1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Frank, J. Li, W. Agirrezabala, X. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C10 H14 N5 O7 P 347.221 y ADENOSINE-5'-MONOPHOSPHATE RNA linking C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C9 H14 N3 O8 P 323.197 y CYTIDINE-5'-MONOPHOSPHATE RNA linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O8 P 363.221 y GUANOSINE-5'-MONOPHOSPHATE RNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C9 H13 N2 O9 P 324.181 y URIDINE-5'-MONOPHOSPHATE RNA linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N O N 2 N P N 3 N O N 4 N O N 5 N O N 6 N C N 7 R C N 8 N O N 9 S C N 10 N O N 11 R C N 12 N O N 13 R C Y 14 N N Y 15 N C Y 16 N N Y 17 N C Y 18 N C N 19 N N Y 20 N N Y 21 N C Y 22 N N Y 23 N C N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N N N 39 S C N 40 N C N 41 N O N 42 N C N 43 N O N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N N N 52 S C N 53 N C N 54 N O N 55 N C N 56 N C N 57 N C N 58 N N N 59 N C N 60 N N N 61 N N N 62 N O N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N N N 79 S C N 80 N C N 81 N O N 82 N C N 83 N C N 84 N O N 85 N N N 86 N O N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N N N 96 S C N 97 N C N 98 N O N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N O N 112 N P N 113 N O N 114 N O N 115 N O N 116 N C N 117 R C N 118 N O N 119 S C N 120 N O N 121 R C N 122 N O N 123 R C N 124 N N N 125 N C N 126 N O N 127 N N N 128 N C N 129 N N N 130 N C N 131 N C N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N N N 147 R C N 148 N C N 149 N O N 150 N C N 151 N S N 152 N O N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N O N 161 N P N 162 N O N 163 N O N 164 N O N 165 N C N 166 R C N 167 N O N 168 S C N 169 N O N 170 R C N 171 N O N 172 R C Y 173 N N Y 174 N C Y 175 N N Y 176 N C N 177 N C N 178 N O N 179 N N N 180 N C N 181 N N N 182 N N Y 183 N C N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N N N 199 S C N 200 N C N 201 N O N 202 N C N 203 N C N 204 N C N 205 N O N 206 N N N 207 N O N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N N N 219 S C N 220 N C N 221 N O N 222 N C N 223 N C N 224 N C N 225 N O N 226 N O N 227 N O N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N N N 238 N C N 239 N C N 240 N O N 241 N O N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N N N 248 S C N 249 N C N 250 N O N 251 N C Y 252 N C Y 253 N N Y 254 N C Y 255 N C Y 256 N N N 257 N O N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N N N 269 S C N 270 N C N 271 N O N 272 S C N 273 N C N 274 N C N 275 N C N 276 N O N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N C N 296 N C N 297 N C N 298 N O N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N N N 313 S C N 314 N C N 315 N O N 316 N C N 317 N C N 318 N C N 319 N C N 320 N N N 321 N O N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N N N 338 S C N 339 N C N 340 N O N 341 N C N 342 N C N 343 N S N 344 N C N 345 N O N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N N N 358 S C N 359 N C N 360 N O N 361 N C Y 362 N C Y 363 N C Y 364 N C Y 365 N C Y 366 N C Y 367 N C N 368 N O N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N N N 381 S C N 382 N C N 383 N O N 384 N C N 385 N C N 386 N C N 387 N O N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N N N 398 S C N 399 N C N 400 N O N 401 N C N 402 N O N 403 N O N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N N N 412 S C N 413 N C N 414 N O N 415 R C N 416 N O N 417 N C N 418 N O N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N N N 429 S C N 430 N C N 431 N O N 432 N C Y 433 N C Y 434 N C Y 435 N C Y 436 N N Y 437 N C Y 438 N C Y 439 N C Y 440 N C Y 441 N C N 442 N O N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N N N 456 S C N 457 N C N 458 N O N 459 N C Y 460 N C Y 461 N C Y 462 N C Y 463 N C Y 464 N C Y 465 N C N 466 N O N 467 N O N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N H N 477 N H N 478 N H N 479 N O N 480 N P N 481 N O N 482 N O N 483 N O N 484 N C N 485 R C N 486 N O N 487 S C N 488 N O N 489 R C N 490 N O N 491 R C N 492 N N N 493 N C N 494 N O N 495 N N N 496 N C N 497 