0.011836 0.000000 0.000000 0.000000 0.011836 0.000000 0.000000 0.000000 0.016427 0.000000 0.000000 0.000000 Pakotiprapha, D. Verdine, G.L. Jeruzalmi, D. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.000 90.000 90.000 84.491 84.491 60.874 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 R C N 309 N O N 310 N C N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N C Y 330 N C Y 331 N C N 332 N O N 333 N O N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N N N 346 S C N 347 N C N 348 N O N 349 N C N 350 N C N 351 N C N 352 N O N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub N 322 N sing Y 323 N doub N 324 N sing Y 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N doub N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing US J.Biol.Chem. JBCHA3 0071 0021-9258 284 12837 12844 10.1074/jbc.M900571200 19287003 A Structural Model for the Damage-sensing Complex in Bacterial Nucleotide Excision Repair. 2009 10.2210/pdb3fpn/pdb pdb_00003fpn 100 1 2008-10-08 SINGLE WAVELENGTH M x-ray 1 0.97949 1.0 24-ID-C APS 0.97949 SYNCHROTRON APS BEAMLINE 24-ID-C 13347.542 Geobacillus stearothermophilus UvrA interaction domain 1 man polymer 12362.920 Geobacillus stearothermophilus UvrB interaction domain 1 man polymer 18.015 water 53 nat water no no GSHMTIEQMVDRLLSYPERTKMQILAPIVSGKKGTHAKTLEDIRKQGYVRVRIDREMRELTGDIELEKNKKHSIDVVVDR IIIKDGIAARLADSLETALKLADGKVVVDVIGEGELLFS GSHMTIEQMVDRLLSYPERTKMQILAPIVSGKKGTHAKTLEDIRKQGYVRVRIDREMRELTGDIELEKNKKHSIDVVVDR IIIKDGIAARLADSLETALKLADGKVVVDVIGEGELLFS A polypeptide(L) no no GSHMGSPEEYRELVVSLRVGMEIERNALLRRLVDIQYDRNDIDFRRGTFRVRGDVVEIFPASRDEHCIRVEFFGDEIERI REVDALTGEVLGEREHVAIFPASHFV GSHMGSPEEYRELVVSLRVGMEIERNALLRRLVDIQYDRNDIDFRRGTFRVRGDVVEIFPASRDEHCIRVEFFGDEIERI REVDALTGEVLGEREHVAIFPASHFV B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n 10 sample uvrA 1422 Geobacillus stearothermophilus 562 Escherichia coli BL21(DE3) plasmid pET28 10 sample uvrB 1422 Geobacillus stearothermophilus 562 Escherichia coli BL21(DE3) plasmid pET28 1 2.11 41.78 hanging drop vapor diffusion 5.0 PEG4000, NaCl, sodium acetate, Tris-HCl, pH 5.0, hanging drop vapor diffusion, temperature 295K 295 software chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_ref_seq struct_ref_seq_dif repository Initial release Version format compliance Refinement description Data collection Database references Refinement description 1 0 2009-03-24 1 1 2011-07-13 1 2 2017-11-01 1 3 2023-09-06 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end _struct_ref_seq_dif.details RCSB Y RCSB 2009-01-05 REL REL HOH water 2R6F PDB ENTRY 2R6F(residues 131-153 and 200-245, chain A), PDB ENTRY 1T5L (residues 157-250, chain A) PDB experimental model 1T5L PDB ENTRY 2R6F(residues 131-153 and 200-245, chain A), PDB ENTRY 1T5L (residues 157-250, chain A) PDB experimental model HOH 1 3 HOH HOH 1 A HOH 2 3 HOH HOH 2 A HOH 3 3 HOH HOH 3 A HOH 4 3 HOH HOH 4 A HOH 5 3 HOH HOH 5 A HOH 6 3 HOH HOH 6 A HOH 7 3 HOH HOH 7 A HOH 8 3 HOH HOH 8 A HOH 9 3 HOH HOH 9 A HOH 10 3 HOH HOH 10 A HOH 11 3 HOH HOH 11 A HOH 12 3 HOH HOH 12 A HOH 13 3 HOH HOH 13 A HOH 14 3 HOH HOH 14 A HOH 15 3 HOH HOH 15 A HOH 16 3 HOH HOH 16 A HOH 17 3 HOH HOH 17 A HOH 18 3 HOH HOH 18 A HOH 19 3 HOH HOH 19 A HOH 21 3 HOH HOH 21 A HOH 23 3 HOH HOH 23 A HOH 24 3 HOH HOH 24 A HOH 25 3 HOH HOH 25 A HOH 26 3 HOH HOH 26 A HOH 27 3 HOH HOH 27 A HOH 28 3 HOH HOH 28 A HOH 29 3 HOH HOH 29 A HOH 30 3 HOH HOH 30 A HOH 31 3 HOH HOH 31 A HOH 32 3 HOH HOH 32 A HOH 33 3 HOH HOH 33 A HOH 34 3 HOH HOH 34 A HOH 36 3 HOH HOH 36 A HOH 37 3 HOH HOH 37 A HOH 38 3 HOH HOH 38 A HOH 39 3 HOH HOH 39 A HOH 40 3 HOH HOH 40 A HOH 41 3 HOH HOH 41 A HOH 42 3 HOH HOH 42 A HOH 43 3 HOH HOH 43 A HOH 44 3 HOH HOH 44 A HOH 45 3 HOH HOH 45 A HOH 46 3 HOH HOH 46 A HOH 47 3 HOH HOH 47 A HOH 48 3 HOH HOH 48 A HOH 49 3 HOH HOH 49 A HOH 50 3 HOH HOH 50 A HOH 51 3 HOH HOH 51 A HOH 52 3 HOH HOH 52 A HOH 53 3 HOH HOH 53 A HOH 54 3 HOH HOH 54 A HOH 55 3 HOH HOH 55 A HOH 56 3 HOH HOH 56 A n 1 -4 A SER -3 n 2 SER -3 A HIS -2 n 3 HIS -2 A MET -1 n 4 MET -1 A THR 131 n 5 THR 131 A ILE 132 n 6 ILE 132 A GLU 133 n 7 GLU 133 A GLN 134 n 8 GLN 134 A MET 135 n 9 MET 135 A VAL 136 n 10 VAL 136 A ASP 137 n 11 ASP 137 A ARG 138 n 12 ARG 138 A LEU 139 n 13 LEU 139 A LEU 140 n 14 LEU 140 A SER 141 n 15 SER 141 A TYR 142 n 16 TYR 142 A PRO 143 n 17 PRO 143 A GLU 144 n 18 GLU 144 A ARG 145 n 19 ARG 145 A THR 146 n 20 THR 146 A LYS 147 n 21 LYS 147 A MET 148 n 22 MET 148 A GLN 149 n 23 GLN 149 A ILE 150 n 24 ILE 150 A LEU 151 n 25 LEU 151 A ALA 152 n 26 ALA 152 A PRO 153 n 27 PRO 153 A ILE 154 n 28 ILE 154 A VAL 155 n 29 VAL 155 A SER 156 n 30 SER 156 A GLY 157 n 31 GLY 157 A LYS 158 n 32 LYS 158 A LYS 159 n 33 LYS 159 A GLY 160 n 34 GLY 160 A THR 161 n 35 THR 161 A HIS 162 n 36 HIS 162 A ALA 163 n 37 ALA 163 A LYS 164 n 38 LYS 164 A THR 165 n 39 THR 165 A LEU 166 n 40 LEU 166 A GLU 167 n 41 GLU 167 A ASP 168 n 42 ASP 168 A ILE 169 n 43 ILE 169 A ARG 170 n 44 ARG 170 