0.014281
0.000000
0.000000
0.000000
0.010410
0.000000
0.000000
0.000000
0.010002
0.00000
0.00000
0.00000
Bagaria, A.
0000-0002-2487-9713
Burley, S.K.
Swaminathan, S.
New York SGX Research Center for Structural Genomics (NYSGXRC)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
70.024
96.058
99.976
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be Published
0353
Crystal structure of LacI family transcription regulator from Clostridium acetobutylicum
0000-0002-2487-9713
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
Mirrors
CCD
2009-02-04
ADSC QUANTUM 315
Si(111) channel
SINGLE WAVELENGTH
M
x-ray
1
0.9790
1.0
X25
NSLS
0.9790
SYNCHROTRON
NSLS BEAMLINE X25
32616.432
Transcriptional regulator (LacI family)
UNP residues 58-335
1
man
polymer
92.094
GLYCEROL
1
syn
non-polymer
18.015
water
214
nat
water
no
yes
(MSE)SLRSKNSQSKPTIALYWSSDISVNIISRFLRGLQSKLAKQNYNYNVVICPYKTDCLHLEKGISKENSFDAAIIAN
ISNYDLEYLNKASLTLPIILFNRLSNKYSSVNVDNYK(MSE)GEKASLLFAKKRYKSAAAILTESLNDA(MSE)DNRNKG
FIETCHKNGIKISENHIIAAENSIHGGVDAAKKL(MSE)KLKNTPKALFCNSDSIALGVISVLNKRQISIPDDIEIVAIG
(MSE)NDREYTEFSTPPVTIVDIPIEE(MSE)AGTCISLVEKLINRDIENPTSILFDGPLILRNSEGHHHHHH
MSLRSKNSQSKPTIALYWSSDISVNIISRFLRGLQSKLAKQNYNYNVVICPYKTDCLHLEKGISKENSFDAAIIANISNY
DLEYLNKASLTLPIILFNRLSNKYSSVNVDNYKMGEKASLLFAKKRYKSAAAILTESLNDAMDNRNKGFIETCHKNGIKI
SENHIIAAENSIHGGVDAAKKLMKLKNTPKALFCNSDSIALGVISVLNKRQISIPDDIEIVAIGMNDREYTEFSTPPVTI
VDIPIEEMAGTCISLVEKLINRDIENPTSILFDGPLILRNSEGHHHHHH
A
NYSGXRC-11230o
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787
sample
824
CA_C3553
272562
Clostridium acetobutylicum ATCC 824
562
Escherichia coli
Plasmid
pSGX3(BC)
1
2.58
52.27
VAPOR DIFFUSION, SITTING DROP
6.5
0.1M Bis-Tris pH 6.5, 28% w/v PEG MME 2000, VAPOR DIFFUSION, SITTING DROP, temperature 298K
298
New York SGX Research Center for Structural Genomics
NYSGXRC
PSI, Protein Structure Initiative
audit_author
citation_author
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Non-polymer description
Version format compliance
Database references
Derived calculations
Structure summary
1
0
2009-02-24
1
1
2011-07-13
1
2
2021-02-10
_audit_author.identifier_ORCID
_citation_author.identifier_ORCID
_struct_conn.pdbx_leaving_atom_flag
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
RCSB
Y
RCSB
2009-02-11
REL
REL
GOL
GLYCEROL
HOH
water
GOL
401
2
GOL
GOL
401
A
HOH
501
3
HOH
HOH
501
A
HOH
502
3
HOH
HOH
502
A
HOH
503
3
HOH
HOH
503
A
HOH
504
3
HOH
HOH
504
A
HOH
505
3
HOH
HOH
505
A
HOH
506
3
HOH
HOH
506
A
HOH
507
3
HOH
