 X ILE 23 n 26 ILE 23 X GLU 24 n 27 GLU 24 X ASN 25 n 28 ASN 25 X VAL 26 n 29 VAL 26 X LYS 27 n 30 LYS 27 X ALA 28 n 31 ALA 28 X LYS 29 n 32 LYS 29 X ILE 30 n 33 ILE 30 X GLN 31 n 34 GLN 31 X ASP 32 n 35 ASP 32 X LYS 33 n 36 LYS 33 X GLU 34 n 37 GLU 34 X GLY 35 n 38 GLY 35 X ILE 36 n 39 ILE 36 X PRO 37 n 40 PRO 37 X PRO 38 n 41 PRO 38 X ASP 39 n 42 ASP 39 X GLN 40 n 43 GLN 40 X GLN 41 n 44 GLN 41 X ARG 42 n 45 ARG 42 X LEU 43 n 46 LEU 43 X ILE 44 n 47 ILE 44 X PHE 45 n 48 PHE 45 X ALA 46 n 49 ALA 46 X GLY 47 n 50 GLY 47 X LYS 48 n 51 LYS 48 X GLN 49 n 52 GLN 49 X LEU 50 n 53 LEU 50 X GLU 51 n 54 GLU 51 X ASP 52 n 55 ASP 52 X GLY 53 n 56 GLY 53 X ARG 54 n 57 ARG 54 X THR 55 n 58 THR 55 X LEU 56 n 59 LEU 56 X SER 57 n 60 SER 57 X ASP 58 n 61 ASP 58 X TYR 59 n 62 TYR 59 X ASN 60 n 63 ASN 60 X ILE 61 n 64 ILE 61 X GLN 62 n 65 GLN 62 X LYS 63 n 66 LYS 63 X GLU 64 n 67 GLU 64 X SER 65 n 68 SER 65 X THR 66 n 69 THR 66 X LEU 67 n 70 LEU 67 X HIS 68 n 71 HIS 68 X LEU 69 n 72 LEU 69 X VAL 70 n 73 VAL 70 X LEU 71 n 74 LEU 71 X ARG 72 n 75 ARG 72 X LEU 73 n 76 LEU 73 X n 77 74 X n 78 75 X n 79 76 X n 80 77 X n 1 -2 Y n 2 -1 Y n 3 0 Y MET 1 n 4 MET 1 Y GLN 2 n 5 GLN 2 Y ILE 3 n 6 ILE 3 Y PHE 4 n 7 PHE 4 Y VAL 5 n 8 VAL 5 Y LYS 6 n 9 LYS 6 Y THR 7 n 10 THR 7 Y LEU 8 n 11 LEU 8 Y THR 9 n 12 THR 9 Y GLY 10 n 13 GLY 10 Y LYS 11 n 14 LYS 11 Y THR 12 n 15 THR 12 Y ILE 13 n 16 ILE 13 Y THR 14 n 17 THR 14 Y LEU 15 n 18 LEU 15 Y GLU 16 n 19 GLU 16 Y VAL 17 n 20 VAL 17 Y GLU 18 n 21 GLU 18 Y PRO 19 n 22 PRO 19 Y SER 20 n 23 SER 20 Y ASP 21 n 24 ASP 21 Y THR 22 n 25 THR 22 Y ILE 23 n 26 ILE 23 Y GLU 24 n 27 GLU 24 Y ASN 25 n 28 ASN 25 Y VAL 26 n 29 VAL 26 Y LYS 27 n 30 LYS 27 Y ALA 28 n 31 ALA 28 Y LYS 29 n 32 LYS 29 Y ILE 30 n 33 ILE 30 Y GLN 31 n 34 GLN 31 Y ASP 32 n 35 ASP 32 Y LYS 33 n 36 LYS 33 Y GLU 34 n 37 GLU 34 Y GLY 35 n 38 GLY 35 Y ILE 36 n 39 ILE 36 Y PRO 37 n 40 PRO 37 Y PRO 38 n 41 PRO 38 Y ASP 39 n 42 ASP 39 Y GLN 40 n 43 GLN 40 Y GLN 41 n 44 GLN 41 Y ARG 42 n 45 ARG 42 Y LEU 43 n 46 LEU 43 Y ILE 44 n 47 ILE 44 Y PHE 45 n 48 PHE 45 Y ALA 46 n 49 ALA 46 Y GLY 47 n 50 GLY 47 Y LYS 48 n 51 LYS 48 Y GLN 49 n 52 GLN 49 Y LEU 50 n 53 LEU 50 Y GLU 51 n 54 GLU 51 Y ASP 52 n 55 ASP 52 Y GLY 53 n 56 GLY 53 Y ARG 54 n 57 ARG 54 Y THR 55 n 58 THR 55 Y LEU 56 n 59 LEU 56 Y SER 57 n 60 SER 57 Y ASP 58 n 61 ASP 58 Y TYR 59 n 62 TYR 59 Y ASN 60 n 63 ASN 60 Y ILE 61 n 64 ILE 61 Y GLN 62 n 65 GLN 62 Y ARG 63 n 66 ARG 63 Y GLU 64 n 67 GLU 64 Y SER 65 n 68 SER 65 Y THR 66 n 69 THR 66 Y LEU 67 n 70 