N O N 498 N C N 499 N C N 500 N H N 501 N H N 502 N H N 503 N H N 504 N H N 505 N H N 506 N H N 507 N H N 508 N H N 509 N H N 510 N H N 511 N H N 512 N H N 513 N N N 514 S C N 515 N C N 516 N O N 517 N C N 518 N C N 519 N C N 520 N O N 521 N H N 522 N H N 523 N H N 524 N H N 525 N H N 526 N H N 527 N H N 528 N H N 529 N H N 530 N H N 531 N H N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing Y 25 N sing Y 26 N sing Y 27 N doub N 28 N sing Y 29 N sing Y 30 N sing Y 31 N doub N 32 N sing Y 33 N doub N 34 N sing N 35 N sing Y 36 N sing Y 37 N doub N 38 N sing Y 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N doub N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N doub N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N doub N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N doub N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N doub N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N doub N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N doub N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N doub N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N doub N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N doub N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing Y 182 N sing Y 183 N sing Y 184 N doub N 185 N sing Y 186 N sing N 187 N sing Y 188 N doub N 189 N doub N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N doub N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N doub N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N doub N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N doub N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N doub N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N doub N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N doub N 251 N sing N 252 N sing N 253 N sing N 254 N sing Y 255 N sing Y 256 N doub Y 257 N doub N 258 N sing Y 259 N sing N 260 N sing Y 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N doub N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N doub N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N doub N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N doub N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N doub N 357 N sing N 358 N sing N 359 N sing N 360 N sing Y 361 N doub Y 362 N sing Y 363 N sing N 364 N sing Y 365 N doub N 366 N sing Y 367 N doub N 368 N sing Y 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N doub N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N doub N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N doub N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N doub N 426 N sing N 427 N sing N 428 N sing N 429 N sing Y 430 N doub Y 431 N sing Y 432 N sing N 433 N sing Y 434 N doub Y 435 N sing Y 436 N sing N 437 N sing Y 438 N sing Y 439 N doub N 440 N sing Y 441 N doub N 442 N sing Y 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N doub N 454 N sing N 455 N sing N 456 N sing N 457 N sing Y 458 N doub Y 459 N sing Y 460 N sing N 461 N sing Y 462 N doub N 463 N sing Y 464 N doub N 465 N sing Y 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N doub N 474 N sing N 475 N sing N 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing N 497 N doub N 498 N sing N 499 N sing N 500 N sing N 501 N doub N 502 N sing N 503 N doub N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N sing N 512 N doub N 513 N sing N 514 N sing N 515 N sing N 516 N sing N 517 N sing N 518 N sing N 519 N sing N 520 N sing N 521 N sing N 522 N sing N 523 N sing UK Embo J. EMJODG 0897 0261-4189 27 3322 3331 10.1038/emboj.2008.243 19020518 Recognition of aminoacyl-tRNA: a common molecular mechanism revealed by cryo-EM. 2008 10.2210/pdb3eq4/pdb pdb_00003eq4 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 METHOD--See Method in the citation REFINEMENT PROTOCOL--auto OTHER REAL cross-correlation coefficient 2AVY 1 2AVY PDB experimental model 2AW4 2 2AW4 PDB experimental model 1QZA 3 1QZA PDB experimental model 1OB2 4 1OB2 PDB experimental model 3EQ4 SINGLE PARTICLE 80000 12 POINT Polymix buffer( 5 mM potassium phosphate (KH2PO4) pH 7.3, 5 mM NH4Cl, 95 mM KCl, 0.5 mM CaCl2, 8 mM putrescine, 1 mM spermidine, 