0.013227
0.000000
0.000000
0.000000
0.013227
0.000000
0.000000
0.000000
0.014989
0.00000
0.00000
0.00000
Forouhar, F.
Lew, S.
Seetharaman, J.
Xiao, R.
Sahdev, S.
Foote, E.L.
Ciccosanti, C.
Wang, D.
Everett, J.K.
Nair, R.
Acton, T.B.
Rost, B.
Montelione, G.T.
Hunt, J.F.
Tong, L.
Northeast Structural Genomics Consortium (NESG)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
75.601
75.601
66.715
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be Published
0353
Crystal structure of the endonuclease/exonuclease/phosphatase (BVU_0621) from Bacteroides vulgatus.
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
mirrors
CCD
2009-02-05
MAR CCD 165 mm
Si(111) CHANNEL
SINGLE WAVELENGTH
M
x-ray
1
0.97877
1.0
X4C
NSLS
0.97877
SYNCHROTRON
NSLS BEAMLINE X4C
30880.836
Putative endonuclease/exonuclease/phosphatase family protein
UNP residues 22-280
1
man
polymer
18.015
water
83
nat
water
no
yes
KTDVRWATFNIRYDNPQDSLNNWQYRKDRVCQFIKDHELDIVG(MSE)QEVLHNQFQDLRAGLPEYDGIGVGRDDGKTAG
EYAPLFYRKDKYEVLDSNTFWLAENPDSVG(MSE)(MSE)GWDAVCVRIATWAKFKDKATGKIF(MSE)AVNTHFDHVGE
EARRQSALLIIRKIKEIVGERPAVVTGDFNVTDASDAYETITTNEFV(MSE)KDAYKTAARVTGVDYTFHDFARIPAEDC
EKIDFIFVTPQVLVKSCEIPAEVPEALLSDHNPQLADLELEHHHHHH
KTDVRWATFNIRYDNPQDSLNNWQYRKDRVCQFIKDHELDIVGMQEVLHNQFQDLRAGLPEYDGIGVGRDDGKTAGEYAP
LFYRKDKYEVLDSNTFWLAENPDSVGMMGWDAVCVRIATWAKFKDKATGKIFMAVNTHFDHVGEEARRQSALLIIRKIKE
IVGERPAVVTGDFNVTDASDAYETITTNEFVMKDAYKTAARVTGVDYTFHDFARIPAEDCEKIDFIFVTPQVLVKSCEIP
AEVPEALLSDHNPQLADLELEHHHHHH
A
BvR56D
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Removal of the first N-terminal 21 amino acids and the terminating residue Phe281, and substitution of Met residues by Seleno-Met residues and addition of a C-tag (LEHHHHHH)
DSM 1447 / NCTC 11154
sample
8482
BVU_0621
435590
Bacteroides vulgatus ATCC 8482
562
Escherichia coli
BL21(DE3)+Magic
Plasmid
pET21
1
3.09
60.15
MICROBATCH UNDER OIL
7.0
Protein solution: 10 mM Tris-HCl pH 7.5, 100 mM Sodium chloride, 5 mM DTT. Reservoir solution: 100 mM Bis-Tris propane pH 7.0, 30% PEG 8000, 60 mM Lithium sulfate, MICROBATCH UNDER OIL, temperature 291K
291
Northeast Structural Genomics Consortium
NESG
