0.009400
0.000000
0.000000
0.000000
0.009400
0.000000
0.000000
0.000000
0.018663
0.00000
0.00000
0.00000
Kim, Y.
Li, H.
Bearden, J.
Joachimiak, A.
Midwest Center for Structural Genomics (MCSG)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
106.385
106.385
53.581
C2 H4 O2
60.052
ACETIC ACID
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C2 H6 O2
62.068
1,2-ETHANEDIOL
ETHYLENE GLYCOL
non-polymer
C H2 O2
46.025
FORMIC ACID
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be Published
0353
Crystal Structure of Putative Dienelactone Hydrolase from Klebsiella pneumoniae subsp. pneumoniae MGH 78578
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
mirrors
CCD
2008-10-05
SBC-3
double crystal monochromator
SINGLE WAVELENGTH
M
x-ray
1
0.9792
1.0
19-BM
APS
0.9792
SYNCHROTRON
APS BEAMLINE 19-BM
26833.744
Putative dienelactone hydrolase
3.1.1.-
residues 28-265
1
man
polymer
62.068
1,2-ETHANEDIOL
1
syn
non-polymer
46.025
FORMIC ACID
2
syn
non-polymer
60.052
ACETIC ACID
1
syn
non-polymer
18.015
water
295
nat
water
no
yes
SNAIIAGETSIPSQGEN(MSE)PAYHARPKNADGPLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPELYFRQGDPNE
YHDIPTLFKELVSKVPDAQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAHNPQLKAAVAWYGKLVGEKSLN
SPKHPVDIAVDLNAPVLGLYGAKDASIPQDTVET(MSE)RQALRAANATAEIVVYPEADHAFNADYRASYHEESAKDGWQ
R(MSE)LAWFAQY
SNAIIAGETSIPSQGENMPAYHARPKNADGPLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPELYFRQGDPNEYHDI
PTLFKELVSKVPDAQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAHNPQLKAAVAWYGKLVGEKSLNSPKH
PVDIAVDLNAPVLGLYGAKDASIPQDTVETMRQALRAANATAEIVVYPEADHAFNADYRASYHEESAKDGWQRMLAWFAQ
Y
A
APC60631.1
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
N-terminal fusion of maltose-binding protein (removed in situ) and N-terminal His-tag which is removed during the purification
ATCC 700721; MGH 78578
sample
KPN78578_42700, KPN_04326, ysgA
272620
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
562
Escherichia coli
BL21 magic
plasmid
pMCSG19
1
2.82
56.46
VAPOR DIFFUSION, SITTING DROP
7.0
0.2M Li2SO4 0.1 M Tris pH 7.0 1.0 M K/Na tartrate, VAPOR DIFFUSION, SITTING DROP, temperature 289K
289
Midwest Center for Structural Genomics
MCSG
PSI, Protein Structure Initiative
repository
Initial release
Advisory
Refinement description
Version format compliance
1
0
2008-11-25
1
1
2011-07-13
Y
RCSB
Y
RCSB
2008-11-05
REL
REL
EDO
1,2-ETHANEDIOL
FMT
FORMIC ACID
ACY
ACETIC ACID
HOH
water
EDO
1
2
EDO
EDO
239
A
FMT
2
3
FMT
FMT
240
A
FMT
3
3
FMT
FMT
