0.025270 0.014589 0.000000 0.000000 0.029179 0.000000 0.000000 0.000000 0.012770 0.00000 0.00000 0.00000 Page, R. Brown, B.L. Arruda, J.M. Peti, W. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 39.573 39.573 78.306 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C6 H12 N2 O3 160.171 n N5-METHYLGLUTAMINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Plos Pathog. 1553-7366 5 e1000706 e1000706 10.1371/journal.ppat.1000706 20041169 Three dimensional structure of the MqsR:MqsA complex: a novel TA pair comprised of a toxin homologous to RelE and an antitoxin with unique properties 2009 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 100 1 Toroidal focusing mirror CCD 2008-07-18 ADSC QUANTUM 210 Toroidal focusing mirror CCD 2008-09-28 ADSC QUANTUM 210 Si (111) channel cut monochromator SINGLE WAVELENGTH M x-ray 1 Si (111) channel cut monochromator MAD M x-ray 1 1.0 1.0 0.9322 1.0 0.9794 1.0 0.9788 1.0 X6A NSLS 1.0 SYNCHROTRON NSLS BEAMLINE X6A X6A NSLS 0.9322, 0.9794, 0.9788 SYNCHROTRON NSLS BEAMLINE X6A 8125.364 HTH-type transcriptional regulator MQSA (ygiT/b3021) C-terminus (UNP residues 62 to 131) 1 man polymer 18.015 water 80 nat water no yes GHMASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNA(MEQ)PHPSTIKLLRVLDKHPELLNEIR GHMASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEIR A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n K12 sample b3021, JW2989, ygiT 83333 Escherichia coli K-12 562 Escherichia coli BL21 DE3 RIL plasmid RP1B 2 2.18 43.51 VAPOR DIFFUSION, SITTING DROP 8.5 20% PEG 300, 5% PEG 8000, 10% glycerol, 0.1M Tris, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K 277 VAPOR DIFFUSION, SITTING DROP 7.5 40% PEG 300, 0.1M Hepes, 0.2M NaCl, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K 277 repository Initial release Version format compliance 1 0 2010-01-12 1 1 2011-07-13 RCSB Y RCSB 2008-12-22 REL REL HOH water HOH 1 2 HOH HOH 1 A HOH 2 2 HOH HOH 2 A HOH 3 2 HOH HOH 3 A HOH 4 2 HOH HOH 4 A HOH 5 2 HOH HOH 5 A HOH 7 2 HOH HOH 7 A HOH 8 2 HOH HOH 8 A HOH 9 2 HOH HOH 9 A HOH 10 2 HOH HOH 10 A HOH 11 2 HOH HOH 11 A HOH 12 2 HOH HOH 12 A HOH 13 2 HOH HOH 13 A HOH 14 2 HOH HOH 14 A HOH 16 2 HOH HOH 16 A HOH 17 2 HOH HOH 17 A HOH 18 2 HOH HOH 18 A HOH 19 2 HOH HOH 19 A HOH 20 2 HOH HOH 20 A HOH 21 2 HOH HOH 21 A HOH 24 2 HOH HOH 24 A HOH 26 2 HOH HOH 26 A HOH 27 2 HOH HOH 27 A HOH 28 2 HOH HOH 28 A HOH 29 2 HOH HOH 29 A HOH 30 2 HOH HOH 30 A HOH 34 2 HOH HOH 34 A HOH 35 2 HOH HOH 35 A HOH 36 2 HOH HOH 36 A HOH 38 2 HOH HOH 