LEU 67 Y HIS 68 n 71 HIS 68 Y LEU 69 n 72 LEU 69 Y VAL 70 n 73 VAL 70 Y LEU 71 n 74 LEU 71 Y ARG 72 n 75 ARG 72 Y LEU 73 n 76 LEU 73 Y ARG 74 n 77 ARG 74 Y GLY 75 n 78 GLY 75 Y GLY 76 n 79 GLY 76 Y 2.7630 -0.0205 0.7631 5.0940 -0.1715 1.4026 0.0515 -0.1077 0.1945 0.0562 0.0475 0.3214 -0.0832 0.1254 -0.0990 -0.4661 -0.1367 -0.1498 0.0236 0.0439 -0.2159 refined 7.1176 40.5591 19.1880 X-RAY DIFFRACTION 2.8373 1.2816 -0.1652 3.4934 -0.1708 2.4087 0.1232 0.0070 0.0329 0.1583 -0.3056 0.2486 0.1058 -0.2329 0.1823 -0.5061 -0.1088 -0.1956 -0.0205 -0.0137 -0.0942 refined -19.5631 21.8648 7.4817 X-RAY DIFFRACTION 5.7950 -1.3352 -1.0324 7.9342 1.8272 5.4564 0.1045 -0.8064 0.5003 0.8926 0.3367 -0.7035 -0.6018 0.5376 -0.4412 -0.1063 -0.2677 -0.3387 0.4029 -0.0667 -0.1200 refined 29.6096 51.1761 35.3372 X-RAY DIFFRACTION A 5 A 109 X-RAY DIFFRACTION 1 B 1 B 112 X-RAY DIFFRACTION 1 A 110 A 214 X-RAY DIFFRACTION 2 B 113 B 221 X-RAY DIFFRACTION 2 X 1 X 73 X-RAY DIFFRACTION 3 Y 1 Y 76 X-RAY DIFFRACTION 3 author_defined_assembly 4 tetrameric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N LEU 11 A N LEU 12 A O LYS 105 A O LYS 106 A O THR 104 A O THR 105 A N TYR 86 A N TYR 87 A O THR 85 A O THR 86 A N GLN 38 A N GLN 39 A N TRP 35 A N TRP 36 A O LEU 47 A O LEU 48 A N TYR 49 A N TYR 50 A O SER 53 A O SER 54 A N LEU 11 A N LEU 12 A O LYS 105 A O LYS 106 A O THR 104 A O THR 105 A N TYR 86 A N TYR 87 A N GLN 90 A N GLN 91 A O THR 99 A O THR 100 A N CYS 23 A N CYS 24 A O PHE 71 A O PHE 72 A O THR 72 A O THR 73 A N SER 65 A N SER 66 A N PHE 118 A N PHE 119 A O LEU 137 A O LEU 138 A N LEU 138 A N LEU 139 A O LEU 177 A O LEU 178 A O THR 180 A O THR 181 A N GLN 162 A N GLN 163 A O ALA 155 A O ALA 156 A N VAL 152 A N VAL 153 A N GLN 149 A N GLN 150 A O GLU 197 A O GLU 198 A N CYS 196 A N CYS 197 A O LYS 209 A O LYS 210 B N SER 7 B N SER 10 B O SER 21 B O SER 24 B N LEU 18 B N LEU 21 B O MET 83 B O MET 86 B O TYR 80 B O TYR 83 B N SER 71 B N SER 74 B N GLY 10 B N GLY 13 B O THR 117 B O THR 120 B O VAL 116 B O VAL 119 B N ALA 92 B N ALA 95 B O TYR 95 B O TYR 98 B N VAL 37 B N VAL 40 B N ARG 38 B N ARG 41 B O GLU 46 B O GLU 49 B N TYR 50 B N TYR 53 B O SER 59 B O SER 62 B N GLY 10 B N GLY 13 B O THR 117 B O THR 120 B O VAL 116 B O VAL 119 B N ALA 92 B N ALA 95 B N ARG 98 B N ARG 101 B O ASP 108 B O ASP 111 B N PHE 129 B N PHE 132 B O LEU 148 B O LEU 151 B N ALA 143 B N ALA 146 B O VAL 191 B O VAL 194 B O VAL 188 B O VAL 191 B N HIS 171 B N HIS 174 B N SER 139 B N SER 142 B O THR 142 B O THR 145 B N ALA 