0.023804
-0.000037
-0.000115
0.000000
0.015751
-0.003144
0.000000
0.000000
0.013598
0.00000
0.00000
0.00000
Gruetter, C.
Klueter, S.
Getlik, M.
Rauh, D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
78.710
89.710
89.910
42.010
63.490
74.990
C24 H25 N5 O
399.488
1-[1-(3-aminophenyl)-3-tert-butyl-1H-pyrazol-5-yl]-3-naphthalen-1-ylurea
1-[2-(3-Amino-phenyl)-5-tert-butyl-2H-pyrazol-3-yl]-3-naphthalen-1-yl-urea
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Y
1
N
C
Y
2
N
C
Y
3
N
C
Y
4
N
C
Y
5
N
C
Y
6
N
C
Y
7
N
C
Y
8
N
C
Y
9
N
C
Y
10
N
C
N
11
N
N
N
12
N
C
N
13
N
O
N
14
N
N
Y
15
N
C
Y
16
N
C
Y
17
N
C
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
C
Y
22
N
N
Y
23
N
N
Y
24
N
C
Y
25
N
C
Y
26
N
C
Y
27
N
C
Y
28
N
C
Y
29
N
C
N
30
N
N
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
N
N
57
S
C
N
58
N
C
N
59
N
O
N
60
N
C
N
61
N
O
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
N
N
70
S
C
N
71
N
C
N
72
N
O
N
73
N
C
N
74
N
C
N
75
N
C
N
76
N
N
N
77
N
C
N
78
N
N
N
79
N
N
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
N
N
97
S
C
N
98
N
C
N
99
N
O
N
100
N
C
N
101
N
C
N
102
N
O
N
103
N
N
N
104
N
O
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
S
C
N
115
N
C
N
116
N
O
N
117
N
C
N
118
N
C
N
119
N
O
N
120
N
O
N
121
N
O
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
N
N
130
R
C
N
131
N
C
N
132
N
O
N
133
N
C
N
134
N
S
N
135
N
O
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
N
N
144
S
C
N
145
N
C
N
146
N
O
N
147
N
C
N
148
N
C
N
149
N
C
N
150
N
O
N
151
N
N
N
152
N
O
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
N
N
164
S
C
N
165
N
C
N
166
N
O
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
O
N
171
N
O
N
172
N
O
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
N
N
183
N
C
N
184
N
C
N
185
N
O
N
186
N
O
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
N
N
193
S
C
N
194
N
C
N
195
N
O
N
196
N
C
Y
197
N
C
Y
198
N
N
Y
199
N
C
Y
200
N
C
Y
201
N
N
N
202
N
O
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
O
N
214
N
H
N
215
N
H
N
216
N
N
N
217
S
C
N
218
N
C
N
219
N
O
N
220
S
C
N
221
N
C
N
222
N
C
N
223
N
C
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
N
N
239
S
C
N
240
N
C
N
241
N
O
N
242
N
C
N
243
N
C
N
244
N
C
N
245
N
C
N
246
N
O
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
N
N
261
S
C
N
262
N
C
N
263
N
O
N
264
N
C
N
265
N
C
N
266
N
C
N
267
N
C
N
268
N
N
N
269
N
O
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
N
N
286
S
C
N
287
N
C
N
288
N
O
N
289
N
C
N
290
N
C
N
291
N
S
N
292
N
C
N
293
N
O
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
N
N
306
S
C
N
307
N
C
N
308
N
O
N
309
N
C
Y
310
N
C
Y
311
N
C
Y
312
N
C
Y
313
N
C
Y
314
N
C
Y
315
N
C
N
316
N
O
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
N
N
329
S
C
N
330
N
C
N
331
N
O
N
332
N
C
N
333
N
C
N
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
N
N
346
S
C
N
347
N
C
N
348
N
O
N
349
N
C
N
350
N
O
N
351
N
O
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
N
N
360
S
C
N
361
N
C
N
362
N
O
N
363
R
C
N
364
N
O
N
365
N
C
N
366
N
O
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
N
N
377
S
C
N
378
N
C
N
379
N
O
N
380
N
C
Y
381
N
C
Y
382
N
C
Y
383
N
C
Y
384
N
N
Y
385
N
C
Y
386
N
C
Y
387
N
C
Y
388
N
C
Y
389
N
C
N
390
N
O
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
N
N
404
S
C
N
405
N
C
N
406
N
O
N
407
N
C
Y
408
N
C
Y
409
N
C
Y
410
N
C
Y
411
N
C
Y
412
N
C
Y
413
N
C
N
414
N
O
N
415
N
O
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
N
N
428
S
C
N
429
N
C
N
430
N
O
N
431
N
C
N
432
N
C
N
433
N
C
N
434
N
O
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
Y
1
N
doub
Y
2
N
sing
Y
3
N
sing
Y
4
N
doub
N
5
N
sing
Y
6
N
sing
N
7
N
sing
Y
8
N
doub
N
9
N
sing
Y
10
N
sing
N
11
N
sing
Y
12
N
doub
Y
13
N
sing
N
14
N
sing
Y
15
N
doub
N
16
N
sing
Y
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
doub
N
23
N
sing
N
24
N
sing
N
25
N
sing
Y
26
N
doub
Y
27
N
sing
Y
28
N
sing
N
29
N
sing
N
30
N
sing
Y
31
N
doub
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
Y
44
N
sing
Y
45
N
sing
Y
46
N
doub
Y
47
N
sing
Y
48
N
doub
N
49
N
sing
Y
50
N
sing
N
51
N
sing
Y
52
N
doub
N
53
N
sing
Y
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
doub
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
doub
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
doub
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
doub
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
doub
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
doub
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
doub
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
doub
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
doub
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
doub
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
doub
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
Y
198
N
sing
Y
199
N
doub
Y
200
N
doub
N
201
N
sing
Y
202
N
sing
N
203
N
sing
Y
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
doub
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
doub
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
doub
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
doub
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
Y
306
N
doub
Y
307
N
sing
Y
308
N
sing
N
309
N
sing
Y
310
N
doub
N
311
N
sing
Y
312
N
doub
N
313
N
sing
Y
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
doub
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
doub
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
doub
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
doub
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
Y
375
N
doub
Y
376
N
sing
Y
377
N
sing
N
378
N
sing
Y
379
N
doub
Y
380
N
sing
Y
381
N
sing
N
382
N
sing
Y
383
N
sing
Y
384
N
doub
N
385
N
sing
Y
386
N
doub
N
387
N
sing
Y
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
doub
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
Y
403
N
doub
Y
404
N
sing
Y
405
N
sing
N
406
N
sing
Y
407
N
doub
N
408
N
sing
Y
409
N
doub
N
410
N
sing
Y
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
doub
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
US
Nat.Chem.Biol.
