0.039276 0.000000 0.000000 0.000000 0.017480 0.000000 0.000000 0.000000 0.008059 0.000000 0.000000 0.000000 Bonanno, J.B. Rutter, M. Bain, K.T. Miller, S. Romero, R. Wasserman, S. 0000-0002-0254-4955 Sauder, J.M. 0000-0002-2487-9713 Burley, S.K. Almo, S.C. New York SGX Research Center for Structural Genomics (NYSGXRC) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.000 90.010 90.000 25.461 57.207 124.083 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 R C N 309 N O N 310 N C N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N N Y 330 N C Y 331 N C Y 332 N C Y 333 N C Y 334 N C N 335 N O N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C Y 353 N C Y 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C N 359 N O N 360 N O N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N N N 373 S C N 374 N C N 375 N O N 376 N C N 377 N C N 378 N C N 379 N O N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub Y 322 N sing Y 323 N sing N 324 N sing Y 325 N sing Y 326 N doub N 327 N sing Y 328 N doub N 329 N sing Y 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing Y 345 N doub Y 346 N sing Y 347 N sing N 348 N sing Y 349 N doub N 350 N sing Y 351 N doub N 352 N sing Y 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing To be Published 0353 Crystal structure of a C2 domain from human synaptotagmin-like protein 4 0000-0002-2487-9713 10.2210/pdb3fdw/pdb pdb_00003fdw 100 1 CCD 2008-11-23 MAR CCD 165 mm diamond SINGLE WAVELENGTH M x-ray 1 0.97958 1.0 31-ID APS 0.97958 SYNCHROTRON APS BEAMLINE 31-ID 17293.674 Synaptotagmin-like protein 4 C2 domain 2 man polymer 18.015 water 134 nat water Exophilin-2, Granuphilin no no MSLGNIFVTGRIAFSLKYEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETL RYEIPESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKISAESEGHHHHHH MSLGNIFVTGRIAFSLKYEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETL RYEIPESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKISAESEGHHHHHH A,B NYSGXRC-13071a polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample SYTL4 9606 Homo sapiens 562 Escherichia coli BL21(DE3) plasmid modified pET26 1 2.61 52.92 VAPOR DIFFUSION 7.0 100mM Tris HCl pH 8.5, 1.6M DL-malic acid pH 7, vapor diffusion, temperature 294K 294 New York SGX Research Center for Structural Genomics NYSGXRC PSI, Protein Structure Initiative software audit_author audit_author citation_author chem_comp_atom chem_comp_bond database_2 repository Initial release Version format compliance Refinement description Data collection Structure summary Database references Structure summary Data