HOH
507
A
HOH
508
3
HOH
HOH
508
A
HOH
509
3
HOH
HOH
509
A
HOH
510
3
HOH
HOH
510
A
HOH
511
3
HOH
HOH
511
A
HOH
512
3
HOH
HOH
512
A
HOH
513
3
HOH
HOH
513
A
HOH
514
3
HOH
HOH
514
A
HOH
515
3
HOH
HOH
515
A
HOH
516
3
HOH
HOH
516
A
HOH
517
3
HOH
HOH
517
A
HOH
518
3
HOH
HOH
518
A
HOH
519
3
HOH
HOH
519
A
HOH
520
3
HOH
HOH
520
A
HOH
521
3
HOH
HOH
521
A
HOH
522
3
HOH
HOH
522
A
HOH
523
3
HOH
HOH
523
A
HOH
524
3
HOH
HOH
524
A
HOH
525
3
HOH
HOH
525
A
HOH
526
3
HOH
HOH
526
A
HOH
527
3
HOH
HOH
527
A
HOH
528
3
HOH
HOH
528
A
HOH
529
3
HOH
HOH
529
A
HOH
530
3
HOH
HOH
530
A
HOH
531
3
HOH
HOH
531
A
HOH
532
3
HOH
HOH
532
A
HOH
533
3
HOH
HOH
533
A
HOH
534
3
HOH
HOH
534
A
HOH
535
3
HOH
HOH
535
A
HOH
536
3
HOH
HOH
536
A
HOH
537
3
HOH
HOH
537
A
HOH
538
3
HOH
HOH
538
A
HOH
539
3
HOH
HOH
539
A
HOH
540
3
HOH
HOH
540
A
HOH
541
3
HOH
HOH
541
A
HOH
542
3
HOH
HOH
542
A
HOH
543
3
HOH
HOH
543
A
HOH
544
3
HOH
HOH
544
A
HOH
545
3
HOH
HOH
545
A
HOH
546
3
HOH
HOH
546
A
HOH
547
3
HOH
HOH
547
A
HOH
548
3
HOH
HOH
548
A
HOH
549
3
HOH
HOH
549
A
HOH
550
3
HOH
HOH
550
A
HOH
551
3
HOH
HOH
551
A
HOH
552
3
HOH
HOH
552
A
HOH
553
3
HOH
HOH
553
A
HOH
554
3
HOH
HOH
554
A
HOH
555
3
HOH
HOH
555
A
HOH
556
3
HOH
HOH
556
A
HOH
557
3
HOH
HOH
557
A
HOH
558
3
HOH
HOH
558
A
HOH
559
3
HOH
HOH
559
A
HOH
560
3
HOH
HOH
560
A
HOH
561
3
HOH
HOH
561
A
HOH
562
3
HOH
HOH
562
A
HOH
563
3
HOH
HOH
563
A
HOH
564
3
HOH
HOH
564
A
HOH
565
3
HOH
HOH
565
A
HOH
566
3
HOH
HOH
566
A
HOH
567
3
HOH
HOH
567
A
HOH
568
3
HOH
HOH
568
A
HOH
569
3
HOH
HOH
569
A
HOH
570
3
HOH
HOH
570
A
HOH
571
3
HOH
HOH
571
A
HOH
572
3
HOH
HOH
572
A
HOH
573
3
HOH
HOH
573
A
HOH
574
3
HOH
HOH
574
A
HOH
575
3
HOH
HOH
575
A
HOH
576
3
HOH
HOH
576
A
HOH
577
3
HOH
HOH
577
A
HOH
578
3
HOH
HOH
578
A
HOH
579
3
HOH
HOH
579
A
HOH
580
3
HOH
HOH
580
A
HOH
581
3
HOH
HOH
581
A
HOH
582
3
HOH
HOH
582
A
HOH
583
3
HOH
HOH
583
A
HOH
584
3
HOH
HOH
584
A
HOH
585
3
HOH
HOH
585
A
HOH
586
3
HOH
HOH
586
A
HOH
587
3
HOH
HOH
587
A
HOH
588
3
HOH
HOH
588
A
HOH
589
3
HOH
HOH
589
A
HOH
590
3
HOH
HOH
590
A
HOH
591
3
HOH
HOH
591
A
HOH
592
3
HOH
HOH
592
A
HOH
593
3
HOH
HOH
593
A
HOH
594
3
HOH
HOH
594
A
HOH
595
3
HOH
HOH
595
A
HOH
596
3
HOH
HOH
596
A
HOH
597
3
HOH
HOH
597
A
HOH
598
3
HOH
HOH
598
A
HOH
599
3
HOH
HOH
599
A
HOH
600
3
HOH
HOH
600
A
HOH
601
3
HOH
HOH
601
A
HOH
602
3
HOH
HOH
602
A
HOH
603
3
HOH
HOH
603
A
HOH
604
3
HOH
HOH
604
A
HOH
605
3
HOH
HOH
605
A
HOH
606
3
HOH
HOH
606
A
HOH
607
3
HOH
HOH
607
A
HOH
608
3
HOH
HOH
608
A
HOH
609
3
HOH
HOH
609
A
HOH
610
3
HOH
HOH
610
A