1 mM DTE, 5 mM magnesium acetate) 7.3 A/T-tRNA(Leu), EF-Tu, L11, S12, fragments h44 and h18 from the 16S rRNA, fragments H43-H44, H69, and H95 from the 23S rRNA ribosome in pre-accommodated state 0 RIBOSOME PARTICLE 1 1 SINGLE PARTICLE 15 GENERIC CCD 300 2005-07-15 FIELD EMISSION GUN FLOOD BEAM FEI TECNAI F20 BRIGHT FIELD 4000 1000 50000 1 3EQ4 C1 MODEL FITTING TNT RSRef RECONSTRUCTION 1 SPIDER NO NO NO YES NITROGEN 3EQ4 FEI VITROBOT MARK I 43239.297 Elongation factor Tu 1 nat polymer 13636.961 30S ribosomal protein S12 1 nat polymer 14763.165 50S ribosomal protein L11 1 nat polymer 27348.209 tRNA 1 nat polymer 2871.766 Fragment h18 of the 16S rRNA 1 nat polymer 3601.218 Fragment h44 of the 16S rRNA 1 nat polymer 15504.268 Fragment H43-44 of the 23S rRNA 1 nat polymer 9089.461 Fragment H95 of the 23S rRNA 1 nat polymer 5427.285 Fragment H69 of the 23S rRNA 1 nat polymer EF-Tu, P-43 no no SKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVD CPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQY DFPGDDTPIVRGSALKALEGDAEWEAKILELAGFLDSYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGE EVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHT PFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVLS SKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVD CPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQY DFPGDDTPIVRGSALKALEGDAEWEAKILELAGFLDSYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGE EVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHT PFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVLS X polypeptide(L) no no ATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKKPNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVIL IRGGRVKDLPGVRYHTVRGALDCSGVKDRKQARSKYGVKRPKA ATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKKPNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVIL IRGGRVKDLPGVRYHTVRGALDCSGVKDRKQARSKYGVKRPKA L polypeptide(L) no no AKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNAKTDSIEKGLPIPVVITVYADRSFTFVTKTPPAAVLLK KAAGIKSGSGKPNKDKVGKISRAQLQEIAQTKAADMTGADIEAMTRSIEGTARSMGLVVED AKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNAKTDSIEKGLPIPVVITVYADRSFTFVTKTPPAAVLLK KAAGIKSGSGKPNKDKVGKISRAQLQEIAQTKAADMTGADIEAMTRSIEGTARSMGLVVED I polypeptide(L) no no CGGAUUUAGCUCAGUUGGGAGAGCGCCAGACUGAAGAUCUGGACCUGUGUUCGAUCCACAGAAUUCGCACCCUCCCGUAG GGGUU CGGAUUUAGCUCAGUUGGGAGAGCGCCAGACUGAAGAUCUGGACCUGUGUUCGAUCCACAGAAUUCGCACCCUCCCGUAG GGGUU Y polyribonucleotide no no CGCGGUAAU CGCGGUAAU A polyribonucleotide no no GGGCGAAGUCG GGGCGAAGUCG C polyribonucleotide no no AGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCU AGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCU B polyribonucleotide no no UGCUCCUAGUACGAGAGGACCGGAGUGG UGCUCCUAGUACGAGAGGACCGGAGUGG D polyribonucleotide no no GCCGUAACUAUAACGGU GCCGUAACUAUAACGGU E polyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 83333 Escherichia coli K12 sample 83333 Escherichia coli K12 sample 83333 Escherichia coli K12 sample 83333 Escherichia coli K12 sample 83333 Escherichia coli K12 sample 83333 Escherichia coli K12 sample 83333 Escherichia coli K12 sample 83333 Escherichia coli K12 sample 83333 Escherichia coli K12 em_image_scans em_software chem_comp_atom chem_comp_bond database_2 em_3d_fitting_list pdbx_database_related pdbx_initial_refinement_model repository Initial release Version format compliance Refinement description Data collection Data collection Database references Refinement description 1 0 2008-12-16 1 1 2011-07-13 1 2 2012-05-30 1 3 2018-07-18 1 4 2024-02-21 _em_software.image_processing_id _database_2.pdbx_DOI _database_2.pdbx_database_accession _em_3d_fitting_list.accession_code _em_3d_fitting_list.initial_refinement_model_id _em_3d_fitting_list.source_name _em_3d_fitting_list.type _pdbx_database_related.content_type CA ATOMS ONLY CA ATOMS ONLY CA ATOMS ONLY P ATOMS ONLY P ATOMS ONLY P ATOMS ONLY P ATOMS ONLY P ATOMS ONLY P ATOMS ONLY coordinates for initial input model for RSRef coordinates for initial input model for RSRef coordinates for initial input model for RSRef coordinates for initial input model for RSRef Model of Phe-tRNA(Phe) in the ribosomal