collection Database references 1 0 2008-12-23 1 1 2011-07-13 1 2 2017-11-01 1 3 2018-11-21 1 4 2021-02-10 1 5 2023-12-27 _audit_author.identifier_ORCID _audit_author.identifier_ORCID _citation_author.identifier_ORCID _database_2.pdbx_DOI _database_2.pdbx_database_accession Y RCSB Y RCSB 2008-11-26 REL REL HOH water HOH 1 2 HOH HOH 1 A HOH 7 2 HOH HOH 7 A HOH 9 2 HOH HOH 9 A HOH 11 2 HOH HOH 11 A HOH 12 2 HOH HOH 12 A HOH 14 2 HOH HOH 14 A HOH 18 2 HOH HOH 18 A HOH 20 2 HOH HOH 20 A HOH 21 2 HOH HOH 21 A HOH 23 2 HOH HOH 23 A HOH 26 2 HOH HOH 26 A HOH 27 2 HOH HOH 27 A HOH 28 2 HOH HOH 28 A HOH 31 2 HOH HOH 31 A HOH 35 2 HOH HOH 35 A HOH 39 2 HOH HOH 39 A HOH 40 2 HOH HOH 40 A HOH 43 2 HOH HOH 43 A HOH 44 2 HOH HOH 44 A HOH 45 2 HOH HOH 45 A HOH 49 2 HOH HOH 49 A HOH 51 2 HOH HOH 51 A HOH 52 2 HOH HOH 52 A HOH 54 2 HOH HOH 54 A HOH 58 2 HOH HOH 58 A HOH 60 2 HOH HOH 60 A HOH 61 2 HOH HOH 61 A HOH 75 2 HOH HOH 75 A HOH 76 2 HOH HOH 76 A HOH 78 2 HOH HOH 78 A HOH 79 2 HOH HOH 79 A HOH 81 2 HOH HOH 81 A HOH 84 2 HOH HOH 84 A HOH 87 2 HOH HOH 87 A HOH 90 2 HOH HOH 90 A HOH 95 2 HOH HOH 95 A HOH 96 2 HOH HOH 96 A HOH 97 2 HOH HOH 97 A HOH 100 2 HOH HOH 100 A HOH 105 2 HOH HOH 105 A HOH 106 2 HOH HOH 106 A HOH 113 2 HOH HOH 113 A HOH 120 2 HOH HOH 120 A HOH 121 2 HOH HOH 121 A HOH 123 2 HOH HOH 123 A HOH 124 2 HOH HOH 124 A HOH 128 2 HOH HOH 128 A HOH 133 2 HOH HOH 133 A HOH 135 2 HOH HOH 135 A HOH 140 2 HOH HOH 140 A HOH 144 2 HOH HOH 144 A HOH 145 2 HOH HOH 145 A HOH 159 2 HOH HOH 159 A HOH 190 2 HOH HOH 190 A HOH 205 2 HOH HOH 205 A HOH 215 2 HOH HOH 215 A HOH 223 2 HOH HOH 223 A HOH 234 2 HOH HOH 234 A HOH 235 2 HOH HOH 235 A HOH 236 2 HOH HOH 236 A HOH 237 2 HOH HOH 237 A HOH 238 2 HOH HOH 238 A HOH 242 2 HOH HOH 242 A HOH 243 2 HOH HOH 243 A HOH 245 2 HOH HOH 245 A HOH 246 2 HOH HOH 246 A HOH 247 2 HOH HOH 247 A HOH 2 2 HOH HOH 2 B HOH 3 2 HOH HOH 3 B HOH 4 2 HOH HOH 4 B HOH 5 2 HOH HOH 5 B HOH 6 2 HOH HOH 6 B HOH 8 2 HOH HOH 8 B HOH 10 2 HOH HOH 10 B HOH 15 2 HOH HOH 15 B HOH 16 2 HOH HOH 16 B HOH 17 2 HOH HOH 17 B HOH 19 2 HOH HOH 19 B HOH 22 2 HOH HOH 22 B HOH 24 2 HOH HOH 24 B HOH 25 2 HOH HOH 25 B HOH 29 2 HOH HOH 29 B HOH 30 2 HOH HOH 30 B HOH 34 2 HOH HOH 34 B HOH 37 2 HOH HOH 37 B HOH 38 2 HOH HOH 38 B HOH 41 2 HOH HOH 41 B HOH 46 2 HOH HOH 46 B HOH 47 2 HOH HOH 47 B HOH 48 2 HOH HOH 48 B HOH 50 2 HOH HOH 50 B HOH 55 2 HOH HOH 55 B HOH 59 2 HOH HOH 59 B HOH 62 2 HOH HOH 62 B HOH 63 2 HOH HOH 63 B HOH 65 2 HOH HOH 65 B HOH 66 2 HOH HOH 66 B HOH 67 2 HOH HOH 67 B HOH 69 2 HOH HOH 69 B HOH 71 2 HOH HOH 71 B HOH 73 2 HOH HOH 73 B HOH 77 2 HOH