data_3FS0 # _entry.id 3FS0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3FS0 pdb_00003fs0 10.2210/pdb3fs0/pdb NDB AR0101 ? ? RCSB RCSB050969 ? ? WWPDB D_1000050969 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3FTM _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3FS0 _pdbx_database_status.recvd_initial_deposition_date 2009-01-08 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pitt, J.N.' 1 ;Ferre-D'Amare, A.R. ; 2 # _citation.id primary _citation.title 'Structure-guided engineering of the regioselectivity of RNA ligase ribozymes.' _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_volume 131 _citation.page_first 3532 _citation.page_last 3540 _citation.year 2009 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 0002-7863 _citation.journal_id_CSD 0004 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19220054 _citation.pdbx_database_id_DOI 10.1021/ja8067325 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pitt, J.N.' 1 ? primary ;Ferre-D'Amare, A.R. ; 2 ? # _cell.entry_id 3FS0 _cell.length_a 30.040 _cell.length_b 30.040 _cell.length_c 59.666 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 3 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3FS0 _symmetry.space_group_name_H-M 'P 31' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-R(*GP*GP*UP*GP*AP*GP*GP*CP*UP*G)-3'" 3272.996 1 ? ? ? 'template strand of Class II ligase A4-11' 2 polymer syn "5'-R(*CP*CP*AP*GP*UP*CP*GP*GP*AP*AP*C)-3'" 3505.170 1 ? ? ? ;Product strand of Class II ligase A4-11, single stranded RNA with one 2'-5' linkage ; 3 non-polymer syn 'MAGNESIUM ION' 24.305 5 ? ? ? ? 4 water nat water 18.015 12 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no GGUGAGGCUG GGUGAGGCUG A ? 2 polyribonucleotide no no CCAGUCGGAAC CCAGUCGGAAC B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 U n 1 4 G n 1 5 A n 1 6 G n 1 7 G n 1 8 C n 1 9 U n 1 10 G n 2 1 C n 2 2 C n 2 3 A n 2 4 G n 2 5 U n 2 6 C n 2 7 G n 2 8 G n 2 9 A n 2 10 A n 2 11 C n # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 GB U26406 1 GGUGAGGCUG 227 U26406 ? 2 PDB 3FS0 2 CCAGUCGGAAC 1 3FS0 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3FS0 A 1 ? 10 ? U25406 227 ? 236 ? 44 53 2 2 3FS0 B 1 ? 11 ? 3FS0 -6 ? 5 ? -6 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # _exptl.entry_id 3FS0 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.29 _exptl_crystal.density_percent_sol 46.36 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '0.2mM RNA duplex, 10mM MgCl2, 25% PEG 4000, 0.2M lithium sulfate, 100mM Tris 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 MgCl2 ? ? ? 1 2 1 'PEG 4000' ? ? ? 1 3 1 'lithium sulfate' ? ? ? 1 4 1 Tris ? ? ? 1 5 2 MgCl2 ? ? ? 1 6 2 'PEG 4000' ? ? ? 1 7 2 'lithium sulfate' ? ? ? 1 8 2 Tris ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2005-10-06 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 5.0.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 5.0.1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 3FS0 _reflns.observed_criterion_sigma_I 4 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30 _reflns.d_resolution_high 2.3 _reflns.number_obs 2663 _reflns.number_all ? _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.042 _reflns.pdbx_Rsym_value 0.042 _reflns.pdbx_netI_over_sigmaI 31.3 _reflns.B_iso_Wilson_estimate 29.5 _reflns.pdbx_redundancy 5.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.3 _reflns_shell.d_res_low 2.38 _reflns_shell.percent_possible_all 99.6 _reflns_shell.Rmerge_I_obs 0.307 _reflns_shell.pdbx_Rsym_value 0.307 _reflns_shell.meanI_over_sigI_obs 4.6 _reflns_shell.pdbx_redundancy 5.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 242 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3FS0 _refine.ls_number_reflns_obs 2653 _refine.ls_number_reflns_all 2661 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 436790.98 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 23.85 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs 99.7 _refine.ls_R_factor_obs 0.208 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.208 _refine.ls_R_factor_R_free 0.234 _refine.ls_R_factor_R_free_error 0.015 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.5 _refine.ls_number_reflns_R_free 252 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 43.4 _refine.aniso_B[1][1] 9.78 _refine.aniso_B[2][2] 9.78 _refine.aniso_B[3][3] -19.56 _refine.aniso_B[1][2] 10.50 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.3 _refine.solvent_model_param_bsol 25 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 3FTM' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3FS0 _refine_analyze.Luzzati_coordinate_error_obs 0.36 _refine_analyze.Luzzati_sigma_a_obs 0.44 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.44 _refine_analyze.Luzzati_sigma_a_free 0.44 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 449 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 12 _refine_hist.number_atoms_total 466 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 23.85 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 14.9 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.76 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.30 _refine_ls_shell.d_res_low 2.44 _refine_ls_shell.number_reflns_R_work 378 _refine_ls_shell.R_factor_R_work 0.360 _refine_ls_shell.percent_reflns_obs 99.8 _refine_ls_shell.R_factor_R_free 0.382 _refine_ls_shell.R_factor_R_free_error 0.062 _refine_ls_shell.percent_reflns_R_free 9.1 _refine_ls_shell.number_reflns_R_free 38 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 pitt.param pitt.top 'X-RAY DIFFRACTION' 3 water_rep.param water.top 'X-RAY DIFFRACTION' 4 ion.param ion.top 'X-RAY DIFFRACTION' # _struct.entry_id 3FS0 _struct.title 'Class II ligase ribozyme product-template duplex, structure 2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3FS0 _struct_keywords.pdbx_keywords RNA _struct_keywords.text ;ribozyme, ligase, 2'-5', 2-5, 2p5, RNA ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 4 ? I N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? B C 6 "O2'" ? ? ? 1_555 B G 7 P ? ? B C -1 B G 1 1_555 ? ? ? ? ? ? ? 1.604 ? ? hydrog1 hydrog ? ? A G 2 N1 ? ? ? 1_555 B C 11 N3 ? ? A G 45 B C 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 2 N2 ? ? ? 