1552-4450
5
394
396
10.1038/nchembio.162
19396179
A new screening assay for allosteric inhibitors of cSrc
2009
10.2210/pdb3f3t/pdb
pdb_00003f3t
90
1
Dynamically bendable mirror
CCD
2008-06-26
MARRESEARCH
Si(111)
SINGLE WAVELENGTH
M
x-ray
1
0.978960
1.0
X10SA
SLS
0.978960
SYNCHROTRON
SLS BEAMLINE X10SA
32742.711
Proto-oncogene tyrosine-protein kinase Src
2.7.10.2
Kinase Domain, UNP residues 251-533
S345C
2
man
polymer
399.488
1-[1-(3-aminophenyl)-3-tert-butyl-1H-pyrazol-5-yl]-3-naphthalen-1-ylurea
2
syn
non-polymer
18.015
water
98
nat
water
pp60c-src, p60-Src, c-Src
no
no
GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA
VVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL
ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC
PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGENL
GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA
VVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL
ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC
PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGENL
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Chicken
sample
9031
Gallus gallus
562
Escherichia coli
BL21 (DE3)
plasmid
pSKB3
1
3.00
58.93
VAPOR DIFFUSION, HANGING DROP
6.9
10% PEG 4000, 0.05M sodium acetate, 4% glycerol, 0.1M MES , pH 6.9, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
database_2
struct_ref_seq_dif
struct_site
chem_comp_atom
chem_comp_bond
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Database references
Derived calculations
Data collection
Refinement description
1
0
2009-03-03
1
1
2011-07-13
1
2
2021-11-10
1
3
2023-11-01
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
PDBJ
2008-10-31
REL
REL
1AU
1-[1-(3-aminophenyl)-3-tert-butyl-1H-pyrazol-5-yl]-3-naphthalen-1-ylurea
HOH
water
2OIQ
PDB ENTRY 2OIQ
PDB
experimental model
DRG
1
2
1AU
1AU
1
A
DRG
1
2
1AU
1AU
534
A
HOH
2
3
HOH
HOH
2
A
HOH
3
3
HOH
HOH
3
A
HOH
4
3
HOH
HOH
4
A
HOH
7
3
HOH
HOH
7
A
HOH
8
3
HOH
HOH
8
A
HOH
9
3
HOH
HOH
9
A
HOH
10
3
HOH
HOH
10
A
HOH
11
3
HOH
HOH
11
A
HOH
14
3
HOH
HOH
14
A
HOH
16
3
HOH
HOH
16
A
HOH
22
3
HOH
HOH
22
A
HOH
23
3
HOH
HOH
23
A
HOH
25
3
HOH
HOH
25
A
HOH
27
3
HOH
HOH
27
A
HOH
28
3
HOH
HOH
28
A
HOH
30
3
HOH
HOH
30
A
HOH
33
3
HOH
HOH
33
A
HOH
34
3
HOH
HOH
34
A
HOH
37
3
HOH
HOH
37
A
HOH
38
3
HOH
HOH
38
A
HOH
39
3
HOH
HOH
39
A
HOH
55
3
HOH
HOH
55
A
HOH
58
3
HOH
HOH
58
A
HOH
62
3
HOH
HOH
62
A
HOH
63
3
HOH
HOH
63
A
HOH
64
3
HOH
HOH
64
A
HOH
65
3
HOH
HOH
65
A
HOH
66
3
HOH
HOH
66
A
HOH
67
3
HOH
HOH
67
A
HOH
76
3
HOH
HOH
76
A
HOH
77
3
HOH
HOH
77
A
HOH
79
3
HOH
HOH
79
A
HOH
80
3
HOH
HOH
80
A
HOH
85
3
HOH
HOH
85
A
HOH
89
3
HOH
HOH
89
A
HOH
90
3
HOH
HOH
90
A
HOH
91
3
HOH
HOH
91
A
HOH
92
3
HOH
HOH
92
A
HOH
94
3
HOH
HOH
94
A
HOH
95
3
HOH
HOH
95
A
HOH
96
3
HOH
HOH
96
A
HOH
97
3
HOH
HOH
97
A
HOH
99
3
HOH
HOH
99
A
HOH
114
3
HOH
HOH
114
A
HOH
116
3
HOH
HOH
116
A
HOH
118
3
HOH
HOH
118
A
HOH
119
3
HOH
HOH
119
A
HOH
120
3
HOH
HOH
120
A
HOH
121
3
HOH
HOH
121
A
HOH
122
3
HOH
HOH
122
A
HOH
128
3
HOH
HOH
128
A
HOH
129
3
HOH
HOH
129
A
HOH
132
3
HOH
HOH
132
A
HOH
133
3
HOH
HOH
133
A
HOH
134
3
HOH
HOH
134
A
HOH
15
3
HOH
HOH
15
B
HOH
18
3
HOH
HOH
18
B
HOH
19
3
HOH
HOH
19
B
HOH
20
3
HOH
HOH
20
B
HOH
21
3
HOH
HOH
21
B
HOH
26
3
HOH
HOH
26
B
HOH
32
3
HOH
HOH
32
B
HOH
44
3
HOH
HOH
44
B
HOH
45
3
HOH
HOH
45
B
HOH
46
3
HOH
HOH
46
B
HOH
47
3
HOH
HOH
47
B
HOH
48
3
HOH
HOH
48
B
HOH
49
3
HOH
HOH
49
B
HOH
50
3
HOH
HOH
50
B
HOH
51
3
HOH
HOH
51
B
HOH
53
3
HOH
HOH
53
B
HOH
60
3
HOH
HOH
60
B
HOH
61
3
HOH
HOH
61
B
HOH
69
3
HOH
HOH
69
B
HOH
70
3
HOH
HOH
70
B
HOH
71
3
HOH
HOH
71
B
HOH
73
3
HOH
HOH
73
B
HOH
74
3
HOH
HOH
74
B
HOH
75
3
HOH