HOH 77 B HOH 80 2 HOH HOH 80 B HOH 85 2 HOH HOH 85 B HOH 86 2 HOH HOH 86 B HOH 89 2 HOH HOH 89 B HOH 92 2 HOH HOH 92 B HOH 104 2 HOH HOH 104 B HOH 108 2 HOH HOH 108 B HOH 111 2 HOH HOH 111 B HOH 122 2 HOH HOH 122 B HOH 131 2 HOH HOH 131 B HOH 132 2 HOH HOH 132 B HOH 149 2 HOH HOH 149 B HOH 157 2 HOH HOH 157 B HOH 160 2 HOH HOH 160 B HOH 167 2 HOH HOH 167 B HOH 194 2 HOH HOH 194 B HOH 214 2 HOH HOH 214 B HOH 217 2 HOH HOH 217 B HOH 220 2 HOH HOH 220 B HOH 224 2 HOH HOH 224 B HOH 225 2 HOH HOH 225 B HOH 228 2 HOH HOH 228 B HOH 233 2 HOH HOH 233 B HOH 239 2 HOH HOH 239 B HOH 240 2 HOH HOH 240 B HOH 241 2 HOH HOH 241 B HOH 244 2 HOH HOH 244 B HOH 248 2 HOH HOH 248 B HOH 249 2 HOH HOH 249 B HOH 250 2 HOH HOH 250 B HOH 251 2 HOH HOH 251 B HOH 252 2 HOH HOH 252 B n 1 349 A n 2 350 A n 3 351 A n 4 352 A n 5 353 A ILE 354 n 6 ILE 354 A PHE 355 n 7 PHE 355 A VAL 356 n 8 VAL 356 A THR 357 n 9 THR 357 A GLY 358 n 10 GLY 358 A ARG 359 n 11 ARG 359 A ILE 360 n 12 ILE 360 A ALA 361 n 13 ALA 361 A PHE 362 n 14 PHE 362 A SER 363 n 15 SER 363 A LEU 364 n 16 LEU 364 A LYS 365 n 17 LYS 365 A TYR 366 n 18 TYR 366 A GLU 367 n 19 GLU 367 A GLN 368 n 20 GLN 368 A GLN 369 n 21 GLN 369 A THR 370 n 22 THR 370 A GLN 371 n 23 GLN 371 A SER 372 n 24 SER 372 A LEU 373 n 25 LEU 373 A VAL 374 n 26 VAL 374 A VAL 375 n 27 VAL 375 A HIS 376 n 28 HIS 376 A VAL 377 n 29 VAL 377 A LYS 378 n 30 LYS 378 A GLU 379 n 31 GLU 379 A CYS 380 n 32 CYS 380 A HIS 381 n 33 HIS 381 A GLN 382 n 34 GLN 382 A LEU 383 n 35 LEU 383 A ALA 384 n 36 ALA 384 A TYR 385 n 37 TYR 385 A ALA 386 n 38 ALA 386 A ASP 387 n 39 ASP 387 A GLU 388 n 40 GLU 388 A ALA 389 n 41 ALA 389 A LYS 390 n 42 LYS 390 A LYS 391 n 43 LYS 391 A ARG 392 n 44 ARG 392 A SER 393 n 45 SER 393 A ASN 394 n 46 ASN 394 A PRO 395 n 47 PRO 395 A TYR 396 n 48 TYR 396 A VAL 397 n 49 VAL 397 A LYS 398 n 50 LYS 398 A THR 399 n 51 THR 399 A TYR 400 n 52 TYR 400 A LEU 401 n 53 LEU 401 A LEU 402 n 54 LEU 402 A PRO 403 n 55 PRO 403 A ASP 404 n 56 ASP 404 A LYS 405 n 57 LYS 405 A SER 406 n 58 SER 406 A ARG 407 n 59 ARG 407 A GLN 408 n 60 GLN 408 A GLY 409 n 61 GLY 409 A LYS 410 n 62 LYS 410 A ARG 411 n 63 ARG 411 A LYS 412 n 64 LYS 412 A THR 413 n 65 THR 413 A SER 414 n 66 SER 414 A ILE 415 n 67 ILE 415 A LYS 416 n 68 LYS 416 A ARG 417 n 69 ARG 417 A ASP 418 n 70 ASP 418 A THR 419 n 71 THR 419 A VAL 420 n 72 VAL 420 A ASN 421 n 73 ASN 421 A PRO 422 n 74 PRO 422 A LEU 423 n 75 LEU 423 A TYR 424 n 76 TYR 424 A ASP 425 n 77 ASP 425 A GLU 426 n 78 GLU 426 A THR 427 n 79 THR 427 A LEU 428 n 80 LEU 428 A ARG 429 n 81 ARG 429 A TYR 430 n 82 TYR 430 A GLU 