1_555 B C 11 O2 ? ? A G 45 B C 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 2 O6 ? ? ? 1_555 B C 11 N4 ? ? A G 45 B C 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A U 3 N3 ? ? ? 1_555 B A 10 N1 ? ? A U 46 B A 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A U 3 O4 ? ? ? 1_555 B A 10 N6 ? ? A U 46 B A 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A A 5 N6 ? ? ? 1_555 B G 7 N3 ? ? A A 48 B G 1 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog7 hydrog ? ? A A 5 N7 ? ? ? 1_555 B G 7 N2 ? ? A A 48 B G 1 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog8 hydrog ? ? A G 6 N1 ? ? ? 1_555 B C 6 N3 ? ? A G 49 B C -1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 6 N2 ? ? ? 1_555 B C 6 O2 ? ? A G 49 B C -1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 6 O6 ? ? ? 1_555 B C 6 N4 ? ? A G 49 B C -1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 7 N1 ? ? ? 1_555 B U 5 O2 ? ? A G 50 B U -2 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog12 hydrog ? ? A G 7 O6 ? ? ? 1_555 B U 5 N3 ? ? A G 50 B U -2 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog13 hydrog ? ? A C 8 N3 ? ? ? 1_555 B G 4 N1 ? ? A C 51 B G -3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A C 8 N4 ? ? ? 1_555 B G 4 O6 ? ? A C 51 B G -3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A C 8 O2 ? ? ? 1_555 B G 4 N2 ? ? A C 51 B G -3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A U 9 N3 ? ? ? 1_555 B A 3 N1 ? ? A U 52 B A -4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A U 9 O4 ? ? ? 1_555 B A 3 N6 ? ? A U 52 B A -4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 10 N1 ? ? ? 1_555 B C 2 N3 ? ? A G 53 B C -5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A G 10 N2 ? ? ? 1_555 B C 2 O2 ? ? A G 53 B C -5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 10 O6 ? ? ? 1_555 B C 2 N4 ? ? A G 53 B C -5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 103 ? 4 'BINDING SITE FOR RESIDUE MG A 103' AC2 Software B MG 108 ? 2 'BINDING SITE FOR RESIDUE MG B 108' AC3 Software B MG 109 ? 1 'BINDING SITE FOR RESIDUE MG B 109' AC4 Software B MG 104 ? 2 'BINDING SITE FOR RESIDUE MG B 104' AC5 Software B MG 140 ? 6 'BINDING SITE FOR RESIDUE MG B 140' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 A A 5 ? A A 48 . ? 1_555 ? 2 AC1 4 U A 9 ? U A 52 . ? 2_665 ? 3 AC1 4 G B 8 ? G B 2 . ? 1_555 ? 4 AC1 4 HOH I . ? HOH B 130 . ? 2_665 ? 5 AC2 2 U B 5 ? U B -2 . ? 1_555 ? 6 AC2 2 HOH I . ? HOH B 137 . ? 1_555 ? 7 AC3 1 A B 10 ? A B 4 . ? 1_555 ? 8 AC4 2 C B 1 ? C B -6 . ? 1_665 ? 9 AC4 2 C B 11 ? C B 5 . ? 1_555 ? 10 AC5 6 U A 3 ? U A 46 . ? 1_555 ? 11 AC5 6 G A 4 ? G A 47 . ? 1_555 ? 12 AC5 6 G B 8 ? G B 2 . ? 1_555 ? 13 AC5 6 A B 9 ? A B 3 . ? 1_555 ? 14 AC5 6 A B 10 ? A B 4 . ? 1_555 ? 15 AC5 6 HOH I . ? HOH B 112 . ? 1_555 ? # _database_PDB_matrix.entry_id 3FS0 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3FS0 _atom_sites.fract_transf_matrix[1][1] 0.033289 _atom_sites.fract_transf_matrix[1][2] 0.019219 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.038439 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016760 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . G A 1 1 ? 10.528 29.374 38.902 1.00 53.70 ? 44 G A "O5'" 1 ATOM 2 C "C5'" . G A 1 1 ? 11.034 28.785 37.700 1.00 48.27 ? 44 G A "C5'" 1 ATOM 3 C "C4'" . G A 1 1 ? 12.501 28.450 37.819 1.00 45.50 ? 44 G A "C4'" 1 ATOM 4 O "O4'" . G A 1 1 ? 13.211 29.620 38.300 1.00 43.55 ? 44 G A "O4'" 1 ATOM 5 C "C3'" . G A 1 1 ? 12.856 27.362 38.822 1.00 43.69 ? 44 G A "C3'" 1 ATOM 6 O "O3'" . G A 1 1 ? 12.738 26.068 38.246 1.00 45.27 ? 44 G A "O3'" 1 ATOM 7 C "C2'" . G A 1 1 ? 14.306 27.690 39.139 1.00 43.35 ? 44 G A "C2'" 1 ATOM 8 O "O2'" . G A 1 1 ? 15.205 27.263 38.136 1.00 38.52 ? 44 G A "O2'" 1 ATOM 9 C "C1'" . G A 1 1 ? 14.262 29.218 39.166 1.00 44.07 ? 44 G A "C1'" 1 ATOM 10 N N9 . G A 1 1 ? 13.999 29.751 40.503 1.00 44.09 ? 44 G A N9 1 ATOM 11 C C8 . G A 1 1 ? 12.887 30.443 40.920 1.00 44.29 ? 44 G A C8 1 ATOM 12 N N7 . G A 1 1 ? 12.947 30.803 42.174 1.00 44.87 ? 44 G A N7 1 ATOM 13 C C5 . G A 1 1 ? 14.168 30.314 42.615 1.00 42.97 ? 44 G A C5 1 ATOM 14 C C6 . G A 1 1 ? 14.780 30.396 43.890 1.00 41.91 ? 44 G A C6 1 ATOM 15 O O6 . G A 1 1 ? 14.352 30.935 44.913 1.00 41.96 ? 44 G A O6 1 ATOM 16 N N1 . G A 1 1 ? 16.020 29.768 43.903 1.00 42.53 ? 44 G A N1 1 ATOM 17 C C2 . G A 1 1 ? 16.599 29.141 42.826 1.00 41.89 ? 44 G A C2 1 ATOM 18 N N2 . G A 1 1 ? 17.809 28.597 43.034 1.00 42.31 ? 44 G A N2 1 ATOM 19 N N3 . G A 1 1 ? 16.035 29.053 41.632 1.00 40.99 ? 44 G A N3 1 ATOM 20 C C4 . G A 1 1 ? 14.830 29.661 41.598 1.00 42.20 ? 44 G A C4 1 ATOM 21 P P . G A 1 2 ? 12.431 24.802 39.185 1.00 44.65 ? 45 G A P 1 ATOM 22 O OP1 . G A 1 2 ? 12.327 23.597 38.323 1.00 47.25 ? 45 G A OP1 1 ATOM 23 O OP2 . G A 1 2 ? 11.284 25.180 40.056 1.00 46.07 ? 45 G A OP2 1 ATOM 24 O "O5'" . G A 1 2 ? 13.741 24.637 40.075 1.00 44.41 ? 45 G A "O5'" 1 ATOM 25 C "C5'" . G A 1 2 ? 14.947 24.118 39.509 1.00 43.65 ? 45 G A "C5'" 1 ATOM 26 C "C4'" . G A 1 2 ? 15.996 23.932 40.578 1.00 43.47 ? 45 G A "C4'" 1 ATOM 27 O "O4'" . G A 1 2 ? 16.248 25.211 41.217 1.00 44.84 ? 45 G A "O4'" 1 ATOM 28 C "C3'" . G A 1 2 ? 15.618 23.017 41.732 1.00 45.15 ? 45 G A "C3'" 1 ATOM 29 O "O3'" . G A 1 2 ? 15.843 21.647 41.393 1.00 46.44 ? 45 G A "O3'" 1 ATOM 30 C "C2'" . G A 1 2 ? 16.541 23.505 42.848 1.00 43.14 ? 45 G A "C2'" 1 ATOM 31 O "O2'" . G A 1 2 ? 17.866 23.024 42.743 1.00 43.60 ? 45 G A "O2'" 1 ATOM 32 C "C1'" . G A 1 2 ? 16.560 25.009 42.586 1.00 43.39 ? 45 G A "C1'" 1 ATOM 33 N N9 . G A 1 2 ? 15.622 25.781 43.401 1.00 43.98 ? 45 G A N9 1 ATOM 34 C C8 . G A 1 2 ? 14.425 26.331 43.009 1.00 43.42 ? 45 G A C8 1 ATOM 35 N N7 . G A 1 2 ? 13.833 27.003 43.957 1.00 42.38 ? 45 G A N7 1 ATOM 36 C C5 . G A 1 2 ? 14.684 26.879 45.047 1.00 43.34 ? 45 G A C5 1 ATOM 37 C C6 . G A 1 2 ? 14.569 27.396 46.368 1.00 43.40 ? 45 G A C6 1 ATOM 38 O O6 . G A 1 2 ? 13.659 28.088 46.851 1.00 39.87 ? 45 G A O6 1 ATOM 39 N N1 . G A 1 2 ? 15.656 27.026 47.155 1.00 44.20 ? 45 G A N1 1 ATOM 40 C C2 . G A 1 2 ? 16.715 26.251 46.731 1.00 47.43 ? 45 G A C2 1 ATOM 41 N N2 . G A 1 2 ? 17.668 25.987 47.644 1.00 48.35 ? 45 G A N2 1 ATOM 42 N N3 . G A 1 2 ? 