0.012194 0.007040 0.000000 0.000000 0.014081 0.000000 0.000000 0.000000 0.030896 0.000000 0.000000 0.000000 Bonanno, J.B. Rutter, M. Bain, K.T. Hu, S. Romero, R. Smith, D. Wasserman, S. 0000-0002-0254-4955 Sauder, J.M. 0000-0002-2487-9713 Burley, S.K. Almo, S.C. New York SGX Research Center for Structural Genomics (NYSGXRC) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.000 90.000 120.000 82.006 82.006 32.367 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking UNKNOWN LIGAND non-polymer C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 147 N N N 148 S C N 149 N C N 150 N O N 151 S C N 152 N C N 153 N C N 154 N C N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N N N 170 S C N 171 N C N 172 N O N 173 N C N 174 N C N 175 N C N 176 N C N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N N N 192 S C N 193 N C N 194 N O N 195 N C N 196 N C N 197 N C N 198 N C N 199 N N N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N N N 217 S C N 218 N C N 219 N O N 220 N C N 221 N C N 222 N S N 223 N C N 224 N O N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N N N 237 S C N 238 N C N 239 N O N 240 N C Y 241 N C Y 242 N C Y 243 N C Y 244 N C Y 245 N C Y 246 N C N 247 N O N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N N N 260 S C N 261 N C N 262 N O N 263 N C N 264 N C N 265 N C N 266 N O N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N N N 277 S C N 278 N C N 279 N O N 280 N C N 281 N O N 282 N O N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 R C N 295 N O N 296 N C N 297 N O N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N N N 308 S C N 309 N C N 310 N O N 311 N C Y 312 N C Y 313 N C Y 314 N C Y 315 N N Y 316 N C Y 317 N C Y 318 N C Y 319 N C Y 320 N C N 321 N O N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N N N 335 S C N 336 N C N 337 N O N 338 N C Y 339 N C Y 340 N C Y 341 N C Y 342 N C Y 343 N C Y 344 N C N 345 N O N 346 N O N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N N N 359 S C N 360 N C N 361 N O N 362 N C N 363 N C N 364 N C N 365 N O N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing Y 235 N doub Y 236 N sing Y 237 N sing N 238 N sing Y 239 N doub N 240 N sing Y 241 N doub N 242 N sing Y 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N doub N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N doub N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N doub N 300 N sing N 301 N sing N 302 N sing N 303 N sing Y 304 N doub Y 305 N sing Y 306 N sing N 307 N sing Y 308 N doub Y 309 N sing Y 310 N sing N 311 N sing Y 312 N sing Y 313 N doub N 314 N sing Y 315 N doub N 316 N sing Y 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N doub N 328 N sing N 329 N sing N 330 N sing N 331 N sing Y 332 N doub Y 333 N sing Y 334 N sing N 335 N sing Y 336 N doub N 337 N sing Y 338 N doub N 339 N sing