HOH
611
3
HOH
HOH
611
A
HOH
612
3
HOH
HOH
612
A
HOH
613
3
HOH
HOH
613
A
HOH
614
3
HOH
HOH
614
A
HOH
615
3
HOH
HOH
615
A
HOH
616
3
HOH
HOH
616
A
HOH
617
3
HOH
HOH
617
A
HOH
618
3
HOH
HOH
618
A
HOH
619
3
HOH
HOH
619
A
HOH
620
3
HOH
HOH
620
A
HOH
621
3
HOH
HOH
621
A
HOH
622
3
HOH
HOH
622
A
HOH
623
3
HOH
HOH
623
A
HOH
624
3
HOH
HOH
624
A
HOH
625
3
HOH
HOH
625
A
HOH
626
3
HOH
HOH
626
A
HOH
627
3
HOH
HOH
627
A
HOH
628
3
HOH
HOH
628
A
HOH
629
3
HOH
HOH
629
A
HOH
630
3
HOH
HOH
630
A
HOH
631
3
HOH
HOH
631
A
HOH
632
3
HOH
HOH
632
A
HOH
633
3
HOH
HOH
633
A
HOH
634
3
HOH
HOH
634
A
HOH
635
3
HOH
HOH
635
A
HOH
636
3
HOH
HOH
636
A
HOH
637
3
HOH
HOH
637
A
HOH
638
3
HOH
HOH
638
A
HOH
639
3
HOH
HOH
639
A
HOH
640
3
HOH
HOH
640
A
HOH
641
3
HOH
HOH
641
A
HOH
642
3
HOH
HOH
642
A
HOH
643
3
HOH
HOH
643
A
HOH
644
3
HOH
HOH
644
A
HOH
645
3
HOH
HOH
645
A
HOH
646
3
HOH
HOH
646
A
HOH
647
3
HOH
HOH
647
A
HOH
648
3
HOH
HOH
648
A
HOH
649
3
HOH
HOH
649
A
HOH
650
3
HOH
HOH
650
A
HOH
651
3
HOH
HOH
651
A
HOH
652
3
HOH
HOH
652
A
HOH
653
3
HOH
HOH
653
A
HOH
654
3
HOH
HOH
654
A
HOH
655
3
HOH
HOH
655
A
HOH
656
3
HOH
HOH
656
A
HOH
657
3
HOH
HOH
657
A
HOH
658
3
HOH
HOH
658
A
HOH
659
3
HOH
HOH
659
A
HOH
660
3
HOH
HOH
660
A
HOH
661
3
HOH
HOH
661
A
HOH
662
3
HOH
HOH
662
A
HOH
663
3
HOH
HOH
663
A
HOH
664
3
HOH
HOH
664
A
HOH
665
3
HOH
HOH
665
A
HOH
666
3
HOH
HOH
666
A
HOH
667
3
HOH
HOH
667
A
HOH
668
3
HOH
HOH
668
A
HOH
669
3
HOH
HOH
669
A
HOH
670
3
HOH
HOH
670
A
HOH
671
3
HOH
HOH
671
A
HOH
672
3
HOH
HOH
672
A
HOH
673
3
HOH
HOH
673
A
HOH
674
3
HOH
HOH
674
A
HOH
675
3
HOH
HOH
675
A
HOH
676
3
HOH
HOH
676
A
HOH
677
3
HOH
HOH
677
A
HOH
678
3
HOH
HOH
678
A
HOH
679
3
HOH
HOH
679
A
HOH
680
3
HOH
HOH
680
A
HOH
681
3
HOH
HOH
681
A
HOH
682
3
HOH
HOH
682
A
HOH
683
3
HOH
HOH
683
A
HOH
684
3
HOH
HOH
684
A
HOH
685
3
HOH
HOH
685
A
HOH
686
3
HOH
HOH
686
A
HOH
687
3
HOH
HOH
687
A
HOH
688
3
HOH
HOH
688
A
HOH
689
3
HOH
HOH
689
A
HOH
690
3
HOH
HOH
690
A
HOH
691
3
HOH
HOH
691
A
HOH
692
3
HOH
HOH
692
A
HOH
693
3
HOH
HOH
693
A
HOH
694
3
HOH
HOH
694
A
HOH
695
3
HOH
HOH
695
A
HOH
696
3
HOH
HOH
696
A
HOH
697
3
HOH
HOH
697
A
HOH
698
3
HOH
HOH
698
A
HOH
699
3
HOH
HOH
699
A
HOH
700
3
HOH
HOH
700
A
HOH
701
3
HOH
HOH
701
A
HOH
702
3
HOH
HOH
702
A
HOH
703
3
HOH
HOH
703
A
HOH
704
3
HOH
HOH
704
A
HOH
705
3
HOH
HOH
705
A
HOH
706
3
HOH
HOH
706
A
HOH
707
3
HOH
HOH
707
A
HOH
708
3
HOH
HOH
708
A
HOH
709
3
HOH
HOH
709
A
HOH
710
3
HOH
HOH
710
A
HOH
711
3
HOH
HOH
711
A
HOH
712
3
HOH
HOH
712
A
HOH
713
3
HOH
HOH
713
A
HOH
714
3