A LYS 171 n 45 LYS 171 A GLN 172 n 46 GLN 172 A GLY 173 n 47 GLY 173 A TYR 174 n 48 TYR 174 A VAL 175 n 49 VAL 175 A ARG 176 n 50 ARG 176 A VAL 177 n 51 VAL 177 A ARG 178 n 52 ARG 178 A ILE 179 n 53 ILE 179 A ASP 180 n 54 ASP 180 A ARG 181 n 55 ARG 181 A GLU 182 n 56 GLU 182 A MET 183 n 57 MET 183 A ARG 184 n 58 ARG 184 A GLU 185 n 59 GLU 185 A LEU 186 n 60 LEU 186 A THR 187 n 61 THR 187 A GLY 188 n 62 GLY 188 A ASP 189 n 63 ASP 189 A ILE 190 n 64 ILE 190 A GLU 191 n 65 GLU 191 A LEU 192 n 66 LEU 192 A GLU 193 n 67 GLU 193 A LYS 194 n 68 LYS 194 A ASN 195 n 69 ASN 195 A LYS 196 n 70 LYS 196 A LYS 197 n 71 LYS 197 A HIS 198 n 72 HIS 198 A SER 199 n 73 SER 199 A ILE 200 n 74 ILE 200 A ASP 201 n 75 ASP 201 A VAL 202 n 76 VAL 202 A VAL 203 n 77 VAL 203 A VAL 204 n 78 VAL 204 A ASP 205 n 79 ASP 205 A ARG 206 n 80 ARG 206 A ILE 207 n 81 ILE 207 A ILE 208 n 82 ILE 208 A ILE 209 n 83 ILE 209 A LYS 210 n 84 LYS 210 A ASP 211 n 85 ASP 211 A GLY 212 n 86 GLY 212 A ILE 213 n 87 ILE 213 A ALA 214 n 88 ALA 214 A ALA 215 n 89 ALA 215 A ARG 216 n 90 ARG 216 A LEU 217 n 91 LEU 217 A ALA 218 n 92 ALA 218 A ASP 219 n 93 ASP 219 A SER 220 n 94 SER 220 A LEU 221 n 95 LEU 221 A GLU 222 n 96 GLU 222 A THR 223 n 97 THR 223 A ALA 224 n 98 ALA 224 A LEU 225 n 99 LEU 225 A LYS 226 n 100 LYS 226 A LEU 227 n 101 LEU 227 A ALA 228 n 102 ALA 228 A ASP 229 n 103 ASP 229 A GLY 230 n 104 GLY 230 A LYS 231 n 105 LYS 231 A VAL 232 n 106 VAL 232 A VAL 233 n 107 VAL 233 A VAL 234 n 108 VAL 234 A ASP 235 n 109 ASP 235 A VAL 236 n 110 VAL 236 A ILE 237 n 111 ILE 237 A GLY 238 n 112 GLY 238 A GLU 239 n 113 GLU 239 A GLY 240 n 114 GLY 240 A GLU 241 n 115 GLU 241 A LEU 242 n 116 LEU 242 A LEU 243 n 117 LEU 243 A PHE 244 n 118 PHE 244 A SER 245 n 119 SER 245 A n 1 -4 B n 2 -3 B n 3 -2 B n 4 -1 B n 5 149 B n 6 150 B n 7 151 B n 8 152 B n 9 153 B n 10 154 B n 11 155 B n 12 156 B LEU 157 n 13 LEU 157 B VAL 158 n 14 VAL 158 B VAL 159 n 15 VAL 159 B SER 160 n 16 SER 160 B LEU 161 n 17 LEU 161 B ARG 162 n 18 ARG 162 B VAL 163 n 19 VAL 163 B GLY 164 n 20 GLY 164 B MET 165 n 21 MET 165 B GLU 166 n 22 GLU 166 B ILE 167 n 23 ILE 167 B GLU 168 n 24 GLU 168 B ARG 169 n 25 ARG 169 B ASN 170 n 26 ASN 170 B ALA 171 n 27 ALA 171 B LEU 172 n 28 LEU 172 B LEU 173 n 29 LEU 173 B ARG 174 n 30 ARG 174 B ARG 175 n 31 ARG 175 B LEU 176 n 32 LEU 176 B VAL 177 n 33 VAL 177 B ASP 178 n 34 ASP 178 B ILE 179 n 35 ILE 179 B GLN 180 n 36 GLN 180 B TYR 181 n 37 TYR 181 B ASP 182 n 38 ASP 182 B ARG 183 n 39 