Y 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N doub N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing To be Published 0353 Crystal structure of a possible transglutaminase-family protein proteolytic fragment from Bacteroides fragilis 0000-0002-2487-9713 10.2210/pdb3e8v/pdb pdb_00003e8v 100 1 CCD 2008-07-18 MAR CCD 165 mm diamond SINGLE WAVELENGTH M x-ray 1 0.97958 1.0 31-ID APS 0.97958 SYNCHROTRON APS BEAMLINE 31-ID 8917.956 Possible transglutaminase-family protein residues 289-370 1 man polymer UNKNOWN LIGAND 1 syn non-polymer 18.015 water 5 nat water no no AKGSVLVTDAEGQPVADATVEFKVYNYAEFYTVATKHTDRSGHASLTAGKGDMLVWASKDGRFGYSKLSFGKDNELKITL DK AKGSVLVTDAEGQPVADATVEFKVYNYAEFYTVATKHTDRSGHASLTAGKGDMLVWASKDGRFGYSKLSFGKDNELKITL DK A NYSGXRC-12019a polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n ATCC 25285 sample BF1045 272559 Bacteroides fragilis NCTC 9343 562 Escherichia coli BL21(DE3) plasmid modified pET26 1 3.52 65.09 VAPOR DIFFUSION 6.5 100mM sodium cacodylate pH 6.5, 1.4M sodium acetate hydrate, Vapor diffusion, temperature 294K 294 New York SGX Research Center for Structural Genomics NYSGXRC PSI, Protein Structure Initiative software audit_author audit_author citation_author struct_site chem_comp_atom chem_comp_bond database_2 repository Initial release Version format compliance Refinement description Data collection Structure summary Database references Derived calculations Structure summary Data collection Database references 1 0 2008-09-02 1 1 2011-07-13 1 2 2017-10-25 1 3 2018-11-14 1 4 2021-02-10 1 5 2024-02-21 _audit_author.identifier_ORCID _audit_author.identifier_ORCID _citation_author.identifier_ORCID _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _database_2.pdbx_DOI _database_2.pdbx_database_accession Y RCSB Y RCSB 2008-08-20 REL REL UNL UNKNOWN LIGAND HOH water AUTHORS STATE THAT THE CRYSTAL IS FORMED FROM A FRAGMENT OF A PROTEIN OF 847 AMINO ACIDS, AND IT IS UNKNOWN WHAT THE ACTUAL TERMINI ARE FOR THE CRYSTALLIZED FRAGMENT. THE WHOLE SEQUENCE OF 847 RESIDUES IS SLGELFAVFNEKLTIPEQEALMFLYAYMPTGDVTDYTGDYYLENVRLSDQARREMPWGKE IPDDVFRHFVLPIRVNNENLDDSRRVFYNELKDRVKNLSLHDAVLEVNHWCHEKVIYTPS DARTSAPLASVKTAYGRCGEESTFTVAALRSVGIPARQVYTPRWAHTDDNHAWVEAWVDG KWYFFGACEPEPVLNLGWFNAPASRGMLMHTKVFGRYTGQEEIMYETPNYTEINVIDNYA PTAKGSVLVTDAEGQPVADATVEFKVYNYAEFYTVATKHTDRSGHASLTAGKGDMLVWAS KDGRFGYSKLSFGKDNELKITLDKNASETYSLPLDIVPPAEGANLPEVTPEQRTENDRRM AQEDSIRNAYVATFITEEQARTFAKENKLDETETVRLLIASRGNHQTLTDFLSDAVKADK AGQAISLLKVVSAKDLRDVSPEVLNDHLNNSGLPASEDFCSNVLNPRVANEMITPYKAFF RKEIPASEAEAFRKNPQALVEWCKKEITINNELNSQRIPMSPMGVWKARVADEKSRNIFF VSMARSLGIPAWIDEVTGKIQYRTFNDNNLKNGKVYDVDFEAAQQTQAPTGTLVARYRPI PSLSDPKYYSHFTLSKFRNGTFQLLNYDEGDVDMGGGATWSNLLKNGARLDTGYYMMVTG TRMASGAVLANVTFFTIEEGKTTTVDLVMRESKDQVQVIGNFNSESTYLPIGTSEPQSIL QTCGRGYYVVAVLGAGQEPTNHALRDIAALSGEFEKWGRKMVLLFPSEEQYKKFRPSEFP