38 A HOH 41 2 HOH HOH 41 A HOH 42 2 HOH HOH 42 A HOH 43 2 HOH HOH 43 A HOH 44 2 HOH HOH 44 A HOH 47 2 HOH HOH 47 A HOH 50 2 HOH HOH 50 A HOH 51 2 HOH HOH 51 A HOH 53 2 HOH HOH 53 A HOH 55 2 HOH HOH 55 A HOH 59 2 HOH HOH 132 A HOH 60 2 HOH HOH 133 A HOH 62 2 HOH HOH 134 A HOH 63 2 HOH HOH 135 A HOH 64 2 HOH HOH 136 A HOH 65 2 HOH HOH 137 A HOH 66 2 HOH HOH 138 A HOH 67 2 HOH HOH 139 A HOH 69 2 HOH HOH 140 A HOH 70 2 HOH HOH 141 A HOH 71 2 HOH HOH 142 A HOH 72 2 HOH HOH 143 A HOH 73 2 HOH HOH 144 A HOH 74 2 HOH HOH 145 A HOH 75 2 HOH HOH 146 A HOH 76 2 HOH HOH 147 A HOH 77 2 HOH HOH 148 A HOH 78 2 HOH HOH 149 A HOH 79 2 HOH HOH 150 A HOH 80 2 HOH HOH 151 A HOH 81 2 HOH HOH 152 A HOH 82 2 HOH HOH 153 A HOH 83 2 HOH HOH 154 A HOH 84 2 HOH HOH 155 A HOH 85 2 HOH HOH 156 A HOH 86 2 HOH HOH 157 A HOH 87 2 HOH HOH 158 A HOH 88 2 HOH HOH 159 A HOH 89 2 HOH HOH 160 A HOH 90 2 HOH HOH 161 A HOH 91 2 HOH HOH 162 A HOH 92 2 HOH HOH 163 A HOH 93 2 HOH HOH 164 A HOH 94 2 HOH HOH 165 A HOH 95 2 HOH HOH 166 A HOH 96 2 HOH HOH 167 A HOH 97 2 HOH HOH 168 A HOH 98 2 HOH HOH 169 A HOH 99 2 HOH HOH 170 A HOH 100 2 HOH HOH 171 A HOH 101 2 HOH HOH 172 A HOH 102 2 HOH HOH 173 A n 1 -2 A n 2 -1 A n 3 0 A n 4 62 A n 5 63 A n 6 64 A n 7 65 A ALA 66 n 8 ALA 66 A GLU 67 n 9 GLU 67 A THR 68 n 10 THR 68 A VAL 69 n 11 VAL 69 A ALA 70 n 12 ALA 70 A PRO 71 n 13 PRO 71 A GLU 72 n 14 GLU 72 A PHE 73 n 15 PHE 73 A ILE 74 n 16 ILE 74 A VAL 75 n 17 VAL 75 A LYS 76 n 18 LYS 76 A VAL 77 n 19 VAL 77 A ARG 78 n 20 ARG 78 A LYS 79 n 21 LYS 79 A LYS 80 n 22 LYS 80 A LEU 81 n 23 LEU 81 A SER 82 n 24 SER 82 A LEU 83 n 25 LEU 83 A THR 84 n 26 THR 84 A GLN 85 n 27 GLN 85 A LYS 86 n 28 LYS 86 A GLU 87 n 29 GLU 87 A ALA 88 n 30 ALA 88 A SER 89 n 31 SER 89 A GLU 90 n 32 GLU 90 A ILE 91 n 33 ILE 91 A PHE 92 n 34 PHE 92 A GLY 93 n 35 GLY 93 A GLY 94 n 36 GLY 94 A GLY 95 n 37 GLY 95 A VAL 96 n 38 VAL 96 A ASN 97 n 39 ASN 97 A ALA 98 n 40 ALA 98 A PHE 99 n 41 PHE 99 A SER 100 n 42 SER 100 A ARG 101 n 43 ARG 101 A TYR 102 n 44 TYR 102 A GLU 103 n 45 GLU 103 A LYS 104 n 46 LYS 104 A GLY 105 n 47 GLY 105 A ASN 106 n 48 ASN 106 A ALA 107 n 49 ALA 107 A MEQ 108 n 50 MEQ 108 A PRO 109 n 51 PRO 109 A HIS 110 n 52 HIS 110 A PRO 111 n 53 PRO 111 A SER 112 n 54 SER 112 A THR 113 n 55 THR 113 A ILE 114 n 56 ILE 114 A LYS 115 n 57 LYS 115 A LEU 116 n 58 LEU 116 A LEU 117 n 59 LEU 117 A ARG 118 n 60 ARG 118 A VAL 119 n 61 VAL 119 A LEU 120 n 62 LEU 120 A ASP 121 n 63 ASP 121 A LYS 122 n 64 LYS 122 A HIS 123 n 65 HIS 123 A PRO 124 n 66 PRO 124 A