16.833 25.767 45.504 1.00 46.12 ? 45 G A N3 1 ATOM 43 C C4 . G A 1 2 ? 15.789 26.120 44.722 1.00 44.58 ? 45 G A C4 1 ATOM 44 P P . U A 1 3 ? 14.849 20.514 41.958 1.00 46.36 ? 46 U A P 1 ATOM 45 O OP1 . U A 1 3 ? 15.216 19.211 41.346 1.00 46.32 ? 46 U A OP1 1 ATOM 46 O OP2 . U A 1 3 ? 13.453 21.020 41.829 1.00 41.68 ? 46 U A OP2 1 ATOM 47 O "O5'" . U A 1 3 ? 15.211 20.445 43.510 1.00 47.24 ? 46 U A "O5'" 1 ATOM 48 C "C5'" . U A 1 3 ? 16.511 20.048 43.949 1.00 47.87 ? 46 U A "C5'" 1 ATOM 49 C "C4'" . U A 1 3 ? 16.641 20.228 45.450 1.00 50.53 ? 46 U A "C4'" 1 ATOM 50 O "O4'" . U A 1 3 ? 16.629 21.642 45.780 1.00 52.46 ? 46 U A "O4'" 1 ATOM 51 C "C3'" . U A 1 3 ? 15.516 19.650 46.295 1.00 50.90 ? 46 U A "C3'" 1 ATOM 52 O "O3'" . U A 1 3 ? 15.699 18.252 46.499 1.00 49.40 ? 46 U A "O3'" 1 ATOM 53 C "C2'" . U A 1 3 ? 15.628 20.452 47.593 1.00 52.58 ? 46 U A "C2'" 1 ATOM 54 O "O2'" . U A 1 3 ? 16.571 19.959 48.526 1.00 53.79 ? 46 U A "O2'" 1 ATOM 55 C "C1'" . U A 1 3 ? 16.088 21.820 47.079 1.00 51.57 ? 46 U A "C1'" 1 ATOM 56 N N1 . U A 1 3 ? 15.000 22.810 47.028 1.00 50.84 ? 46 U A N1 1 ATOM 57 C C2 . U A 1 3 ? 14.834 23.612 48.141 1.00 49.84 ? 46 U A C2 1 ATOM 58 O O2 . U A 1 3 ? 15.571 23.554 49.115 1.00 52.38 ? 46 U A O2 1 ATOM 59 N N3 . U A 1 3 ? 13.781 24.488 48.076 1.00 48.11 ? 46 U A N3 1 ATOM 60 C C4 . U A 1 3 ? 12.896 24.651 47.038 1.00 48.66 ? 46 U A C4 1 ATOM 61 O O4 . U A 1 3 ? 11.972 25.465 47.155 1.00 47.80 ? 46 U A O4 1 ATOM 62 C C5 . U A 1 3 ? 13.141 23.802 45.909 1.00 48.95 ? 46 U A C5 1 ATOM 63 C C6 . U A 1 3 ? 14.161 22.931 45.941 1.00 49.54 ? 46 U A C6 1 ATOM 64 P P . G A 1 4 ? 14.428 17.269 46.464 1.00 50.36 ? 47 G A P 1 ATOM 65 O OP1 . G A 1 4 ? 14.921 15.897 46.778 1.00 50.83 ? 47 G A OP1 1 ATOM 66 O OP2 . G A 1 4 ? 13.699 17.506 45.192 1.00 47.03 ? 47 G A OP2 1 ATOM 67 O "O5'" . G A 1 4 ? 13.508 17.779 47.670 1.00 48.59 ? 47 G A "O5'" 1 ATOM 68 C "C5'" . G A 1 4 ? 14.005 17.806 49.014 1.00 46.61 ? 47 G A "C5'" 1 ATOM 69 C "C4'" . G A 1 4 ? 12.889 18.097 50.007 1.00 45.15 ? 47 G A "C4'" 1 ATOM 70 O "O4'" . G A 1 4 ? 12.365 19.440 49.807 1.00 44.82 ? 47 G A "O4'" 1 ATOM 71 C "C3'" . G A 1 4 ? 11.704 17.143 49.810 1.00 44.73 ? 47 G A "C3'" 1 ATOM 72 O "O3'" . G A 1 4 ? 11.161 16.794 51.086 1.00 48.35 ? 47 G A "O3'" 1 ATOM 73 C "C2'" . G A 1 4 ? 10.706 17.922 48.949 1.00 44.03 ? 47 G A "C2'" 1 ATOM 74 O "O2'" . G A 1 4 ? 9.350 17.676 49.249 1.00 40.52 ? 47 G A "O2'" 1 ATOM 75 C "C1'" . G A 1 4 ? 11.038 19.352 49.369 1.00 43.14 ? 47 G A "C1'" 1 ATOM 76 N N9 . G A 1 4 ? 10.630 20.522 48.602 1.00 43.95 ? 47 G A N9 1 ATOM 77 C C8 . G A 1 4 ? 9.870 21.558 49.087 1.00 44.72 ? 47 G A C8 1 ATOM 78 N N7 . G A 1 4 ? 9.536 22.423 48.174 1.00 45.22 ? 47 G A N7 1 ATOM 79 C C5 . G A 1 4 ? 10.135 21.946 47.019 1.00 45.38 ? 47 G A C5 1 ATOM 80 C C6 . G A 1 4 ? 10.113 22.461 45.714 1.00 45.40 ? 47 G A C6 1 ATOM 81 O O6 . G A 1 4 ? 9.533 23.467 45.298 1.00 48.81 ? 47 G A O6 1 ATOM 82 N N1 . G A 1 4 ? 10.861 21.677 44.843 1.00 46.30 ? 47 G A N1 1 ATOM 83 C C2 . G A 1 4 ? 11.543 20.536 45.192 1.00 45.10 ? 47 G A C2 1 ATOM 84 N N2 . G A 1 4 ? 12.219 19.925 44.207 1.00 43.99 ? 47 G A N2 1 ATOM 85 N N3 . G A 1 4 ? 11.562 20.036 46.416 1.00 44.49 ? 47 G A N3 1 ATOM 86 C C4 . G A 1 4 ? 10.840 20.787 47.273 1.00 44.46 ? 47 G A C4 1 ATOM 87 P P . A A 1 5 ? 11.088 15.270 51.581 1.00 49.22 ? 48 A A P 1 ATOM 88 O OP1 . A A 1 5 ? 12.399 14.938 52.204 1.00 45.08 ? 48 A A OP1 1 ATOM 89 O OP2 . A A 1 5 ? 10.552 14.421 50.474 1.00 48.55 ? 48 A A OP2 1 ATOM 90 O "O5'" . A A 1 5 ? 9.999 15.356 52.745 1.00 45.33 ? 48 A A "O5'" 1 ATOM 91 C "C5'" . A A 1 5 ? 8.621 15.599 52.449 1.00 43.31 ? 48 A A "C5'" 1 ATOM 92 C "C4'" . A A 1 5 ? 7.967 16.411 53.550 1.00 41.54 ? 48 A A "C4'" 1 ATOM 93 O "O4'" . A A 1 5 ? 8.418 17.799 53.482 1.00 40.25 ? 48 A A "O4'" 1 ATOM 94 C "C3'" . A A 1 5 ? 6.458 16.522 53.424 1.00 40.94 ? 48 A A "C3'" 1 ATOM 95 O "O3'" . A A 1 5 ? 5.798 15.403 53.982 1.00 42.15 ? 48 A A "O3'" 1 ATOM 96 C "C2'" . A A 1 5 ? 6.164 17.791 54.206 1.00 43.22 ? 48 A A "C2'" 1 ATOM 97 O "O2'" . A A 1 5 ? 6.164 17.598 55.608 1.00 43.88 ? 48 A A "O2'" 1 ATOM 98 C "C1'" . A A 1 5 ? 7.332 18.677 53.769 1.00 40.71 ? 48 A A "C1'" 1 ATOM 99 N N9 . A A 1 5 ? 6.983 19.423 52.550 1.00 40.47 ? 48 A A N9 1 ATOM 100 C C8 . A A 1 5 ? 7.483 19.254 51.285 1.00 39.60 ? 48 A A C8 1 ATOM 101 N N7 . A A 1 5 ? 6.924 20.028 50.385 1.00 38.88 ? 48 A A N7 1 ATOM 102 C C5 . A A 1 5 ? 6.003 20.770 51.109 1.00 39.15 ? 48 A A C5 1 ATOM 103 C C6 . A A 1 5 ? 5.088 21.783 50.729 1.00 39.43 ? 48 A A C6 1 ATOM 104 N N6 . A A 1 5 ? 4.944 22.226 49.473 1.00 37.66 ? 48 A A N6 1 ATOM 105 N N1 . A A 1 5 ? 4.320 22.329 51.697 1.00 37.98 ? 48 A A N1 1 ATOM 106 C C2 . A A 1 5 ? 4.468 21.883 52.952 1.00 38.94 ? 48 A A C2 1 ATOM 107 N N3 . A A 1 5 ? 5.290 20.942 53.428 1.00 38.10 ? 48 A A N3 1 ATOM 108 C C4 . A A 1 5 ? 6.038 20.420 52.445 1.00 38.56 ? 48 A A C4 1 ATOM 109 P P . G A 1 6 ? 4.738 14.593 53.093 1.00 45.67 ? 49 G A P 1 ATOM 110 O OP1 . G A 1 6 ? 4.095 13.537 53.919 1.00 47.40 ? 49 G A OP1 1 ATOM 111 O OP2 . G A 1 6 ? 5.455 14.214 51.854 1.00 44.85 ? 49 G A OP2 1 ATOM 112 O "O5'" . G A 1 6 ? 3.618 15.670 52.744 1.00 42.44 ? 49 G A "O5'" 1 ATOM 113 C "C5'" . G A 1 6 ? 2.846 16.273 53.774 1.00 41.51 ? 49 G A "C5'" 1 ATOM 114 C "C4'" . G A 1 6 ? 2.099 17.469 53.234 1.00 42.04 ? 49 G A "C4'" 1 ATOM 115 O "O4'" . G A 1 6 ? 3.059 18.374 52.625 1.00 44.29 ? 49 G A "O4'" 1 ATOM 116 C "C3'" . G A 1 6 ? 1.117 17.180 52.114 1.00 41.94 ? 49 G A "C3'" 1 ATOM 117 O "O3'" . G A 1 6 ? -0.149 16.762 52.614 1.00 43.62 ? 49 G A "O3'" 1 ATOM 118 C "C2'" . G A 1 6 ? 1.034 18.526 51.407 1.00 42.93 ? 49 G A "C2'" 1 ATOM 119 O "O2'" . G A 1 6 ? 0.216 19.468 52.071 1.00 42.95 ? 49 G A "O2'" 1 ATOM 120 C "C1'" . G A 1 6 ? 2.488 18.981 51.475 1.00 41.45 ? 49 G A "C1'" 1 ATOM 121 N N9 . G A 1 6 ? 3.276 18.602 50.300 1.00 38.55 ? 49 G A N9 1 ATOM 122 C C8 . G A 1 6 ? 4.325 17.715 50.249 1.00 38.02 ? 49 G A C8 1 ATOM 123 N N7 . G A 1 6 ? 4.851 17.611 49.057 1.00 35.83 ? 49 G A N7 1 ATOM 124 C C5 . G A 1 6 ? 4.098 18.474 48.271 1.00 34.33 ? 49 G A C5 1 ATOM 125 C C6 . G A 1 6 ? 4.196 18.775 46.892 1.00 33.61 ? 49 G A C6 1 ATOM 126 O O6 . G A 1 6 ? 4.993 18.317 46.066 1.00 28.50 ? 49 G A O6 1 ATOM 127 N N1 . G A 1 6 ? 