241
A
ACY
4
4
ACY
ACY
242
A
HOH
243
5
HOH
HOH
243
A
HOH
244
5
HOH
HOH
244
A
HOH
245
5
HOH
HOH
245
A
HOH
246
5
HOH
HOH
246
A
HOH
247
5
HOH
HOH
247
A
HOH
248
5
HOH
HOH
248
A
HOH
249
5
HOH
HOH
249
A
HOH
250
5
HOH
HOH
250
A
HOH
251
5
HOH
HOH
251
A
HOH
252
5
HOH
HOH
252
A
HOH
253
5
HOH
HOH
253
A
HOH
254
5
HOH
HOH
254
A
HOH
255
5
HOH
HOH
255
A
HOH
256
5
HOH
HOH
256
A
HOH
257
5
HOH
HOH
257
A
HOH
258
5
HOH
HOH
258
A
HOH
259
5
HOH
HOH
259
A
HOH
260
5
HOH
HOH
260
A
HOH
261
5
HOH
HOH
261
A
HOH
262
5
HOH
HOH
262
A
HOH
263
5
HOH
HOH
263
A
HOH
264
5
HOH
HOH
264
A
HOH
265
5
HOH
HOH
265
A
HOH
266
5
HOH
HOH
266
A
HOH
267
5
HOH
HOH
267
A
HOH
268
5
HOH
HOH
268
A
HOH
269
5
HOH
HOH
269
A
HOH
270
5
HOH
HOH
270
A
HOH
271
5
HOH
HOH
271
A
HOH
272
5
HOH
HOH
272
A
HOH
273
5
HOH
HOH
273
A
HOH
274
5
HOH
HOH
274
A
HOH
275
5
HOH
HOH
275
A
HOH
276
5
HOH
HOH
276
A
HOH
277
5
HOH
HOH
277
A
HOH
278
5
HOH
HOH
278
A
HOH
279
5
HOH
HOH
279
A
HOH
280
5
HOH
HOH
280
A
HOH
281
5
HOH
HOH
281
A
HOH
282
5
HOH
HOH
282
A
HOH
283
5
HOH
HOH
283
A
HOH
284
5
HOH
HOH
284
A
HOH
285
5
HOH
HOH
285
A
HOH
286
5
HOH
HOH
286
A
HOH
287
5
HOH
HOH
287
A
HOH
288
5
HOH
HOH
288
A
HOH
289
5
HOH
HOH
289
A
HOH
290
5
HOH
HOH
290
A
HOH
291
5
HOH
HOH
291
A
HOH
292
5
HOH
HOH
292
A
HOH
293
5
HOH
HOH
293
A
HOH
294
5
HOH
HOH
294
A
HOH
295
5
HOH
HOH
295
A
HOH
1
5
HOH
HOH
296
A
HOH
2
5
HOH
HOH
297
A
HOH
3
5
HOH
HOH
298
A
HOH
4
5
HOH
HOH
299
A
HOH
5
5
HOH
HOH
300
A
HOH
6
5
HOH
HOH
301
A
HOH
7
5
HOH
HOH
302
A
HOH
8
5
HOH
HOH
303
A
HOH
9
5
HOH
HOH
304
A
HOH
10
5
HOH
HOH
305
A
HOH
11
5
HOH
HOH
306
A
HOH
12
5
HOH
HOH
307
A
HOH
13
5
HOH
HOH
308
A
HOH
14
5
HOH
HOH
309
A
HOH
15
5
HOH
HOH
310
A
HOH
16
5
HOH
HOH
311
A
HOH
17
5
HOH
HOH
312
A
HOH
18
5
HOH
HOH
313
A
HOH
19
5
HOH
HOH
314
A
HOH
20
5
HOH
HOH
315
A
HOH
21
5
HOH
HOH
316
A
HOH
22
5
HOH
HOH
317
A
HOH
23
5
HOH
HOH
318
A
HOH
24
5
HOH
HOH
319
A
HOH
25
5
HOH
HOH
320
A
HOH
26
5
HOH
HOH
321
A
HOH
27
5
HOH
HOH
322
A
HOH
28
5
HOH
HOH
323
A
HOH
29
5
HOH
HOH
324
A
HOH
30
5
HOH
HOH
325
A
HOH
31
5
HOH
HOH
326
A
HOH
32
5
HOH
HOH
327
A
HOH
33
5
HOH
HOH
328
A
HOH
34
5
HOH
HOH
329
A
HOH
35
5
HOH
HOH
330
A
HOH
36
5
HOH
HOH
331
A
HOH
37
5
HOH
HOH
332
A
HOH
38
5
HOH
HOH
333
A
HOH
39
5
HOH
HOH
334
A
HOH
40
5
HOH
HOH
335
A
HOH
41
5
HOH
HOH
336
A
HOH
42
5
HOH
HOH
337
A
HOH
43
5
HOH
HOH
338
A
HOH
44
5
HOH
HOH
339
A
HOH
45
5
HOH
HOH
340
A
HOH
46
5
HOH
HOH
341
A
HOH
47
5
HOH
HOH
342
A
HOH
48
5
HOH
HOH
343
A
HOH
49
5
HOH
HOH
344
A
HOH
50
5
HOH
HOH
345
A
HOH
51
5
HOH
HOH
346
A
HOH
52
5
HOH