431 n 83 GLU 431 A ILE 432 n 84 ILE 432 A PRO 433 n 85 PRO 433 A GLU 434 n 86 GLU 434 A SER 435 n 87 SER 435 A LEU 436 n 88 LEU 436 A LEU 437 n 89 LEU 437 A ALA 438 n 90 ALA 438 A GLN 439 n 91 GLN 439 A ARG 440 n 92 ARG 440 A THR 441 n 93 THR 441 A LEU 442 n 94 LEU 442 A GLN 443 n 95 GLN 443 A PHE 444 n 96 PHE 444 A SER 445 n 97 SER 445 A VAL 446 n 98 VAL 446 A TRP 447 n 99 TRP 447 A HIS 448 n 100 HIS 448 A HIS 449 n 101 HIS 449 A GLY 450 n 102 GLY 450 A ARG 451 n 103 ARG 451 A PHE 452 n 104 PHE 452 A GLY 453 n 105 GLY 453 A ARG 454 n 106 ARG 454 A ASN 455 n 107 ASN 455 A THR 456 n 108 THR 456 A PHE 457 n 109 PHE 457 A LEU 458 n 110 LEU 458 A GLY 459 n 111 GLY 459 A GLU 460 n 112 GLU 460 A ALA 461 n 113 ALA 461 A GLU 462 n 114 GLU 462 A ILE 463 n 115 ILE 463 A GLN 464 n 116 GLN 464 A MET 465 n 117 MET 465 A ASP 466 n 118 ASP 466 A SER 467 n 119 SER 467 A TRP 468 n 120 TRP 468 A LYS 469 n 121 LYS 469 A LEU 470 n 122 LEU 470 A ASP 471 n 123 ASP 471 A LYS 472 n 124 LYS 472 A LYS 473 n 125 LYS 473 A LEU 474 n 126 LEU 474 A ASP 475 n 127 ASP 475 A HIS 476 n 128 HIS 476 A CYS 477 n 129 CYS 477 A LEU 478 n 130 LEU 478 A PRO 479 n 131 PRO 479 A LEU 480 n 132 LEU 480 A HIS 481 n 133 HIS 481 A GLY 482 n 134 GLY 482 A LYS 483 n 135 LYS 483 A n 136 484 A n 137 485 A n 138 486 A n 139 487 A n 140 488 A n 141 489 A n 142 490 A n 143 491 A n 144 492 A n 145 493 A n 146 494 A n 147 495 A n 148 496 A n 1 349 B n 2 350 B n 3 351 B n 4 352 B n 5 353 B ILE 354 n 6 ILE 354 B PHE 355 n 7 PHE 355 B VAL 356 n 8 VAL 356 B THR 357 n 9 THR 357 B GLY 358 n 10 GLY 358 B ARG 359 n 11 ARG 359 B ILE 360 n 12 ILE 360 B ALA 361 n 13 ALA 361 B PHE 362 n 14 PHE 362 B SER 363 n 15 SER 363 B LEU 364 n 16 LEU 364 B LYS 365 n 17 LYS 365 B TYR 366 n 18 TYR 366 B GLU 367 n 19 GLU 367 B GLN 368 n 20 GLN 368 B GLN 369 n 21 GLN 369 B THR 370 n 22 THR 370 B GLN 371 n 23 GLN 371 B SER 372 n 24 SER 372 B LEU 373 n 25 LEU 373 B VAL 374 n 26 VAL 374 B VAL 375 n 27 VAL 375 B HIS 376 n 28 HIS 376 B VAL 377 n 29 VAL 377 B LYS 378 n 30 LYS 378 B GLU 379 n 31 GLU 379 B CYS 380 n 32 CYS 380 B HIS 381 n 33 HIS 381 B GLN 382 n 34 GLN 382 B LEU 383 n 35 LEU 383 B ALA 384 n 36 ALA 384 B TYR 385 n 37 TYR 385 B ALA 386 n 38 ALA 386 B ASP 387 n 39 ASP 387 B GLU 388 n 40 GLU 388 B ALA 389 n 41 ALA 389 B LYS 390 n 42 LYS 390 B LYS 391 n 43 LYS 391 B ARG 392 n 44 ARG 392 B SER 393 n 45 SER 393 B ASN 394 n 46 ASN 394 B PRO 395 n 47 PRO 395 B TYR 396 n 48 TYR 396 B VAL 397 n 49 VAL 397 B LYS 398 n 50 LYS 398 B THR 399 n 51 THR 399 B TYR 400 n 52 TYR 400 B LEU 401 n 53 LEU 401 B LEU 402 n 54 LEU 402 B PRO 403 n 