3.235 19.709 46.500 1.00 32.65 ? 49 G A N1 1 ATOM 128 C C2 . G A 1 6 ? 2.296 20.277 47.338 1.00 33.25 ? 49 G A C2 1 ATOM 129 N N2 . G A 1 6 ? 1.451 21.174 46.794 1.00 30.97 ? 49 G A N2 1 ATOM 130 N N3 . G A 1 6 ? 2.192 19.990 48.620 1.00 32.38 ? 49 G A N3 1 ATOM 131 C C4 . G A 1 6 ? 3.118 19.090 49.019 1.00 34.82 ? 49 G A C4 1 ATOM 132 P P . G A 1 7 ? -1.132 15.908 51.671 1.00 44.13 ? 50 G A P 1 ATOM 133 O OP1 . G A 1 7 ? -2.319 15.478 52.449 1.00 44.60 ? 50 G A OP1 1 ATOM 134 O OP2 . G A 1 7 ? -0.299 14.883 50.977 1.00 43.91 ? 50 G A OP2 1 ATOM 135 O "O5'" . G A 1 7 ? -1.610 16.969 50.587 1.00 41.70 ? 50 G A "O5'" 1 ATOM 136 C "C5'" . G A 1 7 ? -2.428 18.070 50.951 1.00 41.91 ? 50 G A "C5'" 1 ATOM 137 C "C4'" . G A 1 7 ? -2.908 18.786 49.712 1.00 40.47 ? 50 G A "C4'" 1 ATOM 138 O "O4'" . G A 1 7 ? -1.768 19.399 49.053 1.00 40.74 ? 50 G A "O4'" 1 ATOM 139 C "C3'" . G A 1 7 ? -3.484 17.893 48.625 1.00 40.94 ? 50 G A "C3'" 1 ATOM 140 O "O3'" . G A 1 7 ? -4.833 17.499 48.856 1.00 42.27 ? 50 G A "O3'" 1 ATOM 141 C "C2'" . G A 1 7 ? -3.338 18.773 47.399 1.00 38.61 ? 50 G A "C2'" 1 ATOM 142 O "O2'" . G A 1 7 ? -4.302 19.812 47.335 1.00 38.62 ? 50 G A "O2'" 1 ATOM 143 C "C1'" . G A 1 7 ? -1.957 19.370 47.647 1.00 36.80 ? 50 G A "C1'" 1 ATOM 144 N N9 . G A 1 7 ? -0.881 18.596 47.029 1.00 34.66 ? 50 G A N9 1 ATOM 145 C C8 . G A 1 7 ? -0.007 17.715 47.629 1.00 32.67 ? 50 G A C8 1 ATOM 146 N N7 . G A 1 7 ? 0.865 17.212 46.797 1.00 29.26 ? 50 G A N7 1 ATOM 147 C C5 . G A 1 7 ? 0.543 17.786 45.573 1.00 31.04 ? 50 G A C5 1 ATOM 148 C C6 . G A 1 7 ? 1.144 17.632 44.282 1.00 31.03 ? 50 G A C6 1 ATOM 149 O O6 . G A 1 7 ? 2.117 16.938 43.959 1.00 28.79 ? 50 G A O6 1 ATOM 150 N N1 . G A 1 7 ? 0.491 18.401 43.318 1.00 30.29 ? 50 G A N1 1 ATOM 151 C C2 . G A 1 7 ? -0.599 19.213 43.555 1.00 31.14 ? 50 G A C2 1 ATOM 152 N N2 . G A 1 7 ? -1.104 19.872 42.501 1.00 26.68 ? 50 G A N2 1 ATOM 153 N N3 . G A 1 7 ? -1.157 19.367 44.744 1.00 31.38 ? 50 G A N3 1 ATOM 154 C C4 . G A 1 7 ? -0.539 18.632 45.699 1.00 31.65 ? 50 G A C4 1 ATOM 155 P P . C A 1 8 ? -5.348 16.091 48.277 1.00 45.06 ? 51 C A P 1 ATOM 156 O OP1 . C A 1 8 ? -6.763 15.898 48.717 1.00 45.93 ? 51 C A OP1 1 ATOM 157 O OP2 . C A 1 8 ? -4.324 15.056 48.615 1.00 45.72 ? 51 C A OP2 1 ATOM 158 O "O5'" . C A 1 8 ? -5.295 16.292 46.694 1.00 46.42 ? 51 C A "O5'" 1 ATOM 159 C "C5'" . C A 1 8 ? -6.202 17.170 46.025 1.00 45.40 ? 51 C A "C5'" 1 ATOM 160 C "C4'" . C A 1 8 ? -5.898 17.216 44.540 1.00 45.14 ? 51 C A "C4'" 1 ATOM 161 O "O4'" . C A 1 8 ? -4.532 17.692 44.362 1.00 45.11 ? 51 C A "O4'" 1 ATOM 162 C "C3'" . C A 1 8 ? -5.917 15.892 43.779 1.00 44.32 ? 51 C A "C3'" 1 ATOM 163 O "O3'" . C A 1 8 ? -7.224 15.497 43.368 1.00 42.26 ? 51 C A "O3'" 1 ATOM 164 C "C2'" . C A 1 8 ? -5.046 16.217 42.572 1.00 45.82 ? 51 C A "C2'" 1 ATOM 165 O "O2'" . C A 1 8 ? -5.734 16.954 41.574 1.00 46.79 ? 51 C A "O2'" 1 ATOM 166 C "C1'" . C A 1 8 ? -3.959 17.084 43.214 1.00 45.00 ? 51 C A "C1'" 1 ATOM 167 N N1 . C A 1 8 ? -2.793 16.285 43.632 1.00 43.59 ? 51 C A N1 1 ATOM 168 C C2 . C A 1 8 ? -1.866 15.882 42.657 1.00 44.30 ? 51 C A C2 1 ATOM 169 O O2 . C A 1 8 ? -2.050 16.221 41.475 1.00 46.73 ? 51 C A O2 1 ATOM 170 N N3 . C A 1 8 ? -0.800 15.132 43.027 1.00 41.93 ? 51 C A N3 1 ATOM 171 C C4 . C A 1 8 ? -0.639 14.785 44.307 1.00 41.91 ? 51 C A C4 1 ATOM 172 N N4 . C A 1 8 ? 0.415 14.040 44.624 1.00 39.36 ? 51 C A N4 1 ATOM 173 C C5 . C A 1 8 ? -1.559 15.185 45.318 1.00 42.68 ? 51 C A C5 1 ATOM 174 C C6 . C A 1 8 ? -2.612 15.929 44.940 1.00 43.31 ? 51 C A C6 1 ATOM 175 P P . U A 1 9 ? -7.558 13.929 43.140 1.00 43.72 ? 52 U A P 1 ATOM 176 O OP1 . U A 1 9 ? -9.029 13.808 42.945 1.00 43.25 ? 52 U A OP1 1 ATOM 177 O OP2 . U A 1 9 ? -6.889 13.109 44.192 1.00 42.03 ? 52 U A OP2 1 ATOM 178 O "O5'" . U A 1 9 ? -6.829 13.563 41.770 1.00 43.47 ? 52 U A "O5'" 1 ATOM 179 C "C5'" . U A 1 9 ? -7.252 14.124 40.535 1.00 40.31 ? 52 U A "C5'" 1 ATOM 180 C "C4'" . U A 1 9 ? -6.338 13.674 39.424 1.00 42.57 ? 52 U A "C4'" 1 ATOM 181 O "O4'" . U A 1 9 ? -4.989 14.184 39.658 1.00 39.92 ? 52 U A "O4'" 1 ATOM 182 C "C3'" . U A 1 9 ? -6.121 12.175 39.327 1.00 42.77 ? 52 U A "C3'" 1 ATOM 183 O "O3'" . U A 1 9 ? -7.199 11.497 38.706 1.00 46.34 ? 52 U A "O3'" 1 ATOM 184 C "C2'" . U A 1 9 ? -4.831 12.124 38.523 1.00 42.98 ? 52 U A "C2'" 1 ATOM 185 O "O2'" . U A 1 9 ? -5.004 12.482 37.163 1.00 43.58 ? 52 U A "O2'" 1 ATOM 186 C "C1'" . U A 1 9 ? -4.033 13.223 39.222 1.00 41.04 ? 52 U A "C1'" 1 ATOM 187 N N1 . U A 1 9 ? -3.296 12.709 40.393 1.00 38.82 ? 52 U A N1 1 ATOM 188 C C2 . U A 1 9 ? -2.082 12.085 40.167 1.00 37.16 ? 52 U A C2 1 ATOM 189 O O2 . U A 1 9 ? -1.605 11.936 39.055 1.00 37.64 ? 52 U A O2 1 ATOM 190 N N3 . U A 1 9 ? -1.444 11.637 41.292 1.00 36.81 ? 52 U A N3 1 ATOM 191 C C4 . U A 1 9 ? -1.877 11.745 42.598 1.00 39.21 ? 52 U A C4 1 ATOM 192 O O4 . U A 1 9 ? -1.167 11.313 43.512 1.00 38.01 ? 52 U A O4 1 ATOM 193 C C5 . U A 1 9 ? -3.142 12.391 42.752 1.00 38.64 ? 52 U A C5 1 ATOM 194 C C6 . U A 1 9 ? -3.792 12.839 41.672 1.00 39.27 ? 52 U A C6 1 ATOM 195 P P . G A 1 10 ? -7.494 9.963 39.091 1.00 50.76 ? 53 G A P 1 ATOM 196 O OP1 . G A 1 10 ? -8.777 9.575 38.457 1.00 51.92 ? 53 G A OP1 1 ATOM 197 O OP2 . G A 1 10 ? -7.307 9.769 40.555 1.00 50.66 ? 53 G A OP2 1 ATOM 198 O "O5'" . G A 1 10 ? -6.324 9.155 38.381 1.00 49.19 ? 53 G A "O5'" 1 ATOM 199 C "C5'" . G A 1 10 ? -6.151 9.218 36.976 1.00 46.80 ? 53 G A "C5'" 1 ATOM 200 C "C4'" . G A 1 10 ? -4.851 8.564 36.588 1.00 44.69 ? 53 G A "C4'" 1 ATOM 201 O "O4'" . G A 1 10 ? -3.764 9.243 37.261 1.00 42.26 ? 53 G A "O4'" 1 ATOM 202 C "C3'" . G A 1 10 ? -4.674 7.118 37.015 1.00 44.08 ? 53 G A "C3'" 1 ATOM 203 O "O3'" . G A 1 10 ? -5.395 6.161 36.227 1.00 45.92 ? 53 G A "O3'" 1 ATOM 204 C "C2'" . G A 1 10 ? -3.162 6.961 36.957 1.00 43.61 ? 53 G A "C2'" 1 ATOM 205 O "O2'" . G A 1 10 ? -2.667 6.759 35.644 1.00 44.66 ? 53 G A "O2'" 1 ATOM 206 C "C1'" . G A 1 10 ? -2.706 8.327 37.475 1.00 42.74 ? 53 G A "C1'" 1 ATOM 207 N N9 . G A 1 10 ? -2.368 8.311 38.894 1.00 43.12 ? 53 G A N9 1 ATOM 208 C C8 . G A 1 10 ? -3.054 8.881 39.944 1.00 42.89 ? 53 G A C8 1 ATOM 209 N N7 . G A 1 10 ? -2.470 8.691 41.099 1.00 40.95 ? 53 G A N7 1 ATOM 210 C C5 . G A 1 10 ? -1.337 7.951 40.791 1.00 42.34 ? 