HOH
75
B
HOH
100
3
HOH
HOH
100
B
HOH
101
3
HOH
HOH
101
B
HOH
102
3
HOH
HOH
102
B
HOH
104
3
HOH
HOH
104
B
HOH
105
3
HOH
HOH
105
B
HOH
106
3
HOH
HOH
106
B
HOH
108
3
HOH
HOH
108
B
HOH
109
3
HOH
HOH
109
B
HOH
111
3
HOH
HOH
111
B
HOH
112
3
HOH
HOH
112
B
HOH
115
3
HOH
HOH
115
B
HOH
117
3
HOH
HOH
117
B
HOH
123
3
HOH
HOH
123
B
HOH
124
3
HOH
HOH
124
B
HOH
125
3
HOH
HOH
125
B
HOH
126
3
HOH
HOH
126
B
HOH
127
3
HOH
HOH
127
B
HOH
130
3
HOH
HOH
130
B
HOH
131
3
HOH
HOH
131
B
2.500
2.500
36.550
36.550
Phaser MODE: MR_AUTO
n
1
248
A
n
2
249
A
n
3
250
A
n
4
251
A
n
5
252
A
n
6
253
A
n
7
254
A
n
8
255
A
n
9
256
A
LYS
257
n
10
LYS
257
A
ASP
258
n
11
ASP
258
A
ALA
259
n
12
ALA
259
A
TRP
260
n
13
TRP
260
A
GLU
261
n
14
GLU
261
A
ILE
262
n
15
ILE
262
A
PRO
263
n
16
PRO
263
A
ARG
264
n
17
ARG
264
A
GLU
265
n
18
GLU
265
A
SER
266
n
19
SER
266
A
LEU
267
n
20
LEU
267
A
ARG
268
n
21
ARG
268
A
LEU
269
n
22
LEU
269
A
GLU
270
n
23
GLU
270
A
VAL
271
n
24
VAL
271
A
LYS
272
n
25
LYS
272
A
LEU
273
n
26
LEU
273
A
GLY
274
n
27
GLY
274
A
GLN
275
n
28
GLN
275
A
GLY
276
n
29
GLY
276
A
CYS
277
n
30
CYS
277
A
PHE
278
n
31
PHE
278
A
GLY
279
n
32
GLY
279
A
GLU
280
n
33
GLU
280
A
VAL
281
n
34
VAL
281
A
TRP
282
n
35
TRP
282
A
MET
283
n
36
MET
283
A
GLY
284
n
37
GLY
284
A
THR
285
n
38
THR
285
A
TRP
286
n
39
TRP
286
A
ASN
287
n
40
ASN
287
A
GLY
288
n
41
GLY
288
A
THR
289
n
42
THR
289
A
THR
290
n
43
THR
290
A
ARG
291
n
44
ARG
291
A
VAL
292
n
45
VAL
292
A
ALA
293
n
46
ALA
293
A
ILE
294
n
47
ILE
294
A
LYS
295
n
48
LYS
295
A
THR
296
n
49
THR
296
A
LEU
297
n
50
LEU
297
A
LYS
298
n
51
LYS
298
A
PRO
299
n
52
PRO
299
A
GLY
300
n
53
GLY
300
A
THR
301
n
54
THR
301
A
MET
302
n
55
MET
302
A
SER
303
n
56
SER
303
A
PRO
304
n
57
PRO
304
A
GLU
305
n
58
GLU
305
A
ALA
306
n
59
ALA
306
A
PHE
307
n
60
PHE
307
A
LEU
308
n
61
LEU
308
A
GLN
309
n
62
GLN
309
A
GLU
310
n
63
GLU
310
A
ALA
311
n
64
ALA
311
A
GLN
312
n
65
GLN
312
A
VAL
313
n
66
VAL
313
A
MET
314
n
67
MET
314
A
LYS
315
n
68
LYS
315
A
LYS
316
n
69
LYS
316
A
LEU
317
n
70
LEU
317
A
ARG
318
n
71
ARG
318
A
HIS
319
n
72
HIS
319
A
GLU
320
n
73
GLU
320
A
LYS
321
n
74
LYS
321
A
LEU
322
n
75
LEU
322
A
VAL
323
n
76
VAL
323
A
GLN
324
n
77
GLN
324
A
LEU
325
n
78
LEU
325
A
TYR
326
n
79
TYR
326
A
ALA
327
n
80
ALA
327
A
VAL
328
n
81
VAL
328
A
VAL
329
n
82
VAL
329
A
SER
330
n
83
SER
330
A
GLU
331
n
84
GLU
331
A
GLU
332
n
85
GLU
332
A
PRO
333
n
86
PRO
333
A
ILE
334
n
87
ILE
334
A
TYR
335
n
88
TYR
335
A
ILE
336
n
89
ILE
336
A
VAL
337
n
90
VAL
337
A
THR
338
n
91
THR
338
A
GLU
339
n
92
GLU
339
A
TYR
340
n
93
TYR
340
A
MET
341
n
94
MET
341
A
SER
342
n
95
SER
342
A
LYS
343
n
96
LYS
343
A
GLY
344
n
97
GLY
344
A
CYS
345
n
98
CYS
345
A
LEU
346
n
99
LEU
346
A
LEU
347
n
100
LEU
347
A
ASP
348
n
101
ASP
348
A
PHE
349
n
102
PHE
349
A
LEU
350
n
103
LEU
350
A
LYS
351
n
104
LYS
351
A
GLY
352
n
105
GLY
352
A
GLU
353
n
106
GLU
353
A
MET
354
n
107
MET
354
A
GLY
355
n
108
GLY
355
A
LYS
356
n
109
LYS
356
A
TYR
357
n
110
TYR
357
A
LEU
358
n
111
LEU
358
A
ARG
359
n
112
ARG
359
A
LEU
360
n
113
LEU
360
A
PRO
361
n
114
PRO
361
A
GLN
362
n
115
GLN
362
A
LEU
363
n
116
LEU
363
A
VAL
364
n
117
VAL
364
A
ASP
365
n
118
ASP
365
A
MET
366
n
119
MET
366
A
ALA
367
n
120
ALA
367
A
ALA
368
n
121
ALA
368
A
GLN
369
n
122
GLN
369
A
ILE
370
n
123
ILE
370
A
ALA
371
n
124
ALA
371
A
SER
372
n
125
SER
372
A
GLY
373
n
126
GLY
373
A
MET
374
n
127
MET
374
A
ALA
375
n
128
ALA
375
A
TYR
376
n
129
TYR
376
A
VAL
377
n
130
VAL
377
A
GLU
378
n
131
GLU
378
A
ARG
379
n
132
ARG
379
A
MET
380
n
133
MET
380
A
ASN
381
n
134
ASN
381
A
TYR
382
n
135
TYR
382
A
VAL
383
n
136
VAL
383
A
HIS
384
n
137
HIS
384
A
ARG