HOH
HOH
714
A
n
1
55
A
n
2
56
A
n
3
57
A
n
4
58
A
n
5
59
A
n
6
60
A
n
7
61
A
n
8
62
A
n
9
63
A
n
10
64
A
LYS
65
n
11
LYS
65
A
PRO
66
n
12
PRO
66
A
THR
67
n
13
THR
67
A
ILE
68
n
14
ILE
68
A
ALA
69
n
15
ALA
69
A
LEU
70
n
16
LEU
70
A
TYR
71
n
17
TYR
71
A
TRP
72
n
18
TRP
72
A
SER
73
n
19
SER
73
A
SER
74
n
20
SER
74
A
ASP
75
n
21
ASP
75
A
ILE
76
n
22
ILE
76
A
SER
77
n
23
SER
77
A
VAL
78
n
24
VAL
78
A
ASN
79
n
25
ASN
79
A
ILE
80
n
26
ILE
80
A
ILE
81
n
27
ILE
81
A
SER
82
n
28
SER
82
A
ARG
83
n
29
ARG
83
A
PHE
84
n
30
PHE
84
A
LEU
85
n
31
LEU
85
A
ARG
86
n
32
ARG
86
A
GLY
87
n
33
GLY
87
A
LEU
88
n
34
LEU
88
A
GLN
89
n
35
GLN
89
A
SER
90
n
36
SER
90
A
LYS
91
n
37
LYS
91
A
LEU
92
n
38
LEU
92
A
ALA
93
n
39
ALA
93
A
LYS
94
n
40
LYS
94
A
GLN
95
n
41
GLN
95
A
ASN
96
n
42
ASN
96
A
TYR
97
n
43
TYR
97
A
ASN
98
n
44
ASN
98
A
TYR
99
n
45
TYR
99
A
ASN
100
n
46
ASN
100
A
VAL
101
n
47
VAL
101
A
VAL
102
n
48
VAL
102
A
ILE
103
n
49
ILE
103
A
CYS
104
n
50
CYS
104
A
PRO
105
n
51
PRO
105
A
TYR
106
n
52
TYR
106
A
LYS
107
n
53
LYS
107
A
THR
108
n
54
THR
108
A
ASP
109
n
55
ASP
109
A
CYS
110
n
56
CYS
110
A
LEU
111
n
57
LEU
111
A
HIS
112
n
58
HIS
112
A
LEU
113
n
59
LEU
113
A
GLU
114
n
60
GLU
114
A
LYS
115
n
61
LYS
115
A
GLY
116
n
62
GLY
116
A
ILE
117
n
63
ILE
117
A
SER
118
n
64
SER
118
A
LYS
119
n
65
LYS
119
A
GLU
120
n
66
GLU
120
A
ASN
121
n
67
ASN
121
A
SER
122
n
68
SER
122
A
PHE
123
n
69
PHE
123
A
ASP
124
n
70
ASP
124
A
ALA
125
n
71
ALA
125
A
ALA
126
n
72
ALA
126
A
ILE
127
n
73
ILE
127
A
ILE
128
n
74
ILE
128
A
ALA
129
n
75
ALA
129
A
ASN
130
n
76
ASN
130
A
ILE
131
n
77
ILE
131
A
SER
132
n
78
SER
132
A
ASN
133
n
79
ASN
133
A
TYR
134
n
80
TYR
134
A
ASP
135
n
81
ASP
135
A
LEU
136
n
82
LEU
136
A
GLU
137
n
83
GLU
137
A
TYR
138
n
84
TYR
138
A
LEU
139
n
85
LEU
139
A
ASN
140
n
86
ASN
140
A
LYS
141
n
87
LYS
141
A
ALA
142
n
88
ALA
142
A
SER
143
n
89
SER
143
A
LEU
144
n
90
LEU
144
A
THR
145
n
91
THR
145
A
LEU
146
n
92
LEU
146
A
PRO
147
n
93
PRO
147
A
ILE
148
n
94
ILE
148
A
ILE
149
n
95
ILE
149
A
LEU
150
n
96
LEU
150
A
PHE
151
n
97
PHE
151
A
ASN
152
n
98
ASN
152
A
ARG
153
n
99
ARG
153
A
LEU
154
n
100
LEU
154
A
SER
155
n
101
SER
155
A
ASN
156
n
102
ASN
156
A
LYS
157
n
103
LYS
157
A
TYR
158
n
104
TYR
158
A
SER
159
n
105
SER
159
A
SER
160
n
106
SER
160
A
VAL
161
n
107
VAL
161
A
ASN
162
n
108
ASN
162
A
VAL
163
n
109
VAL
163
A
ASP
164
n
110
ASP
164
A
ASN
165
n
111
ASN
165
A
TYR
166
n
112
TYR
166
A
LYS
167
n
113
LYS
167
A
MSE
168
n
114
MSE
168
A
GLY
169
n
115
GLY
169
A
GLU
170
n
116
GLU
