0.003361
0.000000
0.000000
0.000000
0.003361
0.000000
0.000000
0.000000
0.003361
0.000000
0.000000
0.000000
Alber, T.
Mieczkowski, C.A.
TB Structural Genomics Consortium (TBSGC)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
192
90.000
90.000
90.000
297.557
297.557
297.557
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C4 H10 N O6 P
199.099
n
PHOSPHOTHREONINE
PHOSPHONOTHREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
C32 H29 N3 O5
535.590
hexyl (5S,6R,8R)-6-hydroxy-5-methyl-13-oxo-5,6,7,8-tetrahydro-13H-5,8-epoxy-4b,8a,14-triazadibenzo[b,h]cycloocta[1,2,3,4-jkl]c yclopenta[e]-as-indacene-6-carboxylate
KT5720
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
S
N
305
N
O
N
306
N
O
N
307
N
O
N
308
N
O
N
309
N
N
N
310
S
C
N
311
N
C
N
312
N
O
N
313
R
C
N
314
N
O
N
315
N
C
N
316
N
O
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
N
N
327
S
C
N
328
R
C
N
329
N
C
N
330
N
O
N
331
N
P
N
332
N
O
N
333
N
O
N
334
N
O
N
335
N
C
N
336
N
O
N
337
N
O
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
C
N
392
N
O
N
393
N
C
N
394
N
O
N
395
R
C
N
396
N
O
N
397
N
C
N
398
R
C
N
399
N
O
N
400
S
C
N
401
N
C
Y
402
N
N
Y
403
N
C
Y
404
N
C
Y
405
N
C
Y
406
N
C
Y
407
N
C
Y
408
N
C
Y
409
N
C
Y
410
N
C
Y
411
N
C
Y
412
N
N
Y
413
N
C
Y
414
N
C
Y
415
N
C
Y
416
N
C
Y
417
N
C
Y
418
N
C
Y
419
N
C
Y
420
N
C
Y
421
N
C
N
422
N
C
N
423
N
N
N
424
N
C
N
425
N
O
N
426
N
H
N
427
N
H
N
428
N
C
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
C
N
447
N
H
N
448
N
H
N
449
N
C
N
450
N
H
N
451
N
C
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
C
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
doub
N
291
N
doub
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
doub
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
doub
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
doub
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
doub
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
Y
342
N
doub
Y
343
N
sing
Y
344
N
sing
N
345
N
sing
Y
346
N
doub
N
347
N
sing
Y
348
N
doub
N
349
N
sing
Y
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
doub
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
doub
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
Y
396
N
sing
Y
397
N
sing
Y
398
N
sing
Y
399
N
doub
Y
400
N
doub
N
401
N
sing
Y
402
N
sing
N
403
N
sing
N
404
N
sing
Y
405
N
doub
N
406
N
sing
Y
407
N
sing
Y
408
N
sing
Y
409
N
doub
Y
410
N
sing
Y
411
N
doub
Y
412
N
sing
Y
413
N
sing
Y
414
N
sing
Y
415
N
sing
Y
416
N
doub
N
417
N
sing
Y
418
N
sing
Y
419
N
doub
N
420
N
sing
Y
421
N
sing
N
422
N
sing
Y
423
N
doub
N
424
N
sing
Y
425
N
sing
Y
426
N
doub
N
427
N
sing
Y
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
doub
N
432
N
sing
N
433
N
doub
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
UK
Embo J.
EMJODG
0897
0261-4189
27
3186
3197
10.1038/emboj.2008.236
19008858
Auto-activation mechanism of the Mycobacterium tuberculosis PknB receptor Ser/Thr kinase.
2008
10.2210/pdb3f69/pdb
pdb_00003f69
100
1
CCD
2007-01-25
ADSC QUANTUM 4
Si 111 channel
SINGLE WAVELENGTH
M
x-ray
1
1.11586
1.0
8.3.1
ALS
1.11586
SYNCHROTRON
ALS BEAMLINE 8.3.1
33550.484
Serine/threonine-protein kinase pknB
2.7.11.1
PknB mutant kinase domain
L33D, M145L, M155V
2
man
polymer
535.590
hexyl (5S,6R,8R)-6-hydroxy-5-methyl-13-oxo-5,6,7,8-tetrahydro-13H-5,8-epoxy-4b,8a,14-triazadibenzo[b,h]cycloocta[1,2,3,4-jkl]c yclopenta[e]-as-indacene-6-carboxylate
2
syn
non-polymer
96.063
SULFATE ION
4
syn
non-polymer
18.015
water
30
nat
water
no
yes
GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDT
GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDF
GIARAIADSGNSV(TPO)QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDP
IPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAERTSLLSSAAGNLSGPR
GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDT
GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDF
GIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS
ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAERTSLLSSAAGNLSGPR
A,B
Rv0014c
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
H37Rv
sample
MT0017, MTCY10H4.14c, pknB, Rv0014c
1773
Mycobacterium tuberculosis
562
Escherichia coli
BL21-Codon plus
plasmid
pET28b
1
4.09
69.93
VAPOR DIFFUSION, SITTING DROP
8.5
100 mM Tris pH 8.5, 25% PEG 3350, 200 mM ammonium sulfate , VAPOR DIFFUSION, SITTING DROP, temperature 277K
277
TB Structural Genomics Consortium
TBSGC