55 PRO 403 B ASP 404 n 56 ASP 404 B LYS 405 n 57 LYS 405 B SER 406 n 58 SER 406 B ARG 407 n 59 ARG 407 B GLN 408 n 60 GLN 408 B GLY 409 n 61 GLY 409 B LYS 410 n 62 LYS 410 B ARG 411 n 63 ARG 411 B LYS 412 n 64 LYS 412 B THR 413 n 65 THR 413 B SER 414 n 66 SER 414 B ILE 415 n 67 ILE 415 B LYS 416 n 68 LYS 416 B ARG 417 n 69 ARG 417 B ASP 418 n 70 ASP 418 B THR 419 n 71 THR 419 B VAL 420 n 72 VAL 420 B ASN 421 n 73 ASN 421 B PRO 422 n 74 PRO 422 B LEU 423 n 75 LEU 423 B TYR 424 n 76 TYR 424 B ASP 425 n 77 ASP 425 B GLU 426 n 78 GLU 426 B THR 427 n 79 THR 427 B LEU 428 n 80 LEU 428 B ARG 429 n 81 ARG 429 B TYR 430 n 82 TYR 430 B GLU 431 n 83 GLU 431 B ILE 432 n 84 ILE 432 B PRO 433 n 85 PRO 433 B GLU 434 n 86 GLU 434 B SER 435 n 87 SER 435 B LEU 436 n 88 LEU 436 B LEU 437 n 89 LEU 437 B ALA 438 n 90 ALA 438 B GLN 439 n 91 GLN 439 B ARG 440 n 92 ARG 440 B THR 441 n 93 THR 441 B LEU 442 n 94 LEU 442 B GLN 443 n 95 GLN 443 B PHE 444 n 96 PHE 444 B SER 445 n 97 SER 445 B VAL 446 n 98 VAL 446 B TRP 447 n 99 TRP 447 B HIS 448 n 100 HIS 448 B HIS 449 n 101 HIS 449 B GLY 450 n 102 GLY 450 B ARG 451 n 103 ARG 451 B PHE 452 n 104 PHE 452 B GLY 453 n 105 GLY 453 B ARG 454 n 106 ARG 454 B ASN 455 n 107 ASN 455 B THR 456 n 108 THR 456 B PHE 457 n 109 PHE 457 B LEU 458 n 110 LEU 458 B GLY 459 n 111 GLY 459 B GLU 460 n 112 GLU 460 B ALA 461 n 113 ALA 461 B GLU 462 n 114 GLU 462 B ILE 463 n 115 ILE 463 B GLN 464 n 116 GLN 464 B MET 465 n 117 MET 465 B ASP 466 n 118 ASP 466 B SER 467 n 119 SER 467 B TRP 468 n 120 TRP 468 B LYS 469 n 121 LYS 469 B LEU 470 n 122 LEU 470 B ASP 471 n 123 ASP 471 B LYS 472 n 124 LYS 472 B LYS 473 n 125 LYS 473 B LEU 474 n 126 LEU 474 B ASP 475 n 127 ASP 475 B HIS 476 n 128 HIS 476 B CYS 477 n 129 CYS 477 B LEU 478 n 130 LEU 478 B PRO 479 n 131 PRO 479 B LEU 480 n 132 LEU 480 B HIS 481 n 133 HIS 481 B GLY 482 n 134 GLY 482 B LYS 483 n 135 LYS 483 B n 136 484 B n 137 485 B n 138 486 B n 139 487 B n 140 488 B n 141 489 B n 142 490 B n 143 491 B n 144 492 B n 145 493 B n 146 494 B n 147 495 B n 148 496 B author_and_software_defined_assembly PISA 1 monomeric author_and_software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O LEU 428 A O LEU 80 A N VAL 375 A N VAL 27 A O VAL 374 A O VAL 26 A N LYS 365 A N LYS 17 A N ILE 360 A N ILE 12 A O LEU 478 A O LEU 130 A O ARG 411 A O ARG 63 A N THR 399 A N THR 51 A N TYR 400 A N TYR 52 A O GLN 443 A O GLN 95 A N VAL 446 A N VAL 98 A O LEU 458 A O LEU 110 B O LEU 428 B O LEU 80 B N VAL 375 B N VAL 27 B O VAL 374 B O VAL 26 B N LYS 365 B N LYS 17 B N ILE 360 B N ILE 12 B O LEU 478 B O LEU 130 B