0.013175
0.007606
0.000000
0.000000
0.015213
0.000000
0.000000
0.000000
0.003092
0.000000
0.000000
0.000000
Joint Center for Structural Genomics (JCSG)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.000
90.000
120.000
75.903
75.903
323.386
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C2 H6 O2
62.068
1,2-ETHANEDIOL
ETHYLENE GLYCOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C4 H10 O3
106.120
DI(HYDROXYETHYL)ETHER
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be published
0353
Crystal structure of SusD/RagB-associated esterase-like protein (YP_001301335.1) from Bacteroides vulgatus ATCC 8482 at 1.90 A resolution
10.2210/pdb3g8y/pdb
pdb_00003g8y
100
1
Flat collimating mirror, toroid focusing mirror
CCD
2008-12-07
MARMOSAIC 325 mm CCD
Double crystal
MAD
M
x-ray
1
0.91162
1.0
0.97982
1.0
0.97966
1.0
BL9-2
SSRL
0.91162, 0.97982, 0.97966
SYNCHROTRON
SSRL BEAMLINE BL9-2
45246.867
SusD/RagB-associated esterase-like protein
UNP residues 25-414
1
man
polymer
62.068
1,2-ETHANEDIOL
12
syn
non-polymer
106.120
DI(HYDROXYETHYL)ETHER
1
syn
non-polymer
18.015
water
471
nat
water
no
yes
GYQPEKHAVVKSDRGDGRLLSTYAIVHE(MSE)LKDTHPQYAYRSG(MSE)SAQEFTQWQDGVRAA(MSE)VEI(MSE)K
FPEIKRQPSPVCVKTEKKEGYILEKWEFYPFPKSVSTFLVLKPEHLKGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDY
NNPKVS(MSE)ALN(MSE)VKEGYVAVAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLD(MSE)QV
LNW(MSE)KAQSYIRKDRIVISGFSLGTEP(MSE)(MSE)VLGVLDKDIYAFVYNDFLCQTQERAVV(MSE)TKPDKENR
RPFPNSIRHLIPGYWRYFNFPDVVASLAPRPIIFTEGGLDRDFRLVQSAYAASGKPENAEFHHYPKFADKAVRKDVEHLD
EGLDSKTYFEAVNVDPPSHYFKNELVIPWLRKVLK
GYQPEKHAVVKSDRGDGRLLSTYAIVHEMLKDTHPQYAYRSGMSAQEFTQWQDGVRAAMVEIMKFPEIKRQPSPVCVKTE
KKEGYILEKWEFYPFPKSVSTFLVLKPEHLKGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGY
VAVAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMM
VLGVLDKDIYAFVYNDFLCQTQERAVVMTKPDKENRRPFPNSIRHLIPGYWRYFNFPDVVASLAPRPIIFTEGGLDRDFR
LVQSAYAASGKPENAEFHHYPKFADKAVRKDVEHLDEGLDSKTYFEAVNVDPPSHYFKNELVIPWLRKVLK
A
393239
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
DSM 1447 / NCTC 11154
sample
8482
YP_001301335.1, BVU_4111
435590
Bacteroides vulgatus ATCC 8482
562
Escherichia coli
HK100
Plasmid
SpeedET
1
2.97
58.61
VAPOR DIFFUSION, SITTING DROP
9.0
NANODROP, 20.0% PEG 6000, 0.1M Bicine pH 9.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K
277
Joint Center for Structural Genomics
JCSG
PSI, Protein Structure Initiative
pdbx_struct_assembly_auth_evidence
software
software
struct_conn
database_2
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Author supporting evidence
Refinement description
Data collection
Derived calculations
Refinement description
Database references
Derived calculations
1
0
2009-02-24
1
1
2011-07-13
1
2
2017-10-25
1
3
2019-07-24
1
4
2023-02-01
_software.classification
_software.name
_software.classification
_software.contact_author
_software.contact_author_email
_software.language
_software.location
_software.name
_software.type
_software.version
_struct_conn.pdbx_leaving_atom_flag
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
RCSB
Y
RCSB
2009-02-12
REL
REL
EDO
1,2-ETHANEDIOL
PEG
DI(HYDROXYETHYL)ETHER
HOH
water
THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG
MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE
LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE.
THE CLONED CONSTRUCT CONTAINS RESIDUES 25-414 OF THE FULL
LENGTH PROTEIN.