170
A
LYS
171
n
117
LYS
171
A
ALA
172
n
118
ALA
172
A
SER
173
n
119
SER
173
A
LEU
174
n
120
LEU
174
A
LEU
175
n
121
LEU
175
A
PHE
176
n
122
PHE
176
A
ALA
177
n
123
ALA
177
A
LYS
178
n
124
LYS
178
A
LYS
179
n
125
LYS
179
A
ARG
180
n
126
ARG
180
A
TYR
181
n
127
TYR
181
A
LYS
182
n
128
LYS
182
A
SER
183
n
129
SER
183
A
ALA
184
n
130
ALA
184
A
ALA
185
n
131
ALA
185
A
ALA
186
n
132
ALA
186
A
ILE
187
n
133
ILE
187
A
LEU
188
n
134
LEU
188
A
THR
189
n
135
THR
189
A
GLU
190
n
136
GLU
190
A
SER
191
n
137
SER
191
A
LEU
192
n
138
LEU
192
A
ASN
193
n
139
ASN
193
A
ASP
194
n
140
ASP
194
A
ALA
195
n
141
ALA
195
A
MSE
196
n
142
MSE
196
A
ASP
197
n
143
ASP
197
A
ASN
198
n
144
ASN
198
A
ARG
199
n
145
ARG
199
A
ASN
200
n
146
ASN
200
A
LYS
201
n
147
LYS
201
A
GLY
202
n
148
GLY
202
A
PHE
203
n
149
PHE
203
A
ILE
204
n
150
ILE
204
A
GLU
205
n
151
GLU
205
A
THR
206
n
152
THR
206
A
CYS
207
n
153
CYS
207
A
HIS
208
n
154
HIS
208
A
LYS
209
n
155
LYS
209
A
ASN
210
n
156
ASN
210
A
GLY
211
n
157
GLY
211
A
ILE
212
n
158
ILE
212
A
LYS
213
n
159
LYS
213
A
ILE
214
n
160
ILE
214
A
SER
215
n
161
SER
215
A
GLU
216
n
162
GLU
216
A
ASN
217
n
163
ASN
217
A
HIS
218
n
164
HIS
218
A
ILE
219
n
165
ILE
219
A
ILE
220
n
166
ILE
220
A
ALA
221
n
167
ALA
221
A
ALA
222
n
168
ALA
222
A
GLU
223
n
169
GLU
223
A
ASN
224
n
170
ASN
224
A
SER
225
n
171
SER
225
A
ILE
226
n
172
ILE
226
A
HIS
227
n
173
HIS
227
A
GLY
228
n
174
GLY
228
A
GLY
229
n
175
GLY
229
A
VAL
230
n
176
VAL
230
A
ASP
231
n
177
ASP
231
A
ALA
232
n
178
ALA
232
A
ALA
233
n
179
ALA
233
A
LYS
234
n
180
LYS
234
A
LYS
235
n
181
LYS
235
A
LEU
236
n
182
LEU
236
A
MSE
237
n
183
MSE
237
A
LYS
238
n
184
LYS
238
A
LEU
239
n
185
LEU
239
A
LYS
240
n
186
LYS
240
A
ASN
241
n
187
ASN
241
A
THR
242
n
188
THR
242
A
PRO
243
n
189
PRO
243
A
LYS
244
n
190
LYS
244
A
ALA
245
n
191
ALA
245
A
LEU
246
n
192
LEU
246
A
PHE
247
n
193
PHE
247
A
CYS
248
n
194
CYS
248
A
ASN
249
n
195
ASN
249
A
SER
250
n
196
SER
250
A
ASP
251
n
197
ASP
251
A
SER
252
n
198
SER
252
A
ILE
253
n
199
ILE
253
A
ALA
254
n
200
ALA
254
A
LEU
255
n
201
LEU
255
A
GLY
256
n
202
GLY
256
A
VAL
257
n
203
VAL
257
A
ILE
258
n
204
ILE
258
A
SER
259
n
205
SER
259
A
VAL
260
n
206
VAL
260
A
LEU
261
n
207
LEU
261
A
ASN
262
n
208
ASN
262
A
LYS
263
n
209
LYS
263
A
ARG
264
n
210
ARG
264
A
GLN
265
n
211
GLN
265
A
ILE
266
n
212
ILE
266
A
SER
267
n
213
SER
267
A
ILE
268
n
214
ILE
268
A
PRO
269
n
215
PRO
269
A
ASP
270
n
216
ASP
270
A
ASP
271
n
217
ASP
271
A
ILE
272
n
218
ILE
272
A
GLU
273
n
219
GLU
273
A
ILE