HOH
347
A
HOH
53
5
HOH
HOH
348
A
HOH
54
5
HOH
HOH
349
A
HOH
55
5
HOH
HOH
350
A
HOH
56
5
HOH
HOH
351
A
HOH
57
5
HOH
HOH
352
A
HOH
58
5
HOH
HOH
353
A
HOH
59
5
HOH
HOH
354
A
HOH
60
5
HOH
HOH
355
A
HOH
61
5
HOH
HOH
356
A
HOH
62
5
HOH
HOH
357
A
HOH
63
5
HOH
HOH
358
A
HOH
64
5
HOH
HOH
359
A
HOH
65
5
HOH
HOH
360
A
HOH
66
5
HOH
HOH
361
A
HOH
67
5
HOH
HOH
362
A
HOH
68
5
HOH
HOH
363
A
HOH
69
5
HOH
HOH
364
A
HOH
70
5
HOH
HOH
365
A
HOH
71
5
HOH
HOH
366
A
HOH
72
5
HOH
HOH
367
A
HOH
73
5
HOH
HOH
368
A
HOH
74
5
HOH
HOH
369
A
HOH
75
5
HOH
HOH
370
A
HOH
76
5
HOH
HOH
371
A
HOH
77
5
HOH
HOH
372
A
HOH
78
5
HOH
HOH
373
A
HOH
79
5
HOH
HOH
374
A
HOH
80
5
HOH
HOH
375
A
HOH
81
5
HOH
HOH
376
A
HOH
82
5
HOH
HOH
377
A
HOH
83
5
HOH
HOH
378
A
HOH
84
5
HOH
HOH
379
A
HOH
85
5
HOH
HOH
380
A
HOH
86
5
HOH
HOH
381
A
HOH
87
5
HOH
HOH
382
A
HOH
88
5
HOH
HOH
383
A
HOH
89
5
HOH
HOH
384
A
HOH
90
5
HOH
HOH
385
A
HOH
91
5
HOH
HOH
386
A
HOH
92
5
HOH
HOH
387
A
HOH
93
5
HOH
HOH
388
A
HOH
94
5
HOH
HOH
389
A
HOH
95
5
HOH
HOH
390
A
HOH
96
5
HOH
HOH
391
A
HOH
97
5
HOH
HOH
392
A
HOH
98
5
HOH
HOH
393
A
HOH
99
5
HOH
HOH
394
A
HOH
100
5
HOH
HOH
395
A
HOH
101
5
HOH
HOH
396
A
HOH
102
5
HOH
HOH
397
A
HOH
103
5
HOH
HOH
398
A
HOH
104
5
HOH
HOH
399
A
HOH
105
5
HOH
HOH
400
A
HOH
106
5
HOH
HOH
401
A
HOH
107
5
HOH
HOH
402
A
HOH
108
5
HOH
HOH
403
A
HOH
109
5
HOH
HOH
404
A
HOH
110
5
HOH
HOH
405
A
HOH
111
5
HOH
HOH
406
A
HOH
112
5
HOH
HOH
407
A
HOH
113
5
HOH
HOH
408
A
HOH
114
5
HOH
HOH
409
A
HOH
115
5
HOH
HOH
410
A
HOH
116
5
HOH
HOH
411
A
HOH
117
5
HOH
HOH
412
A
HOH
118
5
HOH
HOH
413
A
HOH
119
5
HOH
HOH
414
A
HOH
120
5
HOH
HOH
415
A
HOH
121
5
HOH
HOH
416
A
HOH
122
5
HOH
HOH
417
A
HOH
123
5
HOH
HOH
418
A
HOH
124
5
HOH
HOH
419
A
HOH
125
5
HOH
HOH
420
A
HOH
126
5
HOH
HOH
421
A
HOH
127
5
HOH
HOH
422
A
HOH
128
5
HOH
HOH
423
A
HOH
129
5
HOH
HOH
424
A
HOH
130
5
HOH
HOH
425
A
HOH
131
5
HOH
HOH
426
A
HOH
132
5
HOH
HOH
427
A
HOH
133
5
HOH
HOH
428
A
HOH
134
5
HOH
HOH
429
A
HOH
135
5
HOH
HOH
430
A
HOH
136
5
HOH
HOH
431
A
HOH
137
5
HOH
HOH
432
A
HOH
138
5
HOH
HOH
433
A
HOH
139
5
HOH
HOH
434
A
HOH
140
5
HOH
HOH
435
A
HOH
141
5
HOH
HOH
436
A
HOH
142
5
HOH
HOH
437
A
HOH
143
5
HOH
HOH
438
A
HOH
144
5
HOH
HOH
439
A
HOH
145
5
HOH
HOH
440
A
HOH
146
5
HOH
HOH
441
A
HOH
147
5
HOH
HOH
442
A
HOH
148
5
HOH
HOH
443
A
HOH
149
5
HOH
HOH
444
A
HOH
150
5
HOH
HOH
445
A
HOH
151
5
HOH
HOH
446
A
HOH
152
5
HOH
HOH
447
A
HOH
153
5
HOH
HOH
448
A
HOH
154
5
HOH
HOH
449
A
HOH
155
5
HOH
HOH
450
A
HOH
156
5
HOH
HOH
451
A
HOH
157
5
HOH
HOH