PSI, Protein Structure Initiative
audit_author
citation_author
repository
Initial release
Version format compliance
Database references
Structure summary
1
0
2009-02-17
1
1
2011-07-13
1
2
2018-01-24
_audit_author.name
_citation_author.name
Y
RCSB
Y
RCSB
2009-02-08
REL
REL
HOH
water
HOH
301
2
HOH
HOH
301
A
HOH
302
2
HOH
HOH
302
A
HOH
303
2
HOH
HOH
303
A
HOH
304
2
HOH
HOH
304
A
HOH
305
2
HOH
HOH
305
A
HOH
306
2
HOH
HOH
306
A
HOH
307
2
HOH
HOH
307
A
HOH
308
2
HOH
HOH
308
A
HOH
309
2
HOH
HOH
309
A
HOH
310
2
HOH
HOH
310
A
HOH
311
2
HOH
HOH
311
A
HOH
312
2
HOH
HOH
312
A
HOH
313
2
HOH
HOH
313
A
HOH
314
2
HOH
HOH
314
A
HOH
315
2
HOH
HOH
315
A
HOH
316
2
HOH
HOH
316
A
HOH
317
2
HOH
HOH
317
A
HOH
318
2
HOH
HOH
318
A
HOH
319
2
HOH
HOH
319
A
HOH
320
2
HOH
HOH
320
A
HOH
321
2
HOH
HOH
321
A
HOH
322
2
HOH
HOH
322
A
HOH
323
2
HOH
HOH
323
A
HOH
324
2
HOH
HOH
324
A
HOH
325
2
HOH
HOH
325
A
HOH
326
2
HOH
HOH
326
A
HOH
327
2
HOH
HOH
327
A
HOH
328
2
HOH
HOH
328
A
HOH
329
2
HOH
HOH
329
A
HOH
330
2
HOH
HOH
330
A
HOH
331
2
HOH
HOH
331
A
HOH
332
2
HOH
HOH
332
A
HOH
333
2
HOH
HOH
333
A
HOH
334
2
HOH
HOH
334
A
HOH
335
2
HOH
HOH
335
A
HOH
336
2
HOH
HOH
336
A
HOH
337
2
HOH
HOH
337
A
HOH
338
2
HOH
HOH
338
A
HOH
339
2
HOH
HOH
339
A
HOH
340
2
HOH
HOH
340
A
HOH
341
2
HOH
HOH
341
A
HOH
342
2
HOH
HOH
342
A
HOH
343
2
HOH
HOH
343
A
HOH
344
2
HOH
HOH
344
A
HOH
345
2
HOH
HOH
345
A
HOH
346
2
HOH
HOH
346
A
HOH
347
2
HOH
HOH
347
A
HOH
348
2
HOH
HOH
348
A
HOH
349
2
HOH
HOH
349
A
HOH
350
2
HOH
HOH
350
A
HOH
351
2
HOH
HOH
351
A
HOH
352
2
HOH
HOH
352
A
HOH
353
2
HOH
HOH
353
A
HOH
354
2
HOH
HOH
354
A
HOH
355
2
HOH
HOH
355
A
HOH
356
2
HOH
HOH
356
A
HOH
357
2
HOH
HOH
357
A
HOH
358
2
HOH
HOH
358
A
HOH
359
2
HOH
HOH
359
A
HOH
360
2
HOH
HOH
360
A
HOH
361
2
HOH
HOH
361
A
HOH
362
2
HOH
HOH
362
A
HOH
363
2
HOH
HOH
363
A
HOH
364
2
HOH
HOH
364
A
HOH
365
2
HOH
HOH
365
A
HOH
366
2
HOH
HOH
366
A
HOH
367
2
HOH
HOH
367
A
HOH
368
2
HOH
HOH
368
A
HOH
369
2
HOH
HOH
369
A
HOH
370
2
HOH
HOH
370
A
HOH
371
2
HOH
HOH
371
A
HOH
372
2
HOH
HOH
372
A
HOH
373
2
HOH
HOH
373
A
HOH
374
2
HOH
HOH
374
A
HOH
375
2
HOH
HOH
375
A
HOH
376
2
HOH
HOH
376
A
HOH
377
2
HOH
HOH
377
A
HOH