pdbx_unobs_or_zero_occ_atoms
software
chem_comp
database_2
entity
pdbx_entity_nonpoly
pdbx_unobs_or_zero_occ_atoms
struct_conn
struct_ref_seq_dif
struct_site
chem_comp_atom
chem_comp_bond
pdbx_initial_refinement_model
repository
Initial release
Advisory
Refinement description
Version format compliance
Advisory
Refinement description
Advisory
Database references
Derived calculations
Structure summary
Data collection
Refinement description
1
0
2008-12-02
1
1
2011-07-13
1
2
2017-10-25
1
3
2021-10-20
1
4
2023-12-27
1
5
2024-04-03
_chem_comp.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_entity.pdbx_description
_pdbx_entity_nonpoly.name
_struct_conn.pdbx_leaving_atom_flag
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
RCSB
Y
RCSB
2008-11-05
REL
REL
XDR
hexyl (5S,6R,8R)-6-hydroxy-5-methyl-13-oxo-5,6,7,8-tetrahydro-13H-5,8-epoxy-4b,8a,14-triazadibenzo[b,h]cycloocta[1,2,3,4-jkl]c yclopenta[e]-as-indacene-6-carboxylate
SO4
SULFATE ION
HOH
water
PknB Leu33Asp kinase domain (1-308)
Other
experimental model
DRG
1
2
XDR
XDR
309
A
SO4
1
3
SO4
SO4
310
A
SO4
2
3
SO4
SO4
311
A
DRG
1
2
XDR
XDR
309
B
SO4
1
3
SO4
SO4
310
B
SO4
1
3
SO4
SO4
311
B
HOH
1
4
HOH
HOH
312
A
HOH
1
4
HOH
HOH
313
A
HOH
1
4
HOH
HOH
314
A
HOH
2
4
HOH
HOH
315
A
HOH
1
4
HOH
HOH
316
A
HOH
1
4
HOH
HOH
317
A
HOH
13
4
HOH
HOH
318
A
HOH
5
4
HOH
HOH
319
A
HOH
6
4
HOH
HOH
320
A
HOH
11
4
HOH
HOH
321
A
HOH
12
4
HOH
HOH
322
A
HOH
7
4
HOH
HOH
323
A
HOH
17
4
HOH
HOH
324
A
HOH
18
4
HOH
HOH
325
A
HOH
19
4
HOH
HOH
326
A
HOH
20
4
HOH
HOH
327
A
HOH
3
4
HOH
HOH
332
A
HOH
4
4
HOH
HOH
312
B
HOH
3
4
HOH
HOH
314
B
HOH
8
4
HOH
HOH
318
B
HOH
9
4
HOH
HOH
319
B
HOH
10
4
HOH
HOH
320
B
HOH
14
4
HOH
HOH
323
B
HOH
3
4
HOH
HOH
328
B
HOH
5
4
HOH
HOH
329
B
HOH
6
4
HOH
HOH
330
B
HOH
7
4
HOH
HOH
331
B
HOH
4
4
HOH
HOH
333
B
HOH
5
4
HOH
HOH
334
B
HOH
6
4
HOH
HOH
335
B
2.800
2.800
41.670
41.670
Phaser MODE: MR_AUTO
n
1
-2
A
n
2
-1
A
n
3
0
A
n
4
1
A
n
5
2
A
THR
3
n
6
THR
3
A
PRO
4
n
7
PRO
4
A
SER
5
n
8
SER
5
A
HIS
6
n
9
HIS
6
A
LEU
7
n
10
LEU
7
A
SER
8
n
11
SER
8
A
ASP
9
n
12
ASP
9
A
ARG
10
n
13
ARG
10
A
TYR
11
n
14
TYR
11
A
GLU
12
n
15
GLU
12
A
LEU
13
n
16
LEU
13
A
GLY
14
n
17
GLY
14
A
GLU
15
n
18
GLU
15
A
ILE
16
n
19
ILE
16
A
LEU
17
n
20
LEU
17
A
GLY
18
n
21
GLY
18
A
PHE
19
n
22
PHE
19
A
GLY
20
n
23
GLY
20
A
GLY
21
n
24
GLY
21
A
MET
22
n
25
MET
22
A
SER
23
n
26
SER
23
A
GLU
24
n
27
GLU
24
A
VAL
25
n
28
VAL
25
A
HIS
26
n
29
HIS
26
A
LEU
27
n
30
LEU
27
A
ALA
28
n
31
ALA
28
A
ARG
29
n
32
ARG
29
A
ASP
30
n
33
ASP
30
A
LEU
31
n
34
LEU
31
A
ARG
32
n
35
ARG
32
A
ASP
33
n
36
ASP
33
A
HIS
34
n
37
HIS
34
A
ARG
35
n
38
ARG
35
A
ASP
36
n
39
ASP
36
A
VAL
37
n
40
VAL
37
A
ALA
38
n
41
ALA
38
A
VAL
39
n
42
VAL
39
A
LYS
40
n
43
LYS
40
A
VAL
41
n
44
VAL
41
A
LEU
42
n
45
LEU
42
A
ARG
43
n
46
ARG
43
A
ALA
44
n
47
ALA
44
A
ASP
45
n
48
ASP
45
A
LEU
46
n
49
LEU
46
A
ALA
47
n
50
ALA
47
A
ARG
48
n
51
ARG
48
A
ASP
49
n
52
ASP
49
A
PRO
50
n
53
PRO
50
A
SER
51
n
54
SER
51
A
PHE
52
n
55
PHE
52
A
TYR
53
n
56
TYR
53
A
LEU
54
n
57
LEU
54
A
ARG
55
n
58
ARG
55
A
PHE
56
n
59
PHE
56
A
ARG
57
n
60
ARG
57
A
ARG
58
n
61
ARG
58
A
GLU
59
n
62
GLU
59
A
ALA
60
n
63
ALA
60
A
GLN
61
n
64
GLN
61
A
ASN
62
n
65
ASN
62
A
ALA
63
n
66
ALA
63
A
ALA
64
n
67
ALA
64
A
ALA
65
n
68
ALA
65
A
LEU
66
n
69
LEU
66
A
ASN
67
n
70
ASN
67
A
HIS
68
n
71
HIS
68
A
PRO
69
n
72
PRO
69
A
ALA
70
n
73
ALA
70
A
ILE
71
n
74
ILE
71
A
VAL
72
n
75
VAL
72
A
ALA
73
n
76
ALA
73
A
VAL
74
n
77
VAL
74
A
TYR
75
n
78
TYR
75
A
ASP
76
n
79
ASP
76
A
THR
77
n
80
THR
77
A
GLY
78
n
81
GLY
78
A
GLU
79
n
82
GLU
79
A
ALA
80
n
83
ALA
80
A
GLU
81
n
84
GLU
81
A
THR
82
n
85
THR
82
A
PRO
83
n
86
PRO
83
A
ALA
84
n
87
ALA
84
A
GLY
85
n
88
GLY
85
A
PRO
86
n
89
PRO
86
A
LEU
87
n
90
LEU
87
A
PRO
88
n
91
PRO
88
A
TYR
89
n
92
TYR
89
A
ILE
90
n
93
ILE
90
A
VAL
91
n
94
VAL
91
A
MET
92
n
95
MET
92
A
GLU
93
n
96
GLU
93
A
TYR
94
n
97
TYR
94
A
VAL
95
n
98
VAL
95
A
ASP
96
n
99
ASP
96
A
GLY
97
n
100
GLY
97
A
VAL
98
n
101
VAL
98
A
THR
99
n
102
THR
99
A
LEU
100
n
103
LEU
100
A
ARG
101
n
104
ARG
101
A
ASP
102
n
105
ASP
102
A
ILE
103
n
106
ILE
103
A
VAL
104
n
107
VAL
104
A
HIS
105
n
108
HIS
105
A
THR
106
n
109
THR
106
A
GLU
107
n
110
GLU
107
A
GLY
108
n
111
GLY
108
A
PRO
109
n
112
PRO
109
A
MET
110
n
113
MET
110
A
THR
111
n
114
THR
111
A
PRO
112
n
115
PRO
112
A
LYS
113
n
116
LYS
113
A
ARG
114
n
117
ARG
114
A
ALA
115
n
118
ALA
115
A
ILE
116
n
119
ILE
116
A
GLU
117
n
120
GLU
117
A
VAL
118
n
121
VAL
118
A
ILE