385
n
138
ARG
385
A
ASP
386
n
139
ASP
386
A
LEU
387
n
140
LEU
387
A
ARG
388
n
141
ARG
388
A
ALA
389
n
142
ALA
389
A
ALA
390
n
143
ALA
390
A
ASN
391
n
144
ASN
391
A
ILE
392
n
145
ILE
392
A
LEU
393
n
146
LEU
393
A
VAL
394
n
147
VAL
394
A
GLY
395
n
148
GLY
395
A
GLU
396
n
149
GLU
396
A
ASN
397
n
150
ASN
397
A
LEU
398
n
151
LEU
398
A
VAL
399
n
152
VAL
399
A
CYS
400
n
153
CYS
400
A
LYS
401
n
154
LYS
401
A
VAL
402
n
155
VAL
402
A
ALA
403
n
156
ALA
403
A
ASP
404
n
157
ASP
404
A
PHE
405
n
158
PHE
405
A
GLY
406
n
159
GLY
406
A
LEU
407
n
160
LEU
407
A
n
161
408
A
n
162
409
A
n
163
410
A
n
164
411
A
n
165
412
A
n
166
413
A
n
167
414
A
n
168
415
A
n
169
416
A
n
170
417
A
n
171
418
A
n
172
419
A
n
173
420
A
n
174
421
A
n
175
422
A
n
176
423
A
PHE
424
n
177
PHE
424
A
PRO
425
n
178
PRO
425
A
ILE
426
n
179
ILE
426
A
LYS
427
n
180
LYS
427
A
TRP
428
n
181
TRP
428
A
THR
429
n
182
THR
429
A
ALA
430
n
183
ALA
430
A
PRO
431
n
184
PRO
431
A
GLU
432
n
185
GLU
432
A
ALA
433
n
186
ALA
433
A
ALA
434
n
187
ALA
434
A
LEU
435
n
188
LEU
435
A
TYR
436
n
189
TYR
436
A
GLY
437
n
190
GLY
437
A
ARG
438
n
191
ARG
438
A
PHE
439
n
192
PHE
439
A
THR
440
n
193
THR
440
A
ILE
441
n
194
ILE
441
A
LYS
442
n
195
LYS
442
A
SER
443
n
196
SER
443
A
ASP
444
n
197
ASP
444
A
VAL
445
n
198
VAL
445
A
TRP
446
n
199
TRP
446
A
SER
447
n
200
SER
447
A
PHE
448
n
201
PHE
448
A
GLY
449
n
202
GLY
449
A
ILE
450
n
203
ILE
450
A
LEU
451
n
204
LEU
451
A
LEU
452
n
205
LEU
452
A
THR
453
n
206
THR
453
A
GLU
454
n
207
GLU
454
A
LEU
455
n
208
LEU
455
A
THR
456
n
209
THR
456
A
THR
457
n
210
THR
457
A
LYS
458
n
211
LYS
458
A
GLY
459
n
212
GLY
459
A
ARG
460
n
213
ARG
460
A
VAL
461
n
214
VAL
461
A
PRO
462
n
215
PRO
462
A
TYR
463
n
216
TYR
463
A
PRO
464
n
217
PRO
464
A
GLY
465
n
218
GLY
465
A
MET
466
n
219
MET
466
A
VAL
467
n
220
VAL
467
A
ASN
468
n
221
ASN
468
A
ARG
469
n
222
ARG
469
A
GLU
470
n
223
GLU
470
A
VAL
471
n
224
VAL
471
A
LEU
472
n
225
LEU
472
A
ASP
473
n
226
ASP
473
A
GLN
474
n
227
GLN
474
A
VAL
475
n
228
VAL
475
A
GLU
476
n
229
GLU
476
A
ARG
477
n
230
ARG
477
A
GLY
478
n
231
GLY
478
A
TYR
479
n
232
TYR
479
A
ARG
480
n
233
ARG
480
A
MET
481
n
234
MET
481
A
PRO
482
n
235
PRO
482
A
CYS
483
n
236
CYS
483
A
PRO
484
n
237
PRO
484
A
PRO
485
n
238
PRO
485
A
GLU
486
n
239
GLU
486
A
CYS
487
n
240
CYS
487
A
PRO
488
n
241
PRO
488
A
GLU
489
n
242
GLU
489
A
SER
490
n
243
SER
490
A
LEU
491
n
244
LEU
491
A
HIS
492
n
245
HIS
492
A
ASP
493
n
246
ASP
493
A
LEU
494
n
247
LEU
494
A
MET
495
n
248
MET
495
A
CYS
496
n
249
CYS
496
A
GLN
497
n
250
GLN
497
A
CYS
498
n
251
CYS
498
A
TRP
499
n
252
TRP
499
A
ARG
500
n
253
ARG
500
A
LYS
501
n
254
LYS
501
A
ASP
502
n
255
ASP
502
A
PRO
503
n
256
PRO
503
A
GLU
504
n
257
GLU
504
A
GLU
505
n
258
GLU
505
A
ARG
506
n
259
ARG
506
A
PRO
507
n
260
PRO
507
A
THR
508
n
261
THR
508
A
PHE
509
n
262
PHE
509
A
GLU
510
n
263
GLU
510
A
TYR
511
n
264
TYR
511
A
LEU
512
n
265
LEU
512
A
GLN
513
n
266
GLN
513
A
ALA
514
n
267
ALA
514
A
PHE
515
n
268
PHE
515
A
LEU
516
n
269
LEU
516
A
GLU
517
n
270
GLU
517
A
ASP
518
n
271
ASP
518
A
TYR
519
n
272
TYR
519
A
PHE
520
n
273
PHE
520
A
THR
521
n
274
THR
521
A
SER
522
n
275
SER
522
A
THR
523
n
276
THR
523
A
GLU
524
n
277
GLU
524
A
PRO
525
n
278
PRO
525
A
GLN
526
n
279
GLN
526
A
TYR
527
n
280
TYR
527
A
GLN
528
n
281
GLN
528
A
PRO
529
n
282
PRO
529
A
GLY
530
n
283
GLY
530
A
GLU
531
n
284
GLU
531
A
ASN
532
n
285
ASN
532
A
LEU
533
n
286
LEU
533
A
n
1
248
B
n
2
249
B
n
3
250
B
n
4
251
B
n
5
252
B
n
6
253
B
n
7
254
B
n
8
255
B
ALA
256
n
9
ALA
256
B
LYS
257
n
10
LYS
257
B
ASP
258
n
11
ASP
258
B
ALA
259
n
12
ALA
259
B
TRP
260
n
13
TRP
260
B
GLU
261
n
14
GLU