EDO
1
2
EDO
EDO
1
A
EDO
2
2
EDO
EDO
2
A
EDO
3
2
EDO
EDO
3
A
EDO
4
2
EDO
EDO
4
A
EDO
5
2
EDO
EDO
5
A
EDO
6
2
EDO
EDO
6
A
EDO
7
2
EDO
EDO
7
A
EDO
8
2
EDO
EDO
8
A
EDO
9
2
EDO
EDO
9
A
EDO
10
2
EDO
EDO
10
A
EDO
11
2
EDO
EDO
11
A
EDO
12
2
EDO
EDO
12
A
PEG
13
3
PEG
PEG
13
A
HOH
14
4
HOH
HOH
14
A
HOH
15
4
HOH
HOH
15
A
HOH
16
4
HOH
HOH
16
A
HOH
17
4
HOH
HOH
17
A
HOH
18
4
HOH
HOH
18
A
HOH
19
4
HOH
HOH
19
A
HOH
20
4
HOH
HOH
20
A
HOH
21
4
HOH
HOH
21
A
HOH
22
4
HOH
HOH
22
A
HOH
23
4
HOH
HOH
23
A
HOH
24
4
HOH
HOH
24
A
HOH
415
4
HOH
HOH
415
A
HOH
416
4
HOH
HOH
416
A
HOH
417
4
HOH
HOH
417
A
HOH
418
4
HOH
HOH
418
A
HOH
419
4
HOH
HOH
419
A
HOH
420
4
HOH
HOH
420
A
HOH
421
4
HOH
HOH
421
A
HOH
422
4
HOH
HOH
422
A
HOH
423
4
HOH
HOH
423
A
HOH
424
4
HOH
HOH
424
A
HOH
425
4
HOH
HOH
425
A
HOH
426
4
HOH
HOH
426
A
HOH
427
4
HOH
HOH
427
A
HOH
428
4
HOH
HOH
428
A
HOH
429
4
HOH
HOH
429
A
HOH
430
4
HOH
HOH
430
A
HOH
431
4
HOH
HOH
431
A
HOH
432
4
HOH
HOH
432
A
HOH
433
4
HOH
HOH
433
A
HOH
434
4
HOH
HOH
434
A
HOH
435
4
HOH
HOH
435
A
HOH
436
4
HOH
HOH
436
A
HOH
437
4
HOH
HOH
437
A
HOH
438
4
HOH
HOH
438
A
HOH
439
4
HOH
HOH
439
A
HOH
440
4
HOH
HOH
440
A
HOH
441
4
HOH
HOH
441
A
HOH
442
4
HOH
HOH
442
A
HOH
443
4
HOH
HOH
443
A
HOH
444
4
HOH
HOH
444
A
HOH
445
4
HOH
HOH
445
A
HOH
446
4
HOH
HOH
446
A
HOH
447
4
HOH
HOH
447
A
HOH
448
4
HOH
HOH
448
A
HOH
449
4
HOH
HOH
449
A
HOH
450
4
HOH
HOH
450
A
HOH
451
4
HOH
HOH
451
A
HOH
452
4
HOH
HOH
452
A
HOH
453
4
HOH
HOH
453
A
HOH
454
4
HOH
HOH
454
A
HOH
455
4
HOH
HOH
455
A
HOH
456
4
HOH
HOH
456
A
HOH
457
4
HOH
HOH
457
A
HOH
458
4
HOH
HOH
458
A
HOH
459
4
HOH
HOH
459
A
HOH
460
4
HOH
HOH
460
A
HOH
461
4
HOH
HOH
461
A
HOH
462
4
HOH
HOH
462
A
HOH
463
4
HOH
HOH
463
A
HOH
464
4
HOH
HOH
464
A
HOH
465
4
HOH
HOH
465
A
HOH
466
4
HOH
HOH
466
A
HOH
467
4
HOH
HOH
467
A
HOH
468
4
HOH
HOH
468
A
HOH
469
4
HOH
HOH
469
A
HOH
470
4
HOH
HOH
470
A
HOH
471
4
HOH
HOH
471
A
HOH
472
4
HOH
HOH
472
A
HOH
473
4
HOH
HOH
473
A
HOH
474
4
HOH
HOH
474
A
HOH
475
4
HOH
HOH
475
A
HOH
476
4
HOH
HOH
476
A
HOH
477
4
HOH
HOH
477
A
HOH
478
4
HOH
HOH
478
A
HOH
479
4
HOH
HOH
479
A
HOH
480
4
HOH
HOH
480
A
HOH
481
4
HOH
HOH
481
A
HOH
482
4
HOH
HOH
482
A
HOH
483
4
HOH
HOH
483
A
HOH
484
4
HOH
HOH
484
A
HOH
25
4
HOH
HOH
485
A
HOH
26
4
HOH
HOH
486
A
HOH
27
4
HOH
HOH
487
A
HOH
28
4
HOH
HOH
488
A
HOH
29
4
HOH
HOH
489
A
HOH
30
4
HOH
HOH