274
n
220
ILE
274
A
VAL
275
n
221
VAL
275
A
ALA
276
n
222
ALA
276
A
ILE
277
n
223
ILE
277
A
GLY
278
n
224
GLY
278
A
MSE
279
n
225
MSE
279
A
ASN
280
n
226
ASN
280
A
ASP
281
n
227
ASP
281
A
ARG
282
n
228
ARG
282
A
GLU
283
n
229
GLU
283
A
TYR
284
n
230
TYR
284
A
THR
285
n
231
THR
285
A
GLU
286
n
232
GLU
286
A
PHE
287
n
233
PHE
287
A
SER
288
n
234
SER
288
A
THR
289
n
235
THR
289
A
PRO
290
n
236
PRO
290
A
PRO
291
n
237
PRO
291
A
VAL
292
n
238
VAL
292
A
THR
293
n
239
THR
293
A
ILE
294
n
240
ILE
294
A
VAL
295
n
241
VAL
295
A
ASP
296
n
242
ASP
296
A
ILE
297
n
243
ILE
297
A
PRO
298
n
244
PRO
298
A
ILE
299
n
245
ILE
299
A
GLU
300
n
246
GLU
300
A
GLU
301
n
247
GLU
301
A
MSE
302
n
248
MSE
302
A
ALA
303
n
249
ALA
303
A
GLY
304
n
250
GLY
304
A
THR
305
n
251
THR
305
A
CYS
306
n
252
CYS
306
A
ILE
307
n
253
ILE
307
A
SER
308
n
254
SER
308
A
LEU
309
n
255
LEU
309
A
VAL
310
n
256
VAL
310
A
GLU
311
n
257
GLU
311
A
LYS
312
n
258
LYS
312
A
LEU
313
n
259
LEU
313
A
ILE
314
n
260
ILE
314
A
ASN
315
n
261
ASN
315
A
ARG
316
n
262
ARG
316
A
ASP
317
n
263
ASP
317
A
ILE
318
n
264
ILE
318
A
GLU
319
n
265
GLU
319
A
ASN
320
n
266
ASN
320
A
PRO
321
n
267
PRO
321
A
THR
322
n
268
THR
322
A
SER
323
n
269
SER
323
A
ILE
324
n
270
ILE
324
A
LEU
325
n
271
LEU
325
A
PHE
326
n
272
PHE
326
A
ASP
327
n
273
ASP
327
A
GLY
328
n
274
GLY
328
A
PRO
329
n
275
PRO
329
A
LEU
330
n
276
LEU
330
A
ILE
331
n
277
ILE
331
A
LEU
332
n
278
LEU
332
A
ARG
333
n
279
ARG
333
A
ASN
334
n
280
ASN
334
A
n
281
335
A
n
282
336
A
n
283
337
A
n
284
338
A
n
285
339
A
n
286
340
A
n
287
341
A
n
288
342
A
n
289
343
A
author_defined_assembly
1
monomeric
software_defined_assembly
PISA
2
dimeric
2820
-20.7
23110
A
MSE
168
SELENOMETHIONINE
A
MSE
114
MET
A
MSE
196
SELENOMETHIONINE
A
MSE
142
MET
A
MSE
237
SELENOMETHIONINE
A
MSE
183
MET
A
MSE
279
SELENOMETHIONINE
A
MSE
225
MET
A
MSE
302
SELENOMETHIONINE
A
MSE
248
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_566
x,-y+1,-z+1
crystal symmetry operation
0.0000000000
96.0580000000
99.9760000000
A
O
CYS
104
A
O
CYS
50
A
N
LEU
70
A
N
LEU
16
A
N
ALA
69
A
N
ALA
15
A
O
ILE
127
A
O
ILE
73
A
N
ILE
128
A
N
ILE
74
A
O
ILE
149
A
O
ILE
95
A
N
LEU
150
A
N
LEU
96
A
O
SER
159
A
O
SER
105
A
N
ASN
162
A
N
ASN
108
A
O
PHE
326
A
O
PHE
272
A
O
ILE
220
A
O
ILE
166
A
N
ALA
186
A
N
ALA
132
A
N
ILE
187
A
N
ILE
133
A
O
PHE
247
A
O
PHE
193
A
N
LEU
246
A
N
LEU
192
A
O
GLU
273
A
O
GLU
219
A
N
GLY
278
A
N
GLY
224
A
O
VAL
295
A
O
VAL
241
A
N
ILE
294
A
N
ILE
240
A
O
ILE
331
A
O
ILE
277
1
A
HOH