119
n
122
ILE
119
A
ALA
120
n
123
ALA
120
A
ASP
121
n
124
ASP
121
A
ALA
122
n
125
ALA
122
A
CYS
123
n
126
CYS
123
A
GLN
124
n
127
GLN
124
A
ALA
125
n
128
ALA
125
A
LEU
126
n
129
LEU
126
A
ASN
127
n
130
ASN
127
A
PHE
128
n
131
PHE
128
A
SER
129
n
132
SER
129
A
HIS
130
n
133
HIS
130
A
GLN
131
n
134
GLN
131
A
ASN
132
n
135
ASN
132
A
GLY
133
n
136
GLY
133
A
ILE
134
n
137
ILE
134
A
ILE
135
n
138
ILE
135
A
HIS
136
n
139
HIS
136
A
ARG
137
n
140
ARG
137
A
ASP
138
n
141
ASP
138
A
VAL
139
n
142
VAL
139
A
LYS
140
n
143
LYS
140
A
PRO
141
n
144
PRO
141
A
ALA
142
n
145
ALA
142
A
ASN
143
n
146
ASN
143
A
ILE
144
n
147
ILE
144
A
LEU
145
n
148
LEU
145
A
ILE
146
n
149
ILE
146
A
SER
147
n
150
SER
147
A
ALA
148
n
151
ALA
148
A
THR
149
n
152
THR
149
A
ASN
150
n
153
ASN
150
A
ALA
151
n
154
ALA
151
A
VAL
152
n
155
VAL
152
A
LYS
153
n
156
LYS
153
A
VAL
154
n
157
VAL
154
A
VAL
155
n
158
VAL
155
A
ASP
156
n
159
ASP
156
A
PHE
157
n
160
PHE
157
A
GLY
158
n
161
GLY
158
A
ILE
159
n
162
ILE
159
A
ALA
160
n
163
ALA
160
A
ARG
161
n
164
ARG
161
A
ALA
162
n
165
ALA
162
A
ILE
163
n
166
ILE
163
A
n
167
164
A
n
168
165
A
n
169
166
A
n
170
167
A
n
171
168
A
n
172
169
A
n
173
170
A
n
174
171
A
n
175
172
A
n
176
173
A
n
177
174
A
n
178
175
A
n
179
176
A
n
180
177
A
n
181
178
A
THR
179
n
182
THR
179
A
ALA
180
n
183
ALA
180
A
GLN
181
n
184
GLN
181
A
TYR
182
n
185
TYR
182
A
LEU
183
n
186
LEU
183
A
SER
184
n
187
SER
184
A
PRO
185
n
188
PRO
185
A
GLU
186
n
189
GLU
186
A
GLN
187
n
190
GLN
187
A
ALA
188
n
191
ALA
188
A
ARG
189
n
192
ARG
189
A
GLY
190
n
193
GLY
190
A
ASP
191
n
194
ASP
191
A
SER
192
n
195
SER
192
A
VAL
193
n
196
VAL
193
A
ASP
194
n
197
ASP
194
A
ALA
195
n
198
ALA
195
A
ARG
196
n
199
ARG
196
A
SER
197
n
200
SER
197
A
ASP
198
n
201
ASP
198
A
VAL
199
n
202
VAL
199
A
TYR
200
n
203
TYR
200
A
SER
201
n
204
SER
201
A
LEU
202
n
205
LEU
202
A
GLY
203
n
206
GLY
203
A
CYS
204
n
207
CYS
204
A
VAL
205
n
208
VAL
205
A
LEU
206
n
209
LEU
206
A
TYR
207
n
210
TYR
207
A
GLU
208
n
211
GLU
208
A
VAL
209
n
212
VAL
209
A
LEU
210
n
213
LEU
210
A
THR
211
n
214
THR
211
A
GLY
212
n
215
GLY
212
A
GLU
213
n
216
GLU
213
A
PRO
214
n
217
PRO
214
A
PRO
215
n
218
PRO
215
A
PHE
216
n
219
PHE
216
A
THR
217
n
220
THR
217
A
GLY
218
n
221
GLY
218
A
ASP
219
n
222
ASP
219
A
SER
220
n
223
SER
220
A
PRO
221
n
224
PRO
221
A
VAL
222
n
225
VAL
222
A
SER
223
n
226
SER
223
A
VAL
224
n
227
VAL
224
A
ALA
225
n
228
ALA
225
A
TYR
226
n
229
TYR
226
A
GLN
227
n
230
GLN
227
A
HIS
228
n
231
HIS
228
A
VAL
229
n
232
VAL
229
A
ARG
230
n
233
ARG
230
A
GLU
231
n
234
GLU
231
A
ASP
232
n
235
ASP
232
A
PRO
233
n
236
PRO
233
A
ILE
234
n
237
ILE
234
A
PRO
235
n
238
PRO
235
A
PRO
236
n
239
PRO
236
A
SER
237
n
240
SER
237
A
ALA
238
n
241
ALA
238
A
ARG
239
n
242
ARG
239
A
HIS
240
n
243
HIS
240
A
GLU
241
n
244
GLU
241
A
GLY
242
n
245
GLY
242
A
LEU
243
n
246
LEU
243
A
SER
244
n
247
SER
244
A
ALA
245
n
248
ALA
245
A
ASP
246
n
249
ASP
246
A
LEU
247
n
250
LEU
247
A
ASP
248
n
251
ASP
248
A
ALA
249
n
252
ALA
249
A
VAL
250
n
253
VAL
250
A
VAL
251
n
254
VAL
251
A
LEU
252
n
255
LEU
252
A
LYS
253
n
256
LYS
253
A
ALA
254
n
257
ALA
254
A
LEU
255
n
258
LEU
255
A
ALA
256
n
259
ALA
256
A
LYS
257
n
260
LYS
257
A
ASN
258
n
261
ASN
258
A
PRO
259
n
262
PRO
259
A
GLU
260
n
263
GLU
260
A
ASN
261
n
264
ASN
261
A
ARG
262
n
265
ARG
262
A
TYR
263
n
266
TYR
263
A
GLN
264
n
267
GLN
264
A
THR
265
n
268
THR
265
A
ALA
266
n
269
ALA
266
A
ALA
267
n
270
ALA
267
A
GLU
268
n
271
GLU
268
A
MET
269
n
272
MET
269
A
ARG
270
n
273
ARG
270
A
ALA
271
n
274
ALA
271
A
ASP
272
n
275
ASP
272
A
LEU
273
n
276
LEU
273
A
VAL
274
n
277
VAL
274
A
ARG
275
n
278
ARG
275
A
VAL
276
n
279
VAL
276
A
HIS
277
n
280
HIS
277
A
ASN
278
n
281
ASN
278
A
GLY
279
n
282
GLY
279
A
GLU
280
n
283
GLU
280
A
PRO
281
n
284
PRO
281
A
PRO
282
n
285
PRO
282
A
GLU
283
n
286
GLU
283
A
ALA
284
n
287
ALA
284
A
PRO
285
n
288
PRO
285
A
LYS
286
n
289
LYS
286
A
VAL
287
n
290
VAL
287
A
n
291
288
A
n
292
289
A
n
293
290
A
n
294
291
A
n
295
292
A
n
296
293
A
n
297
294
A
n
298
295
A
n
299
296
A
n
300
297
A
n
301
298
A
n
302
299
A
n
303
300
A
n
304
301
A
n
305
302
A
n
306
303
A
n
307
304
A
n
308
305
A
n
309
306
A
n
310
307
A
n
311
308
A
n
1
-2
B
n
2
-1
B
n
3
0
B
n
4
1
B
THR
2
n
5
THR
2
B
THR
3
n
6
THR
3
B
PRO
4
n
7
PRO
4
B
SER
5
n
8
SER
5
B
HIS
6
n
9
HIS
6
B
LEU
7
n
10
LEU
7
B
SER
8
n
11
SER
8
B
ASP
9
n
12
ASP
9
B
ARG
10
n
13
ARG
10
B
TYR
11
n
14
TYR
11
B
GLU
12
n
15
GLU
12
B
LEU
13
n
16
LEU
13
B
GLY
14