53 G A C5 1 ATOM 211 C C6 . G A 1 10 ? -0.315 7.456 41.624 1.00 43.47 ? 53 G A C6 1 ATOM 212 O O6 . G A 1 10 ? -0.191 7.578 42.847 1.00 46.30 ? 53 G A O6 1 ATOM 213 N N1 . G A 1 10 ? 0.639 6.754 40.897 1.00 44.87 ? 53 G A N1 1 ATOM 214 C C2 . G A 1 10 ? 0.616 6.557 39.537 1.00 42.78 ? 53 G A C2 1 ATOM 215 N N2 . G A 1 10 ? 1.626 5.842 39.013 1.00 41.50 ? 53 G A N2 1 ATOM 216 N N3 . G A 1 10 ? -0.325 7.021 38.750 1.00 42.21 ? 53 G A N3 1 ATOM 217 C C4 . G A 1 10 ? -1.264 7.704 39.437 1.00 43.21 ? 53 G A C4 1 ATOM 218 O "O5'" . C B 2 1 ? 7.138 4.489 50.258 1.00 58.78 ? -6 C B "O5'" 1 ATOM 219 C "C5'" . C B 2 1 ? 8.044 3.448 49.868 1.00 57.28 ? -6 C B "C5'" 1 ATOM 220 C "C4'" . C B 2 1 ? 7.696 2.818 48.536 1.00 56.48 ? -6 C B "C4'" 1 ATOM 221 O "O4'" . C B 2 1 ? 6.340 2.297 48.580 1.00 53.97 ? -6 C B "O4'" 1 ATOM 222 C "C3'" . C B 2 1 ? 7.668 3.755 47.338 1.00 55.81 ? -6 C B "C3'" 1 ATOM 223 O "O3'" . C B 2 1 ? 8.965 3.987 46.814 1.00 55.85 ? -6 C B "O3'" 1 ATOM 224 C "C2'" . C B 2 1 ? 6.812 2.975 46.353 1.00 55.49 ? -6 C B "C2'" 1 ATOM 225 O "O2'" . C B 2 1 ? 7.525 1.937 45.708 1.00 56.04 ? -6 C B "O2'" 1 ATOM 226 C "C1'" . C B 2 1 ? 5.756 2.387 47.288 1.00 53.88 ? -6 C B "C1'" 1 ATOM 227 N N1 . C B 2 1 ? 4.552 3.233 47.364 1.00 52.35 ? -6 C B N1 1 ATOM 228 C C2 . C B 2 1 ? 3.535 3.029 46.427 1.00 51.70 ? -6 C B C2 1 ATOM 229 O O2 . C B 2 1 ? 3.682 2.146 45.562 1.00 49.35 ? -6 C B O2 1 ATOM 230 N N3 . C B 2 1 ? 2.419 3.793 46.483 1.00 51.41 ? -6 C B N3 1 ATOM 231 C C4 . C B 2 1 ? 2.297 4.730 47.426 1.00 51.79 ? -6 C B C4 1 ATOM 232 N N4 . C B 2 1 ? 1.175 5.459 47.443 1.00 50.51 ? -6 C B N4 1 ATOM 233 C C5 . C B 2 1 ? 3.319 4.963 48.392 1.00 51.88 ? -6 C B C5 1 ATOM 234 C C6 . C B 2 1 ? 4.420 4.200 48.324 1.00 52.07 ? -6 C B C6 1 ATOM 235 P P . C B 2 2 ? 9.216 5.253 45.862 1.00 55.67 ? -5 C B P 1 ATOM 236 O OP1 . C B 2 2 ? 10.683 5.375 45.646 1.00 54.85 ? -5 C B OP1 1 ATOM 237 O OP2 . C B 2 2 ? 8.453 6.403 46.415 1.00 54.04 ? -5 C B OP2 1 ATOM 238 O "O5'" . C B 2 2 ? 8.512 4.836 44.495 1.00 55.56 ? -5 C B "O5'" 1 ATOM 239 C "C5'" . C B 2 2 ? 9.060 3.814 43.666 1.00 55.47 ? -5 C B "C5'" 1 ATOM 240 C "C4'" . C B 2 2 ? 8.291 3.721 42.366 1.00 54.49 ? -5 C B "C4'" 1 ATOM 241 O "O4'" . C B 2 2 ? 6.919 3.322 42.648 1.00 53.00 ? -5 C B "O4'" 1 ATOM 242 C "C3'" . C B 2 2 ? 8.126 5.018 41.585 1.00 54.12 ? -5 C B "C3'" 1 ATOM 243 O "O3'" . C B 2 2 ? 9.269 5.348 40.805 1.00 55.46 ? -5 C B "O3'" 1 ATOM 244 C "C2'" . C B 2 2 ? 6.923 4.694 40.715 1.00 53.28 ? -5 C B "C2'" 1 ATOM 245 O "O2'" . C B 2 2 ? 7.268 3.833 39.644 1.00 52.25 ? -5 C B "O2'" 1 ATOM 246 C "C1'" . C B 2 2 ? 6.040 3.945 41.717 1.00 50.87 ? -5 C B "C1'" 1 ATOM 247 N N1 . C B 2 2 ? 5.109 4.828 42.456 1.00 47.29 ? -5 C B N1 1 ATOM 248 C C2 . C B 2 2 ? 3.917 5.243 41.835 1.00 45.70 ? -5 C B C2 1 ATOM 249 O O2 . C B 2 2 ? 3.673 4.876 40.676 1.00 43.21 ? -5 C B O2 1 ATOM 250 N N3 . C B 2 2 ? 3.062 6.035 42.518 1.00 44.10 ? -5 C B N3 1 ATOM 251 C C4 . C B 2 2 ? 3.358 6.424 43.762 1.00 43.49 ? -5 C B C4 1 ATOM 252 N N4 . C B 2 2 ? 2.484 7.211 44.401 1.00 40.11 ? -5 C B N4 1 ATOM 253 C C5 . C B 2 2 ? 4.559 6.028 44.407 1.00 44.15 ? -5 C B C5 1 ATOM 254 C C6 . C B 2 2 ? 5.395 5.236 43.728 1.00 46.94 ? -5 C B C6 1 ATOM 255 P P . A B 2 3 ? 9.723 6.888 40.679 1.00 57.52 ? -4 A B P 1 ATOM 256 O OP1 . A B 2 3 ? 11.054 6.907 40.019 1.00 57.18 ? -4 A B OP1 1 ATOM 257 O OP2 . A B 2 3 ? 9.550 7.547 42.007 1.00 56.14 ? -4 A B OP2 1 ATOM 258 O "O5'" . A B 2 3 ? 8.644 7.546 39.704 1.00 54.22 ? -4 A B "O5'" 1 ATOM 259 C "C5'" . A B 2 3 ? 8.593 7.189 38.328 1.00 48.27 ? -4 A B "C5'" 1 ATOM 260 C "C4'" . A B 2 3 ? 7.317 7.695 37.691 1.00 43.61 ? -4 A B "C4'" 1 ATOM 261 O "O4'" . A B 2 3 ? 6.176 7.194 38.441 1.00 40.19 ? -4 A B "O4'" 1 ATOM 262 C "C3'" . A B 2 3 ? 7.071 9.194 37.702 1.00 41.86 ? -4 A B "C3'" 1 ATOM 263 O "O3'" . A B 2 3 ? 7.842 9.906 36.735 1.00 40.92 ? -4 A B "O3'" 1 ATOM 264 C "C2'" . A B 2 3 ? 5.572 9.247 37.426 1.00 40.32 ? -4 A B "C2'" 1 ATOM 265 O "O2'" . A B 2 3 ? 5.201 8.981 36.083 1.00 39.00 ? -4 A B "O2'" 1 ATOM 266 C "C1'" . A B 2 3 ? 5.083 8.089 38.291 1.00 39.75 ? -4 A B "C1'" 1 ATOM 267 N N9 . A B 2 3 ? 4.623 8.536 39.608 1.00 36.32 ? -4 A B N9 1 ATOM 268 C C8 . A B 2 3 ? 5.258 8.483 40.822 1.00 36.31 ? -4 A B C8 1 ATOM 269 N N7 . A B 2 3 ? 4.555 8.990 41.807 1.00 36.02 ? -4 A B N7 1 ATOM 270 C C5 . A B 2 3 ? 3.378 9.399 41.200 1.00 36.91 ? -4 A B C5 1 ATOM 271 C C6 . A B 2 3 ? 2.217 10.013 41.699 1.00 36.58 ? -4 A B C6 1 ATOM 272 N N6 . A B 2 3 ? 2.032 10.325 42.975 1.00 35.13 ? -4 A B N6 1 ATOM 273 N N1 . A B 2 3 ? 1.235 10.295 40.824 1.00 38.85 ? -4 A B N1 1 ATOM 274 C C2 . A B 2 3 ? 1.410 9.973 39.540 1.00 36.83 ? -4 A B C2 1 ATOM 275 N N3 . A B 2 3 ? 2.445 9.395 38.952 1.00 35.27 ? -4 A B N3 1 ATOM 276 C C4 . A B 2 3 ? 3.408 9.129 39.847 1.00 36.40 ? -4 A B C4 1 ATOM 277 P P . G B 2 4 ? 8.157 11.468 36.974 1.00 43.11 ? -3 G B P 1 ATOM 278 O OP1 . G B 2 4 ? 9.250 11.892 36.068 1.00 43.26 ? -3 G B OP1 1 ATOM 279 O OP2 . G B 2 4 ? 8.303 11.683 38.441 1.00 42.37 ? -3 G B OP2 1 ATOM 280 O "O5'" . G B 2 4 ? 6.822 12.189 36.501 1.00 40.50 ? -3 G B "O5'" 1 ATOM 281 C "C5'" . G B 2 4 ? 6.258 11.884 35.235 1.00 40.10 ? -3 G B "C5'" 1 ATOM 282 C "C4'" . G B 2 4 ? 4.890 12.489 35.116 1.00 39.75 ? -3 G B "C4'" 1 ATOM 283 O "O4'" . G B 2 4 ? 3.980 11.853 36.054 1.00 40.07 ? -3 G B "O4'" 1 ATOM 284 C "C3'" . G B 2 4 ? 4.814 13.960 35.476 1.00 41.66 ? -3 G B "C3'" 1 ATOM 285 O "O3'" . G B 2 4 ? 5.261 14.783 34.405 1.00 40.93 ? -3 G B "O3'" 1 ATOM 286 C "C2'" . G B 2 4 ? 3.333 14.122 35.810 1.00 40.57 ? -3 G B "C2'" 1 ATOM 287 O "O2'" . G B 2 4 ? 2.511 14.182 34.661 1.00 40.70 ? -3 G B "O2'" 1 ATOM 288 C "C1'" . G B 2 4 ? 3.055 12.814 36.551 1.00 39.22 ? -3 G B "C1'" 1 ATOM 289 N N9 . G B 2 4 ? 3.202 12.900 38.006 1.00 38.90 ? -3 G B N9 1 ATOM 290 C C8 . G B 2 4 ? 4.247 12.431 38.773 1.00 38.69 ? -3 G B C8 1 ATOM 291 N N7 . G B 2 4 ? 4.058 12.594 40.055 1.00 37.71 ? -3 G B N7 1 ATOM 292 C C5 . G B 2 4 ? 2.823 13.222 40.143 1.00 37.30 ? -3 G B C5 1 ATOM 293 C C6 . G B 2 4 ? 2.080 13.639 41.282 1.00 36.62 ? -3 G B C6 1 ATOM 294 O O6 . G B 2 4 ? 2.369 13.522 42.480 1.00 37.39 ? -3 G B O6 1 ATOM 295 N N1 . G B 2 4 ? 0.880 14.245 40.917 1.00 35.08 ? -3 G B N1 1 ATOM 296 C C2 . G B 2 4 ? 