452
A
HOH
158
5
HOH
HOH
453
A
HOH
159
5
HOH
HOH
454
A
HOH
160
5
HOH
HOH
455
A
HOH
161
5
HOH
HOH
456
A
HOH
162
5
HOH
HOH
457
A
HOH
163
5
HOH
HOH
458
A
HOH
164
5
HOH
HOH
459
A
HOH
165
5
HOH
HOH
460
A
HOH
166
5
HOH
HOH
461
A
HOH
167
5
HOH
HOH
462
A
HOH
168
5
HOH
HOH
463
A
HOH
169
5
HOH
HOH
464
A
HOH
170
5
HOH
HOH
465
A
HOH
171
5
HOH
HOH
466
A
HOH
172
5
HOH
HOH
467
A
HOH
173
5
HOH
HOH
468
A
HOH
174
5
HOH
HOH
469
A
HOH
175
5
HOH
HOH
470
A
HOH
176
5
HOH
HOH
471
A
HOH
177
5
HOH
HOH
472
A
HOH
178
5
HOH
HOH
473
A
HOH
179
5
HOH
HOH
474
A
HOH
180
5
HOH
HOH
475
A
HOH
181
5
HOH
HOH
476
A
HOH
182
5
HOH
HOH
477
A
HOH
183
5
HOH
HOH
478
A
HOH
184
5
HOH
HOH
479
A
HOH
185
5
HOH
HOH
480
A
HOH
186
5
HOH
HOH
481
A
HOH
187
5
HOH
HOH
482
A
HOH
188
5
HOH
HOH
483
A
HOH
189
5
HOH
HOH
484
A
HOH
190
5
HOH
HOH
485
A
HOH
191
5
HOH
HOH
486
A
HOH
192
5
HOH
HOH
487
A
HOH
193
5
HOH
HOH
488
A
HOH
194
5
HOH
HOH
489
A
HOH
195
5
HOH
HOH
490
A
HOH
196
5
HOH
HOH
491
A
HOH
197
5
HOH
HOH
492
A
HOH
198
5
HOH
HOH
493
A
HOH
199
5
HOH
HOH
494
A
HOH
200
5
HOH
HOH
495
A
HOH
201
5
HOH
HOH
496
A
HOH
202
5
HOH
HOH
497
A
HOH
203
5
HOH
HOH
498
A
HOH
204
5
HOH
HOH
499
A
HOH
205
5
HOH
HOH
500
A
HOH
206
5
HOH
HOH
501
A
HOH
207
5
HOH
HOH
502
A
HOH
208
5
HOH
HOH
503
A
HOH
209
5
HOH
HOH
504
A
HOH
210
5
HOH
HOH
505
A
HOH
211
5
HOH
HOH
506
A
HOH
212
5
HOH
HOH
507
A
HOH
213
5
HOH
HOH
508
A
HOH
214
5
HOH
HOH
509
A
HOH
215
5
HOH
HOH
510
A
HOH
216
5
HOH
HOH
511
A
HOH
217
5
HOH
HOH
512
A
HOH
218
5
HOH
HOH
513
A
HOH
219
5
HOH
HOH
514
A
HOH
220
5
HOH
HOH
515
A
HOH
221
5
HOH
HOH
516
A
HOH
222
5
HOH
HOH
517
A
HOH
223
5
HOH
HOH
518
A
HOH
224
5
HOH
HOH
519
A
HOH
225
5
HOH
HOH
520
A
HOH
226
5
HOH
HOH
521
A
HOH
227
5
HOH
HOH
522
A
HOH
228
5
HOH
HOH
523
A
HOH
229
5
HOH
HOH
524
A
HOH
230
5
HOH
HOH
525
A
HOH
231
5
HOH
HOH
526
A
HOH
232
5
HOH
HOH
527
A
HOH
233
5
HOH
HOH
528
A
HOH
234
5
HOH
HOH
529
A
HOH
235
5
HOH
HOH
530
A
HOH
236
5
HOH
HOH
531
A
HOH
237
5
HOH
HOH
532
A
HOH
238
5
HOH
HOH
533
A
HOH
239
5
HOH
HOH
534
A
HOH
240
5
HOH
HOH
535
A
HOH
241
5
HOH
HOH
536
A
HOH
242
5
HOH
HOH
537
A
n
1
-2
A
ASN
-1
n
2
ASN
-1
A
ALA
0
n
3
ALA
0
A
ILE
1
n
4
ILE
1
A
ILE
2
n
5
ILE
2
A
ALA
3
n
6
ALA
3
A
GLY
4
n
7
GLY
4
A
GLU
5
n
8
GLU
5
A
THR
6
n
9
THR
6
A
SER
7
n
10
SER
7
A
ILE
8
n
11
ILE
8
A
PRO
9
n
12
PRO
9
A
SER
10
n
13
SER
10
A
GLN
11
n
14
GLN
11
A
GLY
12
n
15
GLY
12
A
GLU
13
n
16
GLU
13
A
ASN
14
n
17
ASN
14
A
MSE
15
n
18
MSE
15
A
PRO
16
n
19
PRO
16
A
ALA
17
n
20
ALA
17
A
TYR
18
n
21
TYR
18
A
HIS
19
n
22
HIS
19
A
ALA
20