pre-accommodated state revealed by cryo-EM Model of tRNA(Trp)-EF-Tu in the ribosomal pre-accommodated state revealed by cryo-EM RCSB Y RCSB 2008-09-30 REL 2AVY PDB experimental model 2AW4 PDB experimental model 1QZA PDB experimental model 1OB2 PDB experimental model ALA 1 n 1 SER 1 X LYS 2 n 2 LYS 2 X GLU 3 n 3 GLU 3 X LYS 4 n 4 LYS 4 X PHE 5 n 5 PHE 5 X GLU 6 n 6 GLU 6 X ARG 7 n 7 ARG 7 X THR 8 n 8 THR 8 X LYS 9 n 9 LYS 9 X PRO 10 n 10 PRO 10 X HIS 11 n 11 HIS 11 X VAL 12 n 12 VAL 12 X ASN 13 n 13 ASN 13 X VAL 14 n 14 VAL 14 X GLY 15 n 15 GLY 15 X THR 16 n 16 THR 16 X ILE 17 n 17 ILE 17 X GLY 18 n 18 GLY 18 X HIS 19 n 19 HIS 19 X VAL 20 n 20 VAL 20 X ASP 21 n 21 ASP 21 X HIS 22 n 22 HIS 22 X GLY 23 n 23 GLY 23 X LYS 24 n 24 LYS 24 X THR 25 n 25 THR 25 X THR 26 n 26 THR 26 X LEU 27 n 27 LEU 27 X THR 28 n 28 THR 28 X ALA 29 n 29 ALA 29 X ALA 30 n 30 ALA 30 X ILE 31 n 31 ILE 31 X THR 32 n 32 THR 32 X THR 33 n 33 THR 33 X VAL 34 n 34 VAL 34 X LEU 35 n 35 LEU 35 X ALA 36 n 36 ALA 36 X LYS 37 n 37 LYS 37 X THR 38 n 38 THR 38 X TYR 39 n 39 TYR 39 X GLY 40 n 40 GLY 40 X GLY 41 n 41 GLY 41 X ALA 42 n 42 ALA 42 X ALA 43 n 43 ALA 43 X ARG 44 n 44 ARG 44 X ALA 45 n 45 ALA 45 X PHE 46 n 46 PHE 46 X ASP 47 n 47 ASP 47 X GLN 48 n 48 GLN 48 X ILE 49 n 49 ILE 49 X ASP 50 n 50 ASP 50 X ASN 51 n 51 ASN 51 X ALA 52 n 52 ALA 52 X PRO 53 n 53 PRO 53 X GLU 54 n 54 GLU 54 X GLU 55 n 55 GLU 55 X LYS 56 n 56 LYS 56 X ALA 57 n 57 ALA 57 X ARG 58 n 58 ARG 58 X GLY 59 n 59 GLY 59 X ILE 60 n 60 ILE 60 X THR 61 n 61 THR 61 X ILE 62 n 62 ILE 62 X ASN 63 n 63 ASN 63 X THR 64 n 64 THR 64 X SER 65 n 65 SER 65 X HIS 66 n 66 HIS 66 X VAL 67 n 67 VAL 67 X GLU 68 n 68 GLU 68 X TYR 69 n 69 TYR 69 X ASP 70 n 70 ASP 70 X THR 71 n 71 THR 71 X PRO 72 n 72 PRO 72 X THR 73 n 73 THR 73 X ARG 74 n 74 ARG 74 X HIS 75 n 75 HIS 75 X TYR 76 n 76 TYR 76 X ALA 77 n 77 ALA 77 X HIS 78 n 78 HIS 78 X VAL 79 n 79 VAL 79 X ASP 80 n 80 ASP 80 X CYS 81 n 81 CYS 81 X PRO 82 n 82 PRO 82 X GLY 83 n 83 GLY 83 X HIS 84 n 84 HIS 84 X ALA 85 n 85 ALA 85 X ASP 86 n 86 ASP 86 X TYR 87 n 87 TYR 87 X VAL 88 n 88 VAL 88 X LYS 89 n 89 LYS 89 X ASN 90 n 90 ASN 90 X MET 91 n 91 MET 91 X ILE 92 n 92 ILE 92 X THR 93 n 93 THR 93 X GLY 94 n 94 GLY 94 X ALA 95 n 95 ALA 95 X ALA 96 n 96 ALA 96 X GLN 97 n 97 GLN 97 X MET 98 n 98 MET 98 X ASP 99 n 99 ASP 99 X GLY 100 n 100 GLY 100 X ALA 101 n 101 ALA 101 X ILE 102 n 102 ILE 102 X LEU 103 n 103 LEU 103 X VAL 104 n 104 VAL 104 X VAL 105 n 105 VAL 105 X ALA 106 n 106 ALA 106 X ALA 107 n 107 ALA 107 X THR 108 n 108 THR 108 X ASP 109 n 109 ASP 109 X GLY 110 n 110 GLY 110 X PRO 111 n 111 PRO 111 X MET 112 n 112 MET 112 X PRO 113 n 113 PRO 113 X GLN 114 n 114 GLN 114 X THR 115 n 115 THR 115 X ARG 116 n 116 ARG 116 X GLU 117 n 117 GLU 117 X HIS 118 n 118 HIS 118 X ILE 119 n 119 ILE 119 X LEU 120 n 120 LEU 120 X LEU 121 n 121 LEU 121 X GLY 122 n 122 GLY 122 X ARG 123 n 123 ARG 123 X GLN 124 n 124 GLN 124 X VAL 125 n 125 VAL 125 X GLY 126 n 126 GLY 126 X VAL 127 n 127 VAL 127 X PRO 128 n 128 PRO 128 X TYR 129 n 129 TYR 129 X ILE 130 n 130 ILE 130 X ILE 131 n 131 ILE 131 X VAL 132 n 132 VAL 132 X PHE 133 n 133 PHE 133 X LEU 134 n 134 LEU 134 X ASN 135 n 135 ASN 135 X LYS 136 n 136 LYS 136 X CYS 137 n 137 CYS 137 X ASP 138 n 138 ASP 138 X MET 139 n 139 MET 139 X VAL 140 n 140 VAL 140 X ASP 141 n 141 ASP 141 X ASP 142 n 142 ASP 142 X GLU 143 n 143 GLU 143 X GLU 144 n 144 GLU 144 X LEU 145 n 145 LEU 145 X LEU 146 n 146 LEU 146 X GLU 147 n 147 GLU 147 X LEU 148 n 148 LEU 148 X VAL 149 n 149 VAL 149 X GLU 150 n 150 GLU 150 X MET 151 n 151 MET 151 X GLU 152 n 152 GLU 152 X VAL 153 n 153 VAL 153 X ARG 154 n 154 ARG 154 X GLU 155 n 155 GLU 155 X LEU 156 n 156 LEU 156 X LEU 157 n 157 LEU 157 X SER 158 n 158 SER 158 X GLN 159 n 159 GLN 159 X TYR 160 n 160 TYR 160 X ASP 161 n 161 ASP 161 X PHE 162 n 162 PHE 162 X PRO 163 n 163 PRO 163 X GLY 164 n 164 GLY 164 X ASP 165 n 165 ASP 165 X ASP 166 n 166 ASP 166 X THR 167 n 167 THR 167 X PRO 168 n 168 PRO 168 X ILE 169 n 169 ILE 169 X VAL 170 n 170 VAL 170 X ARG 171 n 171 ARG 171 X GLY 172 n 172 GLY 172 X SER 173 n 173 SER 173 X ALA 174 n 174 ALA 174 X LEU 175 n 175 LEU 175 X LYS 176 n 176 