261
B
ILE
262
n
15
ILE
262
B
PRO
263
n
16
PRO
263
B
ARG
264
n
17
ARG
264
B
GLU
265
n
18
GLU
265
B
SER
266
n
19
SER
266
B
LEU
267
n
20
LEU
267
B
ARG
268
n
21
ARG
268
B
LEU
269
n
22
LEU
269
B
GLU
270
n
23
GLU
270
B
VAL
271
n
24
VAL
271
B
LYS
272
n
25
LYS
272
B
LEU
273
n
26
LEU
273
B
GLY
274
n
27
GLY
274
B
GLN
275
n
28
GLN
275
B
n
29
276
B
n
30
277
B
n
31
278
B
GLY
279
n
32
GLY
279
B
GLU
280
n
33
GLU
280
B
VAL
281
n
34
VAL
281
B
TRP
282
n
35
TRP
282
B
MET
283
n
36
MET
283
B
GLY
284
n
37
GLY
284
B
THR
285
n
38
THR
285
B
TRP
286
n
39
TRP
286
B
ASN
287
n
40
ASN
287
B
GLY
288
n
41
GLY
288
B
THR
289
n
42
THR
289
B
THR
290
n
43
THR
290
B
ARG
291
n
44
ARG
291
B
VAL
292
n
45
VAL
292
B
ALA
293
n
46
ALA
293
B
ILE
294
n
47
ILE
294
B
LYS
295
n
48
LYS
295
B
THR
296
n
49
THR
296
B
LEU
297
n
50
LEU
297
B
LYS
298
n
51
LYS
298
B
PRO
299
n
52
PRO
299
B
n
53
300
B
n
54
301
B
n
55
302
B
SER
303
n
56
SER
303
B
PRO
304
n
57
PRO
304
B
GLU
305
n
58
GLU
305
B
ALA
306
n
59
ALA
306
B
PHE
307
n
60
PHE
307
B
LEU
308
n
61
LEU
308
B
GLN
309
n
62
GLN
309
B
GLU
310
n
63
GLU
310
B
ALA
311
n
64
ALA
311
B
GLN
312
n
65
GLN
312
B
VAL
313
n
66
VAL
313
B
MET
314
n
67
MET
314
B
LYS
315
n
68
LYS
315
B
LYS
316
n
69
LYS
316
B
LEU
317
n
70
LEU
317
B
ARG
318
n
71
ARG
318
B
HIS
319
n
72
HIS
319
B
GLU
320
n
73
GLU
320
B
LYS
321
n
74
LYS
321
B
LEU
322
n
75
LEU
322
B
VAL
323
n
76
VAL
323
B
GLN
324
n
77
GLN
324
B
LEU
325
n
78
LEU
325
B
TYR
326
n
79
TYR
326
B
ALA
327
n
80
ALA
327
B
VAL
328
n
81
VAL
328
B
VAL
329
n
82
VAL
329
B
SER
330
n
83
SER
330
B
GLU
331
n
84
GLU
331
B
GLU
332
n
85
GLU
332
B
PRO
333
n
86
PRO
333
B
ILE
334
n
87
ILE
334
B
TYR
335
n
88
TYR
335
B
ILE
336
n
89
ILE
336
B
VAL
337
n
90
VAL
337
B
THR
338
n
91
THR
338
B
GLU
339
n
92
GLU
339
B
TYR
340
n
93
TYR
340
B
MET
341
n
94
MET
341
B
SER
342
n
95
SER
342
B
LYS
343
n
96
LYS
343
B
GLY
344
n
97
GLY
344
B
CYS
345
n
98
CYS
345
B
LEU
346
n
99
LEU
346
B
LEU
347
n
100
LEU
347
B
ASP
348
n
101
ASP
348
B
PHE
349
n
102
PHE
349
B
LEU
350
n
103
LEU
350
B
LYS
351
n
104
LYS
351
B
GLY
352
n
105
GLY
352
B
GLU
353
n
106
GLU
353
B
MET
354
n
107
MET
354
B
GLY
355
n
108
GLY
355
B
LYS
356
n
109
LYS
356
B
TYR
357
n
110
TYR
357
B
LEU
358
n
111
LEU
358
B
ARG
359
n
112
ARG
359
B
LEU
360
n
113
LEU
360
B
PRO
361
n
114
PRO
361
B
GLN
362
n
115
GLN
362
B
LEU
363
n
116
LEU
363
B
VAL
364
n
117
VAL
364
B
ASP
365
n
118
ASP
365
B
MET
366
n
119
MET
366
B
ALA
367
n
120
ALA
367
B
ALA
368
n
121
ALA
368
B
GLN
369
n
122
GLN
369
B
ILE
370
n
123
ILE
370
B
ALA
371
n
124
ALA
371
B
SER
372
n
125
SER
372
B
GLY
373
n
126
GLY
373
B
MET
374
n
127
MET
374
B
ALA
375
n
128
ALA
375
B
TYR
376
n
129
TYR
376
B
VAL
377
n
130
VAL
377
B
GLU
378
n
131
GLU
378
B
ARG
379
n
132
ARG
379
B
MET
380
n
133
MET
380
B
ASN
381
n
134
ASN
381
B
TYR
382
n
135
TYR
382
B
VAL
383
n
136
VAL
383
B
HIS
384
n
137
HIS
384
B
ARG
385
n
138
ARG
385
B
ASP
386
n
139
ASP
386
B
LEU
387
n
140
LEU
387
B
ARG
388
n
141
ARG
388
B
ALA
389
n
142
ALA
389
B
ALA
390
n
143
ALA
390
B
ASN
391
n
144
ASN
391
B
ILE
392
n
145
ILE
392
B
LEU
393
n
146
LEU
393
B
VAL
394
n
147
VAL
394
B
GLY
395
n
148
GLY
395
B
GLU
396
n
149
GLU
396
B
ASN
397
n
150
ASN
397
B
LEU
398
n
151
LEU
398
B
VAL
399
n
152
VAL
399
B
CYS
400
n
153
CYS
400
B
LYS
401
n
154
LYS
401
B
VAL
402
n
155
VAL
402
B
ALA
403
n
156
ALA
403
B
ASP
404
n
157
ASP
404
B
PHE
405
n
158
PHE
405
B
GLY
406
n
159
GLY
406
B
LEU
407
n
160
LEU
407
B
ALA
408
n
161
ALA
408
B
ARG
409
n
162
ARG
409
B
LEU
410
n
163
LEU
410
B
n
164
411
B
n
165
412
B
n
166
413
B
n
167
414
B
n
168
415
B
n
169
416
B
n
170
417
B
n
171
418
B
n
172
419
B
n
173
420
B
n
174
421
B
n
175
422
B
n
176
423
B
PHE
424