n
17
GLY
14
B
GLU
15
n
18
GLU
15
B
ILE
16
n
19
ILE
16
B
LEU
17
n
20
LEU
17
B
GLY
18
n
21
GLY
18
B
PHE
19
n
22
PHE
19
B
GLY
20
n
23
GLY
20
B
GLY
21
n
24
GLY
21
B
MET
22
n
25
MET
22
B
SER
23
n
26
SER
23
B
GLU
24
n
27
GLU
24
B
VAL
25
n
28
VAL
25
B
HIS
26
n
29
HIS
26
B
LEU
27
n
30
LEU
27
B
ALA
28
n
31
ALA
28
B
ARG
29
n
32
ARG
29
B
ASP
30
n
33
ASP
30
B
LEU
31
n
34
LEU
31
B
ARG
32
n
35
ARG
32
B
ASP
33
n
36
ASP
33
B
HIS
34
n
37
HIS
34
B
ARG
35
n
38
ARG
35
B
ASP
36
n
39
ASP
36
B
VAL
37
n
40
VAL
37
B
ALA
38
n
41
ALA
38
B
VAL
39
n
42
VAL
39
B
LYS
40
n
43
LYS
40
B
VAL
41
n
44
VAL
41
B
LEU
42
n
45
LEU
42
B
ARG
43
n
46
ARG
43
B
ALA
44
n
47
ALA
44
B
ASP
45
n
48
ASP
45
B
LEU
46
n
49
LEU
46
B
ALA
47
n
50
ALA
47
B
ARG
48
n
51
ARG
48
B
ASP
49
n
52
ASP
49
B
PRO
50
n
53
PRO
50
B
SER
51
n
54
SER
51
B
PHE
52
n
55
PHE
52
B
TYR
53
n
56
TYR
53
B
LEU
54
n
57
LEU
54
B
ARG
55
n
58
ARG
55
B
PHE
56
n
59
PHE
56
B
ARG
57
n
60
ARG
57
B
ARG
58
n
61
ARG
58
B
GLU
59
n
62
GLU
59
B
ALA
60
n
63
ALA
60
B
GLN
61
n
64
GLN
61
B
ASN
62
n
65
ASN
62
B
ALA
63
n
66
ALA
63
B
ALA
64
n
67
ALA
64
B
ALA
65
n
68
ALA
65
B
LEU
66
n
69
LEU
66
B
ASN
67
n
70
ASN
67
B
HIS
68
n
71
HIS
68
B
PRO
69
n
72
PRO
69
B
ALA
70
n
73
ALA
70
B
ILE
71
n
74
ILE
71
B
VAL
72
n
75
VAL
72
B
ALA
73
n
76
ALA
73
B
VAL
74
n
77
VAL
74
B
TYR
75
n
78
TYR
75
B
ASP
76
n
79
ASP
76
B
THR
77
n
80
THR
77
B
GLY
78
n
81
GLY
78
B
GLU
79
n
82
GLU
79
B
ALA
80
n
83
ALA
80
B
GLU
81
n
84
GLU
81
B
THR
82
n
85
THR
82
B
PRO
83
n
86
PRO
83
B
ALA
84
n
87
ALA
84
B
GLY
85
n
88
GLY
85
B
PRO
86
n
89
PRO
86
B
LEU
87
n
90
LEU
87
B
PRO
88
n
91
PRO
88
B
TYR
89
n
92
TYR
89
B
ILE
90
n
93
ILE
90
B
VAL
91
n
94
VAL
91
B
MET
92
n
95
MET
92
B
GLU
93
n
96
GLU
93
B
TYR
94
n
97
TYR
94
B
VAL
95
n
98
VAL
95
B
ASP
96
n
99
ASP
96
B
GLY
97
n
100
GLY
97
B
VAL
98
n
101
VAL
98
B
THR
99
n
102
THR
99
B
LEU
100
n
103
LEU
100
B
ARG
101
n
104
ARG
101
B
ASP
102
n
105
ASP
102
B
ILE
103
n
106
ILE
103
B
VAL
104
n
107
VAL
104
B
HIS
105
n
108
HIS
105
B
THR
106
n
109
THR
106
B
GLU
107
n
110
GLU
107
B
GLY
108
n
111
GLY
108
B
PRO
109
n
112
PRO
109
B
MET
110
n
113
MET
110
B
THR
111
n
114
THR
111
B
PRO
112
n
115
PRO
112
B
LYS
113
n
116
LYS
113
B
ARG
114
n
117
ARG
114
B
ALA
115
n
118
ALA
115
B
ILE
116
n
119
ILE
116
B
GLU
117
n
120
GLU
117
B
VAL
118
n
121
VAL
118
B
ILE
119
n
122
ILE
119
B
ALA
120
n
123
ALA
120
B
ASP
121
n
124
ASP
121
B
ALA
122
n
125
ALA
122
B
CYS
123
n
126
CYS
123
B
GLN
124
n
127
GLN
124
B
ALA
125
n
128
ALA
125
B
LEU
126
n
129
LEU
126
B
ASN
127
n
130
ASN
127
B
PHE
128
n
131
PHE
128
B
SER
129
n
132
SER
129
B
HIS
130
n
133
HIS
130
B
GLN
131
n
134
GLN
131
B
ASN
132
n
135
ASN
132
B
GLY
133
n
136
GLY
133
B
ILE
134
n
137
ILE
134
B
ILE
135
n
138
ILE
135
B
HIS
136
n
139
HIS
136
B
ARG
137
n
140
ARG
137
B
ASP
138
n
141
ASP
138
B
VAL
139
n
142
VAL
139
B
LYS
140
n
143
LYS
140
B
PRO
141
n
144
PRO
141
B
ALA
142
n
145
ALA
142
B
ASN
143
n
146
ASN
143
B
ILE
144
n
147
ILE
144
B
LEU
145
n
148
LEU
145
B
ILE
146
n
149
ILE
146
B
SER
147
n
150
SER
147
B
ALA
148
n
151
ALA
148
B
THR
149
n
152
THR
149
B
ASN
150
n
153
ASN
150
B
ALA
151
n
154
ALA
151
B
VAL
152
n
155
VAL
152
B
LYS
153
n
156
LYS
153
B
VAL
154
n
157
VAL
154
B
VAL
155
n
158
VAL
155
B
ASP
156
n
159
ASP
156
B
PHE
157
n
160
PHE
157
B
GLY
158
n
161
GLY
158
B
ILE
159
n
162
ILE
159
B
ALA
160
n
163
ALA
160
B
ARG
161
n
164
ARG
161
B
ALA
162
n
165
ALA
162
B
ILE
163
n
166
ILE
163
B
ALA
164
n
167
ALA
164
B
ASP
165
n
168
ASP
165
B
SER
166
n
169
SER
166
B
GLY
167
n
170
GLY
167
B
ASN
168
n
171
ASN
168
B
SER
169
n
172
SER
169
B
VAL
170
n
173
VAL
170
B
TPO
171
n
174
TPO
171
B
GLN
172
n
175
GLN
172
B
THR
173
n
176
THR
173
B
n
177
174
B
n
178
175
B
n
179
176
B
ILE
177
n
180
ILE
177
B
GLY
178
n
181
GLY
178
B
THR
179
n
182
THR
179
B
ALA
180
n
183
ALA
180
B
GLN
181
n
184
GLN
181
B
TYR
182
n
185
TYR
182
B
LEU
183
n
186
LEU
183
B
SER
184
n
187
SER
184
B
PRO
185
n
188
PRO
185
B
GLU
186
n
189
GLU
186
B
GLN
187
n
190
GLN
187
B
ALA
188
n
191
ALA
188
B
ARG
189
n
192
ARG
189
B
GLY
190
n
193
GLY
190
B
ASP
191
n
194
ASP
191
B
SER
192
n
195
SER
192
B
VAL
193
n
196
VAL
193
B
ASP
194
n
197
ASP
194
B
ALA
195
n
198
ALA
195
B
ARG
196
n
199
ARG
196
B
SER
197
n
200
SER
197
B
ASP
198
n
201
ASP
198
B
VAL
199
n
202
VAL
199
B
TYR
200
n
203
TYR
200
B
SER
201
n
204
SER
201
B
LEU
202
n
205
LEU
202
B
GLY
203
n
206
GLY
203
B
CYS
204
n
207
CYS
204
B
VAL
205
n
208
VAL
205
B
LEU
206
n
209
LEU
206
B
TYR
207
n
210
TYR
207
B
GLU
208
n
211
GLU
208
B
VAL
209
n
