0.022510 0.000000 0.002630 0.000000 0.018820 0.000000 0.000000 0.000000 0.015717 0.00000 0.00000 0.00000 Sinha, S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 96.67 90.00 44.424 53.134 64.059 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 R C N 309 N O N 310 N C N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N N Y 330 N C Y 331 N C Y 332 N C Y 333 N C Y 334 N C N 335 N O N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C Y 353 N C Y 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C N 359 N O N 360 N O N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N N N 373 S C N 374 N C N 375 N O N 376 N C N 377 N C N 378 N C N 379 N O N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub Y 322 N sing Y 323 N sing N 324 N sing Y 325 N sing Y 326 N doub N 327 N sing Y 328 N doub N 329 N sing Y 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing Y 345 N doub Y 346 N sing Y 347 N sing N 348 N sing Y 349 N doub N 350 N sing Y 351 N doub N 352 N sing Y 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing US Autophagy 1554-8635 4 989 997 10.4161/auto.6803 18797192 Molecular basis of the regulation of Beclin 1-dependent autophagy by the gamma-herpesvirus 68 Bcl-2 homolog M11. 2008 10.2210/pdb3dvu/pdb pdb_00003dvu 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2007-12-16 CUSTOM-MADE SINGLE WAVELENGTH M x-ray 1 0.97874 1.0 19-ID APS 0.97874 SYNCHROTRON APS BEAMLINE 19-ID 16652.883 V-bcl-2 residues 2-136 2 man polymer 2845.193 Beclin-1 BH3 domain, residues 105-130 2 syn polymer 18.015 water 94 nat water Bcl-2 homolog, Gene 16?, M11 Coiled-coil myosin-like BCL2-interacting protein, Protein GT197 no no MASHKKSGTYWATLITAFLKTVSKVEELDCVDSAVLVDVSKIITLTQEFRRHYDSVYRADYGPALKNWKRDLSKLFTSLF VDVINSGRIVGFFDVGRYVCEEVLCPGSWTEDHELLNDCMTHFFIENNLMNHFPLEDHHHHHH MASHKKSGTYWATLITAFLKTVSKVEELDCVDSAVLVDVSKIITLTQEFRRHYDSVYRADYGPALKNWKRDLSKLFTSLF VDVINSGRIVGFFDVGRYVCEEVLCPGSWTEDHELLNDCMTHFFIENNLMNHFPLEDHHHHHH A,B polypeptide(L) no no DGGTMENLSRRLKVTGDLFDIMSGQT DGGTMENLSRRLKVTGDLFDIMSGQT C,D polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n MuHV-4 sample v-bcl-2, GAMMAHV.M11, M11 33708 Murid herpesvirus 4 469008 Escherichia coli BL21(DE3) PLASMID pET21(d+) 1 1.93 36.12 VAPOR DIFFUSION, HANGING DROP 4.5 20% PEG 3350, 0.1M sodium acetate, pH 4.5, 10mM magnesium chloride, VAPOR DIFFUSION, HANGING DROP, temperature 293K 293 software citation struct_ref_seq_dif chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model repository Initial release Version format compliance Refinement description Data collection Database references Data collection Database references Refinement description 1 0 2008-10-07 1 1 2011-07-13 1 2 2017-10-25 1 3 2019-11-06 1 4 2023-11-01 _citation.journal_id_ISSN _citation.pdbx_database_id_DOI _citation.title _struct_ref_seq_dif.details _database_2.pdbx_DOI _database_2.pdbx_database_accession Same Structure RCSB Y PDBJ 2008-07-20 REL REL HOH water Peptide synthesis; The peptide corresponding to human Beclin 1 residues 105-130 was chemically synthesized. sample 2ABO PDB ENTRY 2ABO with residues 52-73 removed. PDB experimental model HOH 2 3 HOH HOH 143 A HOH 5 3 HOH HOH 144 A HOH 7 3 HOH HOH 145 A HOH 9 3 HOH HOH 146 A HOH 11 3 HOH HOH 147 A HOH 13 3 HOH HOH 148 A HOH 16 3 HOH HOH 149 A HOH 20 3 HOH HOH 150 A HOH 22 3 HOH HOH 151 A HOH 23 3 HOH HOH 152 A HOH 25 3 HOH HOH 153 A HOH 34 3 HOH HOH 154 A HOH 35 3 HOH HOH 155 A HOH 36 3 HOH HOH 156 A HOH 37 3 HOH HOH 157 A HOH 39 3 HOH HOH 158 A HOH 40 3 HOH HOH 159 A HOH 41 3 HOH HOH 160 A HOH 44 3 HOH HOH 161 A HOH 45 3 HOH HOH 162 A HOH 46 3 HOH HOH 163 A HOH 49 3 HOH HOH 164 A HOH 51 3 HOH HOH 165 A HOH 53 3 HOH HOH 166 A HOH 56 3 HOH HOH 167 A HOH 63 3 HOH HOH 168 A HOH 67 3 HOH HOH 169 A HOH 68 3 HOH HOH 170 A HOH 69 3 HOH HOH 171 A HOH 70 3 HOH HOH 172 A HOH 71 3 HOH HOH 173 A HOH 73 3 HOH HOH 174 A HOH 76 3 HOH HOH 175 A HOH 86 3 HOH HOH 176 A HOH 88 3 HOH HOH 177 A HOH 89 3 HOH HOH 178 A HOH 90 3 HOH HOH 179 A HOH 93 3 HOH HOH 180 A HOH 8 3 HOH HOH 146 B HOH 26 3 HOH HOH 147 B HOH 66 3 HOH HOH 148 B HOH 72 3 HOH HOH 149 B HOH 1 3 HOH HOH 150 B HOH 3 3 HOH HOH 151 B HOH 6 3 HOH HOH 152 B HOH 12 3 HOH HOH 153 B HOH 14 3 HOH HOH 154 B HOH 15 3 HOH HOH 155 B HOH 17 3 HOH HOH 156 B HOH 18 3 HOH HOH 157 B HOH 21 3 HOH HOH 158 B HOH 24 3 HOH HOH 159 B HOH 27 3 HOH HOH 160 B HOH 28 3 HOH HOH 161 B HOH 30 3 HOH HOH 162 B HOH 31 3 HOH HOH 163 B HOH 32 3 HOH HOH 164 B HOH 38 3 HOH HOH 165 B HOH 43 3 HOH HOH 166 B HOH 47 3 HOH HOH 167 B HOH 48 3 HOH HOH 168 B HOH 50 3 HOH HOH 169 B HOH 52 3 HOH HOH 170 B HOH 55 3 HOH HOH 171 B HOH 58 3 HOH HOH 172 B HOH 60 3 HOH HOH 173 B HOH 61 3 HOH HOH 174 B HOH 62 3 HOH HOH 175 B HOH 74 3 HOH HOH 176 B HOH 75 3 HOH HOH 177 B HOH 77 3 HOH HOH 178 B HOH 78 3 HOH HOH 179 B HOH 79 3 HOH HOH 180 B HOH 80 3 HOH HOH 181 B HOH 81 3 HOH HOH 182 B HOH 83 3 