ARG 183 B ASN 184 n 40 ASN 184 B ASP 185 n 41 ASP 185 B ILE 186 n 42 ILE 186 B ASP 187 n 43 ASP 187 B PHE 188 n 44 PHE 188 B ARG 189 n 45 ARG 189 B ARG 190 n 46 ARG 190 B GLY 191 n 47 GLY 191 B THR 192 n 48 THR 192 B PHE 193 n 49 PHE 193 B ARG 194 n 50 ARG 194 B VAL 195 n 51 VAL 195 B ARG 196 n 52 ARG 196 B GLY 197 n 53 GLY 197 B ASP 198 n 54 ASP 198 B VAL 199 n 55 VAL 199 B VAL 200 n 56 VAL 200 B GLU 201 n 57 GLU 201 B ILE 202 n 58 ILE 202 B PHE 203 n 59 PHE 203 B PRO 204 n 60 PRO 204 B ALA 205 n 61 ALA 205 B SER 206 n 62 SER 206 B ARG 207 n 63 ARG 207 B ASP 208 n 64 ASP 208 B GLU 209 n 65 GLU 209 B HIS 210 n 66 HIS 210 B CYS 211 n 67 CYS 211 B ILE 212 n 68 ILE 212 B ARG 213 n 69 ARG 213 B VAL 214 n 70 VAL 214 B GLU 215 n 71 GLU 215 B PHE 216 n 72 PHE 216 B PHE 217 n 73 PHE 217 B GLY 218 n 74 GLY 218 B ASP 219 n 75 ASP 219 B GLU 220 n 76 GLU 220 B ILE 221 n 77 ILE 221 B GLU 222 n 78 GLU 222 B ARG 223 n 79 ARG 223 B ILE 224 n 80 ILE 224 B ARG 225 n 81 ARG 225 B GLU 226 n 82 GLU 226 B VAL 227 n 83 VAL 227 B ASP 228 n 84 ASP 228 B ALA 229 n 85 ALA 229 B LEU 230 n 86 LEU 230 B THR 231 n 87 THR 231 B GLY 232 n 88 GLY 232 B GLU 233 n 89 GLU 233 B VAL 234 n 90 VAL 234 B LEU 235 n 91 LEU 235 B GLY 236 n 92 GLY 236 B GLU 237 n 93 GLU 237 B ARG 238 n 94 ARG 238 B GLU 239 n 95 GLU 239 B HIS 240 n 96 HIS 240 B VAL 241 n 97 VAL 241 B ALA 242 n 98 ALA 242 B ILE 243 n 99 ILE 243 B PHE 244 n 100 PHE 244 B PRO 245 n 101 PRO 245 B ALA 246 n 102 ALA 246 B SER 247 n 103 SER 247 B HIS 248 n 104 HIS 248 B PHE 249 n 105 PHE 249 B VAL 250 n 106 VAL 250 B 6.0567 -1.5934 0.0665 2.9503 0.1828 2.3243 0.0270 0.0251 -0.1936 -0.1105 0.0176 -0.0564 0.1780 0.1913 -0.0447 -0.1505 -0.0302 0.0070 -0.1629 -0.0022 -0.1492 refined 3.2405 8.4054 13.4841 X-RAY DIFFRACTION 4.8255 0.1915 -0.7269 9.9514 1.5106 2.3909 -0.2635 -0.8454 -0.1710 1.2646 0.3933 -0.8342 0.3021 0.7493 -0.1298 0.0860 0.1253 -0.0798 0.2101 -0.0605 0.0527 refined 18.7761 3.7262 20.2899 X-RAY DIFFRACTION 5.3377 0.4733 0.0828 3.3100 0.5170 3.6641 -0.0461 0.1116 0.0836 -0.1159 0.0210 0.0358 0.0307 0.1397 0.0251 -0.1932 -0.0115 -0.0039 -0.1346 -0.0042 -0.1456 refined 3.3990 12.4807 13.9906 X-RAY DIFFRACTION 3.4274 -0.1527 1.8591 4.5546 0.2729 3.3612 -0.1255 0.3562 0.1510 -0.3477 0.1104 0.1095 -0.2542 0.0652 0.0152 -0.1207 -0.0509 -0.0004 -0.0461 -0.0041 -0.0799 refined 18.5063 28.6664 17.2026 X-RAY DIFFRACTION A 2 A 38 X-RAY DIFFRACTION 1 A 39 A 77 X-RAY DIFFRACTION 2 A 78 A 119 X-RAY DIFFRACTION 3 B 13 B 