212
VAL
209
B
LEU
210
n
213
LEU
210
B
THR
211
n
214
THR
211
B
GLY
212
n
215
GLY
212
B
GLU
213
n
216
GLU
213
B
PRO
214
n
217
PRO
214
B
PRO
215
n
218
PRO
215
B
PHE
216
n
219
PHE
216
B
THR
217
n
220
THR
217
B
GLY
218
n
221
GLY
218
B
ASP
219
n
222
ASP
219
B
SER
220
n
223
SER
220
B
PRO
221
n
224
PRO
221
B
VAL
222
n
225
VAL
222
B
SER
223
n
226
SER
223
B
VAL
224
n
227
VAL
224
B
ALA
225
n
228
ALA
225
B
TYR
226
n
229
TYR
226
B
GLN
227
n
230
GLN
227
B
HIS
228
n
231
HIS
228
B
VAL
229
n
232
VAL
229
B
ARG
230
n
233
ARG
230
B
GLU
231
n
234
GLU
231
B
ASP
232
n
235
ASP
232
B
PRO
233
n
236
PRO
233
B
ILE
234
n
237
ILE
234
B
PRO
235
n
238
PRO
235
B
PRO
236
n
239
PRO
236
B
SER
237
n
240
SER
237
B
ALA
238
n
241
ALA
238
B
ARG
239
n
242
ARG
239
B
HIS
240
n
243
HIS
240
B
GLU
241
n
244
GLU
241
B
GLY
242
n
245
GLY
242
B
LEU
243
n
246
LEU
243
B
SER
244
n
247
SER
244
B
ALA
245
n
248
ALA
245
B
ASP
246
n
249
ASP
246
B
LEU
247
n
250
LEU
247
B
ASP
248
n
251
ASP
248
B
ALA
249
n
252
ALA
249
B
VAL
250
n
253
VAL
250
B
VAL
251
n
254
VAL
251
B
LEU
252
n
255
LEU
252
B
LYS
253
n
256
LYS
253
B
ALA
254
n
257
ALA
254
B
LEU
255
n
258
LEU
255
B
ALA
256
n
259
ALA
256
B
LYS
257
n
260
LYS
257
B
ASN
258
n
261
ASN
258
B
PRO
259
n
262
PRO
259
B
GLU
260
n
263
GLU
260
B
ASN
261
n
264
ASN
261
B
ARG
262
n
265
ARG
262
B
TYR
263
n
266
TYR
263
B
GLN
264
n
267
GLN
264
B
THR
265
n
268
THR
265
B
ALA
266
n
269
ALA
266
B
ALA
267
n
270
ALA
267
B
GLU
268
n
271
GLU
268
B
MET
269
n
272
MET
269
B
ARG
270
n
273
ARG
270
B
ALA
271
n
274
ALA
271
B
ASP
272
n
275
ASP
272
B
LEU
273
n
276
LEU
273
B
VAL
274
n
277
VAL
274
B
ARG
275
n
278
ARG
275
B
VAL
276
n
279
VAL
276
B
HIS
277
n
280
HIS
277
B
ASN
278
n
281
ASN
278
B
GLY
279
n
282
GLY
279
B
GLU
280
n
283
GLU
280
B
PRO
281
n
284
PRO
281
B
PRO
282
n
285
PRO
282
B
GLU
283
n
286
GLU
283
B
ALA
284
n
287
ALA
284
B
PRO
285
n
288
PRO
285
B
LYS
286
n
289
LYS
286
B
VAL
287
n
290
VAL
287
B
n
291
288
B
n
292
289
B
n
293
290
B
n
294
291
B
n
295
292
B
n
296
293
B
n
297
294
B
n
298
295
B
n
299
296
B
n
300
297
B
n
301
298
B
n
302
299
B
n
303
300
B
n
304
301
B
n
305
302
B
n
306
303
B
n
307
304
B
n
308
305
B
n
309
306
B
n
310
307
B
n
311
308
B
1.8541
-0.7128
-0.3382
6.1296
2.6383
4.0601
0.0686
0.0055
0.3889
-0.4386
0.0577
-0.2331
-0.4783
0.4195
-0.1264
0.2313
-0.0035
0.1445
0.0714
0.0974
0.2462
refined
-49.5120
-42.5080
3.5000
X-RAY DIFFRACTION
4.6474
0.4677
1.9977
3.0064
1.4534
6.2149
0.0580
-0.7250
0.2848
0.2827
-0.1715
0.2741
0.0810
-0.2839
0.1136
0.1859
0.0208
0.0815
0.3231
0.0832
0.1248
refined
-15.9470
-55.2910
-5.3190
X-RAY DIFFRACTION
3.3192
-1.7338
-1.8227
4.6514
1.0378
5.4708
-0.0836
0.3870
-0.2829
-0.2946
-0.1781
0.6328
0.1460
-0.2418
0.2617
0.2773
-0.0431
0.0194
0.0139
0.0033
0.1974
refined
-52.5950
-62.8850
-10.1870
X-RAY DIFFRACTION
6.3714
1.1251
0.2220
2.2995
-0.8913
4.5324
0.0034
0.8912
-0.7045
-0.2602
0.0916
0.0428
0.6256
0.1068
-0.0950
0.3859
0.0249
0.0911
0.2837
-0.0425
0.1102
refined
-22.7180
-66.5220
-26.1240
X-RAY DIFFRACTION
A
3
A
163
X-RAY DIFFRACTION
1
B
3
B
163
X-RAY DIFFRACTION
2
A
179
A
286
X-RAY DIFFRACTION
3
B
179
B
286
X-RAY DIFFRACTION
4
software_defined_assembly
PISA
2
dimeric
1770
-11
25420
B
TPO
171
PHOSPHOTHREONINE
B
TPO
174
THR
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LEU
7
A
N
LEU
10
A
O
TYR
11
A
O
TYR
14
A
N
LEU
17
A
N
LEU
20
A
O
VAL
25
A
O
VAL
28
A
N
ALA
28
A
N
ALA
31
A
O
VAL
37
A
O
VAL
40
A
N
ALA
38
A
N
ALA
41
A
O
MET
92
A
O
MET
95
A
O
LEU
87
A
O
LEU
90
A
N
ALA
80
A
N
ALA
83
A
N
VAL
98
A
N
VAL
101
A
O
ILE
146
A
O
ILE
149
A
N
LEU
145
A
N
LEU
148
A
O
LYS
153
A
O
LYS
156
B
O
LEU
7
B
O
LEU
10
B
N
TYR
11
B
N
TYR
14
B
N
LEU
17
B
N
LEU
20
B
O
VAL
25
B
O
VAL
28
B
N
ASP
30
B
N
ASP
33
B
O
ARG
35
B
O
ARG
38
B
N
ALA
38
B
N
ALA
41
B
O
MET
92
B
O
MET
95
B
O
VAL
91
B
O
VAL
94
B
N
TYR
75
B
N
TYR
78
B
N
VAL
98
B
N
VAL
101
B
O
ILE
146
B
O
ILE
149
B
N
LEU
145
B
N
LEU
148
B
O
LYS
153
B
O
LYS
156
1
A
CD1
LEU
13
A
CD1
LEU
16
0
Y
1
A
CD
ARG
29
A
CD
ARG
32
0
Y
1
A
NE
ARG
29
A
NE
ARG
32
0
Y
1
A
CZ
ARG
29
A
CZ
ARG
32
0
Y
1
A
NH1
ARG
29
A
NH1
ARG
32
0
Y
1
A
NH2
ARG
29
A
NH2
ARG
32
0
Y
1
A
CD1
LEU
42
A
CD1
LEU
45
0
Y
1
A
CD
ARG
43
A
CD
ARG
46
0
Y
1
A
NE
ARG
43
A
NE
ARG
46
0
Y
1
A
CZ
ARG
43
A
CZ
ARG
46
0
Y
1
A
NH1
ARG
43
A
NH1
ARG
46
0
Y
1
A
NH2
ARG
43
A
NH2
ARG
46
0
Y
1
A
CG
LEU
46
A
CG
LEU
49
0
Y
1
A
CD1
LEU
46
A
CD1
LEU
49
0
Y
1
A
CD2
LEU
46
A
CD2
LEU
49
0
Y
1
A
CD
ARG
48
A
CD
ARG
51
0
Y
1
A
NE
ARG
48
A
NE
ARG
51
0
Y
1
A
CZ
ARG
48