HOH HOH 183 B HOH 84 3 HOH HOH 184 B HOH 87 3 HOH HOH 185 B HOH 92 3 HOH HOH 186 B HOH 19 3 HOH HOH 131 C HOH 29 3 HOH HOH 132 C HOH 57 3 HOH HOH 133 C HOH 64 3 HOH HOH 134 C HOH 85 3 HOH HOH 135 C HOH 94 3 HOH HOH 136 C HOH 4 3 HOH HOH 131 D HOH 10 3 HOH HOH 132 D HOH 33 3 HOH HOH 133 D HOH 42 3 HOH HOH 134 D HOH 54 3 HOH HOH 135 D HOH 59 3 HOH HOH 136 D HOH 65 3 HOH HOH 137 D HOH 82 3 HOH HOH 138 D HOH 91 3 HOH HOH 139 D n 1 0 A n 2 1 A n 3 2 A n 4 3 A n 5 4 A LYS 5 n 6 LYS 5 A SER 6 n 7 SER 6 A GLY 7 n 8 GLY 7 A THR 8 n 9 THR 8 A TYR 9 n 10 TYR 9 A TRP 10 n 11 TRP 10 A ALA 11 n 12 ALA 11 A THR 12 n 13 THR 12 A LEU 13 n 14 LEU 13 A ILE 14 n 15 ILE 14 A THR 15 n 16 THR 15 A ALA 16 n 17 ALA 16 A PHE 17 n 18 PHE 17 A LEU 18 n 19 LEU 18 A LYS 19 n 20 LYS 19 A THR 20 n 21 THR 20 A VAL 21 n 22 VAL 21 A SER 22 n 23 SER 22 A LYS 23 n 24 LYS 23 A VAL 24 n 25 VAL 24 A GLU 25 n 26 GLU 25 A GLU 26 n 27 GLU 26 A LEU 27 n 28 LEU 27 A ASP 28 n 29 ASP 28 A CYS 29 n 30 CYS 29 A VAL 30 n 31 VAL 30 A ASP 31 n 32 ASP 31 A SER 32 n 33 SER 32 A ALA 33 n 34 ALA 33 A VAL 34 n 35 VAL 34 A LEU 35 n 36 LEU 35 A VAL 36 n 37 VAL 36 A ASP 37 n 38 ASP 37 A VAL 38 n 39 VAL 38 A SER 39 n 40 SER 39 A LYS 40 n 41 LYS 40 A ILE 41 n 42 ILE 41 A ILE 42 n 43 ILE 42 A THR 43 n 44 THR 43 A LEU 44 n 45 LEU 44 A THR 45 n 46 THR 45 A GLN 46 n 47 GLN 46 A GLU 47 n 48 GLU 47 A PHE 48 n 49 PHE 48 A ARG 49 n 50 ARG 49 A ARG 50 n 51 ARG 50 A HIS 51 n 52 HIS 51 A TYR 52 n 53 TYR 52 A ASP 53 n 54 ASP 53 A SER 54 n 55 SER 54 A VAL 55 n 56 VAL 55 A TYR 56 n 57 TYR 56 A ARG 57 n 58 ARG 57 A ALA 58 n 59 ALA 58 A ASP 59 n 60 ASP 59 A TYR 60 n 61 TYR 60 A GLY 61 n 62 GLY 61 A PRO 62 n 63 PRO 62 A ALA 63 n 64 ALA 63 A LEU 64 n 65 LEU 64 A LYS 65 n 66 LYS 65 A ASN 66 n 67 ASN 66 A TRP 67 n 68 TRP 67 A LYS 68 n 69 LYS 68 A ARG 69 n 70 ARG 69 A ASP 70 n 71 ASP 70 A LEU 71 n 72 LEU 71 A SER 72 n 73 SER 72 A LYS 73 n 74 LYS 73 A LEU 74 n 75 LEU 74 A PHE 75 n 76 PHE 75 A THR 76 n 77 THR 76 A SER 77 n 78 SER 77 A LEU 78 n 79 LEU 78 A PHE 79 n 80 PHE 79 A VAL 80 n 81 VAL 80 A ASP 81 n 82 ASP 81 A VAL 82 n 83 VAL 82 A ILE 83 n 84 ILE 83 A ASN 84 n 85 ASN 84 A SER 85 n 86 SER 85 A GLY 86 n 87 GLY 86 A ARG 87 n 88 ARG 87 A ILE 88 n 89 ILE 88 A VAL 89 n 90 VAL 89 A GLY 90 n 91 GLY 90 A PHE 91 n 92 PHE 91 A PHE 92 n 93 PHE 92 A ASP 93 n 94 ASP 93 A VAL 94 n 95 VAL 94 A GLY 95 n 96 GLY 95 A ARG 96 n 97 ARG 96 A TYR 97 n 98 TYR 97 A VAL 98 n 99 VAL 