O ARG 411 B O ARG 63 B N THR 399 B N THR 51 B N TYR 400 B N TYR 52 B O GLN 443 B O GLN 95 B N VAL 446 B N VAL 98 B O LEU 458 B O LEU 110 1 A CG LYS 365 A CG LYS 17 1 Y 1 A CD LYS 365 A CD LYS 17 1 Y 1 A CE LYS 365 A CE LYS 17 1 Y 1 A NZ LYS 365 A NZ LYS 17 1 Y 1 A CG GLN 369 A CG GLN 21 1 Y 1 A CD GLN 369 A CD GLN 21 1 Y 1 A OE1 GLN 369 A OE1 GLN 21 1 Y 1 A NE2 GLN 369 A NE2 GLN 21 1 Y 1 A OG1 THR 370 A OG1 THR 22 1 Y 1 A CG2 THR 370 A CG2 THR 22 1 Y 1 A CG LYS 390 A CG LYS 42 1 Y 1 A CD LYS 390 A CD LYS 42 1 Y 1 A CE LYS 390 A CE LYS 42 1 Y 1 A NZ LYS 390 A NZ LYS 42 1 Y 1 A CG LYS 391 A CG LYS 43 1 Y 1 A CD LYS 391 A CD LYS 43 1 Y 1 A CE LYS 391 A CE LYS 43 1 Y 1 A NZ LYS 391 A NZ LYS 43 1 Y 1 A CG ARG 407 A CG ARG 59 1 Y 1 A CD ARG 407 A CD ARG 59 1 Y 1 A NE ARG 407 A NE ARG 59 1 Y 1 A CZ ARG 407 A CZ ARG 59 1 Y 1 A NH1 ARG 407 A NH1 ARG 59 1 Y 1 A NH2 ARG 407 A NH2 ARG 59 1 Y 1 A OG SER 435 A OG SER 87 1 Y 1 A CG GLN 439 A CG GLN 91 1 Y 1 A CD GLN 439 A CD GLN 91 1 Y 1 A OE1 GLN 439 A OE1 GLN 91 1 Y 1 A NE2 GLN 439 A NE2 GLN 91 1 Y 1 A CG ASP 466 A CG ASP 118 1 Y 1 A OD1 ASP 466 A OD1 ASP 118 1 Y 1 A OD2 ASP 466 A OD2 ASP 118 1 Y 1 A CG LYS 469 A CG LYS 121 1 Y 1 A CD LYS 469 A CD LYS 121 1 Y 1 A CE LYS 469 A CE LYS 121 1 Y 1 A NZ LYS 469 A NZ LYS 121 1 Y 1 A CG LYS 483 A CG LYS 135 1 Y 1 A CD LYS 483 A CD LYS 135 1 Y 1 A CE LYS 483 A CE LYS 135 1 Y 1 A NZ LYS 483 A NZ LYS 135 1 Y 1 B CG LYS 365 B CG LYS 17 1 Y 1 B CD LYS 365 B CD LYS 17 1 Y 1 B CE LYS 365 B CE LYS 17 1 Y 1 B NZ LYS 365 B NZ LYS 17 1 Y 1 B CG GLN 369 B CG GLN 21 1 Y 1 B CD GLN 369 B CD GLN 21 1 Y 1 B OE1 GLN 369 B OE1 GLN 21 1 Y 1 B NE2 GLN 369 B NE2 GLN 21 1 Y 1 B OG1 THR 370 B OG1 THR 22 1 Y 1 B CG2 THR 370 B CG2 THR 22 1 Y 1 B CG LYS 390 B CG LYS 42 1 Y 1 B CD LYS 390 B CD LYS 42 1 Y 1 B CE LYS 390 B CE LYS 42 1 Y 1 B NZ LYS 390 B NZ LYS 42 1 Y 1 B CG LYS 391 B CG LYS 43 1 Y 1 B CD LYS 391 B CD LYS 43 1 Y 1 B CE LYS 391 B CE LYS 43 1 Y 1 B NZ LYS 391 B NZ LYS 43 1 Y 1 B CG ARG 407 B CG ARG 59 1 Y 1 B CD ARG 407 B CD ARG 59 1 Y 1 B NE ARG 407 B NE ARG 59 1 Y 1 B CZ ARG 407 B CZ ARG 59 1 Y 1 B NH1 ARG 407 B NH1 ARG 59 1 Y 1 B NH2 ARG 407 B NH2 ARG 59 1 Y 1 B OG SER 435 B OG SER 87 1 Y 1 B CG GLN 439 B CG GLN 91 1 Y 1 B CD GLN 439 B CD GLN 91 1 Y 1 B OE1 GLN 439 B OE1 GLN 91 1 Y 1 B NE2 GLN 439 B NE2 GLN 91 1 Y 1 B CG ASP 466 B CG ASP 118 1 Y 1 B OD1 ASP 466 B OD1 ASP 118 1 Y 1 B OD2 ASP 466 B OD2 ASP 118 1 Y 1 B CG LYS 469 B CG LYS 121 1 Y 1 B CD LYS 469 B CD LYS 121 1 Y 1 B CE LYS 469 B CE LYS 121 1 Y 1 B NZ LYS 469 B NZ LYS 121 1 Y 1 B CG LYS 483 B CG LYS 135 1 Y 1 B