0.443 14.421 39.629 1.00 34.00 ? -3 G B C2 1 ATOM 297 N N2 . G B 2 4 ? -0.745 15.028 39.484 1.00 28.96 ? -3 G B N2 1 ATOM 298 N N3 . G B 2 4 ? 1.120 14.030 38.560 1.00 35.11 ? -3 G B N3 1 ATOM 299 C C4 . G B 2 4 ? 2.291 13.440 38.888 1.00 37.34 ? -3 G B C4 1 ATOM 300 P P . U B 2 5 ? 5.468 16.354 34.653 1.00 42.54 ? -2 U B P 1 ATOM 301 O OP1 . U B 2 5 ? 5.896 17.013 33.397 1.00 43.86 ? -2 U B OP1 1 ATOM 302 O OP2 . U B 2 5 ? 6.277 16.531 35.884 1.00 39.75 ? -2 U B OP2 1 ATOM 303 O "O5'" . U B 2 5 ? 3.988 16.846 34.938 1.00 41.53 ? -2 U B "O5'" 1 ATOM 304 C "C5'" . U B 2 5 ? 3.733 18.206 35.195 1.00 45.24 ? -2 U B "C5'" 1 ATOM 305 C "C4'" . U B 2 5 ? 2.409 18.363 35.881 1.00 43.72 ? -2 U B "C4'" 1 ATOM 306 O "O4'" . U B 2 5 ? 2.118 17.196 36.689 1.00 41.90 ? -2 U B "O4'" 1 ATOM 307 C "C3'" . U B 2 5 ? 2.425 19.525 36.845 1.00 43.47 ? -2 U B "C3'" 1 ATOM 308 O "O3'" . U B 2 5 ? 2.140 20.722 36.152 1.00 47.42 ? -2 U B "O3'" 1 ATOM 309 C "C2'" . U B 2 5 ? 1.388 19.116 37.882 1.00 42.47 ? -2 U B "C2'" 1 ATOM 310 O "O2'" . U B 2 5 ? 0.049 19.377 37.500 1.00 42.58 ? -2 U B "O2'" 1 ATOM 311 C "C1'" . U B 2 5 ? 1.624 17.604 37.954 1.00 38.98 ? -2 U B "C1'" 1 ATOM 312 N N1 . U B 2 5 ? 2.571 17.160 38.995 1.00 34.69 ? -2 U B N1 1 ATOM 313 C C2 . U B 2 5 ? 2.165 17.232 40.315 1.00 32.06 ? -2 U B C2 1 ATOM 314 O O2 . U B 2 5 ? 1.081 17.669 40.648 1.00 32.77 ? -2 U B O2 1 ATOM 315 N N3 . U B 2 5 ? 3.072 16.766 41.229 1.00 28.95 ? -2 U B N3 1 ATOM 316 C C4 . U B 2 5 ? 4.316 16.250 40.967 1.00 30.87 ? -2 U B C4 1 ATOM 317 O O4 . U B 2 5 ? 5.024 15.870 41.901 1.00 31.58 ? -2 U B O4 1 ATOM 318 C C5 . U B 2 5 ? 4.670 16.217 39.586 1.00 30.70 ? -2 U B C5 1 ATOM 319 C C6 . U B 2 5 ? 3.812 16.666 38.672 1.00 31.89 ? -2 U B C6 1 ATOM 320 P P . C B 2 6 ? 2.924 22.064 36.543 1.00 51.59 ? -1 C B P 1 ATOM 321 O OP1 . C B 2 6 ? 2.579 23.087 35.520 1.00 52.45 ? -1 C B OP1 1 ATOM 322 O OP2 . C B 2 6 ? 4.347 21.689 36.764 1.00 51.88 ? -1 C B OP2 1 ATOM 323 O "O5'" . C B 2 6 ? 2.258 22.480 37.933 1.00 51.58 ? -1 C B "O5'" 1 ATOM 324 C "C5'" . C B 2 6 ? 0.845 22.404 38.090 1.00 51.30 ? -1 C B "C5'" 1 ATOM 325 C "C4'" . C B 2 6 ? 0.404 22.921 39.442 1.00 54.07 ? -1 C B "C4'" 1 ATOM 326 O "O4'" . C B 2 6 ? 0.733 21.946 40.479 1.00 52.72 ? -1 C B "O4'" 1 ATOM 327 C "C3'" . C B 2 6 ? 1.145 24.199 39.829 1.00 55.88 ? -1 C B "C3'" 1 ATOM 328 O "O3'" . C B 2 6 ? 0.371 25.378 40.038 1.00 57.68 ? -1 C B "O3'" 1 ATOM 329 C "C2'" . C B 2 6 ? 2.242 23.799 40.816 1.00 55.42 ? -1 C B "C2'" 1 ATOM 330 O "O2'" . C B 2 6 ? 2.280 24.625 41.954 1.00 60.48 ? -1 C B "O2'" 1 ATOM 331 C "C1'" . C B 2 6 ? 1.703 22.478 41.362 1.00 51.08 ? -1 C B "C1'" 1 ATOM 332 N N1 . C B 2 6 ? 2.685 21.452 41.777 1.00 45.40 ? -1 C B N1 1 ATOM 333 C C2 . C B 2 6 ? 2.708 21.048 43.141 1.00 43.28 ? -1 C B C2 1 ATOM 334 O O2 . C B 2 6 ? 1.876 21.533 43.936 1.00 37.32 ? -1 C B O2 1 ATOM 335 N N3 . C B 2 6 ? 3.634 20.136 43.547 1.00 38.62 ? -1 C B N3 1 ATOM 336 C C4 . C B 2 6 ? 4.497 19.620 42.661 1.00 37.78 ? -1 C B C4 1 ATOM 337 N N4 . C B 2 6 ? 5.378 18.711 43.096 1.00 33.21 ? -1 C B N4 1 ATOM 338 C C5 . C B 2 6 ? 4.490 20.006 41.283 1.00 37.94 ? -1 C B C5 1 ATOM 339 C C6 . C B 2 6 ? 3.575 20.913 40.888 1.00 43.44 ? -1 C B C6 1 ATOM 340 P P . G B 2 7 ? 2.930 26.089 41.873 1.00 65.60 ? 1 G B P 1 ATOM 341 O OP1 . G B 2 7 ? 4.401 25.926 41.687 1.00 62.52 ? 1 G B OP1 1 ATOM 342 O OP2 . G B 2 7 ? 2.157 26.914 40.906 1.00 65.86 ? 1 G B OP2 1 ATOM 343 O "O5'" . G B 2 7 ? 2.648 26.647 43.340 1.00 60.11 ? 1 G B "O5'" 1 ATOM 344 C "C5'" . G B 2 7 ? 3.692 26.735 44.289 1.00 54.64 ? 1 G B "C5'" 1 ATOM 345 C "C4'" . G B 2 7 ? 3.444 25.813 45.466 1.00 49.86 ? 1 G B "C4'" 1 ATOM 346 O "O4'" . G B 2 7 ? 3.235 24.440 45.038 1.00 47.93 ? 1 G B "O4'" 1 ATOM 347 C "C3'" . G B 2 7 ? 4.656 25.782 46.375 1.00 45.84 ? 1 G B "C3'" 1 ATOM 348 O "O3'" . G B 2 7 ? 4.468 26.788 47.349 1.00 43.82 ? 1 G B "O3'" 1 ATOM 349 C "C2'" . G B 2 7 ? 4.617 24.380 46.972 1.00 45.12 ? 1 G B "C2'" 1 ATOM 350 O "O2'" . G B 2 7 ? 3.774 24.284 48.100 1.00 44.66 ? 1 G B "O2'" 1 ATOM 351 C "C1'" . G B 2 7 ? 4.052 23.565 45.805 1.00 42.79 ? 1 G B "C1'" 1 ATOM 352 N N9 . G B 2 7 ? 5.050 22.991 44.901 1.00 41.74 ? 1 G B N9 1 ATOM 353 C C8 . G B 2 7 ? 5.224 23.319 43.574 1.00 40.14 ? 1 G B C8 1 ATOM 354 N N7 . G B 2 7 ? 6.155 22.618 42.988 1.00 39.28 ? 1 G B N7 1 ATOM 355 C C5 . G B 2 7 ? 6.635 21.777 43.984 1.00 37.26 ? 1 G B C5 1 ATOM 356 C C6 . G B 2 7 ? 7.650 20.778 43.934 1.00 36.89 ? 1 G B C6 1 ATOM 357 O O6 . G B 2 7 ? 8.331 20.412 42.962 1.00 36.00 ? 1 G B O6 1 ATOM 358 N N1 . G B 2 7 ? 7.835 20.176 45.177 1.00 34.98 ? 1 G B N1 1 ATOM 359 C C2 . G B 2 7 ? 7.130 20.481 46.312 1.00 34.07 ? 1 G B C2 1 ATOM 360 N N2 . G B 2 7 ? 7.464 19.785 47.417 1.00 37.50 ? 1 G B N2 1 ATOM 361 N N3 . G B 2 7 ? 6.169 21.397 46.369 1.00 36.15 ? 1 G B N3 1 ATOM 362 C C4 . G B 2 7 ? 5.978 22.003 45.178 1.00 38.11 ? 1 G B C4 1 ATOM 363 P P . G B 2 8 ? 5.627 27.861 47.646 1.00 42.02 ? 2 G B P 1 ATOM 364 O OP1 . G B 2 8 ? 5.230 29.124 46.979 1.00 40.87 ? 2 G B OP1 1 ATOM 365 O OP2 . G B 2 8 ? 6.971 27.283 47.379 1.00 37.22 ? 2 G B OP2 1 ATOM 366 O "O5'" . G B 2 8 ? 5.455 28.050 49.214 1.00 42.12 ? 2 G B "O5'" 1 ATOM 367 C "C5'" . G B 2 8 ? 4.155 28.249 49.767 1.00 41.04 ? 2 G B "C5'" 1 ATOM 368 C "C4'" . G B 2 8 ? 4.151 27.922 51.238 1.00 40.46 ? 2 G B "C4'" 1 ATOM 369 O "O4'" . G B 2 8 ? 4.118 26.486 51.448 1.00 37.01 ? 2 G B "O4'" 1 ATOM 370 C "C3'" . G B 2 8 ? 5.381 28.365 52.002 1.00 39.61 ? 2 G B "C3'" 1 ATOM 371 O "O3'" . G B 2 8 ? 5.350 29.762 52.260 1.00 40.98 ? 2 G B "O3'" 1 ATOM 372 C "C2'" . G B 2 8 ? 5.274 27.497 53.248 1.00 39.79 ? 2 G B "C2'" 1 ATOM 373 O "O2'" . G B 2 8 ? 4.273 27.958 54.133 1.00 40.18 ? 2 G B "O2'" 1 ATOM 374 C "C1'" . G B 2 8 ? 4.811 26.168 52.643 1.00 35.59 ? 2 G B "C1'" 1 ATOM 375 N N9 . G B 2 8 ? 5.895 25.241 52.322 1.00 34.16 ? 2 G B N9 1 ATOM 376 C C8 . G B 2 8 ? 6.429 24.984 51.080 1.00 34.68 ? 2 G B C8 1 ATOM 377 N N7 . G B 2 8 ? 7.358 24.065 51.098 1.00 32.06 ? 2 G B N7 1 ATOM 378 C C5 . G B 2 8 ? 7.455 23.698 52.434 1.00 34.34 ? 2 G B C5 1 ATOM 379 C C6 . G B 2 8 ? 8.283 22.726 53.068 1.00 34.66 ? 2 G B C6 1 ATOM 380 O O6 . G B 2 8 ? 9.114 21.968 52.559 1.00 33.72 ? 2 G B O6 1 ATOM 381 N N1 . G B 2 8 ? 