LYS 176 X ALA 177 n 177 ALA 177 X LEU 178 n 178 LEU 178 X GLU 179 n 179 GLU 179 X GLY 180 n 180 GLY 180 X ASP 181 n 181 ASP 181 X ALA 182 n 182 ALA 182 X GLU 183 n 183 GLU 183 X TRP 184 n 184 TRP 184 X GLU 185 n 185 GLU 185 X ALA 186 n 186 ALA 186 X LYS 187 n 187 LYS 187 X ILE 188 n 188 ILE 188 X LEU 189 n 189 LEU 189 X GLU 190 n 190 GLU 190 X LEU 191 n 191 LEU 191 X ALA 192 n 192 ALA 192 X GLY 193 n 193 GLY 193 X PHE 194 n 194 PHE 194 X LEU 195 n 195 LEU 195 X ASP 196 n 196 ASP 196 X SER 197 n 197 SER 197 X TYR 198 n 198 TYR 198 X ILE 199 n 199 ILE 199 X PRO 200 n 200 PRO 200 X GLU 201 n 201 GLU 201 X PRO 202 n 202 PRO 202 X GLU 203 n 203 GLU 203 X ARG 204 n 204 ARG 204 X ALA 205 n 205 ALA 205 X ILE 206 n 206 ILE 206 X ASP 207 n 207 ASP 207 X LYS 208 n 208 LYS 208 X PRO 209 n 209 PRO 209 X PHE 210 n 210 PHE 210 X LEU 211 n 211 LEU 211 X LEU 212 n 212 LEU 212 X PRO 213 n 213 PRO 213 X ILE 214 n 214 ILE 214 X GLU 215 n 215 GLU 215 X ASP 216 n 216 ASP 216 X VAL 217 n 217 VAL 217 X PHE 218 n 218 PHE 218 X SER 219 n 219 SER 219 X ILE 220 n 220 ILE 220 X SER 221 n 221 SER 221 X GLY 222 n 222 GLY 222 X ARG 223 n 223 ARG 223 X GLY 224 n 224 GLY 224 X THR 225 n 225 THR 225 X VAL 226 n 226 VAL 226 X VAL 227 n 227 VAL 227 X THR 228 n 228 THR 228 X GLY 229 n 229 GLY 229 X ARG 230 n 230 ARG 230 X VAL 231 n 231 VAL 231 X GLU 232 n 232 GLU 232 X ARG 233 n 233 ARG 233 X GLY 234 n 234 GLY 234 X ILE 235 n 235 ILE 235 X ILE 236 n 236 ILE 236 X LYS 237 n 237 LYS 237 X VAL 238 n 238 VAL 238 X GLY 239 n 239 GLY 239 X GLU 240 n 240 GLU 240 X GLU 241 n 241 GLU 241 X VAL 242 n 242 VAL 242 X GLU 243 n 243 GLU 243 X ILE 244 n 244 ILE 244 X VAL 245 n 245 VAL 245 X GLY 246 n 246 GLY 246 X ILE 247 n 247 ILE 247 X LYS 248 n 248 LYS 248 X GLU 249 n 249 GLU 249 X THR 250 n 250 THR 250 X GLN 251 n 251 GLN 251 X LYS 252 n 252 LYS 252 X SER 253 n 253 SER 253 X THR 254 n 254 THR 254 X CYS 255 n 255 CYS 255 X THR 256 n 256 THR 256 X GLY 257 n 257 GLY 257 X VAL 258 n 258 VAL 258 X GLU 259 n 259 GLU 259 X MET 260 n 260 MET 260 X PHE 261 n 261 PHE 261 X ARG 262 n 262 ARG 262 X LYS 263 n 263 LYS 263 X LEU 264 n 264 LEU 264 X LEU 265 n 265 LEU 265 X ASP 266 n 266 ASP 266 X GLU 267 n 267 GLU 267 X GLY 268 n 268 GLY 268 X ARG 269 n 269 ARG 269 X ALA 270 n 270 ALA 270 X GLY 271 n 271 GLY 271 X GLU 272 n 272 GLU 272 X ASN 273 n 273 ASN 273 X VAL 274 n 274 VAL 274 X GLY 275 n 275 GLY 275 X VAL 276 n 276 VAL 276 X LEU 277 n 277 LEU 277 X LEU 278 n 278 LEU 278 X ARG 279 n 279 ARG 279 X GLY 280 n 280 GLY 280 X ILE 281 n 281 ILE 281 X LYS 282 n 282 LYS 282 X ARG 283 n 283 ARG 283 X GLU 284 n 284 GLU 284 X GLU 285 n 285 GLU 285 X ILE 286 n 286 ILE 286 X GLU 287 n 287 GLU 287 X ARG 288 n 288 ARG 288 X GLY 289 n 289 GLY 289 X GLN 290 n 290 GLN 290 X VAL 291 n 291 VAL 291 X LEU 292 n 292 LEU 292 X ALA 293 n 293 ALA 293 X LYS 294 n 294 LYS 294 X PRO 295 n 295 PRO 295 X GLY 296 n 296 GLY 296 X THR 297 n 297 THR 297 X ILE 298 n 298 ILE 298 X LYS 299 n 299 LYS 299 X PRO 300 n 300 PRO 300 X HIS 301 n 301 HIS 301 X THR 302 n 302 THR 302 X LYS 303 n 303 LYS 303 X PHE 304 n 304 PHE 304 X GLU 305 n 305 GLU 305 X SER 306 n 306 SER 306 X GLU 307 n 307 GLU 307 X VAL 308 n 308 VAL 308 X TYR 309 n 309 TYR 309 X ILE 310 n 310 ILE 310 X LEU 311 n 311 LEU 311 X SER 312 n 312 SER 312 X LYS 313 n 313 LYS 313 X ASP 314 n 314 ASP 314 X GLU 315 n 315 GLU 315 X GLY 316 n 316 GLY 316 X GLY 317 n 317 GLY 317 X ARG 318 n 318 ARG 318 X HIS 319 n 319 HIS 319 X THR 320 n 320 THR 320 X PRO 321 n 321 PRO 321 X PHE 322 n 322 PHE 322 X PHE 323 n 323 PHE 323 X LYS 324 n 324 LYS 324 X GLY 325 n 325 GLY 325 X TYR 326 n 326 TYR 326 X ARG 327 n 327 ARG 327 X PRO 328 n 328 PRO 328 X GLN 329 n 329 GLN 329 X PHE 330 n 330 PHE 330 X TYR 331 n 331 TYR 331 X PHE 332 n 332 PHE 332 X ARG 333 n 333 ARG 333 X THR 334 n 334 THR 334 X THR 335 n 335 THR 335 X ASP 336 n 336 ASP 336 X VAL 337 n 337 VAL 337 X THR 338 n 338 THR 338 X GLY 339 n 339 GLY 339 X THR 340 n 340 THR 340 X ILE 341 n 341 ILE 341 X GLU 342 n 342 GLU 342 X LEU 343 n 343 LEU 343 X PRO 344 n 344 PRO 344 X GLU 345 n 345 GLU 345 X GLY 346 n 346 GLY 346 X VAL 347 n 347 VAL 347 X GLU 348 n 348 GLU 348 X MET 349 n 349 MET 