575
C
HOH
1
A
HOH
673
C
HOH
1
A
HOH
706
C
HOH
1
A
MSE
55
A
MSE
1
1
Y
1
A
SER
56
A
SER
2
1
Y
1
A
LEU
57
A
LEU
3
1
Y
1
A
ARG
58
A
ARG
4
1
Y
1
A
SER
59
A
SER
5
1
Y
1
A
LYS
60
A
LYS
6
1
Y
1
A
ASN
61
A
ASN
7
1
Y
1
A
SER
62
A
SER
8
1
Y
1
A
GLN
63
A
GLN
9
1
Y
1
A
SER
64
A
SER
10
1
Y
1
A
SER
335
A
SER
281
1
Y
1
A
GLU
336
A
GLU
282
1
Y
1
A
GLY
337
A
GLY
283
1
Y
1
A
HIS
338
A
HIS
284
1
Y
1
A
HIS
339
A
HIS
285
1
Y
1
A
HIS
340
A
HIS
286
1
Y
1
A
HIS
341
A
HIS
287
1
Y
1
A
HIS
342
A
HIS
288
1
Y
1
A
HIS
343
A
HIS
289
1
Y
1
A
ASN
130
-151.51
79.93
31.961
0.02
0.00
0.00
-0.02
0.00
0.00
0.963
0.939
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. Residues listed as missing in Remark 465 are due to lack of electron density. Residues with missing atoms listed in Remark 470 are due to lack of electron density for side chains and modeled as alanines.
0.23035
0.18390
0.18623
1.84
28.30
1446
26906
5.1
96.33
2.999
0.091
RANDOM
1
THROUGHOUT
SAD
0.127
0.129
0.80
0.80
1.20
Engh & Huber
MASK
1.84
28.30
214
2331
6
0
2111
0.015
0.022
2150
1.474
1.978
2906
6.227
5.000
269
37.228
25.444
90
13.324
15.000
403
15.401
15.000
9
0.094
0.200
341
0.006
0.020
1567
0.216
0.200
1057
0.308
0.200
1524
0.181
0.200
188
0.308
0.200
50
0.303
0.200
26
1.257
1.500
1393
1.814
2.000
2192
3.056
3.000
853
4.519
4.500
714
0.307
0.268
1.89
70
1441
20
71.21
32.0
1.84
28.30
3G85
26906
26906
0
0.081
1
16.3
11.5
0.403
1.84
1.92
2.89
2113
1
4.7
72.3
data collection
CBASS
phasing
SHELXD
phasing
SHARP
refinement
REFMAC
5.2.0019
data reduction
HKL-2000
data scaling
HKL-2000
Transcriptional regulator (LacI family)
Crystal structure of LacI family transcription regulator from Clostridium acetobutylicum
1
N
N
2
N
N
3
N
N
A
SER
77
A
SER
23
HELX_P
A
ASN
79
A
ASN
25
5
1
3
A
ILE
80
A
ILE
26
HELX_P
A
GLN
95
A
GLN
41
1
2
16
A
CYS
110
A
CYS
56
HELX_P
A
SER
118
A
SER
64
5
3
9
A
SER
132
A
SER
78
HELX_P
A
ALA
142
A
ALA
88
1
4
11
A
ASP
164
A
ASP
110
HELX_P
A
LYS
179
A
LYS
125
1
5
16
A
ASN
193
A
ASN
139
HELX_P
A
ASN
210
A
ASN
156
1
6
18
A
SER
215
A
SER
161
HELX_P
A
ASN
217
A
ASN
163
5
7
3
A
SER
225
A
SER
171
HELX_P
A
MSE
237
A
MSE
183
1
8
13
A
SER
250
A
SER
196
HELX_P
A
ARG
264
A
ARG
210
1
9
15
A
ARG
282
A
ARG
228
HELX_P
A
PHE
287
A
PHE
233
1
10
6
A
PRO
298
A
PRO
244
HELX_P
A
ASN
315
A
ASN
261
1
11
18
covale
1.334
both
A
LYS
167
A
C
LYS
113
1_555
A
MSE
168
A
N
MSE
114
1_555
covale
1.335
both
A
MSE
168
A
C
MSE
114
1_555
A
GLY
169
A
N
GLY
115
1_555
covale
1.334
both
A
ALA
195
A
C
ALA
141
1_555
A
MSE
196
A
N
MSE
142