CD LYS 483 B CD LYS 135 1 Y 1 B CE LYS 483 B CE LYS 135 1 Y 1 B NZ LYS 483 B NZ LYS 135 1 Y 1 A MET 349 A MET 1 1 Y 1 A SER 350 A SER 2 1 Y 1 A LEU 351 A LEU 3 1 Y 1 A GLY 352 A GLY 4 1 Y 1 A ASN 353 A ASN 5 1 Y 1 A ILE 484 A ILE 136 1 Y 1 A SER 485 A SER 137 1 Y 1 A ALA 486 A ALA 138 1 Y 1 A GLU 487 A GLU 139 1 Y 1 A SER 488 A SER 140 1 Y 1 A GLU 489 A GLU 141 1 Y 1 A GLY 490 A GLY 142 1 Y 1 A HIS 491 A HIS 143 1 Y 1 A HIS 492 A HIS 144 1 Y 1 A HIS 493 A HIS 145 1 Y 1 A HIS 494 A HIS 146 1 Y 1 A HIS 495 A HIS 147 1 Y 1 A HIS 496 A HIS 148 1 Y 1 B MET 349 B MET 1 1 Y 1 B SER 350 B SER 2 1 Y 1 B LEU 351 B LEU 3 1 Y 1 B GLY 352 B GLY 4 1 Y 1 B ASN 353 B ASN 5 1 Y 1 B ILE 484 B ILE 136 1 Y 1 B SER 485 B SER 137 1 Y 1 B ALA 486 B ALA 138 1 Y 1 B GLU 487 B GLU 139 1 Y 1 B SER 488 B SER 140 1 Y 1 B GLU 489 B GLU 141 1 Y 1 B GLY 490 B GLY 142 1 Y 1 B HIS 491 B HIS 143 1 Y 1 B HIS 492 B HIS 144 1 Y 1 B HIS 493 B HIS 145 1 Y 1 B HIS 494 B HIS 146 1 Y 1 B HIS 495 B HIS 147 1 Y 1 B HIS 496 B HIS 148 1 Y 1 A GLU 379 179.41 149.17 1 A ILE 432 -173.33 109.00 1 A PRO 433 -38.75 164.16 1 A PHE 452 53.14 15.78 1 B GLN 371 32.31 60.31 1 B PHE 452 53.62 15.31 90.57 38.124 17.12 -0.220 0.000 -0.010 -0.050 0.000 0.270 0.927 0.896 0.280 0.233 0.236 2.200 20.000 945 18275 18275 5.200 100.000 0.986 0.976 1.00 1.00 0.747 6.218 0.161 0.266 0.224 RANDOM 1 THROUGHOUT 0.00 0 SAD 0.266 0.224 0.800 0.800 1.200 MAXIMUM LIKELIHOOD BABINET MODEL WITH MASK 2.200 20.000 134 2208 0 0 2074 0.015 0.021 2124 1.565 1.950 2878 7.706 5.000 258 32.955 23.000 100 15.691 15.000 356 15.904 15.000 16 0.102 0.200 316 0.008 0.021 1614 1.085 1.500 1296 1.951 2.000 2072 2.457 3.000 828 3.956 4.500 806 0.300 0.259 2.256 64 1259 1323 1259 20 100.000 31.8 2.200 33.520 3FDW 18310 18310 0 0 0.072 0.072 1 12.8 4.200 100.000 0.230 2.20 2.32 4.9 11509 2720 0.230 4.20 100.00 data scaling Phil R. Evans pre@mrc-lmb.cam.ac.uk 21/9/2006 Fortran_77 http://www.ccp4.ac.uk/dist/html/scala.html SCALA other 3.2.25 refinement Garib N. Murshudov garib@ysbl.york.ac.uk Fortran_77 http://www.ccp4.ac.uk/dist/html/refmac5.html REFMAC program data extraction PDB help@deposit.rcsb.org June 11, 2008 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.006 data collection MAR345 CCD data reduction MOSFLM phasing SHELXCD model building SHELXE Crystal structure of a C2 domain from human synaptotagmin-like protein 4 1 N N 1 N N 2 N N 2 N N A SER 406 A SER 58 HELX_P A GLN 408 A GLN 60 5 1 3 A LEU 436 A LEU 88 HELX_P A GLN 439 A GLN 91 5 2 4 A ARG 451 A ARG 103 HELX_P A GLY 453 A GLY 105 5 3 3 A MET 465 A MET 117 HELX_P A LYS 