349 X VAL 350 n 350 VAL 350 X MET 351 n 351 MET 351 X PRO 352 n 352 PRO 352 X GLY 353 n 353 GLY 353 X ASP 354 n 354 ASP 354 X ASN 355 n 355 ASN 355 X ILE 356 n 356 ILE 356 X LYS 357 n 357 LYS 357 X MET 358 n 358 MET 358 X VAL 359 n 359 VAL 359 X VAL 360 n 360 VAL 360 X THR 361 n 361 THR 361 X LEU 362 n 362 LEU 362 X ILE 363 n 363 ILE 363 X HIS 364 n 364 HIS 364 X PRO 365 n 365 PRO 365 X ILE 366 n 366 ILE 366 X ALA 367 n 367 ALA 367 X MET 368 n 368 MET 368 X ASP 369 n 369 ASP 369 X ASP 370 n 370 ASP 370 X GLY 371 n 371 GLY 371 X LEU 372 n 372 LEU 372 X ARG 373 n 373 ARG 373 X PHE 374 n 374 PHE 374 X ALA 375 n 375 ALA 375 X ILE 376 n 376 ILE 376 X ARG 377 n 377 ARG 377 X GLU 378 n 378 GLU 378 X GLY 379 n 379 GLY 379 X GLY 380 n 380 GLY 380 X ARG 381 n 381 ARG 381 X THR 382 n 382 THR 382 X VAL 383 n 383 VAL 383 X GLY 384 n 384 GLY 384 X ALA 385 n 385 ALA 385 X GLY 386 n 386 GLY 386 X VAL 387 n 387 VAL 387 X VAL 388 n 388 VAL 388 X ALA 389 n 389 ALA 389 X LYS 390 n 390 LYS 390 X VAL 391 n 391 VAL 391 X LEU 392 n 392 LEU 392 X SER 393 n 393 SER 393 X ALA 1 n 1 ALA 1 L THR 2 n 2 THR 2 L VAL 3 n 3 VAL 3 L ASN 4 n 4 ASN 4 L GLN 5 n 5 GLN 5 L LEU 6 n 6 LEU 6 L VAL 7 n 7 VAL 7 L ARG 8 n 8 ARG 8 L LYS 9 n 9 LYS 9 L PRO 10 n 10 PRO 10 L ARG 11 n 11 ARG 11 L ALA 12 n 12 ALA 12 L ARG 13 n 13 ARG 13 L LYS 14 n 14 LYS 14 L VAL 15 n 15 VAL 15 L ALA 16 n 16 ALA 16 L LYS 17 n 17 LYS 17 L SER 18 n 18 SER 18 L ASN 19 n 19 ASN 19 L VAL 20 n 20 VAL 20 L PRO 21 n 21 PRO 21 L ALA 22 n 22 ALA 22 L LEU 23 n 23 LEU 23 L GLU 24 n 24 GLU 24 L ALA 25 n 25 ALA 25 L CYS 26 n 26 CYS 26 L PRO 27 n 27 PRO 27 L GLN 28 n 28 GLN 28 L LYS 29 n 29 LYS 29 L ARG 30 n 30 ARG 30 L GLY 31 n 31 GLY 31 L VAL 32 n 32 VAL 32 L CYS 33 n 33 CYS 33 L THR 34 n 34 THR 34 L ARG 35 n 35 ARG 35 L VAL 36 n 36 VAL 36 L TYR 37 n 37 TYR 37 L THR 38 n 38 THR 38 L THR 39 n 39 THR 39 L THR 40 n 40 THR 40 L PRO 41 n 41 PRO 41 L LYS 42 n 42 LYS 42 L LYS 43 n 43 LYS 43 L PRO 44 n 44 PRO 44 L ASN 45 n 45 ASN 45 L SER 46 n 46 SER 46 L ALA 47 n 47 ALA 47 L LEU 48 n 48 LEU 48 L ARG 49 n 49 ARG 49 L LYS 50 n 50 LYS 50 L VAL 51 n 51 VAL 51 L CYS 52 n 52 CYS 52 L ARG 53 n 53 ARG 53 L VAL 54 n 54 VAL 54 L ARG 55 n 55 ARG 55 L LEU 56 n 56 LEU 56 L THR 57 n 57 THR 57 L ASN 58 n 58 ASN 58 L GLY 59 n 59 GLY 59 L PHE 60 n 60 PHE 60 L GLU 61 n 61 GLU 61 L VAL 62 n 62 VAL 62 L THR 63 n 63 THR 63 L SER 64 n 64 SER 64 L TYR 65 n 65 TYR 65 L ILE 66 n 66 ILE 66 L GLY 67 n 67 GLY 67 L GLY 68 n 68 GLY 68 L GLU 69 n 69 GLU 69 L GLY 70 n 70 GLY 70 L HIS 71 n 71 HIS 71 L ASN 72 n 72 ASN 72 L LEU 73 n 73 LEU 73 L GLN 74 n 74 GLN 74 L GLU 75 n 75 GLU 75 L HIS 76 n 76 HIS 76 L SER 77 n 77 SER 77 L VAL 78 n 78 VAL 78 L ILE 79 n 79 ILE 79 L LEU 80 n 80 LEU 80 L ILE 81 n 81 ILE 81 L ARG 82 n 82 ARG 82 L GLY 83 n 83 GLY 83 L GLY 84 n 84 GLY 84 L ARG 85 n 85 ARG 85 L VAL 86 n 86 VAL 86 L LYS 87 n 87 LYS 87 L ASP 88 n 88 ASP 88 L LEU 89 n 89 LEU 89 L PRO 90 n 90 PRO 90 L GLY 91 n 91 GLY 91 L VAL 92 n 92 VAL 92 L ARG 93 n 93 ARG 93 L TYR 94 n 94 TYR 94 L HIS 95 n 95 HIS 95 L THR 96 n 96 THR 96 L VAL 97 n 97 VAL 97 L ARG 98 n 98 ARG 98 L GLY 99 n 99 GLY 99 L ALA 100 n 100 ALA 100 L LEU 101 n 101 LEU 101 L ASP 102 n 102 ASP 102 L CYS 103 n 103 CYS 103 L SER 104 n 104 SER 104 L GLY 105 n 105 GLY 105 L VAL 106 n 106 VAL 106 L LYS 107 n 107 LYS 107 L ASP 108 n 108 ASP 108 L ARG 109 n 109 ARG 109 L LYS 110 n 110 LYS 110 L GLN 111 n 111 GLN 111 L ALA 112 n 112 ALA 112 L ARG 113 n 113 ARG 113 L SER 114 n 114 SER 114 L LYS 115 n 115 LYS 115 L TYR 116 n 116 TYR 116 L GLY 117 n 117 GLY 117 L VAL 118 n 118 VAL 118 L LYS 119 n 119 LYS 119 L ARG 120 n 120 ARG 120 L PRO 121 n 121 PRO 121 L LYS 122 n 122 LYS 122 L ALA 123 n 123 ALA 123 L ALA 1 n 1 ALA 1 I LYS 2 n 2 LYS 2 I LYS 3 n 3 LYS 3 I VAL 4 n 4 VAL 4 I GLN 5 n 5 GLN 5 I ALA 6 n 6 ALA 6 I TYR 7 n 7 TYR 7 I VAL 8 n 8 VAL 8 I LYS 9 n 9 LYS 9 I LEU 10 n 10 LEU 10 I GLN 11 n 11 GLN 11 I VAL 12 n 12 VAL 12 I ALA 13 n 13 ALA 13 I ALA 14 n 14 ALA 14 I GLY 15 n 15 GLY 15 I MET 16 n 16 MET 16 I ALA 17 n 17 ALA 17 I ASN 18 n 18 ASN 18 I PRO 19 n 19 PRO 19 I SER 20 n 20 SER 20 I PRO 21 n 21 PRO 21 I PRO 22 n 22 PRO 22 I VAL 23 n 23 VAL 23 I GLY 24 n 24 