378
2
HOH
HOH
378
A
HOH
379
2
HOH
HOH
379
A
HOH
380
2
HOH
HOH
380
A
HOH
381
2
HOH
HOH
381
A
HOH
382
2
HOH
HOH
382
A
HOH
383
2
HOH
HOH
383
A
LYS
22
n
1
LYS
1
A
THR
23
n
2
THR
2
A
ASP
24
n
3
ASP
3
A
VAL
25
n
4
VAL
4
A
ARG
26
n
5
ARG
5
A
TRP
27
n
6
TRP
6
A
ALA
28
n
7
ALA
7
A
THR
29
n
8
THR
8
A
PHE
30
n
9
PHE
9
A
ASN
31
n
10
ASN
10
A
ILE
32
n
11
ILE
11
A
ARG
33
n
12
ARG
12
A
TYR
34
n
13
TYR
13
A
ASP
35
n
14
ASP
14
A
ASN
36
n
15
ASN
15
A
PRO
37
n
16
PRO
16
A
GLN
38
n
17
GLN
17
A
ASP
39
n
18
ASP
18
A
SER
39
n
19
SER
19
A
LEU
41
n
20
LEU
20
A
ASN
42
n
21
ASN
21
A
ASN
43
n
22
ASN
22
A
TRP
44
n
23
TRP
23
A
GLN
45
n
24
GLN
24
A
TYR
46
n
25
TYR
25
A
ARG
47
n
26
ARG
26
A
LYS
48
n
27
LYS
27
A
ASP
49
n
28
ASP
28
A
ARG
50
n
29
ARG
29
A
VAL
51
n
30
VAL
30
A
CYS
52
n
31
CYS
31
A
GLN
53
n
32
GLN
32
A
PHE
54
n
33
PHE
33
A
ILE
55
n
34
ILE
34
A
LYS
56
n
35
LYS
35
A
ASP
57
n
36
ASP
36
A
HIS
58
n
37
HIS
37
A
GLU
59
n
38
GLU
38
A
LEU
60
n
39
LEU
39
A
ASP
61
n
40
ASP
40
A
ILE
62
n
41
ILE
41
A
VAL
63
n
42
VAL
42
A
GLY
64
n
43
GLY
43
A
MSE
65
n
44
MSE
44
A
GLN
66
n
45
GLN
45
A
GLU
67
n
46
GLU
46
A
VAL
68
n
47
VAL
47
A
LEU
69
n
48
LEU
48
A
HIS
70
n
49
HIS
49
A
ASN
71
n
50
ASN
50
A
GLN
72
n
51
GLN
51
A
PHE
73
n
52
PHE
52
A
GLN
74
n
53
GLN
53
A
ASP
75
n
54
ASP
54
A
LEU
76
n
55
LEU
55
A
ARG
77
n
56
ARG
56
A
ALA
78
n
57
ALA
57
A
GLY
79
n
58
GLY
58
A
LEU
80
n
59
LEU
59
A
PRO
81
n
60
PRO
60
A
GLU
82
n
61
GLU
61
A
TYR
83
n
62
TYR
62
A
ASP
84
n
63
ASP
63
A
GLY
85
n
64
GLY
64
A
ILE
86
n
65
ILE
65
A
GLY
87
n
66
GLY
66
A
VAL
88
n
67
VAL
67
A
GLY
89
n
68
GLY
68
A
ARG
90
n
69
ARG
69
A
ASP
91
n
70
ASP
70
A
ASP
92
n
71
ASP
71
A
GLY
93
n
72
GLY
72
A
LYS
94
n
73
LYS
73
A
THR
95
n
74
THR
74
A
ALA
96
n
75
ALA
75
A
GLY
97
n
76
GLY
76
A
GLU
98
n
77
GLU
77
A
TYR
99
n
78
TYR
78
A
ALA
100
n
79
ALA
79
A
PRO
101
n
80
PRO
80
A
LEU
102
n
81
LEU
81
A
PHE
103
n
82
PHE
82
A
TYR
104
n
83
TYR
83
A
ARG
105
n
84
ARG
84
A
LYS
106
n
85
LYS
85
A
ASP
107
n
86
ASP
86
A
LYS
108
n
87
LYS
87
A
TYR
109
n
88
TYR
88
A
GLU
110
n
89
GLU
89
A
VAL
111
n
90
VAL
90
A
LEU
112
n
91
LEU
91
A
ASP
113
n
92
ASP
92
A
SER
114
n
93
SER
93
A
ASN
115
n
94
ASN
94
A
THR
116
n
95
THR