n
23
ALA
20
A
ARG
21
n
24
ARG
21
A
PRO
22
n
25
PRO
22
A
LYS
23
n
26
LYS
23
A
ASN
24
n
27
ASN
24
A
ALA
25
n
28
ALA
25
A
ASP
26
n
29
ASP
26
A
GLY
27
n
30
GLY
27
A
PRO
28
n
31
PRO
28
A
LEU
29
n
32
LEU
29
A
PRO
30
n
33
PRO
30
A
ILE
31
n
34
ILE
31
A
VAL
32
n
35
VAL
32
A
ILE
33
n
36
ILE
33
A
VAL
34
n
37
VAL
34
A
VAL
35
n
38
VAL
35
A
GLN
36
n
39
GLN
36
A
GLU
37
n
40
GLU
37
A
ILE
38
n
41
ILE
38
A
PHE
39
n
42
PHE
39
A
GLY
40
n
43
GLY
40
A
VAL
41
n
44
VAL
41
A
HIS
42
n
45
HIS
42
A
GLU
43
n
46
GLU
43
A
HIS
44
n
47
HIS
44
A
ILE
45
n
48
ILE
45
A
ARG
46
n
49
ARG
46
A
ASP
47
n
50
ASP
47
A
LEU
48
n
51
LEU
48
A
CYS
49
n
52
CYS
49
A
ARG
50
n
53
ARG
50
A
ARG
51
n
54
ARG
51
A
LEU
52
n
55
LEU
52
A
ALA
53
n
56
ALA
53
A
GLN
54
n
57
GLN
54
A
GLU
55
n
58
GLU
55
A
GLY
56
n
59
GLY
56
A
TYR
57
n
60
TYR
57
A
LEU
58
n
61
LEU
58
A
ALA
59
n
62
ALA
59
A
ILE
60
n
63
ILE
60
A
ALA
61
n
64
ALA
61
A
PRO
62
n
65
PRO
62
A
GLU
63
n
66
GLU
63
A
LEU
64
n
67
LEU
64
A
TYR
65
n
68
TYR
65
A
PHE
66
n
69
PHE
66
A
ARG
67
n
70
ARG
67
A
GLN
68
n
71
GLN
68
A
GLY
69
n
72
GLY
69
A
ASP
70
n
73
ASP
70
A
PRO
71
n
74
PRO
71
A
ASN
72
n
75
ASN
72
A
GLU
73
n
76
GLU
73
A
TYR
74
n
77
TYR
74
A
HIS
75
n
78
HIS
75
A
ASP
76
n
79
ASP
76
A
ILE
77
n
80
ILE
77
A
PRO
78
n
81
PRO
78
A
THR
79
n
82
THR
79
A
LEU
80
n
83
LEU
80
A
PHE
81
n
84
PHE
81
A
LYS
82
n
85
LYS
82
A
GLU
83
n
86
GLU
83
A
LEU
84
n
87
LEU
84
A
VAL
85
n
88
VAL
85
A
SER
86
n
89
SER
86
A
LYS
87
n
90
LYS
87
A
VAL
88
n
91
VAL
88
A
PRO
89
n
92
PRO
89
A
ASP
90
n
93
ASP
90
A
ALA
91
n
94
ALA
91
A
GLN
92
n
95
GLN
92
A
VAL
93
n
96
VAL
93
A
LEU
94
n
97
LEU
94
A
ALA
95
n
98
ALA
95
A
ASP
96
n
99
ASP
96
A
LEU
97
n
100
LEU
97
A
ASP
98
n
101
ASP
98
A
HIS
99
n
102
HIS
99
A
VAL
100
n
103
VAL
100
A
ALA
101
n
104
ALA
101
A
SER
102
n
105
SER
102
A
TRP
103
n
106
TRP
103
A
ALA
104
n
107
ALA
104
A
ALA
105
n
108
ALA
105
A
ARG
106
n
109
ARG
106
A
HIS
107
n
110
HIS
107
A
GLY
108
n
111
GLY
108
A
GLY
109
n
112
GLY
109
A
ASP
110
n
113
ASP
110
A
ALA
111
n
114
ALA
111
A
HIS
112
n
115
HIS
112
A
ARG
113
n
116
ARG
113
A
LEU
114
n
117
LEU
114
A
LEU
115
n
118
LEU
115
A
ILE
116
n
119
ILE
116
A
THR
117
n
120
THR
117
A
GLY
118
n
121
GLY
118
A
PHE
119
n
122
PHE
119
A
CYS
120
n
123
CYS
120
A
TRP
121
n
124
TRP
121
A
GLY
122
n
125
GLY
122
A
GLY
123
n
126
GLY
123
A
ARG
124
n
127
ARG
124
A
ILE
125
n
128
ILE
125
A
THR
126
n
129
THR
126
A
TRP
127
n
130
TRP
127
A
LEU
128
n
131
LEU
128
A
TYR
129
n
132
TYR
129
A
ALA
130
n
133
ALA
130
A
ALA
131
n
134
ALA
131
A
HIS
132
n
135
HIS
132
A
ASN
133