143 B N ALA 146 B O VAL 191 B O VAL 194 B O SER 184 B O SER 187 B N VAL 176 B N VAL 179 B N SER 160 B N SER 163 B O ASN 204 B O ASN 207 B N VAL 205 B N VAL 208 B O VAL 214 B O VAL 217 X O VAL 17 C O VAL 20 X N MET 1 C N MET 4 X N LYS 6 C N LYS 9 X O LEU 67 C O LEU 70 X O HIS 68 C O HIS 71 X N ILE 44 C N ILE 47 X N PHE 45 C N PHE 48 X O LYS 48 C O LYS 51 Y O ILE 13 D O ILE 16 Y N VAL 5 D N VAL 8 Y N LYS 6 D N LYS 9 Y O LEU 67 D O LEU 70 Y O VAL 70 D O VAL 73 Y N ARG 42 D N ARG 45 Y N PHE 45 D N PHE 48 Y O LYS 48 D O LYS 51 1 B CG LYS 221 B CG LYS 224 1 Y 1 B CD LYS 221 B CD LYS 224 1 Y 1 B CE LYS 221 B CE LYS 224 1 Y 1 B NZ LYS 221 B NZ LYS 224 1 Y 1 X OG SER -1 C OG SER 2 1 Y 1 X CG HIS 0 C CG HIS 3 1 Y 1 X ND1 HIS 0 C ND1 HIS 3 1 Y 1 X CD2 HIS 0 C CD2 HIS 3 1 Y 1 X CE1 HIS 0 C CE1 HIS 3 1 Y 1 X NE2 HIS 0 C NE2 HIS 3 1 Y 1 A SER 0 A SER 1 1 Y 1 A ASP 1 A ASP 2 1 Y 1 A ILE 2 A ILE 3 1 Y 1 A GLN 3 A GLN 4 1 Y 1 A MET 4 A MET 5 1 Y 1 A GLU 215 A GLU 216 1 Y 1 A CYS 216 A CYS 217 1 Y 1 B GLU -2 B GLU 1 1 Y 1 B ILE -1 B ILE 2 1 Y 1 B SER 0 B SER 3 1 Y 1 B SER 222 B SER 225 1 Y 1 B CYS 223 B CYS 226 1 Y 1 B ASP 224 B ASP 227 1 Y 1 B LYS 225 B LYS 228 1 Y 1 B THR 226 B THR 229 1 Y 1 B HIS 227 B HIS 230 1 Y 1 X GLY -2 C GLY 1 1 Y 1 X ARG 74 C ARG 77 1 Y 1 X GLY 75 C GLY 78 1 Y 1 X GLY 76 C GLY 79 1 Y 1 X ASP 77 C ASP 80 1 Y 1 Y GLY -2 D GLY 1 1 Y 1 Y SER -1 D SER 2 1 Y 1 Y HIS 0 D HIS 3 1 Y 1 X X C O GLY GLY 10 10 0.173 0.016 1.232 1.405 N 1 X X C N GLY LYS 10 11 0.157 0.023 1.336 1.493 Y 1 X X C O LEU LEU 73 73 0.125 0.019 1.229 1.354 N 1 A ALA 51 70.14 -45.08 1 A ARG 52 -141.64 21.61 1 A ALA 84 -165.51 -162.26 1 A ARG 213 -32.99 111.75 1 B SER 63 -67.04 2.26 1 B VAL 64 -141.04 -22.56 1 B THR 105 100.14 -22.72 1 B SER 134 -171.80 -179.74 1 B LYS 136 -62.68 6.31 1 B SER 137 -145.34 20.30 1 B ASP 151 63.44 61.43 1 B SER 163 56.26 17.51 1 B THR 198 -134.43 -46.09 1 Y THR 7 -91.18 -138.87 1 Y ALA 46 60.41 -2.28 1 Y ASP 52 -73.95 34.17 1 Y ASN 60 49.15 73.41 64.091 0.939 0.913 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.26079 0.21917 0.22355 2.60 48.00 2441 21569 21569 10.2 97.91 29.626 0.287 RANDOM LIKELY RESIDUAL 1 THROUGHOUT 0 -3 MOLECULAR REPLACEMENT 0.666 0.323 0.80 0.80 1.40 MAXIMUM LIKELIHOOD MASK 2.60 48.00 25 4491 0 0 4466 0.009 0.022 4564 1.131 1.963 6196 5.592 5.000 578 35.827 24.309 181 18.512 15.000 772 17.486 15.000 22 0.078 0.200 711 0.003 0.020 3388 0.193 0.200 1693 0.302 0.200 3017 0.120 0.200 152 0.173 0.200 40 0.097 0.200 5 2.141 2.500 2977 3.357 5.000 