n
177
PHE
424
B
PRO
425
n
178
PRO
425
B
ILE
426
n
179
ILE
426
B
LYS
427
n
180
LYS
427
B
TRP
428
n
181
TRP
428
B
THR
429
n
182
THR
429
B
ALA
430
n
183
ALA
430
B
PRO
431
n
184
PRO
431
B
GLU
432
n
185
GLU
432
B
ALA
433
n
186
ALA
433
B
ALA
434
n
187
ALA
434
B
LEU
435
n
188
LEU
435
B
TYR
436
n
189
TYR
436
B
GLY
437
n
190
GLY
437
B
ARG
438
n
191
ARG
438
B
PHE
439
n
192
PHE
439
B
THR
440
n
193
THR
440
B
ILE
441
n
194
ILE
441
B
LYS
442
n
195
LYS
442
B
SER
443
n
196
SER
443
B
ASP
444
n
197
ASP
444
B
VAL
445
n
198
VAL
445
B
TRP
446
n
199
TRP
446
B
SER
447
n
200
SER
447
B
PHE
448
n
201
PHE
448
B
GLY
449
n
202
GLY
449
B
ILE
450
n
203
ILE
450
B
LEU
451
n
204
LEU
451
B
LEU
452
n
205
LEU
452
B
THR
453
n
206
THR
453
B
GLU
454
n
207
GLU
454
B
LEU
455
n
208
LEU
455
B
THR
456
n
209
THR
456
B
THR
457
n
210
THR
457
B
LYS
458
n
211
LYS
458
B
GLY
459
n
212
GLY
459
B
ARG
460
n
213
ARG
460
B
VAL
461
n
214
VAL
461
B
PRO
462
n
215
PRO
462
B
TYR
463
n
216
TYR
463
B
PRO
464
n
217
PRO
464
B
GLY
465
n
218
GLY
465
B
MET
466
n
219
MET
466
B
VAL
467
n
220
VAL
467
B
ASN
468
n
221
ASN
468
B
ARG
469
n
222
ARG
469
B
GLU
470
n
223
GLU
470
B
VAL
471
n
224
VAL
471
B
LEU
472
n
225
LEU
472
B
ASP
473
n
226
ASP
473
B
GLN
474
n
227
GLN
474
B
VAL
475
n
228
VAL
475
B
GLU
476
n
229
GLU
476
B
ARG
477
n
230
ARG
477
B
GLY
478
n
231
GLY
478
B
TYR
479
n
232
TYR
479
B
ARG
480
n
233
ARG
480
B
MET
481
n
234
MET
481
B
PRO
482
n
235
PRO
482
B
CYS
483
n
236
CYS
483
B
PRO
484
n
237
PRO
484
B
PRO
485
n
238
PRO
485
B
GLU
486
n
239
GLU
486
B
CYS
487
n
240
CYS
487
B
PRO
488
n
241
PRO
488
B
GLU
489
n
242
GLU
489
B
SER
490
n
243
SER
490
B
LEU
491
n
244
LEU
491
B
HIS
492
n
245
HIS
492
B
ASP
493
n
246
ASP
493
B
LEU
494
n
247
LEU
494
B
MET
495
n
248
MET
495
B
CYS
496
n
249
CYS
496
B
GLN
497
n
250
GLN
497
B
CYS
498
n
251
CYS
498
B
TRP
499
n
252
TRP
499
B
ARG
500
n
253
ARG
500
B
LYS
501
n
254
LYS
501
B
ASP
502
n
255
ASP
502
B
PRO
503
n
256
PRO
503
B
GLU
504
n
257
GLU
504
B
GLU
505
n
258
GLU
505
B
ARG
506
n
259
ARG
506
B
PRO
507
n
260
PRO
507
B
THR
508
n
261
THR
508
B
PHE
509
n
262
PHE
509
B
GLU
510
n
263
GLU
510
B
TYR
511
n
264
TYR
511
B
LEU
512
n
265
LEU
512
B
GLN
513
n
266
GLN
513
B
ALA
514
n
267
ALA
514
B
PHE
515
n
268
PHE
515
B
LEU
516
n
269
LEU
516
B
GLU
517
n
270
GLU
517
B
ASP
518
n
271
ASP
518
B
TYR
519
n
272
TYR
519
B
PHE
520
n
273
PHE
520
B
THR
521
n
274
THR
521
B
SER
522
n
275
SER
522
B
THR
523
n
276
THR
523
B
GLU
524
n
277
GLU
524
B
PRO
525
n
278
PRO
525
B
GLN
526
n
279
GLN
526
B
TYR
527
n
280
TYR
527
B
GLN
528
n
281
GLN
528
B
PRO
529
n
282
PRO
529
B
GLY
530
n
283
GLY
530
B
GLU
531
n
284
GLU
531
B
ASN
532
n
285
ASN
532
B
LEU
533
n
286
LEU
533
B
author_and_software_defined_assembly
PISA
1
monomeric
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LEU
273
A
N
LEU
26
A
O
VAL
281
A
O
VAL
34
A
N
GLY
284
A
N
GLY
37
A
O
VAL
292
A
O
VAL
45
A
N
LYS
295
A
N
LYS
48
A
O
ILE
336
A
O
ILE
89
A
O
VAL
337
A
O
VAL
90
A
N
TYR
326
A
N
TYR
79
A
N
GLY
344
A
N
GLY
97
A
O
VAL
394
A
O
VAL
147
A
N
LEU
393
A
N
LEU
146
A
O
LYS
401
A
O
LYS
154
B
N
VAL
271
B
N
VAL
24
B
O
MET
283
B
O
MET
36
B
N
TRP
286
B
N
TRP
39
B
O
THR
290
B
O
THR
43
B
N
LYS
295
B
N
LYS
48
B
O
ILE
336
B
O
ILE
89
B
O
VAL
337
B
O
VAL
90
B
N
TYR
326
B
N
TYR
79
B
N
LEU
393
B
N
LEU
146
B
O
LYS
401
B
O
LYS
154
1
A
CG
PHE
424
A
CG
PHE
177
1
Y
1
A
CD1
PHE
424
A
CD1
PHE
177
1
Y
1
A
CD2
PHE
424
A
CD2
PHE
177
1
Y
1
A
CE1
PHE
424
A
CE1
PHE
177
1
Y
1
A
CE2
PHE
424
A
CE2
PHE
177
1
Y
1
A
CZ
PHE
424
A
CZ
PHE
177
1
Y
1
A
GLY
248
A
GLY
1
1
Y
1
A
HIS
249
A
HIS
2
1
Y
1
A
MET
250
A
MET
3
1
Y
1
A
GLN
251
A
GLN
4
1
Y
1
A
THR
252
A
THR
5
1
Y
1
A
GLN
253
A
GLN
6
1
Y