8.062 22.683 54.436 1.00 35.10 ? 2 G B N1 1 ATOM 382 C C2 . G B 2 8 ? 7.158 23.457 55.116 1.00 35.05 ? 2 G B C2 1 ATOM 383 N N2 . G B 2 8 ? 7.101 23.256 56.442 1.00 34.18 ? 2 G B N2 1 ATOM 384 N N3 . G B 2 8 ? 6.371 24.357 54.544 1.00 34.83 ? 2 G B N3 1 ATOM 385 C C4 . G B 2 8 ? 6.571 24.425 53.208 1.00 34.61 ? 2 G B C4 1 ATOM 386 P P . A B 2 9 ? 6.718 30.611 52.232 1.00 41.81 ? 3 A B P 1 ATOM 387 O OP1 . A B 2 9 ? 6.370 32.038 52.398 1.00 43.62 ? 3 A B OP1 1 ATOM 388 O OP2 . A B 2 9 ? 7.522 30.195 51.057 1.00 44.09 ? 3 A B OP2 1 ATOM 389 O "O5'" . A B 2 9 ? 7.486 30.118 53.533 1.00 42.08 ? 3 A B "O5'" 1 ATOM 390 C "C5'" . A B 2 9 ? 6.915 30.289 54.825 1.00 41.01 ? 3 A B "C5'" 1 ATOM 391 C "C4'" . A B 2 9 ? 7.657 29.451 55.834 1.00 40.58 ? 3 A B "C4'" 1 ATOM 392 O "O4'" . A B 2 9 ? 7.482 28.044 55.514 1.00 40.31 ? 3 A B "O4'" 1 ATOM 393 C "C3'" . A B 2 9 ? 9.167 29.624 55.865 1.00 40.06 ? 3 A B "C3'" 1 ATOM 394 O "O3'" . A B 2 9 ? 9.547 30.768 56.629 1.00 41.41 ? 3 A B "O3'" 1 ATOM 395 C "C2'" . A B 2 9 ? 9.602 28.328 56.535 1.00 40.22 ? 3 A B "C2'" 1 ATOM 396 O "O2'" . A B 2 9 ? 9.391 28.349 57.928 1.00 34.96 ? 3 A B "O2'" 1 ATOM 397 C "C1'" . A B 2 9 ? 8.640 27.320 55.901 1.00 39.95 ? 3 A B "C1'" 1 ATOM 398 N N9 . A B 2 9 ? 9.207 26.671 54.717 1.00 39.39 ? 3 A B N9 1 ATOM 399 C C8 . A B 2 9 ? 9.036 27.023 53.398 1.00 41.17 ? 3 A B C8 1 ATOM 400 N N7 . A B 2 9 ? 9.700 26.266 52.556 1.00 38.92 ? 3 A B N7 1 ATOM 401 C C5 . A B 2 9 ? 10.347 25.350 53.370 1.00 38.80 ? 3 A B C5 1 ATOM 402 C C6 . A B 2 9 ? 11.209 24.275 53.084 1.00 38.69 ? 3 A B C6 1 ATOM 403 N N6 . A B 2 9 ? 11.579 23.933 51.849 1.00 39.89 ? 3 A B N6 1 ATOM 404 N N1 . A B 2 9 ? 11.682 23.555 54.124 1.00 38.36 ? 3 A B N1 1 ATOM 405 C C2 . A B 2 9 ? 11.307 23.901 55.362 1.00 38.88 ? 3 A B C2 1 ATOM 406 N N3 . A B 2 9 ? 10.503 24.889 55.760 1.00 39.44 ? 3 A B N3 1 ATOM 407 C C4 . A B 2 9 ? 10.049 25.584 54.705 1.00 39.40 ? 3 A B C4 1 ATOM 408 P P . A B 2 10 ? 10.788 31.683 56.150 1.00 40.53 ? 4 A B P 1 ATOM 409 O OP1 . A B 2 10 ? 10.989 32.720 57.192 1.00 44.43 ? 4 A B OP1 1 ATOM 410 O OP2 . A B 2 10 ? 10.556 32.096 54.742 1.00 41.71 ? 4 A B OP2 1 ATOM 411 O "O5'" . A B 2 10 ? 12.047 30.703 56.164 1.00 40.56 ? 4 A B "O5'" 1 ATOM 412 C "C5'" . A B 2 10 ? 12.562 30.175 57.389 1.00 41.89 ? 4 A B "C5'" 1 ATOM 413 C "C4'" . A B 2 10 ? 13.607 29.117 57.105 1.00 43.40 ? 4 A B "C4'" 1 ATOM 414 O "O4'" . A B 2 10 ? 12.986 28.026 56.376 1.00 43.08 ? 4 A B "O4'" 1 ATOM 415 C "C3'" . A B 2 10 ? 14.778 29.555 56.233 1.00 45.83 ? 4 A B "C3'" 1 ATOM 416 O "O3'" . A B 2 10 ? 15.817 30.115 57.035 1.00 50.38 ? 4 A B "O3'" 1 ATOM 417 C "C2'" . A B 2 10 ? 15.217 28.246 55.591 1.00 43.95 ? 4 A B "C2'" 1 ATOM 418 O "O2'" . A B 2 10 ? 16.033 27.462 56.436 1.00 47.76 ? 4 A B "O2'" 1 ATOM 419 C "C1'" . A B 2 10 ? 13.878 27.539 55.389 1.00 41.87 ? 4 A B "C1'" 1 ATOM 420 N N9 . A B 2 10 ? 13.284 27.776 54.071 1.00 41.54 ? 4 A B N9 1 ATOM 421 C C8 . A B 2 10 ? 12.354 28.728 53.714 1.00 39.79 ? 4 A B C8 1 ATOM 422 N N7 . A B 2 10 ? 12.001 28.676 52.453 1.00 37.10 ? 4 A B N7 1 ATOM 423 C C5 . A B 2 10 ? 12.753 27.627 51.941 1.00 39.64 ? 4 A B C5 1 ATOM 424 C C6 . A B 2 10 ? 12.834 27.064 50.661 1.00 37.91 ? 4 A B C6 1 ATOM 425 N N6 . A B 2 10 ? 12.124 27.495 49.620 1.00 40.25 ? 4 A B N6 1 ATOM 426 N N1 . A B 2 10 ? 13.677 26.026 50.485 1.00 37.64 ? 4 A B N1 1 ATOM 427 C C2 . A B 2 10 ? 14.388 25.592 51.528 1.00 37.19 ? 4 A B C2 1 ATOM 428 N N3 . A B 2 10 ? 14.402 26.036 52.777 1.00 39.76 ? 4 A B N3 1 ATOM 429 C C4 . A B 2 10 ? 13.550 27.067 52.923 1.00 39.80 ? 4 A B C4 1 ATOM 430 P P . C B 2 11 ? 16.809 31.227 56.420 1.00 55.11 ? 5 C B P 1 ATOM 431 O OP1 . C B 2 11 ? 17.667 31.694 57.544 1.00 56.31 ? 5 C B OP1 1 ATOM 432 O OP2 . C B 2 11 ? 16.017 32.222 55.641 1.00 52.84 ? 5 C B OP2 1 ATOM 433 O "O5'" . C B 2 11 ? 17.730 30.420 55.398 1.00 55.18 ? 5 C B "O5'" 1 ATOM 434 C "C5'" . C B 2 11 ? 18.702 29.485 55.871 1.00 54.42 ? 5 C B "C5'" 1 ATOM 435 C "C4'" . C B 2 11 ? 19.204 28.618 54.738 1.00 53.29 ? 5 C B "C4'" 1 ATOM 436 O "O4'" . C B 2 11 ? 18.071 27.976 54.093 1.00 51.59 ? 5 C B "O4'" 1 ATOM 437 C "C3'" . C B 2 11 ? 19.904 29.326 53.588 1.00 53.39 ? 5 C B "C3'" 1 ATOM 438 O "O3'" . C B 2 11 ? 21.269 29.686 53.837 1.00 54.08 ? 5 C B "O3'" 1 ATOM 439 C "C2'" . C B 2 11 ? 19.777 28.301 52.469 1.00 53.80 ? 5 C B "C2'" 1 ATOM 440 O "O2'" . C B 2 11 ? 20.710 27.245 52.603 1.00 55.14 ? 5 C B "O2'" 1 ATOM 441 C "C1'" . C B 2 11 ? 18.369 27.755 52.722 1.00 52.41 ? 5 C B "C1'" 1 ATOM 442 N N1 . C B 2 11 ? 17.317 28.380 51.887 1.00 50.49 ? 5 C B N1 1 ATOM 443 C C2 . C B 2 11 ? 17.036 27.822 50.628 1.00 49.53 ? 5 C B C2 1 ATOM 444 O O2 . C B 2 11 ? 17.662 26.817 50.260 1.00 47.49 ? 5 C B O2 1 ATOM 445 N N3 . C B 2 11 ? 16.083 28.390 49.849 1.00 49.67 ? 5 C B N3 1 ATOM 446 C C4 . C B 2 11 ? 15.416 29.463 50.283 1.00 49.88 ? 5 C B C4 1 ATOM 447 N N4 . C B 2 11 ? 14.486 29.989 49.478 1.00 48.12 ? 5 C B N4 1 ATOM 448 C C5 . C B 2 11 ? 15.674 30.046 51.560 1.00 49.85 ? 5 C B C5 1 ATOM 449 C C6 . C B 2 11 ? 16.625 29.480 52.320 1.00 50.81 ? 5 C B C6 1 HETATM 450 MG MG . MG C 3 . ? 5.574 20.217 56.204 1.00 40.59 ? 103 MG A MG 1 HETATM 451 MG MG . MG D 3 . ? 7.091 18.559 38.088 1.00 45.63 ? 108 MG B MG 1 HETATM 452 MG MG . MG E 3 . ? 12.687 32.392 53.379 1.00 45.19 ? 109 MG B MG 1 HETATM 453 MG MG . MG F 3 . ? 19.773 30.749 51.661 1.00 56.48 ? 104 MG B MG 1 HETATM 454 MG MG . MG G 3 . ? 10.280 25.103 49.643 1.00 47.95 ? 140 MG B MG 1 HETATM 455 O O . HOH H 4 . ? 11.829 29.675 46.125 1.00 35.30 ? 110 HOH A O 1 HETATM 456 O O . HOH H 4 . ? -5.146 20.938 45.021 1.00 39.94 ? 118 HOH A O 1 HETATM 457 O O . HOH H 4 . ? -3.854 9.233 43.467 1.00 42.72 ? 122 HOH A O 1 HETATM 458 O O . HOH H 4 . ? 13.025 17.706 53.291 1.00 44.79 ? 127 HOH A O 1 HETATM 459 O O . HOH I 4 . ? 10.666 19.730 52.866 1.00 40.92 ? 101 HOH B O 1 HETATM 460 O O . HOH I 4 . ? 11.358 26.981 59.151 1.00 35.50 ? 102 HOH B O 1 HETATM 461 O O . HOH I 4 . ? 9.885 30.358 50.901 1.00 45.12 ? 105 HOH B O 1 HETATM 462 O O . HOH I 4 . ? 8.221 24.968 47.842 1.00 40.25 ? 112 HOH B O 1 HETATM 463 O O . HOH I 4 . ? 0.194 13.879 36.188 1.00 38.06 ? 130 HOH B O 1 HETATM 464 O O . HOH I 4 . ? 1.418 25.775 48.571 1.00 47.23 ? 134 HOH B O 1 HETATM 465 O O . HOH I 4 . ? 