4686 2.159 2.500 1821 3.124 5.000 1510 0.425 0.317 2.655 139 1231 25 94.16 2.6 50 3DVG 24012 24012 0 -3 0.051 1 3.8 98.1 2.60 2.69 1.8 2380 0.58 1 3.9 97.9 refinement REFMAC 5.2.0019 data collection Blu-Ice data reduction HKL-2000 data scaling HKL-2000 phasing PHASER Crystal structure of K63-specific fab Apu.3A8 bound to K63-linked di-ubiquitin 1 N N 2 N N 3 N N 4 N N 5 N N 5 N N A GLN 79 A GLN 80 HELX_P A PHE 83 A PHE 84 5 1 5 A SER 123 A SER 124 HELX_P A LYS 128 A LYS 129 1 2 6 A LYS 185 A LYS 186 HELX_P A LYS 190 A LYS 191 1 3 6 B ASN 28 B ASN 31 HELX_P B GLY 32 B GLY 35 5 4 5 B ARG 87 B ARG 90 HELX_P B THR 91 B THR 94 5 5 5 B TYR 101 B TYR 104 HELX_P B TYR 104 B TYR 107 5 6 4 B SER 134 B SER 137 HELX_P B LYS 136 B LYS 139 5 7 3 B SER 163 B SER 166 HELX_P B ALA 165 B ALA 168 5 8 3 B SER 194 B SER 197 HELX_P B LEU 196 B LEU 199 5 9 3 B LYS 208 B LYS 211 HELX_P B ASN 211 B ASN 214 5 10 4 X THR 22 C THR 25 HELX_P X GLY 35 C GLY 38 1 11 14 X PRO 37 C PRO 40 HELX_P X ASP 39 C ASP 42 5 12 3 X LEU 56 C LEU 59 HELX_P X ASN 60 C ASN 63 5 13 5 Y THR 22 D THR 25 HELX_P Y GLY 35 D GLY 38 1 14 14 Y PRO 37 D PRO 40 HELX_P Y ASP 39 D ASP 42 5 15 3 disulf 2.064 A CYS 23 A SG CYS 24 1_555 A CYS 88 A SG CYS 89 1_555 disulf 2.034 A CYS 136 A SG CYS 137 1_555 A CYS 196 A SG CYS 197 1_555 disulf 2.040 B CYS 22 B SG CYS 25 1_555 B CYS 96 B SG CYS 99 1_555 disulf 2.047 B CYS 147 B SG CYS 150 1_555 B CYS 203 B SG CYS 206 1_555 covale 1.488 one X LYS 63 C NZ LYS 66 1_555 Y GLY 76 D C GLY 79 1_555 IMMUNE SYSTEM di-ubiquitin, fab fragment, antibody, Nucleus, Phosphoprotein, Ribosomal protein, IMMUNE SYSTEM A TYR 142 A TYR 143 1 A PRO 143 A PRO 144 -1.06 B PHE 153 B PHE 156 1 B PRO 154 B PRO 157 -9.98 B GLU 155 B GLU 158 1 B PRO 156 B PRO 159 -3.29 3DVG PDB 1 1 3DVG SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSARSLYSGVPSRFSGSRSGTDFTLTISSLQ PEDFATYYCQQYSSYSSLFTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSG NSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC 3DVG PDB 2 1 3DVG EISEVQLVESGGGLVQPGGSLRLSCAASGFNVKTGLIHWVRQAPGKGLEWVAYITPYYGSTSYADSVKGRFTISADTSKN TAYLQMNSLRAEDTAVYYCAREYYRWYTAIDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH UBIQ_HUMAN UNP 3 1 P62988 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG UBIQ_HUMAN UNP 4 1 P62988 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 0 216 3DVG 0 216 3DVG A 1 1 217 -2 227 3DVG -2 227 3DVG B 2 1 230 1 76 3DVG 1 76 P62988 X 3 4 79 1 76 3DVG 1 76 P62988 Y 4 4 79 3 expression tag GLY -2 3DVG X P62988 UNP 1 3 expression