1_555
covale
1.334
both
A
MSE
196
A
C
MSE
142
1_555
A
ASP
197
A
N
ASP
143
1_555
covale
1.330
both
A
LEU
236
A
C
LEU
182
1_555
A
MSE
237
A
N
MSE
183
1_555
covale
1.322
both
A
MSE
237
A
C
MSE
183
1_555
A
LYS
238
A
N
LYS
184
1_555
covale
1.330
both
A
GLY
278
A
C
GLY
224
1_555
A
MSE
279
A
N
MSE
225
1_555
covale
1.337
both
A
MSE
279
A
C
MSE
225
1_555
A
ASN
280
A
N
ASN
226
1_555
covale
1.337
both
A
GLU
301
A
C
GLU
247
1_555
A
MSE
302
A
N
MSE
248
1_555
covale
1.328
both
A
MSE
302
A
C
MSE
248
1_555
A
ALA
303
A
N
ALA
249
1_555
TRANSCRIPTION REGULATOR
Transcription regulator, PSI-II, 11230o, Structural Genomics, Protein Structure Initiative, New York SGX Research Center for Structural Genomics, NYSGXRC, New York Structural GenomiX Research Consortium, DNA-binding, Transcription, Transcription regulation
A
ILE
268
A
ILE
214
1
A
PRO
269
A
PRO
215
1.42
A
THR
289
A
THR
235
1
A
PRO
290
A
PRO
236
-3.88
A
ASN
320
A
ASN
266
1
A
PRO
321
A
PRO
267
-2.49
Q97DC5_CLOAB
UNP
1
58
Q97DC5
RSKNSQSKPTIALYWSSDISVNIISRFLRGLQSKLAKQNYNYNVVICPYKTDCLHLEKGISKENSFDAAIIANISNYDLE
YLNKASLTLPIILFNRLSNKYSSVNVDNYKMGEKASLLFAKKRYKSAAAILTESLNDAMDNRNKGFIETCHKNGIKISEN
HIIAAENSIHGGVDAAKKLMKLKNTPKALFCNSDSIALGVISVLNKRQISIPDDIEIVAIGMNDREYTEFSTPPVTIVDI
PIEEMAGTCISLVEKLINRDIENPTSILFDGPLILRNS
58
335
3G85
58
335
Q97DC5
A
1
4
281
1
expression tag
MSE
55
3G85
A
Q97DC5
UNP
1
1
expression tag
SER
56
3G85
A
Q97DC5
UNP
2
1
expression tag
LEU
57
3G85
A
Q97DC5
UNP
3
1
expression tag
GLU
336
3G85
A
Q97DC5
UNP
282
1
expression tag
GLY
337
3G85
A
Q97DC5
UNP
283
1
expression tag
HIS
338
3G85
A
Q97DC5
UNP
284
1
expression tag
HIS
339
3G85
A
Q97DC5
UNP
285
1
expression tag
HIS
340
3G85
A
Q97DC5
UNP
286
1
expression tag
HIS
341
3G85
A
Q97DC5
UNP
287
1
expression tag
HIS
342
3G85
A
Q97DC5
UNP
288
1
expression tag
HIS
343
3G85
A
Q97DC5
UNP
289
6
6
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
A
ASN
100
A
ASN
46
A
TYR
106
A
TYR
52
A
THR
67
A
THR
13
A
SER
73
A
SER
19
A
ALA
125
A
ALA
71
A
ILE
128
A
ILE
74
A
ILE
148
A
ILE
94
A
PHE
151
A
PHE
97
A
SER
159
A
SER
105
A
VAL
163
A
VAL
109
A
SER
323
A
SER
269
A
PHE
326
A
PHE
272
A
ILE
219
A
ILE
165
A
ALA
221
A
ALA
167
A
ALA
185
A
ALA
131
A
LEU
188
A
LEU
134
A
ALA
245
A
ALA
191
A
CYS
248
A
CYS
194
A
GLU
273
A
GLU
219
A
GLY
278
A
GLY
224
A
THR
293
A
THR
239
A
ASP
296
A
ASP
242
A
LEU
330
A
LEU
276
A
ILE
331
A
ILE
277
BINDING SITE FOR RESIDUE GOL A 401
A
GOL
401
Software
3
A
ASN
152
A
ASN
98
3
1_555
A
MSE
196
A
MSE
142
3
1_555
A
ARG
199
A
ARG
145
3
1_555
20
C 2 2 21