95
A
PHE
117
n
96
PHE
96
A
TRP
118
n
97
TRP
97
A
LEU
119
n
98
LEU
98
A
ALA
120
n
99
ALA
99
A
GLU
121
n
100
GLU
100
A
ASN
122
n
101
ASN
101
A
PRO
123
n
102
PRO
102
A
ASP
124
n
103
ASP
103
A
SER
125
n
104
SER
104
A
VAL
126
n
105
VAL
105
A
GLY
127
n
106
GLY
106
A
MSE
128
n
107
MSE
107
A
MSE
129
n
108
MSE
108
A
GLY
130
n
109
GLY
109
A
TRP
131
n
110
TRP
110
A
ASP
132
n
111
ASP
111
A
ALA
133
n
112
ALA
112
A
VAL
134
n
113
VAL
113
A
CYS
135
n
114
CYS
114
A
VAL
136
n
115
VAL
115
A
ARG
137
n
116
ARG
116
A
ILE
138
n
117
ILE
117
A
ALA
139
n
118
ALA
118
A
THR
140
n
119
THR
119
A
TRP
141
n
120
TRP
120
A
ALA
142
n
121
ALA
121
A
LYS
143
n
122
LYS
122
A
PHE
144
n
123
PHE
123
A
LYS
145
n
124
LYS
124
A
ASP
146
n
125
ASP
125
A
LYS
147
n
126
LYS
126
A
ALA
148
n
127
ALA
127
A
THR
149
n
128
THR
128
A
GLY
150
n
129
GLY
129
A
LYS
151
n
130
LYS
130
A
ILE
152
n
131
ILE
131
A
PHE
153
n
132
PHE
132
A
MSE
154
n
133
MSE
133
A
ALA
155
n
134
ALA
134
A
VAL
156
n
135
VAL
135
A
ASN
157
n
136
ASN
136
A
THR
158
n
137
THR
137
A
HIS
159
n
138
HIS
138
A
PHE
160
n
139
PHE
139
A
ASP
161
n
140
ASP
140
A
HIS
162
n
141
HIS
141
A
VAL
163
n
142
VAL
142
A
GLY
164
n
143
GLY
143
A
GLU
165
n
144
GLU
144
A
GLU
166
n
145
GLU
145
A
ALA
167
n
146
ALA
146
A
ARG
168
n
147
ARG
147
A
ARG
169
n
148
ARG
148
A
GLN
170
n
149
GLN
149
A
SER
171
n
150
SER
150
A
ALA
172
n
151
ALA
151
A
LEU
173
n
152
LEU
152
A
LEU
174
n
153
LEU
153
A
ILE
175
n
154
ILE
154
A
ILE
176
n
155
ILE
155
A
ARG
177
n
156
ARG
156
A
LYS
178
n
157
LYS
157
A
ILE
179
n
158
ILE
158
A
LYS
180
n
159
LYS
159
A
GLU
181
n
160
GLU
160
A
ILE
182
n
161
ILE
161
A
VAL
183
n
162
VAL
162
A
GLY
184
n
163
GLY
163
A
GLU
185
n
164
GLU
164
A
ARG
186
n
165
ARG
165
A
PRO
187
n
166
PRO
166
A
ALA
188
n
167
ALA
167
A
VAL
189
n
168
VAL
168
A
VAL
190
n
169
VAL
169
A
THR
191
n
170
THR
170
A
GLY
192
n
171
GLY
171
A
ASP
193
n
172
ASP
172
A
PHE
194
n
173
PHE
173
A
ASN
195
n
174
ASN
174
A
VAL
196
n
175
VAL
175
A
THR
197
n
176
THR
176
A
ASP
198
n
177
ASP
177
A
ALA
199
n
178
ALA
178
A
SER
200
n
179
SER
179
A
ASP
201
n
180
ASP
180
A
ALA
202
n
181
ALA
181
A
TYR
203
n
182
TYR
182
A
GLU
204
n
183
GLU
183
A
THR
205
n
184
THR
184