GLY 24 I PRO 25 n 25 PRO 25 I ALA 26 n 26 ALA 26 I LEU 27 n 27 LEU 27 I GLY 28 n 28 GLY 28 I GLN 29 n 29 GLN 29 I GLN 30 n 30 GLN 30 I GLY 31 n 31 GLY 31 I VAL 32 n 32 VAL 32 I ASN 33 n 33 ASN 33 I ILE 34 n 34 ILE 34 I MET 35 n 35 MET 35 I GLU 36 n 36 GLU 36 I PHE 37 n 37 PHE 37 I CYS 38 n 38 CYS 38 I LYS 39 n 39 LYS 39 I ALA 40 n 40 ALA 40 I PHE 41 n 41 PHE 41 I ASN 42 n 42 ASN 42 I ALA 43 n 43 ALA 43 I LYS 44 n 44 LYS 44 I THR 45 n 45 THR 45 I ASP 46 n 46 ASP 46 I SER 47 n 47 SER 47 I ILE 48 n 48 ILE 48 I GLU 49 n 49 GLU 49 I LYS 50 n 50 LYS 50 I GLY 51 n 51 GLY 51 I LEU 52 n 52 LEU 52 I PRO 53 n 53 PRO 53 I ILE 54 n 54 ILE 54 I PRO 55 n 55 PRO 55 I VAL 56 n 56 VAL 56 I VAL 57 n 57 VAL 57 I ILE 58 n 58 ILE 58 I THR 59 n 59 THR 59 I VAL 60 n 60 VAL 60 I TYR 61 n 61 TYR 61 I ALA 62 n 62 ALA 62 I ASP 63 n 63 ASP 63 I ARG 64 n 64 ARG 64 I SER 65 n 65 SER 65 I PHE 66 n 66 PHE 66 I THR 67 n 67 THR 67 I PHE 68 n 68 PHE 68 I VAL 69 n 69 VAL 69 I THR 70 n 70 THR 70 I LYS 71 n 71 LYS 71 I THR 72 n 72 THR 72 I PRO 73 n 73 PRO 73 I PRO 74 n 74 PRO 74 I ALA 75 n 75 ALA 75 I ALA 76 n 76 ALA 76 I VAL 77 n 77 VAL 77 I LEU 78 n 78 LEU 78 I LEU 79 n 79 LEU 79 I LYS 80 n 80 LYS 80 I LYS 81 n 81 LYS 81 I ALA 82 n 82 ALA 82 I ALA 83 n 83 ALA 83 I GLY 84 n 84 GLY 84 I ILE 85 n 85 ILE 85 I LYS 86 n 86 LYS 86 I SER 87 n 87 SER 87 I GLY 88 n 88 GLY 88 I SER 89 n 89 SER 89 I GLY 90 n 90 GLY 90 I LYS 91 n 91 LYS 91 I PRO 92 n 92 PRO 92 I ASN 93 n 93 ASN 93 I LYS 94 n 94 LYS 94 I ASP 95 n 95 ASP 95 I LYS 96 n 96 LYS 96 I VAL 97 n 97 VAL 97 I GLY 98 n 98 GLY 98 I LYS 99 n 99 LYS 99 I ILE 100 n 100 ILE 100 I SER 101 n 101 SER 101 I ARG 102 n 102 ARG 102 I ALA 103 n 103 ALA 103 I GLN 104 n 104 GLN 104 I LEU 105 n 105 LEU 105 I GLN 106 n 106 GLN 106 I GLU 107 n 107 GLU 107 I ILE 108 n 108 ILE 108 I ALA 109 n 109 ALA 109 I GLN 110 n 110 GLN 110 I THR 111 n 111 THR 111 I LYS 112 n 112 LYS 112 I ALA 113 n 113 ALA 113 I ALA 114 n 114 ALA 114 I ASP 115 n 115 ASP 115 I MET 116 n 116 MET 116 I THR 117 n 117 THR 117 I GLY 118 n 118 GLY 118 I ALA 119 n 119 ALA 119 I ASP 120 n 120 ASP 120 I ILE 121 n 121 ILE 121 I GLU 122 n 122 GLU 122 I ALA 123 n 123 ALA 123 I MET 124 n 124 MET 124 I THR 125 n 125 THR 125 I ARG 126 n 126 ARG 126 I SER 127 n 127 SER 127 I ILE 128 n 128 ILE 128 I GLU 129 n 129 GLU 129 I GLY 130 n 130 GLY 130 I THR 131 n 131 THR 131 I ALA 132 n 132 ALA 132 I ARG 133 n 133 ARG 133 I SER 134 n 134 SER 134 I MET 135 n 135 MET 135 I GLY 136 n 136 GLY 136 I LEU 137 n 137 LEU 137 I VAL 138 n 138 VAL 138 I VAL 139 n 139 VAL 139 I GLU 140 n 140 GLU 140 I ASP 141 n 141 ASP 141 I C 2 n 1 C 2 Y G 3 n 2 G 3 Y G 4 n 3 G 4 Y A 5 n 4 A 5 Y U 6 n 5 U 6 Y U 7 n 6 U 7 Y U 8 n 7 U 8 Y A 9 n 8 A 9 Y G 10 n 9 G 10 Y C 11 n 10 C 11 Y U 12 n 11 U 12 Y C 13 n 12 C 13 Y A 14 n 13 A 14 Y G 15 n 14 G 15 Y U 16 n 15 U 16 Y U 17 n 16 U 17 Y G 18 n 17 G 18 Y G 19 n 18 G 19 Y G 20 n 19 G 20 Y A 21 n 20 A 21 Y G 22 n 21 G 22 Y A 23 n 22 A 23 Y G 24 n 23 G 24 Y C 25 n 24 C 25 Y G 26 n 25 G 26 Y C 27 n 26 C 27 Y C 28 n 27 C 28 Y A 29 n 28 A 29 Y G 30 n 29 G 30 Y A 31 n 30 A 31 Y C 32 n 31 C 32 Y U 33 n 32 U 33 Y G 34 n 33 G 34 Y A 35 n 34 A 35 Y A 36 n 35 A 36 Y G 37 n 36 G 37 Y A 38 n 37 A 38 Y U 39 n 38 U 39 Y C 40 n 39 C 40 Y U 41 n 40 U 41 Y G 42 n 41 G 42 Y G 43 n 42 G 43 Y A 44 n 43 A 44 Y C 48 n 44 C 48 Y C 49 n 45 C 49 Y U 50 n 46 U 50 Y G 51 n 47 G 51 Y U 52 n 48 U 52 Y G 53 n 49 G 53 Y U 54 n 50 U 54 Y U 55 n 51 U 55 Y C 56 n 52 C 56 Y G 57 n 53 G 57 Y A 58 n 54 A 58 Y U 59 n 55 U 59 Y C 60 n 56 C 60 Y C 61 n 57 C 61 Y A 62 n 58 A 62 Y C 63 n 59 C 63 Y A 64 n 60 A 64 Y G 65 n 61 G 65 Y A 66 n 62 A 66 Y A 67 n 63 A 67 Y U 68 n 64 U 68 Y U 69 n 65 U 69 Y C 70 n 66 C 70 Y G 71 n 67 G 71 Y C 72 n 68 C 72 Y A 73 n 69 A 73 Y C 74 n 70 C 74 Y C 75 n 71 C 75 Y C 76 n 72 C 76 Y U 77 n 73 U 77 Y C 78 n 74 C 78 Y C 79 n 75 C 79 Y C 80 n 76 C 80 Y G 81 n 77 G 81 Y U 82 n 78 U 82 Y A 83 n 79 A 83 Y G 84 n 80 G 84 Y G 85 n 81 G 85 Y G 86 n 82 G 86 Y G 87 n 83 G 87 Y U 88 n 84 U 88 Y U 89 n 85 U 89 Y C 526 n 1 C 526 A G 527 n 2 G 527 A C 528 n 3 C 528 A G 529 n 4 G 529 A G 530 n 5 G 530 A U 531 n 6 U 531 A A 532 n 7 A 532 A A 533 n 8 A 533 A