A
CZ
ARG
51
0
Y
1
A
NH1
ARG
48
A
NH1
ARG
51
0
Y
1
A
NH2
ARG
48
A
NH2
ARG
51
0
Y
1
A
CG
LEU
54
A
CG
LEU
57
0
Y
1
A
CD1
LEU
54
A
CD1
LEU
57
0
Y
1
A
CD2
LEU
54
A
CD2
LEU
57
0
Y
1
A
CD
ARG
55
A
CD
ARG
58
0
Y
1
A
NE
ARG
55
A
NE
ARG
58
0
Y
1
A
CZ
ARG
55
A
CZ
ARG
58
0
Y
1
A
NH1
ARG
55
A
NH1
ARG
58
0
Y
1
A
NH2
ARG
55
A
NH2
ARG
58
0
Y
1
A
CG
ARG
57
A
CG
ARG
60
0
Y
1
A
CD
ARG
57
A
CD
ARG
60
0
Y
1
A
NE
ARG
57
A
NE
ARG
60
0
Y
1
A
CZ
ARG
57
A
CZ
ARG
60
0
Y
1
A
NH1
ARG
57
A
NH1
ARG
60
0
Y
1
A
NH2
ARG
57
A
NH2
ARG
60
0
Y
1
A
NE
ARG
58
A
NE
ARG
61
0
Y
1
A
CZ
ARG
58
A
CZ
ARG
61
0
Y
1
A
NH1
ARG
58
A
NH1
ARG
61
0
Y
1
A
NH2
ARG
58
A
NH2
ARG
61
0
Y
1
A
CG
GLU
79
A
CG
GLU
82
0
Y
1
A
CD
GLU
79
A
CD
GLU
82
0
Y
1
A
OE1
GLU
79
A
OE1
GLU
82
0
Y
1
A
OE2
GLU
79
A
OE2
GLU
82
0
Y
1
A
CG
GLU
81
A
CG
GLU
84
0
Y
1
A
CD
GLU
81
A
CD
GLU
84
0
Y
1
A
OE1
GLU
81
A
OE1
GLU
84
0
Y
1
A
OE2
GLU
81
A
OE2
GLU
84
0
Y
1
A
CG
LYS
113
A
CG
LYS
116
0
Y
1
A
CD
LYS
113
A
CD
LYS
116
0
Y
1
A
CE
LYS
113
A
CE
LYS
116
0
Y
1
A
NZ
LYS
113
A
NZ
LYS
116
0
Y
1
A
CZ
ARG
189
A
CZ
ARG
192
0
Y
1
A
NH1
ARG
189
A
NH1
ARG
192
0
Y
1
A
NH2
ARG
189
A
NH2
ARG
192
0
Y
1
A
CD
GLU
280
A
CD
GLU
283
0
Y
1
A
OE1
GLU
280
A
OE1
GLU
283
0
Y
1
A
OE2
GLU
280
A
OE2
GLU
283
0
Y
1
A
CG
LYS
286
A
CG
LYS
289
0
Y
1
A
CD
LYS
286
A
CD
LYS
289
0
Y
1
A
CE
LYS
286
A
CE
LYS
289
0
Y
1
A
NZ
LYS
286
A
NZ
LYS
289
0
Y
1
A
CG1
VAL
287
A
CG1
VAL
290
0
Y
1
A
CG2
VAL
287
A
CG2
VAL
290
0
Y
1
B
CD1
ILE
16
B
CD1
ILE
19
0
Y
1
B
CD1
PHE
19
B
CD1
PHE
22
0
Y
1
B
CD2
PHE
19
B
CD2
PHE
22
0
Y
1
B
CE1
PHE
19
B
CE1
PHE
22
0
Y
1
B
CE2
PHE
19
B
CE2
PHE
22
0
Y
1
B
CZ
PHE
19
B
CZ
PHE
22
0
Y
1
B
CG
ARG
48
B
CG
ARG
51
0
Y
1
B
CD
ARG
48
B
CD
ARG
51
0
Y
1
B
NE
ARG
48
B
NE
ARG
51
0
Y
1
B
CZ
ARG
48
B
CZ
ARG
51
0
Y
1
B
NH1
ARG
48
B
NH1
ARG
51
0
Y
1
B
NH2
ARG
48
B
NH2
ARG
51
0
Y
1
B
CG
ARG
55
B
CG
ARG
58
0
Y
1
B
CD
ARG
55
B
CD
ARG
58
0
Y
1
B
NE
ARG
55
B
NE
ARG
58
0
Y
1
B
CZ
ARG
55
B
CZ
ARG
58
0
Y
1
B
NH1
ARG
55
B
NH1
ARG
58
0
Y
1
B
NH2
ARG
55
B
NH2
ARG
58
0
Y
1
B
CD
ARG
57
B
CD
ARG
60
0
Y
1
B
NE
ARG
57
B
NE
ARG
60
0
Y
1
B
CZ
ARG
57
B
CZ
ARG
60
0
Y
1
B
NH1
ARG
57
B
NH1
ARG
60
0
Y
1
B
NH2
ARG
57
B
NH2
ARG
60
0
Y
1
B
CG
ARG
58
B
CG
ARG
61
0
Y
1
B
CD
ARG
58
B
CD
ARG
61
0
Y
1
B
NE
ARG
58
B
NE
ARG
61
0
Y
1
B
CZ
ARG
58
B
CZ
ARG
61
0
Y
1
B
NH1
ARG
58
B
NH1
ARG
61
0
Y
1
B
NH2
ARG
58
B
NH2
ARG
61
0
Y
1
B
CG
GLU
81
B
CG
GLU
84
0
Y
1
B
CD
GLU
81
B
CD
GLU
84
0
Y
1
B
OE1
GLU
81
B
OE1
GLU
84
0
Y
1
B
OE2
GLU
81
B
OE2
GLU
84
0
Y
1
B
NZ
LYS
113
B
NZ
LYS
116
0
Y
1
B
NE
ARG
114
B
NE
ARG
117
0
Y
1
B
CZ
ARG
114
B
CZ
ARG
117
0
Y
1
B
NH1
ARG
114
B
NH1
ARG
117
0
Y
1
B
NH2
ARG
114
B
NH2
ARG
117
0
Y
1
B
CG
GLN
172
B
CG
GLN
175
0
Y
1
B
CD
GLN
172
B
CD
GLN
175
0
Y
1
B
OE1
GLN
172
B
OE1
GLN
175
0
Y
1
B
NE2
GLN
172
B
NE2
GLN
175
0
Y
1
B
CG1
ILE
177
B
CG1
ILE
180
0
Y
1
B
CG2
ILE
177
B
CG2
ILE
180
0
Y
1
B
CD1
ILE
177
B
CD1
ILE
180
0
Y
1
B
CG
ARG
230
B
CG
ARG
233
0
Y
1
B
CD
ARG
230
B
CD
ARG
233
0
Y
1
B
NE
ARG
230
B
NE
ARG
233
0
Y
1
B
CZ
ARG
230
B
CZ
ARG
233
0
Y
1
B
NH1
ARG
230
B
NH1
ARG
233
0
Y
1
B
NH2
ARG
230
B
NH2
ARG
233
0
Y
1
B
CG
LYS
286
B
CG
LYS
289
0
Y
1
B
CD
LYS
286
B
CD
LYS
289
0
Y
1
B
CE
LYS
286
B
CE
LYS
289
0
Y
1
B
NZ
LYS
286
B
NZ
LYS
289
0
Y
1
B
CG1
VAL
287
B
CG1
VAL
290
0
Y
1
B
CG2
VAL
287
B
CG2
VAL
290
0
Y
1
A
C28
XDR
309
C
C28
XDR
1
1
N
1
A
C29
XDR
309
C
C29
XDR
1
1
N
1
A
C30
XDR
309
C
C30
XDR
1
1
N
1
A
C31
XDR
309
C
C31
XDR
1
1
N
1
A
C32
XDR
309
C
C32
XDR
1
1
N
1
B
C28
XDR
309
F
C28
XDR
1
1
N
1
B
C29
XDR
309
F
C29
XDR
1
1
N
1
B
C30
XDR
309
F
C30
XDR
1
1
N
1
B
C31
XDR
309
F
C31
XDR
1
1
N
1
B
C32
XDR
309
F
C32
XDR
1
1
N
1
A
GLY
-2
A
GLY
1
1
Y
1
A
SER
-1
A
SER
2
1
Y
1
A
HIS
0
A
HIS
3
1
Y
1
A
MET
1
A
MET
4
1
Y
1
A
THR
2
A
THR
5
1
Y
1
A
ALA
164
A
ALA
167
1
Y
1
A
ASP
165
A
ASP
168
1
Y
1
A
SER
166
A
SER
169
1
Y
1
A
GLY
167
A
GLY
170
1
Y
1
A
ASN
168
A
ASN
171
1
Y
1
A
SER
169
A
SER
172
1
Y
1
A
VAL
170
A
VAL
173
1
Y
1
A
TPO
171
A
TPO
174
1
Y
1
A
GLN
172
A
GLN
175
1
Y
1
A
THR
173
A
THR
176
1
Y
1
A
ALA
174
A
ALA
177
1
Y
1
A
ALA
175
A
ALA
178
1
Y
1
A
VAL
176
A
VAL
179
1
Y
1
A
ILE
177
A
ILE
180
1
Y
1
A
GLY
178
A
GLY
181
1
Y
1
A
LEU
288
A
LEU
291
1
Y
1
A
THR
289
A
THR
292
1
Y
1
A
ASP
290
A
ASP
293
1
Y
1
A
ALA
291
A
ALA
294
1
Y
1
A
GLU
292
A
GLU
295
1
Y
1
A
ARG
293
A
ARG
296
1
Y
1
A
THR
294
A
THR
297
1
Y
1
A
SER
295
A
SER
298
1
Y
1
A
LEU
296
A
LEU
299
1
Y
1
A
LEU
297
A
LEU
300
1
Y
1
A
SER
298
A
SER
301
1
Y
1
A
SER
299
A
SER
302
1
Y
1
A
ALA
300
A
ALA
303
1
Y
1
A
ALA
301
A