GLPSTITYGIDVDGAIQKQIAESMKLPNSTILPMFIIGDTFNRVVFVSQGYTIGLGEQLM KVIHGEG UNL 1 2 UNL UNL 1 A HOH 5 3 HOH HOH 5 A HOH 6 3 HOH HOH 6 A HOH 7 3 HOH HOH 7 A HOH 11 3 HOH HOH 11 A HOH 12 3 HOH HOH 12 A ALA 289 n 1 ALA 289 A LYS 290 n 2 LYS 290 A GLY 291 n 3 GLY 291 A SER 292 n 4 SER 292 A VAL 293 n 5 VAL 293 A LEU 294 n 6 LEU 294 A VAL 295 n 7 VAL 295 A THR 296 n 8 THR 296 A ASP 297 n 9 ASP 297 A ALA 298 n 10 ALA 298 A GLU 299 n 11 GLU 299 A GLY 300 n 12 GLY 300 A GLN 301 n 13 GLN 301 A PRO 302 n 14 PRO 302 A VAL 303 n 15 VAL 303 A ALA 304 n 16 ALA 304 A ASP 305 n 17 ASP 305 A ALA 306 n 18 ALA 306 A THR 307 n 19 THR 307 A VAL 308 n 20 VAL 308 A GLU 309 n 21 GLU 309 A PHE 310 n 22 PHE 310 A LYS 311 n 23 LYS 311 A VAL 312 n 24 VAL 312 A TYR 313 n 25 TYR 313 A ASN 314 n 26 ASN 314 A TYR 315 n 27 TYR 315 A ALA 316 n 28 ALA 316 A GLU 317 n 29 GLU 317 A PHE 318 n 30 PHE 318 A TYR 319 n 31 TYR 319 A THR 320 n 32 THR 320 A VAL 321 n 33 VAL 321 A ALA 322 n 34 ALA 322 A THR 323 n 35 THR 323 A LYS 324 n 36 LYS 324 A HIS 325 n 37 HIS 325 A THR 326 n 38 THR 326 A ASP 327 n 39 ASP 327 A ARG 328 n 40 ARG 328 A SER 329 n 41 SER 329 A GLY 330 n 42 GLY 330 A HIS 331 n 43 HIS 331 A ALA 332 n 44 ALA 332 A SER 333 n 45 SER 333 A LEU 334 n 46 LEU 334 A THR 335 n 47 THR 335 A ALA 336 n 48 ALA 336 A GLY 337 n 49 GLY 337 A LYS 338 n 50 LYS 338 A GLY 339 n 51 GLY 339 A ASP 340 n 52 ASP 340 A MET 341 n 53 MET 341 A LEU 342 n 54 LEU 342 A VAL 343 n 55 VAL 343 A TRP 344 n 56 TRP 344 A ALA 345 n 57 ALA 345 A SER 346 n 58 SER 346 A LYS 347 n 59 LYS 347 A ASP 348 n 60 ASP 348 A GLY 349 n 61 GLY 349 A ARG 350 n 62 ARG 350 A PHE 351 n 63 PHE 351 A GLY 352 n 64 GLY 352 A TYR 353 n 65 TYR 353 A SER 354 n 66 SER 354 A LYS 355 n 67 LYS 355 A LEU 356 n 68 LEU 356 A SER 357 n 69 SER 357 A PHE 358 n 70 PHE 358 A GLY 359 n 71 GLY 359 A LYS 360 n 72 LYS 360 A ASP 361 n 73 ASP 361 A ASN 362 n 74 ASN 362 A GLU 363 n 75 GLU 363 A LEU 364 n 76 LEU 364 A LYS 365 n 77 LYS 365 A ILE 366 n 78 ILE 366 A THR 367 n 79 THR 367 A LEU 368 n 80 LEU 368 A ASP 369 n 81 ASP 369 A LYS 370 n 82 LYS 370 A software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O ALA 332 A O ALA 44 A N VAL 293 A N VAL 5 A N LEU 294 A N LEU 6 A O ILE 366 A O ILE 78 A O LYS 324 A O LYS 36 A N VAL 308 A N VAL 20 A N THR 307 A N THR 19 A O SER 346 A O SER 58 A N GLY 339 A N GLY 51 A O PHE 358 A O PHE 70 1 A UNL 1 B UNL 1 A CG GLU 299 A CG GLU 11 1 Y 1 A CD GLU 299 A CD GLU 11 1 Y 1 A OE1 GLU 299 A OE1 GLU 11 1 Y 1 A OE2 GLU 299 A OE2 GLU 11 1 Y 1 A CG ARG 328 A CG ARG 40 1 Y 1 A CD ARG 328 A CD ARG 40 1 Y 1 A NE ARG 328 A NE ARG 40 1 Y 1 A CZ ARG 328 A CZ ARG 40 1 Y 1 A NH1 ARG 328 A NH1 ARG 40 1 Y 1 A NH2 ARG 328 A NH2 ARG 40 1 Y 1 A OG SER 333 A OG SER 45 1 Y 1 A CG LYS 338 A CG LYS 50 1 Y 1 A CD LYS 338 A CD LYS 50 1 Y 1 A CE LYS 338 A CE LYS 50 1 Y 1 A NZ LYS 338 A