U 534 n 9 U 534 A G 1487 n 1 G 1487 C G 1488 n 2 G 1488 C G 1489 n 3 G 1489 C C 1490 n 4 C 1490 C G 1491 n 5 G 1491 C A 1492 n 6 A 1492 C A 1493 n 7 A 1493 C G 1494 n 8 G 1494 C U 1495 n 9 U 1495 C C 1496 n 10 C 1496 C G 1497 n 11 G 1497 C A 1054 n 1 A 1054 B G 1055 n 2 G 1055 B G 1056 n 3 G 1056 B A 1057 n 4 A 1057 B U 1058 n 5 U 1058 B G 1059 n 6 G 1059 B U 1060 n 7 U 1060 B U 1061 n 8 U 1061 B G 1062 n 9 G 1062 B G 1063 n 10 G 1063 B C 1064 n 11 C 1064 B U 1065 n 12 U 1065 B U 1066 n 13 U 1066 B A 1067 n 14 A 1067 B G 1068 n 15 G 1068 B A 1069 n 16 A 1069 B A 1070 n 17 A 1070 B G 1071 n 18 G 1071 B C 1072 n 19 C 1072 B A 1073 n 20 A 1073 B G 1074 n 21 G 1074 B C 1075 n 22 C 1075 B C 1076 n 23 C 1076 B A 1077 n 24 A 1077 B U 1078 n 25 U 1078 B C 1079 n 26 C 1079 B A 1080 n 27 A 1080 B U 1081 n 28 U 1081 B U 1082 n 29 U 1082 B U 1083 n 30 U 1083 B A 1084 n 31 A 1084 B A 1085 n 32 A 1085 B A 1086 n 33 A 1086 B G 1087 n 34 G 1087 B A 1088 n 35 A 1088 B A 1089 n 36 A 1089 B A 1090 n 37 A 1090 B G 1091 n 38 G 1091 B C 1092 n 39 C 1092 B G 1093 n 40 G 1093 B U 1094 n 41 U 1094 B A 1095 n 42 A 1095 B A 1096 n 43 A 1096 B U 1097 n 44 U 1097 B A 1098 n 45 A 1098 B G 1099 n 46 G 1099 B C 1100 n 47 C 1100 B U 1101 n 48 U 1101 B U 2647 n 1 U 2647 D G 2648 n 2 G 2648 D C 2649 n 3 C 2649 D U 2650 n 4 U 2650 D C 2651 n 5 C 2651 D C 2652 n 6 C 2652 D U 2653 n 7 U 2653 D A 2654 n 8 A 2654 D G 2655 n 9 G 2655 D U 2656 n 10 U 2656 D A 2657 n 11 A 2657 D C 2658 n 12 C 2658 D G 2659 n 13 G 2659 D A 2660 n 14 A 2660 D G 2661 n 15 G 2661 D A 2662 n 16 A 2662 D G 2663 n 17 G 2663 D G 2664 n 18 G 2664 D A 2665 n 19 A 2665 D C 2666 n 20 C 2666 D C 2667 n 21 C 2667 D G 2668 n 22 G 2668 D G 2669 n 23 G 2669 D A 2670 n 24 A 2670 D G 2671 n 25 G 2671 D U 2672 n 26 U 2672 D G 2673 n 27 G 2673 D G 2674 n 28 G 2674 D G 1907 n 1 G 1907 E C 1908 n 2 C 1908 E C 1909 n 3 C 1909 E G 1910 n 4 G 1910 E U 1911 n 5 U 1911 E A 1912 n 6 A 1912 E A 913 n 7 A 913 E C 1914 n 8 C 1914 E U 1915 n 9 U 1915 E A 1916 n 10 A 1916 E U 1917 n 11 U 1917 E A 1918 n 12 A 1918 E A 1919 n 13 A 1919 E C 1920 n 14 C 1920 E G 1921 n 15 G 1921 E G 1922 n 16 G 1922 E U 1923 n 17 U 1923 E author_defined_assembly 9 nonameric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 Y Y P P G C 10 79 1.57 0 855 0 198 657 Model of tRNA(Leu)-EF-Tu in the ribosomal pre-accommodated state revealed by cryo-EM 1 N N 2 N N 3 N N 4 N N 5 N N 6 N N 7 N N 8 N N 9 N N RIBOSOMAL PROTEIN/RNA protein translation, ternary complex, A/T-tRNA, automated data collection, Antibiotic resistance, Elongation factor, GTP-binding, Membrane, Methylation, Nucleotide-binding, Phosphoprotein, Protein biosynthesis, Ribonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding, tRNA-binding, RIBOSOMAL PROTEIN-RNA COMPLEX EFTU_ECOLI UNP 1 2 P0A6N1 SKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVD CPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQY DFPGDDTPIVRGSALKALEGDAEWEAKILELAGFLDSYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGE EVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHT PFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVLS RS12_ECOLI UNP 2 2 P0A7S3 ATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKKPNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVIL IRGGRVKDLPGVRYHTVRGALDCSGVKDRKQARSKYGVKRPKA RL11_ECOLI UNP 3 2 P0A7J7 AKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNAKTDSIEKGLPIPVVITVYADRSFTFVTKTPPAAVLLK KAAGIKSGSGKPNKDKVGKISRAQLQEIAQTKAADMTGADIEAMTRSIEGTARSMGLVVED 3EQ4 PDB 4 2 3EQ4 CGGAUUUAGCUCAGUUGGGAGAGCGCCAGACUGAAGAUCUGGACCUGUGUUCGAUCCACAGAAUUCGCACCCUCCCGUAG GGGUU 3EQ4 PDB 5 526 3EQ4 CGCGGUAAU 3EQ4 PDB 6 1487 3EQ4 GGGCGAAGUCG 3EQ4 PDB 7 1054 3EQ4 AGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCU 3EQ4 PDB 8 2647 3EQ4 UGCUCCUAGUACGAGAGGACCGGAGUGG 3EQ4 PDB 9 1907 3EQ4 GCCGUAACUAUAACGGU 2 394 3EQ4 1 393 P0A6N1 X 1 1 393 2 124 3EQ4 1 123 P0A7S3 L 2 1 123 2 142 3EQ4 1 141 P0A7J7 I 3 1 141 2 89 3EQ4 2 89 3EQ4 Y 4 1 85 526 534 3EQ4 526 534 3EQ4 A 5 1 9 1487 1497 3EQ4 1487 1497 3EQ4 C 6 1 11 1054 1101 3EQ4 1054 1101 3EQ4 B 7 1 48 2647 2674 3EQ4 2647 2674 3EQ4 D 8 1 28 1907 1923 3EQ4 1907 1923 3EQ4 E 9 1 17 1 P 1