98 A CYS 99 n 100 CYS 99 A GLU 100 n 101 GLU 100 A GLU 101 n 102 GLU 101 A VAL 102 n 103 VAL 102 A LEU 103 n 104 LEU 103 A CYS 104 n 105 CYS 104 A PRO 105 n 106 PRO 105 A GLY 106 n 107 GLY 106 A SER 107 n 108 SER 107 A TRP 108 n 109 TRP 108 A THR 109 n 110 THR 109 A GLU 110 n 111 GLU 110 A ASP 111 n 112 ASP 111 A HIS 112 n 113 HIS 112 A GLU 113 n 114 GLU 113 A LEU 114 n 115 LEU 114 A LEU 115 n 116 LEU 115 A ASN 116 n 117 ASN 116 A ASP 117 n 118 ASP 117 A CYS 118 n 119 CYS 118 A MET 119 n 120 MET 119 A THR 120 n 121 THR 120 A HIS 121 n 122 HIS 121 A PHE 122 n 123 PHE 122 A PHE 123 n 124 PHE 123 A ILE 124 n 125 ILE 124 A GLU 125 n 126 GLU 125 A ASN 126 n 127 ASN 126 A ASN 127 n 128 ASN 127 A LEU 128 n 129 LEU 128 A MET 129 n 130 MET 129 A ASN 130 n 131 ASN 130 A HIS 131 n 132 HIS 131 A PHE 132 n 133 PHE 132 A PRO 133 n 134 PRO 133 A LEU 134 n 135 LEU 134 A n 136 135 A n 137 136 A n 138 137 A n 139 138 A n 140 139 A n 141 140 A n 142 141 A n 143 142 A n 1 0 B n 2 1 B n 3 2 B n 4 3 B n 5 4 B LYS 5 n 6 LYS 5 B SER 6 n 7 SER 6 B GLY 7 n 8 GLY 7 B THR 8 n 9 THR 8 B TYR 9 n 10 TYR 9 B TRP 10 n 11 TRP 10 B ALA 11 n 12 ALA 11 B THR 12 n 13 THR 12 B LEU 13 n 14 LEU 13 B ILE 14 n 15 ILE 14 B THR 15 n 16 THR 15 B ALA 16 n 17 ALA 16 B PHE 17 n 18 PHE 17 B LEU 18 n 19 LEU 18 B LYS 19 n 20 LYS 19 B THR 20 n 21 THR 20 B VAL 21 n 22 VAL 21 B SER 22 n 23 SER 22 B LYS 23 n 24 LYS 23 B VAL 24 n 25 VAL 24 B GLU 25 n 26 GLU 25 B GLU 26 n 27 GLU 26 B LEU 27 n 28 LEU 27 B ASP 28 n 29 ASP 28 B CYS 29 n 30 CYS 29 B VAL 30 n 31 VAL 30 B ASP 31 n 32 ASP 31 B SER 32 n 33 SER 32 B ALA 33 n 34 ALA 33 B VAL 34 n 35 VAL 34 B LEU 35 n 36 LEU 35 B VAL 36 n 37 VAL 36 B ASP 37 n 38 ASP 37 B VAL 38 n 39 VAL 38 B SER 39 n 40 SER 39 B LYS 40 n 41 LYS 40 B ILE 41 n 42 ILE 41 B ILE 42 n 43 ILE 42 B THR 43 n 44 THR 43 B LEU 44 n 45 LEU 44 B THR 45 n 46 THR 45 B GLN 46 n 47 GLN 46 B GLU 47 n 48 GLU 47 B PHE 48 n 49 PHE 48 B ARG 49 n 50 ARG 49 B ARG 50 n 51 ARG 50 B HIS 51 n 52 HIS 51 B TYR 52 n 53 TYR 52 B ASP 53 n 54 ASP 53 B SER 54 n 55 SER 54 B VAL 55 n 56 VAL 55 B TYR 56 n 57 TYR 56 B ARG 57 n 58 ARG 57 B ALA 58 n 59 ALA 58 B ASP 59 n 60 ASP 59 B TYR 60 n 61 TYR 60 B GLY 61 n 62 GLY 61 B PRO 62 n 63 PRO 62 B ALA 63 n 64 ALA 63 B LEU 64 n 65 LEU 64 B LYS 65 n 66 LYS 65 B ASN 66 n 67 ASN 66 B TRP 67 n 68 TRP 67 B LYS 68 n 69 LYS 68 B ARG 69 n 70 ARG 69 B ASP 70 n 71 ASP 70 B LEU 71 n 72 LEU 71 B SER 72 n 73 SER 72 B LYS 73 