NZ LYS 50 1 Y 1 A CG ARG 350 A CG ARG 62 1 Y 1 A CD ARG 350 A CD ARG 62 1 Y 1 A NE ARG 350 A NE ARG 62 1 Y 1 A CZ ARG 350 A CZ ARG 62 1 Y 1 A NH1 ARG 350 A NH1 ARG 62 1 Y 1 A NH2 ARG 350 A NH2 ARG 62 1 Y 1 A CG LYS 365 A CG LYS 77 1 Y 1 A CD LYS 365 A CD LYS 77 1 Y 1 A CE LYS 365 A CE LYS 77 1 Y 1 A NZ LYS 365 A NZ LYS 77 1 Y 1 A CG ASP 369 A CG ASP 81 1 Y 1 A OD1 ASP 369 A OD1 ASP 81 1 Y 1 A OD2 ASP 369 A OD2 ASP 81 1 Y 1 14.39 2.30 115.30 129.69 A A A CA CB CG LEU LEU LEU 356 356 356 N 1 A LEU 368 -63.81 71.99 57.06 36.837 18.71 -1.070 -0.540 0.000 -1.070 0.000 1.610 0.932 0.924 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS; UNKNOWN ION MODELED AS BA; PROTEOLYTIC FRAGMENT IDENTIFIED BY SEQUENCE REGISTER 0.243 0.225 0.226 2.400 15.000 224 5054 5050 4.400 99.920 0.239 0.220 1.00 0.50 0.820 6.792 0.155 0.276 0.210 RANDOM 1 THROUGHOUT 0.00 0 SAD 0.276 0.210 0.800 0.800 1.400 MAXIMUM LIKELIHOOD MASK 2.400 15.000 5 606 1 0 600 0.014 0.022 612 1.527 1.939 830 6.364 5.000 81 37.687 25.217 23 17.773 15.000 91 0.090 0.200 95 0.005 0.020 458 0.241 0.200 217 0.307 0.200 410 0.137 0.200 27 0.325 0.200 3 0.436 0.200 21 0.088 0.200 1 0.320 0.200 3 0.924 1.500 402 1.708 2.000 631 2.016 3.000 215 3.122 4.500 199 0.389 0.349 2.461 11 353 364 353 20 100.000 51.6 2.400 19.699 3E8V 5084 5079 0 0 0.100 0.100 1 30.1 22.000 99.900 0.574 2.40 2.53 5.8 16470 737 0.574 22.30 99.80 data scaling Phil R. Evans pre@mrc-lmb.cam.ac.uk 22/12/2005 Fortran_77 http://www.ccp4.ac.uk/dist/html/scala.html SCALA other 3.2.19 refinement Garib N. Murshudov garib@ysbl.york.ac.uk Fortran_77 http://www.ccp4.ac.uk/dist/html/refmac5.html REFMAC program data extraction PDB help@deposit.rcsb.org June 11, 2008 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.006 data collection MAR345 CCD data reduction MOSFLM phasing SHELXCD model building SHELXE Crystal structure of a possible transglutaminase-family protein proteolytic fragment from Bacteroides fragilis 1 N N 2 N N 3 N N authors state that the biological unit is probable dimer mediated by unknown ion. structural genomics, unknown function STRUCTURAL GENOMICS, UNKNOWN FUNCTION, PSI-2, Protein Structure Initiative, New York SGX Research Center for Structural Genomics, NYSGXRC Q5LGG0_BACFN UNP 1 289 Q5LGG0 AKGSVLVTDAEGQPVADATVEFKVYNYAEFYTVATKHTDRSGHASLTAGKGDMLVWASKDGRFGYSKLSFGKDNELKITL DK 289 370 3E8V 289 370 Q5LGG0 A 1 1 82 3 4 anti-parallel parallel anti-parallel anti-parallel anti-parallel A HIS 331 A HIS 43 A THR 335 A THR 47 A LYS 290 A LYS 2 A THR 296 A THR 8 A GLU 363 A GLU 75 A THR 367 A THR 79 A GLU 317 A GLU 29 A HIS 325 A HIS 37 A THR 307 A THR 19 A ASN 314 A ASN 26 A GLY 339 A GLY 51 A LYS 347 A LYS 59 A ARG 350 A ARG 62 A PHE 358 A PHE 70 BINDING SITE FOR RESIDUE UNL A 1 A UNL 1 Software 2 A HIS 331 A HIS 43 2 1_555 A GLU 363 A GLU 75 2 1_555 152 P 31 2 1