ALA
304
1
Y
1
A
GLY
302
A
GLY
305
1
Y
1
A
ASN
303
A
ASN
306
1
Y
1
A
LEU
304
A
LEU
307
1
Y
1
A
SER
305
A
SER
308
1
Y
1
A
GLY
306
A
GLY
309
1
Y
1
A
PRO
307
A
PRO
310
1
Y
1
A
ARG
308
A
ARG
311
1
Y
1
B
GLY
-2
B
GLY
1
1
Y
1
B
SER
-1
B
SER
2
1
Y
1
B
HIS
0
B
HIS
3
1
Y
1
B
MET
1
B
MET
4
1
Y
1
B
ALA
174
B
ALA
177
1
Y
1
B
ALA
175
B
ALA
178
1
Y
1
B
VAL
176
B
VAL
179
1
Y
1
B
LEU
288
B
LEU
291
1
Y
1
B
THR
289
B
THR
292
1
Y
1
B
ASP
290
B
ASP
293
1
Y
1
B
ALA
291
B
ALA
294
1
Y
1
B
GLU
292
B
GLU
295
1
Y
1
B
ARG
293
B
ARG
296
1
Y
1
B
THR
294
B
THR
297
1
Y
1
B
SER
295
B
SER
298
1
Y
1
B
LEU
296
B
LEU
299
1
Y
1
B
LEU
297
B
LEU
300
1
Y
1
B
SER
298
B
SER
301
1
Y
1
B
SER
299
B
SER
302
1
Y
1
B
ALA
300
B
ALA
303
1
Y
1
B
ALA
301
B
ALA
304
1
Y
1
B
GLY
302
B
GLY
305
1
Y
1
B
ASN
303
B
ASN
306
1
Y
1
B
LEU
304
B
LEU
307
1
Y
1
B
SER
305
B
SER
308
1
Y
1
B
GLY
306
B
GLY
309
1
Y
1
B
PRO
307
B
PRO
310
1
Y
1
B
ARG
308
B
ARG
311
1
Y
1
B
PHE
19
0.059
SIDE CHAIN
1
17.11
2.60
111.60
128.71
A
A
A
CB
CG
CD
ARG
ARG
ARG
43
43
43
N
1
-21.05
2.60
111.60
90.55
A
A
A
CB
CG
CD
ARG
ARG
ARG
48
48
48
N
1
-15.72
2.10
111.80
96.08
A
A
A
CG
CD
NE
ARG
ARG
ARG
48
48
48
N
1
-15.43
1.40
123.60
108.17
A
A
A
CD
NE
CZ
ARG
ARG
ARG
58
58
58
N
1
14.32
1.40
123.60
137.92
A
A
A
CD
NE
CZ
ARG
ARG
ARG
189
189
189
N
1
-3.58
0.50
120.30
116.72
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
189
189
189
N
1
3.03
0.50
120.30
123.33
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
189
189
189
N
1
10.50
1.60
110.90
121.40
A
A
A
CG1
CB
CG2
VAL
VAL
VAL
287
287
287
N
1
7.67
0.70
120.80
128.47
B
B
B
CB
CG
CD2
PHE
PHE
PHE
19
19
19
N
1
-5.21
0.70
120.80
115.59
B
B
B
CB
CG
CD1
PHE
PHE
PHE
19
19
19
N
1
-14.09
2.10
111.80
97.71
B
B
B
CG
CD
NE
ARG
ARG
ARG
57
57
57
N
1
13.25
2.20
113.40
126.65
B
B
B
CA
CB
CG
ARG
ARG
ARG
230
230
230
N
1
A
A
CG
CD1
LEU
LEU
13
13
-0.232
0.037
1.514
1.282
N
1
A
A
CG
CD
ARG
ARG
43
43
-0.180
0.025
1.515
1.335
N
1
A
A
CG
CD
ARG
ARG
48
48
0.497
0.025
1.515
2.012
N
1
A
A
CD
NE
ARG
ARG
58
58
-0.196
0.017
1.460
1.264
N
1
A
A
CB
CG
GLU
GLU
79
79
0.131
0.019
1.517
1.648
N
1
A
A
NE
CZ
ARG
ARG
189
189
-0.463
0.013
1.326
0.863
N
1
A
A
CG
CD
GLU
GLU
280
280
-0.165
0.015
1.515
1.350
N
1
B
B
CG
CD1
PHE
PHE
19
19
0.142
0.015
1.383
1.525
N
1
B
B
CB
CG
GLU
GLU
81
81
-0.161
0.019
1.517
1.356
N
1
B
B
CB
CG1
ILE
ILE
177
177
-0.221
0.028
1.536
1.315
N
1
B
B
CB
CG
ARG
ARG
230
230
-0.240
0.027
1.521
1.281
N
1
A
ASP
9
58.50
13.52
1
A
ARG
10
-121.01
-50.65
1
A
ALA
47
-78.41
20.16
1
A
ARG
137
84.81
-13.42
1
A
ASN
150
89.33
13.16
1
A
ASP
156
78.03
40.64
1
B
SER
8
46.73
21.83
1
B
TYR
75
-94.60
-60.21
1
B
PRO
83
-62.56
5.69
1
B
ARG
137
83.29
-10.20
1
B
ARG
137
82.44
-9.00
1
B
ASP
138
-144.17
50.22
1
B
ALA
180
59.05
1.00
25.529
0.932
0.902
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.26805
0.21806
0.22060
2.80
39.78
1419
26637
5.1
99.23
1.00
0.00
26.189
0.231
RANDOM
LIKELY RESIDUAL
1
isotropic
THROUGHOUT
MOLECULAR REPLACEMENT
0.416
0.307
0.80
0.80
1.20
PknB Leu33Asp kinase domain (1-308)
MAXIMUM LIKELIHOOD
MASK
0.512
2.80
39.78
30
4358
90
0
4238
0.010
0.022
4337
1.407
1.995
5961
5.404
5.000
555
29.853
24.171
187
16.584
15.000
619
20.376
15.000
29
0.174
0.200
672
0.006
0.021
3384
0.467
1.500
2782
0.899
2.000
4476
1.356
3.000
1555
2.340
4.500
1484
0.395
0.345
2.874
96
1946
20
99.90
2.800
50.000
3F69
28331
0.095
1
49.500
32.300
100.000
0.849
2.80
2.90
4.5
1
32.70
100.00
data reduction
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
DENZO
package
data scaling
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
SCALEPACK
package
phasing
Randy J. Read
cimr-phaser@lists.cam.ac.uk
http://www-structmed.cimr.cam.ac.uk/phaser/
PHASER
program
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
data extraction
PDB
help@deposit.rcsb.org
June 11, 2008
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.006
data collection
HKL-2000
Y
Crystal structure of the Mycobacterium tuberculosis PknB mutant kinase domain in complex with KT5720
1
N
N
1
N
N
2
N
N
3
N
N
3
N
N
2
N
N
3
N
N
3
N
N
4
N
N
4
N
N
A
ALA
44
A
ALA
47
HELX_P
A
ALA
47
A
ALA
50
5
1
4
A
ASP
49
A
ASP
52
HELX_P
A
ASN
62
A
ASN
65
1
2
14
A
LEU
100
A
LEU
103
HELX_P
A
GLY
108
A
GLY
111
1
3
9
A
THR
111
A
THR
114
HELX_P
A
GLN
131
A
GLN
134
1
4
21
A
LYS
140
A
LYS
143
HELX_P
A
ALA
142
A
ALA
145
5
5
3
A
SER
184
A
SER
187
HELX_P
A
GLY
190
A
GLY
193
1
6
7
A
ASP
194
A
ASP
197
HELX_P
A
GLY
212
A
GLY
215
1
7
19
A
SER
220
A
SER
223
HELX_P
A
GLU
231