2.815 8.391 47.040 1.00 42.82 ? 136 HOH B O 1 HETATM 466 O O . HOH I 4 . ? 7.275 18.436 41.055 1.00 40.90 ? 137 HOH B O 1 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 44 44 G GUA A . n A 1 2 G 2 45 45 G GUA A . n A 1 3 U 3 46 46 U URI A . n A 1 4 G 4 47 47 G GUA A . n A 1 5 A 5 48 48 A ADE A . n A 1 6 G 6 49 49 G GUA A . n A 1 7 G 7 50 50 G GUA A . n A 1 8 C 8 51 51 C CYT A . n A 1 9 U 9 52 52 U URI A . n A 1 10 G 10 53 53 G GUA A . n B 2 1 C 1 -6 -6 C CYT B . n B 2 2 C 2 -5 -5 C CYT B . n B 2 3 A 3 -4 -4 A ADE B . n B 2 4 G 4 -3 -3 G GUA B . n B 2 5 U 5 -2 -2 U URI B . n B 2 6 C 6 -1 -1 C C2Y B . n B 2 7 G 7 1 1 G G2U B . n B 2 8 G 8 2 2 G GUA B . n B 2 9 A 9 3 3 A ADE B . n B 2 10 A 10 4 4 A ADE B . n B 2 11 C 11 5 5 C CYT B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG 1 103 103 MG MG A . D 3 MG 1 108 108 MG MG B . E 3 MG 1 109 109 MG MG B . F 3 MG 1 104 104 MG MG B . G 3 MG 1 140 140 MG MG B . H 4 HOH 1 110 110 HOH HOH A . H 4 HOH 2 118 118 HOH HOH A . H 4 HOH 3 122 122 HOH HOH A . H 4 HOH 4 127 127 HOH HOH A . I 4 HOH 1 101 101 HOH HOH B . I 4 HOH 2 102 102 HOH HOH B . I 4 HOH 3 105 105 HOH HOH B . I 4 HOH 4 112 112 HOH HOH B . I 4 HOH 5 130 130 HOH HOH B . I 4 HOH 6 134 134 HOH HOH B . I 4 HOH 7 136 136 HOH HOH B . I 4 HOH 8 137 137 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1620 ? 1 MORE -38 ? 1 'SSA (A^2)' 4030 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-02-24 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' pdbx_validate_polymer_linkage 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 EPMR phasing . ? 2 CNS refinement 1.1 ? 3 DENZO 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 N9 _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 G _pdbx_validate_rmsd_angle.auth_seq_id_1 47 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "C1'" _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 G _pdbx_validate_rmsd_angle.auth_seq_id_2 47 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 "C2'" _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 G _pdbx_validate_rmsd_angle.auth_seq_id_3 47 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.11 _pdbx_validate_rmsd_angle.angle_target_value 114.00 _pdbx_validate_rmsd_angle.angle_deviation 9.11 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.30 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 HOH O O N N 111 HOH H1 H N N 112 HOH H2 H N N 113 MG MG MG N N 114 U OP3 O N N 115 U P P N N 116 U OP1 O N N 117 U OP2 O N N 118 U "O5'" O N N 119 U "C5'" C N N 120 U "C4'" C N R 121 U "O4'" O N N 122 U "C3'" C N S 123 U "O3'" O N N 124 U "C2'" C N R 125 U "O2'" O N N 126 U "C1'" C N R 127 U N1 N N N 128 U C2 C N N 129 U O2 O N N 130 U N3 N N N 131 U C4 C N N 132 U O4 O N N 133 U C5 C N N 134 U C6 C N N 135 U HOP3 H N N 136 U HOP2 H N N 137 U "H5'" H N N 138 U "H5''" H N N 139 U "H4'" H N N 140 U "H3'" H N N 141 U "HO3'" H N N 142 U "H2'" H N N 143 U "HO2'" H N N 144 U "H1'" H N N 145 U H3 H N N 146 U H5 H N N 147 U H6 H N N 148 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 HOH O H1 sing N N 116 HOH O H2 sing N N 117 U OP3 P sing N N 118 U OP3 HOP3 sing N N 119 U P OP1 doub N N 120 U P OP2 sing N N 121 U P "O5'" sing N N 122 U OP2 HOP2 sing N N 123 U "O5'" "C5'" sing N N 124 U "C5'" "C4'" sing N N 125 U "C5'" "H5'" sing N N 126 U "C5'" "H5''" sing N N 127 U "C4'" "O4'" sing N N 128 U "C4'" "C3'" sing N N 129 U "C4'" "H4'" sing N N 130 U "O4'" "C1'" sing N N 131 U "C3'" "O3'" sing N N 132 U "C3'" "C2'" sing N N 133 U "C3'" "H3'" sing N N 134 U "O3'" "HO3'" sing N N 135 U "C2'" "O2'" sing N N 136 U "C2'" "C1'" sing N N 137 U "C2'" "H2'" sing N N 138 U "O2'" "HO2'" sing N N 139 U "C1'" N1 sing N N 140 U "C1'" "H1'" sing N N 141 U N1 C2 sing N N 142 U N1 C6 sing N N 143 U C2 O2 doub N N 144 U C2 N3 sing N N 145 U N3 C4 sing N N 146 U N3 H3 sing N N 147 U C4 O4 doub N N 148 U C4 C5 sing N N 149 U C5 C6 doub N N 150 U C5 H5 sing N N 151 U C6 H6 sing N N 152 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3FS0 'double helix' 3FS0 'a-form double helix' 3FS0 'mismatched base pair' 3FS0 'internal loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 2 1_555 B C 11 1_555 -0.279 0.069 0.349 -8.420 -17.427 4.566 1 A_G45:C5_B A 45 ? B 5 ? 19 1 1 A U 3 1_555 B A 10 1_555 0.216 -0.072 0.248 4.150 -11.828 5.630 2 A_U46:A4_B A 46 ? B 4 ? 20 1 1 A A 5 1_555 B G 7 1_555 -7.098 -4.312 -0.360 0.035 -4.562 -8.954 3 A_A48:G1_B A 48 ? B 1 ? 11 10 1 A G 6 1_555 B C 6 1_555 -0.699 -0.143 -0.046 0.216 0.838 -0.465 4 A_G49:C-1_B A 49 ? B -1 ? 19 1 1 A G 7 1_555 B U 5 1_555 -2.284 -0.482 -0.139 3.925 -16.567 1.316 5 A_G50:U-2_B A 50 ? B -2 ? 28 ? 1 A C 8 1_555 B G 4 1_555 0.227 -0.167 0.031 2.733 -12.257 2.085 6 A_C51:G-3_B A 51 ? B -3 ? 19 1 1 A U 9 1_555 B A 3 1_555 -0.080 0.151 0.170 -2.132 -15.026 6.636 7 A_U52:A-4_B A 52 ? B -4 ? 20 1 1 A G 10 1_555 B C 2 1_555 -0.431 -0.068 0.232 -6.616 -12.425 1.331 8 A_G53:C-5_B A 53 ? B -5 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 2 1_555 B C 11 1_555 A U 3 1_555 B A 10 1_555 0.020 -1.059 3.052 -0.486 5.705 31.261 -2.880 -0.118 2.819 10.476 0.893 31.769 1 AA_G45U46:A4C5_BB A 45 ? B 5 ? A 46 ? B 4 ? 1 A A 5 1_555 B G 7 1_555 A G 6 1_555 B C 6 1_555 0.936 -1.277 3.383 -3.065 2.566 61.807 -1.362 -1.054 3.288 2.496 2.980 61.923 2 AA_A48G49:C-1G1_BB A 48 ? B 1 ? A 49 ? B -1 ? 1 A G 6 1_555 B C 6 1_555 A G 7 1_555 B U 5 1_555 -0.217 -1.925 3.122 -4.943 9.206 27.190 -5.581 -0.507 2.361 18.727 10.054 29.094 3 AA_G49G50:U-2C-1_BB A 49 ? B -1 ? A 50 ? B -2 ? 1 A G 7 1_555 B U 5 1_555 A C 8 1_555 B G 4 1_555 0.028 -1.188 3.311 -3.186 3.332 42.502 -1.963 -0.357 3.203 4.580 4.379 42.740 4 AA_G50C51:G-3U-2_BB A 50 ? B -2 ? A 51 ? B -3 ? 1 A C 8 1_555 B G 4 1_555 A U 9 1_555 B A 3 1_555 0.260 -1.595 3.338 1.400 6.758 32.294 -3.924 -0.226 2.961 11.980 -2.481 33.004 5 AA_C51U52:A-4G-3_BB A 51 ? B -3 ? A 52 ? B -4 ? 1 A U 9 1_555 B A 3 1_555 A G 10 1_555 B C 2 1_555 -0.311 -1.884 3.174 -3.045 12.385 26.223 -6.056 0.052 2.109 25.470 6.262 29.112 6 AA_U52G53:C-5A-4_BB A 52 ? B -4 ? A 53 ? B -5 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'MAGNESIUM ION' MG 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3FTM _pdbx_initial_refinement_model.details 'PDB ENTRY 3FTM' #