n
136
ASN
133
A
PRO
134
n
137
PRO
134
A
GLN
135
n
138
GLN
135
A
LEU
136
n
139
LEU
136
A
LYS
137
n
140
LYS
137
A
ALA
138
n
141
ALA
138
A
ALA
139
n
142
ALA
139
A
VAL
140
n
143
VAL
140
A
ALA
141
n
144
ALA
141
A
TRP
142
n
145
TRP
142
A
TYR
143
n
146
TYR
143
A
GLY
144
n
147
GLY
144
A
LYS
145
n
148
LYS
145
A
LEU
146
n
149
LEU
146
A
VAL
147
n
150
VAL
147
A
GLY
148
n
151
GLY
148
A
GLU
149
n
152
GLU
149
A
LYS
150
n
153
LYS
150
A
SER
151
n
154
SER
151
A
LEU
152
n
155
LEU
152
A
ASN
153
n
156
ASN
153
A
SER
154
n
157
SER
154
A
PRO
155
n
158
PRO
155
A
LYS
156
n
159
LYS
156
A
HIS
157
n
160
HIS
157
A
PRO
158
n
161
PRO
158
A
VAL
159
n
162
VAL
159
A
ASP
160
n
163
ASP
160
A
ILE
161
n
164
ILE
161
A
ALA
162
n
165
ALA
162
A
VAL
163
n
166
VAL
163
A
ASP
164
n
167
ASP
164
A
LEU
165
n
168
LEU
165
A
ASN
166
n
169
ASN
166
A
ALA
167
n
170
ALA
167
A
PRO
168
n
171
PRO
168
A
VAL
169
n
172
VAL
169
A
LEU
170
n
173
LEU
170
A
GLY
171
n
174
GLY
171
A
LEU
172
n
175
LEU
172
A
TYR
173
n
176
TYR
173
A
GLY
174
n
177
GLY
174
A
ALA
175
n
178
ALA
175
A
LYS
176
n
179
LYS
176
A
ASP
177
n
180
ASP
177
A
ALA
178
n
181
ALA
178
A
SER
179
n
182
SER
179
A
ILE
180
n
183
ILE
180
A
PRO
181
n
184
PRO
181
A
GLN
182
n
185
GLN
182
A
ASP
183
n
186
ASP
183
A
THR
184
n
187
THR
184
A
VAL
185
n
188
VAL
185
A
GLU
186
n
189
GLU
186
A
THR
187
n
190
THR
187
A
MSE
188
n
191
MSE
188
A
ARG
189
n
192
ARG
189
A
GLN
190
n
193
GLN
190
A
ALA
191
n
194
ALA
191
A
LEU
192
n
195
LEU
192
A
ARG
193
n
196
ARG
193
A
ALA
194
n
197
ALA
194
A
ALA
195
n
198
ALA
195
A
ASN
196
n
199
ASN
196
A
ALA
197
n
200
ALA
197
A
THR
198
n
201
THR
198
A
ALA
199
n
202
ALA
199
A
GLU
200
n
203
GLU
200
A
ILE
201
n
204
ILE
201
A
VAL
202
n
205
VAL
202
A
VAL
203
n
206
VAL
203
A
TYR
204
n
207
TYR
204
A
PRO
205
n
208
PRO
205
A
GLU
206
n
209
GLU
206
A
ALA
207
n
210
ALA
207
A
ASP
208
n
211
ASP
208
A
HIS
209
n
212
HIS
209
A
ALA
210
n
213
ALA
210
A
PHE
211
n
214
PHE
211
A
ASN
212
n
215
ASN
212
A
ALA
213
n
216
ALA
213
A
ASP
214
n
217
ASP
214
A
TYR
215
n
218
TYR
215
A
ARG
216
n
219
ARG
216
A
ALA
217
n
220
ALA
217
A
SER
218
n
221
SER
218
A
TYR
219
n
222
TYR
219
A
HIS
220
n
223
HIS
220
A
GLU
221
n
224
GLU
221
A
GLU
222
n
225
GLU
222
A
SER
223
n
226
SER
223
A
ALA
224
n
227
ALA
224
A
LYS
225
n
228
LYS
225
A
ASP
226
n
229
ASP
226
A
GLY
227
n
230
GLY
227
A
TRP
228
n
231
TRP
228
A
GLN
229
n
232
GLN
229
A
ARG
230
n
233
ARG
230
A
MSE
231
n
234
MSE
231
A
LEU
232
n
235
LEU
232
A
ALA
233
n
236
ALA
233
A
TRP
234
n
237
TRP
234
A
PHE
235
n
238
PHE
235
A
ALA
236
n
239