469 A LYS 121 1 4 5 B SER 406 B SER 58 HELX_P B GLN 408 B GLN 60 5 5 3 B PRO 433 B PRO 85 HELX_P B ALA 438 B ALA 90 1 6 6 B ARG 451 B ARG 103 HELX_P B GLY 453 B GLY 105 5 7 3 B MET 465 B MET 117 HELX_P B LYS 469 B LYS 121 1 8 5 LIPID BINDING PROTEIN STRUCTURAL GENOMICS, PHOSPHOLIPID BINDING, Alternative splicing, Cell membrane, Cytoplasmic vesicle, Membrane, Metal-binding, Phosphoprotein, Polymorphism, Zinc, Zinc-finger, PSI-2, Protein Structure Initiative, New York SGX Research Center for Structural Genomics, NYSGXRC, LIPID BINDING PROTEIN A LEU 402 A LEU 54 1 A PRO 403 A PRO 55 11.25 B LEU 402 B LEU 54 1 B PRO 403 B PRO 55 8.90 SYTL4_HUMAN UNP 1 352 Q96C24 GNIFVTGRIAFSLKYEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYE IPESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKISAES 352 488 3FDW 352 488 Q96C24 A 1 4 140 352 488 3FDW 352 488 Q96C24 B 1 4 140 1 expression tag MET 349 3FDW A Q96C24 UNP 1 1 expression tag SER 350 3FDW A Q96C24 UNP 2 1 expression tag LEU 351 3FDW A Q96C24 UNP 3 1 expression tag GLU 489 3FDW A Q96C24 UNP 141 1 expression tag GLY 490 3FDW A Q96C24 UNP 142 1 expression tag HIS 491 3FDW A Q96C24 UNP 143 1 expression tag HIS 492 3FDW A Q96C24 UNP 144 1 expression tag HIS 493 3FDW A Q96C24 UNP 145 1 expression tag HIS 494 3FDW A Q96C24 UNP 146 1 expression tag HIS 495 3FDW A Q96C24 UNP 147 1 expression tag HIS 496 3FDW A Q96C24 UNP 148 2 expression tag MET 349 3FDW B Q96C24 UNP 1 2 expression tag SER 350 3FDW B Q96C24 UNP 2 2 expression tag LEU 351 3FDW B Q96C24 UNP 3 2 expression tag GLU 489 3FDW B Q96C24 UNP 141 2 expression tag GLY 490 3FDW B Q96C24 UNP 142 2 expression tag HIS 491 3FDW B Q96C24 UNP 143 2 expression tag HIS 492 3FDW B Q96C24 UNP 144 2 expression tag HIS 493 3FDW B Q96C24 UNP 145 2 expression tag HIS 494 3FDW B Q96C24 UNP 146 2 expression tag HIS 495 3FDW B Q96C24 UNP 147 2 expression tag HIS 496 3FDW B Q96C24 UNP 148 4 4 4 4 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A LEU 423 A LEU 75 A GLU 431 A GLU 83 A SER 372 A SER 24 A HIS 381 A HIS 33 A ARG 359 A ARG 11 A GLU 367 A GLU 19 A ASP 475 A ASP 127 A PRO 479 A PRO 131 A LYS 410 A LYS 62 A LYS 412 A LYS 64 A PRO 395 A PRO 47 A LEU 402 A LEU 54 A THR 441 A THR 93 A HIS 449 A HIS 101 A ASN 455 A ASN 107 A GLN 464 A GLN 116 B LEU 423 B LEU 75 B GLU 431 B GLU 83 B SER 372 B SER 24 B HIS 381 B HIS 33 B ARG 359 B ARG 11 B GLU 367 B GLU 19 B ASP 475 B ASP 127 B PRO 479 B PRO 131 B LYS 410 B LYS 62 B LYS 412 B LYS 64 B PRO 395 B PRO 47 B LEU 402 B LEU 54 B THR 441 B THR 93 B HIS 449 B HIS 101 B ASN 455 B ASN 107 B GLN 464 B GLN 116 4 P 1 21 1