1
A
GLY
254
A
GLY
7
1
Y
1
A
LEU
255
A
LEU
8
1
Y
1
A
ALA
256
A
ALA
9
1
Y
1
A
ALA
408
A
ALA
161
1
Y
1
A
ARG
409
A
ARG
162
1
Y
1
A
LEU
410
A
LEU
163
1
Y
1
A
ILE
411
A
ILE
164
1
Y
1
A
GLU
412
A
GLU
165
1
Y
1
A
ASP
413
A
ASP
166
1
Y
1
A
ASN
414
A
ASN
167
1
Y
1
A
GLU
415
A
GLU
168
1
Y
1
A
TYR
416
A
TYR
169
1
Y
1
A
THR
417
A
THR
170
1
Y
1
A
ALA
418
A
ALA
171
1
Y
1
A
ARG
419
A
ARG
172
1
Y
1
A
GLN
420
A
GLN
173
1
Y
1
A
GLY
421
A
GLY
174
1
Y
1
A
ALA
422
A
ALA
175
1
Y
1
A
LYS
423
A
LYS
176
1
Y
1
B
GLY
248
B
GLY
1
1
Y
1
B
HIS
249
B
HIS
2
1
Y
1
B
MET
250
B
MET
3
1
Y
1
B
GLN
251
B
GLN
4
1
Y
1
B
THR
252
B
THR
5
1
Y
1
B
GLN
253
B
GLN
6
1
Y
1
B
GLY
254
B
GLY
7
1
Y
1
B
LEU
255
B
LEU
8
1
Y
1
B
GLY
276
B
GLY
29
1
Y
1
B
CYS
277
B
CYS
30
1
Y
1
B
PHE
278
B
PHE
31
1
Y
1
B
GLY
300
B
GLY
53
1
Y
1
B
THR
301
B
THR
54
1
Y
1
B
MET
302
B
MET
55
1
Y
1
B
ILE
411
B
ILE
164
1
Y
1
B
GLU
412
B
GLU
165
1
Y
1
B
ASP
413
B
ASP
166
1
Y
1
B
ASN
414
B
ASN
167
1
Y
1
B
GLU
415
B
GLU
168
1
Y
1
B
TYR
416
B
TYR
169
1
Y
1
B
THR
417
B
THR
170
1
Y
1
B
ALA
418
B
ALA
171
1
Y
1
B
ARG
419
B
ARG
172
1
Y
1
B
GLN
420
B
GLN
173
1
Y
1
B
GLY
421
B
GLY
174
1
Y
1
B
ALA
422
B
ALA
175
1
Y
1
B
LYS
423
B
LYS
176
1
Y
1
B
B
O
CZ
THR
PHE
296
307
1.72
1
A
A
OE1
O
GLN
HOH
526
128
2.01
1
15.15
2.30
115.30
130.45
A
A
A
CA
CB
CG
LEU
LEU
LEU
350
350
350
N
1
A
A
CB
SG
CYS
CYS
487
487
-0.113
0.016
1.812
1.699
N
1
A
ASP
258
-119.78
-160.87
1
A
ASN
287
47.67
-125.77
1
A
GLU
353
-38.36
-32.96
1
A
ARG
385
89.72
-16.44
1
A
ASP
386
-148.82
35.28
1
A
PRO
425
-98.86
50.01
1
A
TYR
463
39.36
65.66
1
A
GLU
486
66.07
-0.08
1
B
LEU
297
-127.66
-150.58
1
B
LYS
298
-99.25
-75.74
1
B
ARG
385
82.74
-14.08
1
B
ASP
386
-144.40
37.12
1
B
ASP
404
64.08
66.77
1
B
GLU
486
74.90
-1.96
12.399
0.750
-0.080
0.480
-1.580
0.090
0.790
0.869
0.840
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.295
0.244
0.246
2.500
36.710
872
26267
24908
3.500
100.000
0.298
0.239
0.762
0.222
0.496
0.318
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.500
0.318
PDB ENTRY 2OIQ
MAXIMUM LIKELIHOOD
2.500
36.710
98
4347
60
0
4189
0.018
1.738
6.595
36.684
19.389
16.137
0.112
0.006
0.229
0.316
0.199
0.261
0.257
0.316
0.260
2.565
66
1827
100.00
41.374
2.500
40.0
3F3T
26267
24911
-3.00
0.061
1
17.03
94.800
0.233
2.50
2.75
6.7
25188
6327
97.00
0.117
2.75
3.14
11.6
25039
6311
97.40
0.070
3.14
3.62
16.1
16466
4307
93.00
0.051
3.62
4.42
22.9
11389
3295
85.10
0.034
4.42
6.20
31.9
11440
2981
98.00
0.031
6.20
8.00
36.3
3493
903
98.40
0.026
8.00
12.00
44.7
2179
559
98.20
0.024
12.00
16.00
49.3
511
133
97.10
0.023
16.00
47.0
356
95
94.10
data scaling
Wolfgang Kabsch
http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html
XSCALE
package
phasing
Randy J. Read
cimr-phaser@lists.cam.ac.uk
http://www-structmed.cimr.cam.ac.uk/phaser/
PHASER
program
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
data extraction
PDB
help@deposit.rcsb.org
June 11, 2008
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.006
data scaling
XDS
Kinase domain of cSrc in complex with inhibitor RL38 (Type III)
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
A
PRO
263
A
PRO
16
HELX_P
A
GLU
265
A
GLU
18
5
1
3
A
SER
303
A
SER
56
HELX_P
A
LEU
308
A
LEU
61
1
2
6
A
LEU
308
A
LEU
61
HELX_P
A
LYS
315
A
LYS
68
1
3
8
A
LEU
346
A
LEU
99
HELX_P
A
GLY
352
A
GLY
105
1
4
7
A
MET
354
A
MET
107
HELX_P
A
LEU
358
A
LEU
111
5
5
5
A
ARG
359
A
ARG
112
HELX_P
A
ASN
381
A
ASN
134
1
6
23
A
ARG
388
A
ARG
141
HELX_P
A
ALA
390
A
ALA
143
5
7
3
A
GLU
396
A
GLU
149
HELX_P
A
LEU
398
A
LEU
151
5
8
3
A
PRO
425
A
PRO
178
HELX_P
A
THR
429
A
THR
182
5
9
5
A
ALA
430
A
ALA
183
HELX_P
A
GLY
437
A
GLY
190