ALA
236
A
GLN
237
n
240
GLN
237
A
TYR
238
n
241
TYR
238
A
1.0828
0.1974
-0.2987
0.8433
-0.2952
0.9773
-0.0197
0.0419
0.0601
0.0439
0.0203
0.0275
-0.1122
0.0229
-0.0006
0.0264
-0.0033
-0.0067
0.0055
0.0055
0.0098
refined
53.1541
26.6225
7.8597
X-RAY DIFFRACTION
A
-1
A
238
X-RAY DIFFRACTION
1
author_and_software_defined_assembly
PISA
1
monomeric
A
MSE
15
SELENOMETHIONINE
A
MSE
18
MET
A
MSE
188
SELENOMETHIONINE
A
MSE
191
MET
A
MSE
231
SELENOMETHIONINE
A
MSE
234
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLY
4
A
N
GLY
7
A
O
HIS
19
A
O
HIS
22
A
N
TYR
18
A
N
TYR
21
A
O
ALA
61
A
O
ALA
64
A
O
ILE
60
A
O
ILE
63
A
N
VAL
34
A
N
VAL
37
A
N
VAL
35
A
N
VAL
38
A
O
THR
117
A
O
THR
120
A
N
GLY
118
A
N
GLY
121
A
O
TRP
142
A
O
TRP
145
A
N
ALA
141
A
N
ALA
144
A
O
LEU
172
A
O
LEU
175
A
N
TYR
173
A
N
TYR
176
A
O
TYR
204
A
O
TYR
207
1
A
SER
-2
A
SER
1
1
Y
1
A
A
O
O
HOH
HOH
368
478
2.07
1
A
A
OE1
O
GLU
HOH
13
502
2.09
A
1
A
A
O
O
HOH
HOH
290
291
2.10
1
3.15
0.50
120.30
123.45
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
216
216
216
N
1
A
A
CB
SG
CYS
CYS
120
120
-0.106
0.016
1.812
1.706
A
A
N
1
A
ASN
24
A
-107.45
43.46
1
A
GLU
37
-77.65
-168.87
1
A
LEU
84
-126.20
-63.87
1
A
CYS
120
A
65.34
-118.91
1
A
CYS
120
B
55.41
-114.11
1
A
TYR
143
36.21
59.38
1
A
ASN
196
A
33.38
58.28
19.911
-0.23
0.00
0.00
-0.23
0.00
0.45
0.967
0.952
0.198
0.168
0.169
0.169
1.74
47.85
1565
29596
29596
5.0
97.94
4.054
0.059
RANDOM
LIKELY RESIDUAL
1
THROUGHOUT
0.0
SAD
0.103
0.100
0.80
0.80
1.20
MAXIMUM LIKELIHOOD WITH PHASES
MASK
1.74
47.85
295
2190
14
0
1881
0.018
0.021
2142
1.547
1.935
2944
6.190
5.000
280
40.012
24.245
106
14.858
15.000
325
12.501
15.000
13
0.136
0.200
306
0.008
0.021
1748
0.877
1.500
1335
1.503
2.000
2154
2.367
3.000
807
3.719
4.500
790
0.315
0.263
1.789
105
2070
2175
20
97.32
24.19
1.74
47.85
3F67
31820
31820
0.0
0.109
1
7.6
14.0
99.8
0.866
1.74
1.78
2.4
1583
1
10.3
100
data collection
SBC-Collect
data collection
HKL-3000
phasing
HKL-3000
phasing
MLPHARE
model building
DM
phasing
SHELXD
model building
RESOLVE
model building
Coot
refinement
REFMAC
5.5.0053
data reduction
HKL-3000
data scaling
HKL-3000
phasing
DM
phasing
RESOLVE
Putative dienelactone hydrolase (E.C.3.1.1.-)
Crystal Structure of Putative Dienelactone Hydrolase from Klebsiella pneumoniae subsp. pneumoniae MGH 78578
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
5
N
N
A
HIS
42
A
HIS
45
HELX_P
A
GLU
55
A
GLU
58
1
1
14
A
ASP
70
A
ASP
73
HELX_P
A
TYR
74
A
TYR
77
5
2
5
A
ASP
76
A