n 74 LYS 73 B LEU 74 n 75 LEU 74 B PHE 75 n 76 PHE 75 B THR 76 n 77 THR 76 B SER 77 n 78 SER 77 B LEU 78 n 79 LEU 78 B PHE 79 n 80 PHE 79 B VAL 80 n 81 VAL 80 B ASP 81 n 82 ASP 81 B VAL 82 n 83 VAL 82 B ILE 83 n 84 ILE 83 B ASN 84 n 85 ASN 84 B SER 85 n 86 SER 85 B GLY 86 n 87 GLY 86 B ARG 87 n 88 ARG 87 B ILE 88 n 89 ILE 88 B VAL 89 n 90 VAL 89 B GLY 90 n 91 GLY 90 B PHE 91 n 92 PHE 91 B PHE 92 n 93 PHE 92 B ASP 93 n 94 ASP 93 B VAL 94 n 95 VAL 94 B GLY 95 n 96 GLY 95 B ARG 96 n 97 ARG 96 B TYR 97 n 98 TYR 97 B VAL 98 n 99 VAL 98 B CYS 99 n 100 CYS 99 B GLU 100 n 101 GLU 100 B GLU 101 n 102 GLU 101 B VAL 102 n 103 VAL 102 B LEU 103 n 104 LEU 103 B CYS 104 n 105 CYS 104 B PRO 105 n 106 PRO 105 B GLY 106 n 107 GLY 106 B SER 107 n 108 SER 107 B TRP 108 n 109 TRP 108 B THR 109 n 110 THR 109 B GLU 110 n 111 GLU 110 B ASP 111 n 112 ASP 111 B HIS 112 n 113 HIS 112 B GLU 113 n 114 GLU 113 B LEU 114 n 115 LEU 114 B LEU 115 n 116 LEU 115 B ASN 116 n 117 ASN 116 B ASP 117 n 118 ASP 117 B CYS 118 n 119 CYS 118 B MET 119 n 120 MET 119 B THR 120 n 121 THR 120 B HIS 121 n 122 HIS 121 B PHE 122 n 123 PHE 122 B PHE 123 n 124 PHE 123 B ILE 124 n 125 ILE 124 B GLU 125 n 126 GLU 125 B ASN 126 n 127 ASN 126 B ASN 127 n 128 ASN 127 B LEU 128 n 129 LEU 128 B MET 129 n 130 MET 129 B ASN 130 n 131 ASN 130 B HIS 131 n 132 HIS 131 B PHE 132 n 133 PHE 132 B PRO 133 n 134 PRO 133 B LEU 134 n 135 LEU 134 B GLU 135 n 136 GLU 135 B n 137 136 B n 138 137 B n 139 138 B n 140 139 B n 141 140 B n 142 141 B n 143 142 B n 1 105 C GLY 106 n 2 GLY 106 C GLY 107 n 3 GLY 107 C THR 108 n 4 THR 108 C MET 109 n 5 MET 109 C GLU 110 n 6 GLU 110 C ASN 111 n 7 ASN 111 C LEU 112 n 8 LEU 112 C SER 113 n 9 SER 113 C ARG 114 n 10 ARG 114 C ARG 115 n 11 ARG 115 C LEU 116 n 12 LEU 116 C LYS 117 n 13 LYS 117 C VAL 118 n 14 VAL 118 C THR 119 n 15 THR 119 C GLY 120 n 16 GLY 120 C ASP 121 n 17 ASP 121 C LEU 122 n 18 LEU 122 C PHE 123 n 19 PHE 123 C ASP 124 n 20 ASP 124 C ILE 125 n 21 ILE 125 C MET 126 n 22 MET 126 C SER 127 n 23 SER 127 C GLY 128 n 24 GLY 128 C GLN 129 n 25 GLN 129 C n 26 130 C ASP 105 n 1 ASP 105 D GLY 106 n 2 GLY 106 D GLY 107 n 3 GLY 107 D THR 108 n 4 THR 108 D MET 109 n 5 MET 109 D GLU 110 n 6 GLU 110 D ASN 111 n 7 ASN 111 D LEU 112 n 8 LEU 112 D SER 113 n 9 SER 113 D ARG 114 n 10 ARG 114 D ARG 115 n 11 ARG 115 D LEU 116 n 12 LEU 116 D LYS 117 n 13 LYS 117 D VAL 118 n 14 VAL 118 D THR 119 n 15 THR 119 D GLY 120 n 16 