1
10
8
A
THR
440
A
THR
193
HELX_P
A
THR
457
A
THR
210
1
11
18
A
VAL
467
A
VAL
220
HELX_P
A
ARG
477
A
ARG
230
1
12
11
A
PRO
488
A
PRO
241
HELX_P
A
TRP
499
A
TRP
252
1
13
12
A
ASP
502
A
ASP
255
HELX_P
A
ARG
506
A
ARG
259
5
14
5
A
THR
508
A
THR
261
HELX_P
A
ASP
518
A
ASP
271
1
15
11
A
ASP
518
A
ASP
271
HELX_P
A
THR
523
A
THR
276
1
16
6
B
PHE
307
B
PHE
60
HELX_P
B
LYS
316
B
LYS
69
1
17
10
B
CYS
345
B
CYS
98
HELX_P
B
GLY
352
B
GLY
105
1
18
8
B
MET
354
B
MET
107
HELX_P
B
LEU
358
B
LEU
111
5
19
5
B
ARG
359
B
ARG
112
HELX_P
B
MET
380
B
MET
133
1
20
22
B
ARG
388
B
ARG
141
HELX_P
B
ALA
390
B
ALA
143
5
21
3
B
GLU
396
B
GLU
149
HELX_P
B
LEU
398
B
LEU
151
5
22
3
B
ALA
430
B
ALA
183
HELX_P
B
GLY
437
B
GLY
190
1
23
8
B
THR
440
B
THR
193
HELX_P
B
THR
457
B
THR
210
1
24
18
B
VAL
467
B
VAL
220
HELX_P
B
ARG
477
B
ARG
230
1
25
11
B
PRO
488
B
PRO
241
HELX_P
B
TRP
499
B
TRP
252
1
26
12
B
ASP
502
B
ASP
255
HELX_P
B
ARG
506
B
ARG
259
5
27
5
B
THR
508
B
THR
261
HELX_P
B
ASP
518
B
ASP
271
1
28
11
B
ASP
518
B
ASP
271
HELX_P
B
THR
523
B
THR
276
1
29
6
TRANSFERASE
Allosteric, Type III, DFG-out, Alternative splicing, ATP-binding, Kinase, Lipoprotein, Myristate, Nucleotide-binding, Phosphoprotein, Proto-oncogene, SH2 domain, SH3 domain, Transferase, Tyrosine-protein kinase
A
GLU
332
A
GLU
85
1
A
PRO
333
A
PRO
86
-6.37
B
ASN
287
B
ASN
40
1
B
GLY
288
B
GLY
41
-4.94
B
SER
303
B
SER
56
1
B
PRO
304
B
PRO
57
-0.30
B
GLU
332
B
GLU
85
1
B
PRO
333
B
PRO
86
-5.66
SRC_CHICK
UNP
1
251
P00523
QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS
EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL
IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES
LHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGENL
251
533
3F3T
251
533
P00523
A
1
4
286
251
533
3F3T
251
533
P00523
B
1
4
286
1
expression tag
GLY
248
3F3T
A
P00523
UNP
1
1
expression tag
HIS
249
3F3T
A
P00523
UNP
2
1
expression tag
MET
250
3F3T
A
P00523
UNP
3
1
SER
engineered mutation
CYS
345
3F3T
A
P00523
UNP
345
98
2
expression tag
GLY
248
3F3T
B
P00523
UNP
1
2
expression tag
HIS
249
3F3T
B
P00523
UNP
2
2
expression tag
MET
250
3F3T
B
P00523
UNP
3
2
SER
engineered mutation
CYS
345
3F3T
B
P00523
UNP
345
98
5
3
5
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LEU
267
A
LEU
20
A
GLY
276
A
GLY
29
A
GLY
279
A
GLY
32
A
TRP
286
A
TRP
39
A
THR
290
A
THR
43
A
THR
296
A
THR
49
A
TYR
335
A
TYR
88
A
GLU
339
A
GLU
92
A
LEU
325
A
LEU
78
A
VAL
329
A
VAL
82
A
GLY
344
A
GLY
97
A
CYS
345
A
CYS
98
A
ILE
392
A
ILE
145
A
VAL
394
A
VAL
147
A
CYS
400
A
CYS
153
A
VAL
402
A
VAL
155
B
LEU
269
B
LEU
22
B
LYS
272
B
LYS
25
B
VAL
281
B
VAL
34
B
TRP
286
B
TRP
39
B
THR
290
B
THR
43
B
LYS
295
B
LYS
48
B
TYR
335
B
TYR
88
B
GLU
339
B
GLU
92
B
LEU
325
B
LEU
78
B
VAL
329
B
VAL
82
B
ILE
392
B
ILE
145
B
VAL
394
B
VAL
147
B
CYS
400
B
CYS
153
B
VAL
402
B
VAL
155
BINDING SITE FOR RESIDUE 1AU A 1
A
1AU
1
Software
12
BINDING SITE FOR RESIDUE 1AU A 534
A
1AU
534
Software
12
A
HOH
64
E
HOH
12
1_555
A
HOH
132
E
HOH
12
1_555
A
LYS
295
A
LYS
48
12
1_555
A
GLU
310
A
GLU
63
12
1_555
A
MET
314
A
MET
67
12
1_555
A
LEU
322
A
LEU
75
12
1_555
A
ILE
336
A
ILE
89
12
1_555
A
THR
338
A
THR
91
12
1_555
A
TYR
382
A
TYR
135
12
1_555
A
VAL
402
A
VAL
155
12
1_555
A
ASP
404
A
ASP
157
12
1_555
A
PHE
405
A
PHE
158
12
1_555
A
LEU
273
A
LEU
26
12
1_555
A
GLY
274
A
GLY
27
12
1_555
A
GLY
276
A
GLY
29
12
1_555
A
VAL
281
A
VAL
34
12
1_555
A
TYR
340
A
TYR
93
12
1_555
A
MET
341
A
MET
94
12
1_555
A
SER
342
A
SER
95
12
1_555
A
GLY
344
A
GLY
97
12
1_555
A
CYS
345
A
CYS
98
12
1_555
A
ASP
348
A
ASP
101
12
1_555
A
ALA
390
A
ALA
143
12
1_555
A
PHE
405
A
PHE
158
12
1_555
1
P 1