106 X-RAY DIFFRACTION 4 author_defined_assembly 2 dimeric software_defined_assembly PISA 1 monomeric software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O ARG 184 A O ARG 58 A N VAL 177 A N VAL 51 A N ARG 178 A N ARG 52 A O ASP 201 A O ASP 75 A O VAL 202 A O VAL 76 A N ALA 152 A N ALA 26 A N LEU 151 A N LEU 25 A O VAL 233 A O VAL 107 A N VAL 234 A N VAL 108 A O LEU 242 A O LEU 116 B N VAL 159 B N VAL 15 B O ILE 243 B O ILE 99 B N ASP 182 B N ASP 38 B O PHE 193 B O PHE 49 B N ARG 196 B N ARG 52 B O VAL 199 B O VAL 55 B N VAL 200 B N VAL 56 B O VAL 214 B O VAL 70 B N ARG 213 B N ARG 69 B O ARG 225 B O ARG 81 B N GLU 226 B N GLU 82 B O LEU 235 B O LEU 91 1 A GLY -4 A GLY 1 1 Y 1 B GLY -4 B GLY 1 1 Y 1 B SER -3 B SER 2 1 Y 1 B HIS -2 B HIS 3 1 Y 1 B MET -1 B MET 4 1 Y 1 B GLY 149 B GLY 5 1 Y 1 B SER 150 B SER 6 1 Y 1 B PRO 151 B PRO 7 1 Y 1 B GLU 152 B GLU 8 1 Y 1 B GLU 153 B GLU 9 1 Y 1 B TYR 154 B TYR 10 1 Y 1 B ARG 155 B ARG 11 1 Y 1 B GLU 156 B GLU 12 1 Y 1 3.86 0.50 120.30 124.16 B B B NE CZ NH1 ARG ARG ARG 223 223 223 N 1 -4.74 0.50 120.30 115.56 B B B NE CZ NH2 ARG ARG ARG 223 223 223 N 1 A ARG 145 81.56 -6.50 1 A ASP 189 59.42 73.88 1 A GLU 239 -128.48 -146.38 1 B ASP 208 71.22 -0.28 1 B ASP 219 -93.71 34.84 97.08 35.421 14.92 -0.500 0.000 0.000 -0.500 0.000 1.000 0.939 0.937 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.248 0.230 0.231 1.800 49.390 967 20522 4.700 97.900 1.00 1.00 6.197 0.096 RANDOM 1 THROUGHOUT 0.00 MOLECULAR REPLACEMENT 0.159 0.137 0.800 0.800 1.200 PDB ENTRY 2R6F(residues 131-153 and 200-245, chain A), PDB ENTRY 1T5L (residues 157-250, chain A) MAXIMUM LIKELIHOOD MASK 1.800 49.390 53 1757 0 0 1704 0.012 0.022 1723 1.367 1.976 2315 5.683 5.000 210 29.656 22.674 86 17.672 15.000 335 19.815 15.000 23 0.096 0.200 268 0.005 0.020 1279 0.634 1.500 1050 1.186 2.000 1703 2.028 3.000 673 3.403 4.500 612 0.316 0.239 1.847 68 1328 1396 20 92.210 1.800 50.000 3FPN 20904 0.043 1.077 1 70.679 14.200 99.900 0.443 1.80 1.83 1012 0.747 14.50 100.00 0.346 1.83 1.86 1016 0.759 14.50 100.00 0.278 1.86 1.90 1026 0.767 14.40 100.00 0.214 1.90 1.94 1037 0.797 14.50 100.00 0.180 1.94 1.98 1021 0.800 14.40 100.00 0.153 1.98 2.03 1028 0.840 14.40 100.00 0.116 2.03 2.08 1029 0.885 14.50 100.00 0.100 2.08 2.13 1032 0.897 14.50 100.00 0.086 2.13 2.20 1021 0.924 14.40 100.00 0.072 2.20 2.27 1045 0.931 14.40 100.00 0.064 2.27 2.35 1026 0.895 14.40 100.00 0.058 2.35 2.44 1041 0.900 14.40 100.00 0.053 2.44 2.55 1029 0.903 