GLY 120 D ASP 121 n 17 ASP 121 D LEU 122 n 18 LEU 122 D PHE 123 n 19 PHE 123 D ASP 124 n 20 ASP 124 D ILE 125 n 21 ILE 125 D MET 126 n 22 MET 126 D SER 127 n 23 SER 127 D GLY 128 n 24 GLY 128 D n 25 129 D n 26 130 D author_and_software_defined_assembly PISA 2 dimeric author_and_software_defined_assembly PISA 2 dimeric 1910 -17 7940 1970 -15 7840 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A MET 0 A MET 1 1 Y 1 A ALA 1 A ALA 2 1 Y 1 A SER 2 A SER 3 1 Y 1 A HIS 3 A HIS 4 1 Y 1 A LYS 4 A LYS 5 1 Y 1 A GLU 135 A GLU 136 1 Y 1 A ASP 136 A ASP 137 1 Y 1 A HIS 137 A HIS 138 1 Y 1 A HIS 138 A HIS 139 1 Y 1 A HIS 139 A HIS 140 1 Y 1 A HIS 140 A HIS 141 1 Y 1 A HIS 141 A HIS 142 1 Y 1 A HIS 142 A HIS 143 1 Y 1 B MET 0 B MET 1 1 Y 1 B ALA 1 B ALA 2 1 Y 1 B SER 2 B SER 3 1 Y 1 B HIS 3 B HIS 4 1 Y 1 B LYS 4 B LYS 5 1 Y 1 B ASP 136 B ASP 137 1 Y 1 B HIS 137 B HIS 138 1 Y 1 B HIS 138 B HIS 139 1 Y 1 B HIS 139 B HIS 140 1 Y 1 B HIS 140 B HIS 141 1 Y 1 B HIS 141 B HIS 142 1 Y 1 B HIS 142 B HIS 143 1 Y 1 C ASP 105 C ASP 1 1 Y 1 C THR 130 C THR 26 1 Y 1 D GLN 129 D GLN 25 1 Y 1 D THR 130 D THR 26 1 Y 1 A A O O VAL HOH 82 160 2.09 1 -25.94 2.70 111.00 85.06 A A A N CA C GLU GLU GLU 26 26 26 N 1 -18.01 2.70 111.00 92.99 B B B N CA C CYS CYS CYS 29 29 29 N 1 -16.91 2.70 111.00 94.09 B B B N CA C VAL VAL VAL 30 30 30 N 1 -26.27 2.70 111.00 84.73 B B B N CA C SER SER SER 32 32 32 N 1 14.09 2.30 115.30 129.39 B B B CA CB CG LEU LEU LEU 134 134 134 N 1 -19.65 2.70 111.00 91.35 B B B N CA C LEU LEU LEU 134 134 134 N 1 A LEU 27 -65.95 -143.17 1 A ASP 28 -148.20 -139.69 1 A CYS 29 164.85 70.92 1 A ASN 66 -107.24 50.39 1 A HIS 131 -114.51 52.85 1 A PRO 133 -41.33 -17.06 1 B ASP 28 -147.66 26.96 1 B ARG 57 41.81 24.84 1 B ASN 66 -103.96 42.97 1 B PHE 132 -98.96 34.63 1 B LEU 134 -67.04 -82.79 1 C ASP 124 -38.68 -22.13 1 C SER 127 -154.12 -24.40 1 D ILE 125 -77.92 -100.20 1 D SER 127 178.96 -61.76 protein_rep.param protein.top water_rep.param water.top 66.5 17.35 0.00 -24.67 -4.67 0.00 -12.69 BULK SOLVENT MODEL USED 0.261 0.011 0.226 0.226 2.50 19.70 551 9936 5.5 95.5 RANDOM 1493683.82 0.000000 1 RESTRAINED THROUGHOUT 0.0 0.0 MOLECULAR REPLACEMENT PDB ENTRY 2ABO with residues 52-73 removed. FLAT MODEL 47.2445 0.35 0.41 0.33 5.00 0.46 0.43 2.50 19.70 94 2578 0 0 2484 0.009 1.8 20.4 0.88 2.36 2.50 4.02 3.00 3.61 3.00 5.49 4.50 1 CONSTR 1 X-RAY DIFFRACTION 0.35 0.036 0.33 2.66 96 1335 1911 6 6.7 82.5 33.3 