ASP
79
HELX_P
A
LEU
84
A
LEU
87
1
3
9
A
VAL
85
A
VAL
88
HELX_P
A
VAL
88
A
VAL
91
5
4
4
A
PRO
89
A
PRO
92
HELX_P
A
ARG
106
A
ARG
109
1
5
18
A
CYS
120
A
CYS
123
HELX_P
A
ALA
131
A
ALA
134
1
6
12
A
HIS
157
A
HIS
160
HELX_P
A
ALA
162
A
ALA
165
1
7
6
A
VAL
163
A
VAL
166
HELX_P
A
LEU
165
A
LEU
168
5
8
3
A
PRO
181
A
PRO
184
HELX_P
A
ALA
195
A
ALA
198
1
9
15
A
HIS
220
A
HIS
223
HELX_P
A
ALA
236
A
ALA
239
1
10
17
covale
1.321
A
ASN
14
A
C
ASN
17
1_555
A
MSE
15
A
N
MSE
18
1_555
covale
1.343
A
MSE
15
A
C
MSE
18
1_555
A
PRO
16
A
N
PRO
19
1_555
covale
1.330
A
THR
187
A
C
THR
190
1_555
A
MSE
188
A
N
MSE
191
1_555
covale
1.332
A
MSE
188
A
C
MSE
191
1_555
A
ARG
189
A
N
ARG
192
1_555
covale
1.333
A
ARG
230
A
C
ARG
233
1_555
A
MSE
231
A
N
MSE
234
1_555
covale
1.336
A
MSE
231
A
C
MSE
234
1_555
A
LEU
232
A
N
LEU
235
1_555
HYDROLASE
alpha-beta-alpha sandwich, Structural Genomics, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, Hydrolase
A6TGL0_KLEP7
UNP
1
28
A6TGL0
IIAGETSIPSQGENMPAYHARPKNADGPLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPELYFRQGDPNEYHDIPTL
FKELVSKVPDAQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAHNPQLKAAVAWYGKLVGEKSLNSPKHPVD
IAVDLNAPVLGLYGAKDASIPQDTVETMRQALRAANATAEIVVYPEADHAFNADYRASYHEESAKDGWQRMLAWFAQY
28
265
3F67
1
238
A6TGL0
A
1
4
241
1
expression tag
SER
-2
3F67
A
A6TGL0
UNP
1
1
expression tag
ASN
-1
3F67
A
A6TGL0
UNP
2
1
expression tag
ALA
0
3F67
A
A6TGL0
UNP
3
8
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
A
ILE
1
A
ILE
4
A
SER
10
A
SER
13
A
GLU
13
A
GLU
16
A
PRO
22
A
PRO
25
A
LEU
58
A
LEU
61
A
PRO
62
A
PRO
65
A
LEU
29
A
LEU
32
A
VAL
35
A
VAL
38
A
GLY
109
A
GLY
112
A
PHE
119
A
PHE
122
A
ALA
138
A
ALA
141
A
TRP
142
A
TRP
145
A
VAL
169
A
VAL
172
A
GLY
174
A
GLY
177
A
ALA
199
A
ALA
202
A
TYR
204
A
TYR
207
BINDING SITE FOR RESIDUE EDO A 239
Software
6
BINDING SITE FOR RESIDUE FMT A 240
Software
3
BINDING SITE FOR RESIDUE FMT A 241
Software
4
BINDING SITE FOR RESIDUE ACY A 242
Software
7
A
GLU
5
A
GLU
8
6
1_555
A
ALA
17
A
ALA
20
6
1_555
A
TYR
18
A
TYR
21
6
1_555
A
VAL
41
A
VAL
44
6
1_555
A
ARG
46
A
ARG
49
6
1_555
A
GLU
63
A
GLU
66
6
1_555
A
GLU
55
A
GLU
58
3
1_555
A
ARG
113
A
ARG
116
3
1_555
A
HOH
365
F
HOH
3
1_555
A
VAL
203
A
VAL
206
4
1_555
A
TYR
204
A
TYR
207
4
1_555
A
PRO
205
A
PRO
208
4
1_555
A
HOH
402
F
HOH
4
1_555
A
SER
102
A
SER
105
7
1_555
A
ARG
106
A
ARG
109
7
1_555
A
HOH
249
F
HOH
7
1_555
A
HOH
258
F
HOH
7
1_555
A
HOH
259
F
HOH
7
1_555
A
HOH
286
F
HOH
7
1_555
A
HOH
287
F
HOH
7
1_555
92
P 41 21 2