14.40 100.00 0.054 2.55 2.69 1044 1.076 14.30 100.00 0.058 2.69 2.86 1054 1.550 14.20 100.00 0.059 2.86 3.08 1056 2.122 14.00 100.00 0.056 3.08 3.39 1066 2.401 13.80 100.00 0.040 3.39 3.88 1067 1.659 13.70 100.00 0.024 3.88 4.88 1085 0.958 13.40 99.90 0.023 4.88 50.00 1169 0.749 12.70 98.40 data reduction Zbyszek Otwinowski hkl@hkl-xray.com http://www.hkl-xray.com/ DENZO package data scaling Zbyszek Otwinowski hkl@hkl-xray.com http://www.hkl-xray.com/ SCALEPACK package phasing Randy J. Read cimr-phaser@lists.cam.ac.uk http://www-structmed.cimr.cam.ac.uk/phaser/ PHASER program refinement Garib N. Murshudov garib@ysbl.york.ac.uk Fortran_77 http://www.ccp4.ac.uk/dist/html/refmac5.html REFMAC program 5.4.0066 data extraction PDB help@deposit.rcsb.org June 11, 2008 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.006 N Crystal structure of UvrA-UvrB interaction domains 1 N N 2 N N 3 N N A THR 131 A THR 5 HELX_P A SER 141 A SER 15 1 1 11 A HIS 162 A HIS 36 HELX_P A GLN 172 A GLN 46 1 2 11 A ILE 213 A ILE 87 HELX_P A ALA 228 A ALA 102 1 3 16 B GLU 168 B GLU 24 HELX_P B ILE 179 B ILE 35 1 4 12 DNA BINDING PROTEIN UvrA, UvrB, nucleotide excision repair, DNA repair, DNA BINDING PROTEIN 3FPN PDB 1 5 3FPN TIEQMVDRLLSYPERTKMQILAPIVSGKKGTHAKTLEDIRKQGYVRVRIDREMRELTGDIELEKNKKHSIDVVVDRIIIK DGIAARLADSLETALKLADGKVVVDVIGEGELLFS 3FPN PDB 2 5 3FPN GSPEEYRELVVSLRVGMEIERNALLRRLVDIQYDRNDIDFRRGTFRVRGDVVEIFPASRDEHCIRVEFFGDEIERIREVD ALTGEVLGEREHVAIFPASHFV 131 245 3FPN 131 245 3FPN A 1 5 119 149 250 3FPN 149 250 3FPN B 2 5 106 1 expression tag GLY -4 3FPN A 3FPN PDB 1 1 expression tag SER -3 3FPN A 3FPN PDB 2 1 expression tag HIS -2 3FPN A 3FPN PDB 3 1 expression tag MET -1 3FPN A 3FPN PDB 4 2 expression tag GLY -4 3FPN B 3FPN PDB 1 2 expression tag SER -3 3FPN B 3FPN PDB 2 2 expression tag HIS -2 3FPN B 3FPN PDB 3 2 expression tag MET -1 3FPN B 3FPN PDB 4 6 2 6 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel A GLU 182 A GLU 56 A GLU 185 A GLU 59 A ARG 176 A ARG 50 A ILE 179 A ILE 53 A HIS 198 A HIS 72 A ILE 208 A ILE 82 A LYS 147 A LYS 21 A LYS 158 A LYS 32 A VAL 232 A VAL 106 A VAL 236 A VAL 110 A GLU 241 A GLU 115 A PHE 244 A PHE 118 B VAL 159 B VAL 15 B ARG 162 B ARG 18 B HIS 240 B HIS 96 B ILE 243 B ILE 99 B ASP 182 B ASP 38 B ARG 183 B ARG 39 B THR 192 B THR 48 B ARG 196 B ARG 52 B VAL 199 B VAL 55 B PHE 203 B PHE 59 B CYS 211 B CYS 67 B PHE 217 B PHE 73 B GLU 220 B GLU 76 B VAL 227 B VAL 83 B VAL 234 B VAL 90 B ARG 238 B ARG 94 92 P 41 21 2