A
ILE
206
n
185
ILE
185
A
THR
207
n
186
THR
186
A
THR
208
n
187
THR
187
A
ASN
209
n
188
ASN
188
A
GLU
210
n
189
GLU
189
A
PHE
211
n
190
PHE
190
A
VAL
212
n
191
VAL
191
A
MSE
213
n
192
MSE
192
A
LYS
214
n
193
LYS
193
A
ASP
215
n
194
ASP
194
A
ALA
216
n
195
ALA
195
A
TYR
217
n
196
TYR
196
A
LYS
218
n
197
LYS
197
A
THR
219
n
198
THR
198
A
ALA
220
n
199
ALA
199
A
ALA
221
n
200
ALA
200
A
ARG
222
n
201
ARG
201
A
VAL
223
n
202
VAL
202
A
THR
224
n
203
THR
203
A
GLY
225
n
204
GLY
204
A
VAL
226
n
205
VAL
205
A
ASP
227
n
206
ASP
206
A
TYR
228
n
207
TYR
207
A
THR
229
n
208
THR
208
A
PHE
230
n
209
PHE
209
A
HIS
231
n
210
HIS
210
A
ASP
232
n
211
ASP
211
A
PHE
233
n
212
PHE
212
A
ALA
234
n
213
ALA
213
A
ARG
235
n
214
ARG
214
A
ILE
236
n
215
ILE
215
A
PRO
237
n
216
PRO
216
A
ALA
238
n
217
ALA
217
A
GLU
239
n
218
GLU
218
A
ASP
240
n
219
ASP
219
A
CYS
241
n
220
CYS
220
A
GLU
242
n
221
GLU
221
A
LYS
243
n
222
LYS
222
A
ILE
244
n
223
ILE
223
A
ASP
245
n
224
ASP
224
A
PHE
246
n
225
PHE
225
A
ILE
247
n
226
ILE
226
A
PHE
248
n
227
PHE
227
A
VAL
249
n
228
VAL
228
A
THR
250
n
229
THR
229
A
PRO
251
n
230
PRO
230
A
GLN
252
n
231
GLN
231
A
VAL
253
n
232
VAL
232
A
LEU
254
n
233
LEU
233
A
VAL
255
n
234
VAL
234
A
LYS
256
n
235
LYS
235
A
SER
257
n
236
SER
236
A
CYS
258
n
237
CYS
237
A
GLU
259
n
238
GLU
238
A
ILE
260
n
239
ILE
239
A
PRO
261
n
240
PRO
240
A
ALA
262
n
241
ALA
241
A
GLU
263
n
242
GLU
242
A
VAL
264
n
243
VAL
243
A
PRO
265
n
244
PRO
244
A
GLU
266
n
245
GLU
245
A
ALA
267
n
246
ALA
246
A
LEU
268
n
247
LEU
247
A
LEU
269
n
248
LEU
248
A
SER
270
n
249
SER
249
A
ASP
271
n
250
ASP
250
A
HIS
272
n
251
HIS
251
A
ASN
273
n
252
ASN
252
A
PRO
274
n
253
PRO
253
A
GLN
275
n
254
GLN
254
A
LEU
276
n
255
LEU
255
A
ALA
277
n
256
ALA
256
A
ASP
278
n
257
ASP
257
A
LEU
279
n
258
LEU
258
A
GLU
280
n
259
GLU
259
A
LEU
281
n
260
LEU
260
A
GLU
282
n
261
GLU
261
A
n
262
262
A
n
263
263
A
n
264
264
A
n
265
265
A
n
266
266
A
n
267
267
A
author_and_software_defined_assembly
PISA
1
monomeric
A
MSE
44
SELENOMETHIONINE
A
MSE
44
MET
A
MSE
107
SELENOMETHIONINE
A
MSE
107
MET
A
MSE
108
SELENOMETHIONINE
A
MSE
108
MET
A
MSE
133
SELENOMETHIONINE
A
MSE