A
GLU
234
1
8
12
A
PRO
235
A
PRO
238
HELX_P
A
ARG
239
A
ARG
242
5
9
5
A
SER
244
A
SER
247
HELX_P
A
LEU
255
A
LEU
258
1
10
12
A
ASN
258
A
ASN
261
HELX_P
A
ARG
262
A
ARG
265
5
11
5
A
THR
265
A
THR
268
HELX_P
A
GLY
279
A
GLY
282
1
12
15
B
ALA
44
B
ALA
47
HELX_P
B
ALA
47
B
ALA
50
5
13
4
B
ASP
49
B
ASP
52
HELX_P
B
ASN
62
B
ASN
65
1
14
14
B
LEU
100
B
LEU
103
HELX_P
B
GLY
108
B
GLY
111
1
15
9
B
THR
111
B
THR
114
HELX_P
B
ASN
132
B
ASN
135
1
16
22
B
LYS
140
B
LYS
143
HELX_P
B
ALA
142
B
ALA
145
5
17
3
B
SER
184
B
SER
187
HELX_P
B
GLY
190
B
GLY
193
1
18
7
B
ASP
194
B
ASP
197
HELX_P
B
GLY
212
B
GLY
215
1
19
19
B
SER
220
B
SER
223
HELX_P
B
GLU
231
B
GLU
234
1
20
12
B
PRO
235
B
PRO
238
HELX_P
B
ARG
239
B
ARG
242
5
21
5
B
SER
244
B
SER
247
HELX_P
B
LEU
255
B
LEU
258
1
22
12
B
ASN
258
B
ASN
261
HELX_P
B
ARG
262
B
ARG
265
5
23
5
B
THR
265
B
THR
268
HELX_P
B
GLY
279
B
GLY
282
1
24
15
covale
1.329
both
B
VAL
170
B
C
VAL
173
1_555
B
TPO
171
B
N
TPO
174
1_555
covale
1.337
both
B
TPO
171
B
C
TPO
174
1_555
B
GLN
172
B
N
GLN
175
1_555
TRANSFERASE
protein kinase, PknB, Mycobacterium tuberculosis, KT5720, Structural Genomics, Structual Genomics, Cocrystallization of PknB kinase domain and inhibitors, TB Structural Genomics Consortium, TBSGC, ATP-binding, Kinase, Magnesium, Metal-binding, Nucleotide-binding, Phosphoprotein, Serine/threonine-protein kinase, Transferase
B
GLY
85
B
GLY
88
1
B
PRO
86
B
PRO
89
23.77
PKNB_MYCTU
UNP
1
1
P0A5S4
MTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEA
ETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA
RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARH
EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAERTSLLSSAAGNLSGPR
1
308
3F69
1
308
P0A5S4
A
1
4
311
1
308
3F69
1
308
P0A5S4
B
1
4
311
1
expression tag
GLY
-2
3F69
A
P0A5S4
UNP
1
1
expression tag
SER
-1
3F69
A
P0A5S4
UNP
2
1
expression tag
HIS
0
3F69
A
P0A5S4
UNP
3
1
LEU
engineered mutation
ASP
33
3F69
A
P0A5S4
UNP
33
36
1
MET
engineered mutation
LEU
145
3F69
A
P0A5S4
UNP
145
148
1
MET
engineered mutation
VAL
155
3F69
A
P0A5S4
UNP
155
158
2
expression tag
GLY
-2
3F69
B
P0A5S4
UNP
1
2
expression tag
SER
-1
3F69
B
P0A5S4
UNP
2
2
expression tag
HIS
0
3F69
B
P0A5S4
UNP
3
2
LEU
engineered mutation
ASP
33
3F69
B
P0A5S4
UNP
33
36
2
MET
engineered mutation
LEU
145
3F69
B
P0A5S4
UNP
145
148
2
MET
engineered mutation
VAL
155
3F69
B
P0A5S4
UNP
155
158
6
3
6
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
HIS
6
A
HIS
9
A
LEU
7
A
LEU
10
A
TYR
11
A
TYR
14
A
PHE
19
A
PHE
22
A
SER
23
A
SER
26
A
ASP
30
A
ASP
33
A
ARG
35
A
ARG
38
A
LEU
42
A
LEU
45
A
GLY
85
A
GLY
88
A
MET
92
A
MET
95
A
VAL
74
A
VAL
77
A
THR
82
A
THR
85
A
GLY
97
A
GLY
100
A
THR
99
A
THR
102
A
ILE
144
A
ILE
147
A
SER
147
A
SER
150
A
VAL
152
A
VAL
155
A
VAL
154
A
VAL
157
B
HIS
6
B
HIS
9
B
LEU
7
B
LEU
10
B
TYR
11
B
TYR
14
B
PHE
19
B
PHE
22
B
SER
23
B
SER
26
B
ASP
30
B
ASP
33
B
ARG
35
B
ARG
38
B
LEU
42
B
LEU
45
B
LEU
87
B
LEU
90
B
GLU
93
B
GLU
96
B
VAL
74
B
VAL
77
B
ALA
80
B
ALA
83
B
GLY
97
B
GLY
100
B
THR
99
B
THR
102
B
ILE
144
B
ILE
147
B
SER
147
B
SER
150
B
VAL
152
B
VAL
155
B
VAL
154
B
VAL
157
BINDING SITE FOR RESIDUE XDR A 309
A
XDR
309
Software
10
BINDING SITE FOR RESIDUE SO4 A 310
A
SO4
310
Software
2
BINDING SITE FOR RESIDUE SO4 A 311
A
SO4
311
Software
4
BINDING SITE FOR RESIDUE XDR B 309
B
XDR
309
Software
12
BINDING SITE FOR RESIDUE SO4 B 310
B
SO4
310
Software
1
BINDING SITE FOR RESIDUE SO4 B 311
B
SO4
311
Software
4
A
LEU
17
A
LEU
20
10
1_555
A
GLY
18
A
GLY
21
10
1_555
A
VAL
25
A
VAL
28
10
1_555
A
ALA
38
A
ALA
41
10
1_555
A
GLU
93
A
GLU
96
10
1_555
A
VAL
95
A
VAL
98
10
1_555
A
GLY
97
A
GLY
100
10
1_555
A
ALA
142
A
ALA
145
10
1_555
A
ASN
143
A
ASN
146
10
1_555
A
VAL
155
A
VAL
158
10
1_555
A
ARG
10
A
ARG
13
2
1_555
A
ARG
32
A
ARG
35
2
1_555
A
ALA
256
A
ALA
259
4
1_555
A
LYS
257
A
LYS
260
4
1_555
A
ASN
258
A
ASN
261
4
1_555
A
ASN
261
A
ASN
264
4
1_555
B
LEU
17
B
LEU
20
12
1_555
B
GLY
18
B
GLY
21
12
1_555
B
ALA
38
B
ALA
41
12
1_555
B
LYS
40
B
LYS
43
12
1_555
B
GLU
93
B
GLU
96
12
1_555
B
VAL
95
B
VAL
98
12
1_555
B
THR
99
B
THR
102
12
1_555
B
ALA
142
B
ALA
145
12
1_555
B
ASN
143
B
ASN
146
12
1_555
B
LEU
145
B
LEU
148
12
1_555
B
VAL
155
B
VAL
158
12
1_555
B
ASP
156
B
ASP
159
12
1_555
B
ARG
32
B
ARG
35
1
1_555
B
ALA
256
B
ALA
259
4
1_555
B
LYS
257
B
LYS
260
4
1_555
B
ASN
258
B
ASN
261
4
1_555
B
ASN
261
B
ASN
264
4
1_555
210
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