tag SER -1 3DVG X P62988 UNP 2 3 expression tag HIS 0 3DVG X P62988 UNP 3 3 engineered mutation ASP 77 3DVG X P62988 UNP 80 4 expression tag GLY -2 3DVG Y P62988 UNP 1 4 expression tag SER -1 3DVG Y P62988 UNP 2 4 expression tag HIS 0 3DVG Y P62988 UNP 3 4 LYS engineered mutation ARG 63 3DVG Y P62988 UNP 63 66 6 4 3 4 4 4 6 4 4 4 3 5 5 parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel A SER 9 A SER 10 A ALA 13 A ALA 14 A THR 104 A THR 105 A ILE 108 A ILE 109 A THR 85 A THR 86 A TYR 91 A TYR 92 A ALA 34 A ALA 35 A GLN 38 A GLN 39 A LYS 45 A LYS 46 A TYR 49 A TYR 50 A SER 53 A SER 54 A LEU 54 A LEU 55 A SER 9 A SER 10 A ALA 13 A ALA 14 A THR 104 A THR 105 A ILE 108 A ILE 109 A THR 85 A THR 86 A TYR 91 A TYR 92 A PHE 98 A PHE 99 A PHE 100 A PHE 101 A VAL 19 A VAL 20 A CYS 23 A CYS 24 A ASP 70 A ASP 71 A ILE 75 A ILE 76 A PHE 62 A PHE 63 A SER 67 A SER 68 A SER 116 A SER 117 A PHE 120 A PHE 121 A THR 131 A THR 132 A PHE 141 A PHE 142 A TYR 175 A TYR 176 A SER 184 A SER 185 A SER 161 A SER 162 A VAL 165 A VAL 166 A ALA 155 A ALA 156 A LEU 156 A LEU 157 A LYS 147 A LYS 148 A VAL 152 A VAL 153 A VAL 193 A VAL 194 A THR 199 A THR 200 A VAL 207 A VAL 208 A ASN 212 A ASN 213 B GLN 3 B GLN 6 B SER 7 B SER 10 B LEU 18 B LEU 21 B SER 25 B SER 28 B THR 78 B THR 81 B MET 83 B MET 86 B PHE 68 B PHE 71 B ASP 73 B ASP 76 B GLY 10 B GLY 13 B VAL 12 B VAL 15 B THR 114 B THR 117 B VAL 118 B VAL 121 B ALA 92 B ALA 95 B GLU 99 B GLU 102 B LEU 33 B LEU 36 B GLN 39 B GLN 42 B LEU 45 B LEU 48 B ILE 51 B ILE 54 B THR 58 B THR 61 B TYR 60 B TYR 63 B GLY 10 B GLY 13 B VAL 12 B VAL 15 B THR 114 B THR 117 B VAL 118 B VAL 121 B ALA 92 B ALA 95 B GLU 99 B GLU 102 B ILE 107 B ILE 110 B TRP 110 B TRP 113 B SER 127 B SER 130 B LEU 131 B LEU 134 B THR 142 B THR 145 B TYR 152 B TYR 155 B TYR 183 B TYR 186 B PRO 192 B PRO 195 B VAL 170 B VAL 173 B THR 172 B THR 175 B THR 138 B THR 141 B SER 139 B SER 142 B THR 142 B THR 145 B TYR 152 B TYR 155 B TYR 183 B TYR 186 B PRO 192 B PRO 195 B VAL 176 B VAL 179 B LEU 177 B LEU 180 B THR 158 B THR 161 B TRP 161 B TRP 164 B ILE 202 B ILE 205 B HIS 207 B HIS 210 B THR 212 B THR 215 B LYS 217 B LYS 220 X THR 12 C THR 15 X VAL 17 C VAL 20 X MET 1 C MET 4 X THR 7 C THR 10 X THR 66 C THR 69 X LEU 71 C LEU 74 X GLN 41 C GLN 44 X PHE 45 C PHE 48 X LYS 48 C LYS 51 X GLN 49 C GLN 52 Y ILE 13 D ILE 16 Y GLU 16 D GLU 19 Y GLN 2 D GLN 5 Y LYS 6 D LYS 9 Y THR 66 D THR 69 Y LEU 71 D LEU 74 Y GLN 41 D GLN 44 Y PHE 45 D PHE 48 Y LYS 48 D LYS 51 Y GLN 49 D GLN 52 5 C 1 2 1