133
MET
A
MSE
192
SELENOMETHIONINE
A
MSE
192
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ASP
63
A
N
ASP
63
A
O
TYR
83
A
O
TYR
83
A
O
PHE
82
A
O
PHE
82
A
N
VAL
42
A
N
VAL
42
A
O
GLY
43
A
O
GLY
43
A
N
ALA
7
A
N
ALA
7
A
N
TRP
6
A
N
TRP
6
A
O
ALA
256
A
O
ALA
256
A
O
GLU
259
A
O
GLU
259
A
N
LEU
233
A
N
LEU
233
A
O
CYS
237
A
O
CYS
237
A
N
THR
203
A
N
THR
203
A
N
ASP
92
A
N
ASP
92
A
O
LYS
122
A
O
LYS
122
A
N
THR
119
A
N
THR
119
A
O
ASN
136
A
O
ASN
136
A
N
VAL
135
A
N
VAL
135
A
O
VAL
168
A
O
VAL
168
A
N
VAL
169
A
N
VAL
169
A
O
PHE
227
A
O
PHE
227
A
O
VAL
228
A
O
VAL
228
A
N
LYS
193
A
N
LYS
193
1
A
HIS
262
A
HIS
262
1
Y
1
A
HIS
263
A
HIS
263
1
Y
1
A
HIS
264
A
HIS
264
1
Y
1
A
HIS
265
A
HIS
265
1
Y
1
A
HIS
266
A
HIS
266
1
Y
1
A
HIS
267
A
HIS
267
1
Y
1
A
ARG
12
68.12
108.83
1
A
SER
19
47.04
-112.39
1
A
LYS
73
-127.21
-95.56
1
A
ASN
94
-173.57
-178.35
1
A
PRO
102
-59.99
-7.26
1
A
TRP
110
50.23
-139.81
1
A
ALA
112
-35.31
146.86
1
A
LYS
126
-75.98
49.90
1
A
ALA
127
-156.17
-37.33
37.2
-7.84
0.00
0.00
-7.84
0.00
15.68
Program XtalView has also been used in refinement
0.234
0.007
0.180
0.182
0.180
2.50
19.43
1018
25328
21393
4.8
84.2
RANDOM
502662.79
0.000000
1
RESTRAINED
THROUGHOUT
2.0
SAD
Engh & Huber
FLAT MODEL
30.3329
0.35
0.36
0.26
5.00
0.30
0.26
2.50
19.43
83
2182
0
0
2099
0.007
1.2
24.6
0.76
0.249
0.035
0.204
2.59
51
1311
1311
10
3.7
52.5
23.6
2.50
30.0
3G6S
25328
25328
0
0
0.120
0.096
1
18.01
6.8
99.6
0.414
2.50
2.59
2.75
2567
0.375
5.1
97.5
data collection
ADSC
Quantum
phasing
SHELXD
phasing
SOLVE
model building
RESOLVE
refinement
CNS
1.2
data reduction
HKL-2000
data scaling
SCALEPACK
phasing
RESOLVE
Putative endonuclease/exonuclease/phosphatase family protein
Crystal structure of the endonuclease/exonuclease/phosphatase (BVU_0621) from Bacteroides vulgatus. Northeast Structural Genomics Consortium Target BvR56D
1
N
N
2
N
N
A
ASN
15
A
ASN
15
HELX_P
A
TYR
25
A
TYR
25
5
1
11
A
ARG
26
A
ARG
26
HELX_P
A
HIS
37
A
HIS
37
1
2
12
A
LEU
48
A
LEU
48
HELX_P
A
LEU
59
A
LEU
59
1
3
12
A
GLY
143
A
GLY
143
HELX_P
A
VAL
162
A
VAL
162
1
4
20
A
SER
179
A
SER
179
HELX_P
A
THR
187
A
THR
187
1
5
9
A
ALA
195
A
ALA