2.3 50.0 3DVU 22424 1 0.156 0.156 1 6.8 2.7 0.420 2.3 2.38 1.6 1394 0.420 1.4 refinement CNS 1.2 data reduction HKL-2000 data scaling HKL-2000 phasing EPMR N Crystal structure of the complex of murine gamma-herpesvirus 68 Bcl-2 homolog M11 and the Beclin 1 BH3 domain 1 N N 1 N N 2 N N 2 N N 3 N N 3 N N 3 N N 3 N N A SER 6 A SER 7 HELX_P A SER 22 A SER 23 1 1 17 A ASP 31 A ASP 32 HELX_P A TYR 56 A TYR 57 1 2 26 A TYR 60 A TYR 61 HELX_P A LYS 65 A LYS 66 5 3 6 A ASN 66 A ASN 67 HELX_P A PHE 79 A PHE 80 1 4 14 A ASN 84 A ASN 85 HELX_P A GLU 101 A GLU 102 1 5 18 A THR 109 A THR 110 HELX_P A ASN 126 A ASN 127 1 6 18 A ASN 127 A ASN 128 HELX_P A HIS 131 A HIS 132 5 7 5 B SER 6 B SER 7 HELX_P B SER 22 B SER 23 1 8 17 B VAL 34 B VAL 35 HELX_P B ARG 57 B ARG 58 1 9 24 B TYR 60 B TYR 61 HELX_P B LYS 65 B LYS 66 5 10 6 B ASN 66 B ASN 67 HELX_P B PHE 79 B PHE 80 1 11 14 B ASN 84 B ASN 85 HELX_P B VAL 102 B VAL 103 1 12 19 B THR 109 B THR 110 HELX_P B ASN 126 B ASN 127 1 13 18 C GLY 106 C GLY 2 HELX_P C ASP 124 C ASP 20 1 14 19 D GLY 107 D GLY 3 HELX_P D ILE 125 D ILE 21 1 15 19 Viral Protein/apoptosis AUTOPHAGY, PROTEIN-PROTEIN COMPLEX, VIRAL BCL-2, BECLIN 1, APOPTOSIS, M11, ANTIVIRAL DEFENSE, BH3 DOMAIN, Coiled coil, Cytoplasm, Golgi apparatus, Membrane, Polymorphism, Viral Protein-apoptosis COMPLEX P89884_MHV68 UNP 1 2 P89884 SHKKSGTYWATLITAFLKTVSKVEELDCVDSAVLVDVSKIITLTQEFRRHYDSVYRADYGPALKNWKRDLSKLFTSLFVD VINSGRIVGFFDVGRYVCEEVLCPGSWTEDHELLNDCMTHFFIENNLMNHFPLED BECN1_HUMAN UNP 2 105 Q14457 DGGTMENLSRRLKVTGDLFDIMSGQT 2 136 3DVU 2 136 P89884 A 1 3 137 2 136 3DVU 2 136 P89884 B 1 3 137 105 130 3DVU 105 130 Q14457 C 2 1 26 105 130 3DVU 105 130 Q14457 D 2 1 26 1 initiating methionine MET 0 3DVU A P89884 UNP 1 1 insertion ALA 1 3DVU A P89884 UNP 2 1 expression tag HIS 137 3DVU A P89884 UNP 138 1 expression tag HIS 138 3DVU A P89884 UNP 139 1 expression tag HIS 139 3DVU A P89884 UNP 140 1 expression tag HIS 140 3DVU A P89884 UNP 141 1 expression tag HIS 141 3DVU A P89884 UNP 142 1 expression tag HIS 142 3DVU A P89884 UNP 143 2 initiating methionine MET 0 3DVU B P89884 UNP 1 2 insertion ALA 1 3DVU B P89884 UNP 2 2 expression tag HIS 137 3DVU B P89884 UNP 138 2 expression tag HIS 138 3DVU B P89884 UNP 139 2 expression tag HIS 139 3DVU B P89884 UNP 140 2 expression tag HIS 140 3DVU B P89884 UNP 141 2 expression tag HIS 141 3DVU B P89884 UNP 142 2 expression tag HIS 142 3DVU B P89884 UNP 143 4 P 1 21 1