GLU 125 n 67 GLU 125 A LEU 126 n 68 LEU 126 A LEU 127 n 69 LEU 127 A ASN 128 n 70 ASN 128 A GLU 129 n 71 GLU 129 A ILE 130 n 72 ILE 130 A ARG 131 n 73 ARG 131 A author_and_software_defined_assembly PISA 2 dimeric 1600 -6 6760 A MEQ 108 N5-METHYLGLUTAMINE A MEQ 50 GLN 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -0.5000000000 0.8660254038 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 4_555 y,x,-z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 1 A HOH 160 B HOH 1 A GLY -2 A GLY 1 1 Y 1 A HIS -1 A HIS 2 1 Y 1 A MET 0 A MET 3 1 Y 1 A ALA 62 A ALA 4 1 Y 1 A SER 63 A SER 5 1 Y 1 A VAL 64 A VAL 6 1 Y 1 A ASN 65 A ASN 7 1 Y 1 A A OD2 O ASP HOH 121 163 2.18 12.155 0.02 0.01 0.00 0.02 0.00 -0.03 0.968 0.963 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.18151 0.15532 0.15654 1.40 20.77 716 14529 13813 4.9 99.71 1.525 0.029 RANDOM 1 THROUGHOUT MAD 0.063 0.056 0.80 0.80 1.20 MAXIMUM LIKELIHOOD MASK 1.40 20.77 80 651 0 0 571 0.011 0.022 590 0.001 0.020 424 1.413 2.007 809 0.935 3.000 1056 4.893 5.000 84 25.507 24.400 25 12.363 15.000 119 8.215 15.000 4 0.085 0.200 93 0.005 0.020 658 0.001 0.020 110 0.245 0.200 118 0.190 0.200 432 0.191 0.200 292 0.089 0.200 294 0.174 0.200 49 0.241 0.200 8 0.277 0.200 22 0.163 0.200 16 2.228 3.000 371 1.295 3.000 140 2.970 5.000 596 4.157 8.000 239 5.560 11.000 203 2.211 3.000 1077 5.727 3.000 80 3.252 3.000 995 0.197 0.143 1.436 58 993 20 99.53 1.40 50.0 3FMY 14613 14556 0 0 0.032 1,2 31.5 5.7 99.6 1.40 1.42 6.19 0.232 4.5 99.2 data collection HKL-2000 phasing SOLVE refinement REFMAC 5.2.0019 data reduction HKL-2000 data scaling HKL-2000 Uncharacterized HTH-type transcriptional regulator ygiT Structure of the C-terminal domain of the E. coli protein MQSA (YgiT/b3021) 1 N N 2 N N A ALA 70 A ALA 12 HELX_P A LEU 81 A LEU 23 1 1 12 A THR 84 A THR 26 HELX_P A GLY 93 A GLY 35 1 2 10 A ASN 97 A ASN 39 HELX_P A LYS 104 A LYS 46 1 3 8 A HIS 110 A HIS 52 HELX_P A HIS 123 A HIS 65 1 4 14 A LEU 126 A LEU 68 HELX_P A ARG 131 A ARG 73 1 5 6 covale 1.325 A ALA 107 A C ALA 49 1_555 A MEQ 108 A N MEQ 50 1_555 covale 1.350 A MEQ 108 A C MEQ 50 1_555 A PRO 109 A N PRO 51 1_555 DNA BINDING PROTEIN helix-turn-helix, DNA-binding, Transcription, Transcription regulation, DNA BINDING PROTEIN YGIT_ECOLI UNP 1 62 Q46864 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEIR 62 131 3FMY 62 131 Q46864 A 1 4 73 1 EXPRESSION TAG GLY -2 3FMY A Q46864 UNP 1 1 EXPRESSION TAG HIS -1 3FMY A Q46864 UNP 2 1 EXPRESSION TAG MET 0 3FMY A Q46864 UNP 3 152 P 31 2 1