195
HELX_P
A
ALA
199
A
ALA
199
1
6
5
A
PRO
216
A
PRO
216
HELX_P
A
CYS
220
A
CYS
220
5
7
5
covale
1.328
A
GLY
43
A
C
GLY
43
1_555
A
MSE
44
A
N
MSE
44
1_555
covale
1.328
A
MSE
44
A
C
MSE
44
1_555
A
GLN
45
A
N
GLN
45
1_555
covale
1.327
A
GLY
106
A
C
GLY
106
1_555
A
MSE
107
A
N
MSE
107
1_555
covale
1.329
A
MSE
107
A
C
MSE
107
1_555
A
MSE
108
A
N
MSE
108
1_555
covale
1.329
A
MSE
108
A
C
MSE
108
1_555
A
GLY
109
A
N
GLY
109
1_555
covale
1.321
A
PHE
132
A
C
PHE
132
1_555
A
MSE
133
A
N
MSE
133
1_555
covale
1.321
A
MSE
133
A
C
MSE
133
1_555
A
ALA
134
A
N
ALA
134
1_555
covale
1.329
A
VAL
191
A
C
VAL
191
1_555
A
MSE
192
A
N
MSE
192
1_555
covale
1.324
A
MSE
192
A
C
MSE
192
1_555
A
LYS
193
A
N
LYS
193
1_555
HYDROLASE
alpha-beta protein, endonuclease/exonuclease/phosphatase, Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, Endonuclease, Exonuclease, HYDROLASE
A6KY15_BACV8
UNP
1
22
A6KY15
KTDVRWATFNIRYDNPQDSLNNWQYRKDRVCQFIKDHELDIVGMQEVLHNQFQDLRAGLPEYDGIGVGRDDGKTAGEYAP
LFYRKDKYEVLDSNTFWLAENPDSVGMMGWDAVCVRIATWAKFKDKATGKIFMAVNTHFDHVGEEARRQSALLIIRKIKE
IVGERPAVVTGDFNVTDASDAYETITTNEFVMKDAYKTAARVTGVDYTFHDFARIPAEDCEKIDFIFVTPQVLVKSCEIP
AEVPEALLSDHNPQLADLE
22
280
3G6S
1
259
A6KY15
A
1
1
259
1
EXPRESSION TAG
LEU
260
3G6S
A
A6KY15
UNP
260
1
EXPRESSION TAG
GLU
261
3G6S
A
A6KY15
UNP
261
1
EXPRESSION TAG
HIS
262
3G6S
A
A6KY15
UNP
262
1
EXPRESSION TAG
HIS
263
3G6S
A
A6KY15
UNP
263
1
EXPRESSION TAG
HIS
264
3G6S
A
A6KY15
UNP
264
1
EXPRESSION TAG
HIS
265
3G6S
A
A6KY15
UNP
265
1
EXPRESSION TAG
HIS
266
3G6S
A
A6KY15
UNP
266
1
EXPRESSION TAG
HIS
267
3G6S
A
A6KY15
UNP
267
7
6
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
A
TYR
62
A
TYR
62
A
ILE
65
A
ILE
65
A
LEU
81
A
LEU
81
A
ARG
84
A
ARG
84
A
ILE
41
A
ILE
41
A
GLN
45
A
GLN
45
A
THR
2
A
THR
2
A
ASN
10
A
ASN
10
A
GLN
254
A
GLN
254
A
LEU
260
A
LEU
260
A
LEU
233
A
LEU
233
A
ILE
239
A
ILE
239
A
ARG
201
A
ARG
201
A
GLY
204
A
GLY
204
A
TYR
88
A
TYR
88
A
TRP
97
A
TRP
97
A
ILE
117
A
ILE
117
A
ASP
125
A
ASP
125
A
ILE
131
A
ILE
131
A
HIS
138
A
HIS
138
A
ALA
167
A
ALA
167
A
ASP
172
A
ASP
172
A
ASP
224
A
ASP
224
A
VAL
228
A
VAL
228
A
LYS
193
A
LYS
193
A
ASP
194
A
ASP
194
76
P 41