490
A
HOH
31
4
HOH
HOH
491
A
HOH
32
4
HOH
HOH
492
A
HOH
33
4
HOH
HOH
493
A
HOH
34
4
HOH
HOH
494
A
HOH
35
4
HOH
HOH
495
A
HOH
36
4
HOH
HOH
496
A
HOH
37
4
HOH
HOH
497
A
HOH
38
4
HOH
HOH
498
A
HOH
39
4
HOH
HOH
499
A
HOH
40
4
HOH
HOH
500
A
HOH
41
4
HOH
HOH
501
A
HOH
42
4
HOH
HOH
502
A
HOH
43
4
HOH
HOH
503
A
HOH
44
4
HOH
HOH
504
A
HOH
45
4
HOH
HOH
505
A
HOH
46
4
HOH
HOH
506
A
HOH
47
4
HOH
HOH
507
A
HOH
48
4
HOH
HOH
508
A
HOH
49
4
HOH
HOH
509
A
HOH
50
4
HOH
HOH
510
A
HOH
51
4
HOH
HOH
511
A
HOH
52
4
HOH
HOH
512
A
HOH
53
4
HOH
HOH
513
A
HOH
54
4
HOH
HOH
514
A
HOH
55
4
HOH
HOH
515
A
HOH
56
4
HOH
HOH
516
A
HOH
57
4
HOH
HOH
517
A
HOH
58
4
HOH
HOH
518
A
HOH
59
4
HOH
HOH
519
A
HOH
60
4
HOH
HOH
520
A
HOH
61
4
HOH
HOH
521
A
HOH
62
4
HOH
HOH
522
A
HOH
63
4
HOH
HOH
523
A
HOH
64
4
HOH
HOH
524
A
HOH
65
4
HOH
HOH
525
A
HOH
66
4
HOH
HOH
526
A
HOH
67
4
HOH
HOH
527
A
HOH
68
4
HOH
HOH
528
A
HOH
69
4
HOH
HOH
529
A
HOH
70
4
HOH
HOH
530
A
HOH
71
4
HOH
HOH
531
A
HOH
72
4
HOH
HOH
532
A
HOH
73
4
HOH
HOH
533
A
HOH
74
4
HOH
HOH
534
A
HOH
75
4
HOH
HOH
535
A
HOH
76
4
HOH
HOH
536
A
HOH
77
4
HOH
HOH
537
A
HOH
78
4
HOH
HOH
538
A
HOH
79
4
HOH
HOH
539
A
HOH
80
4
HOH
HOH
540
A
HOH
81
4
HOH
HOH
541
A
HOH
82
4
HOH
HOH
542
A
HOH
83
4
HOH
HOH
543
A
HOH
84
4
HOH
HOH
544
A
HOH
85
4
HOH
HOH
545
A
HOH
86
4
HOH
HOH
546
A
HOH
87
4
HOH
HOH
547
A
HOH
88
4
HOH
HOH
548
A
HOH
89
4
HOH
HOH
549
A
HOH
90
4
HOH
HOH
550
A
HOH
91
4
HOH
HOH
551
A
HOH
92
4
HOH
HOH
552
A
HOH
93
4
HOH
HOH
553
A
HOH
94
4
HOH
HOH
554
A
HOH
95
4
HOH
HOH
555
A
HOH
96
4
HOH
HOH
556
A
HOH
97
4
HOH
HOH
557
A
HOH
98
4
HOH
HOH
558
A
HOH
99
4
HOH
HOH
559
A
HOH
100
4
HOH
HOH
560
A
HOH
101
4
HOH
HOH
561
A
HOH
102
4
HOH
HOH
562
A
HOH
103
4
HOH
HOH
563
A
HOH
104
4
HOH
HOH
564
A
HOH
105
4
HOH
HOH
565
A
HOH
106
4
HOH
HOH
566
A
HOH
107
4
HOH
HOH
567
A
HOH
108
4
HOH
HOH
568
A
HOH
109
4
HOH
HOH
569
A
HOH
110
4
HOH
HOH
570
A
HOH
111
4
HOH
HOH
571
A
HOH
112
4
HOH
HOH
572
A
HOH
113
4
HOH
HOH
573
A
HOH
114
4
HOH
HOH
574
A
HOH
115
4
HOH
HOH
575
A
HOH
116
4
HOH
HOH
576
A
HOH
117
4
HOH
HOH
577
A
HOH
118
4
HOH
HOH
578
A
HOH
119
4
HOH
HOH
579
A
HOH
120
4
HOH
HOH
580
A
HOH
121
4
HOH
HOH
581
A
HOH
122
4
HOH
HOH
582
A
HOH
123
4
HOH
HOH
583
A
HOH
124
4
HOH
HOH
584
A
HOH
125
4
HOH
HOH
585
A
HOH
126
4
HOH
HOH
586
A
HOH
127
4
HOH
HOH
587
A
HOH
128
4
HOH
HOH
588
A
HOH
129
4
HOH
HOH
589
A
HOH
130
4
HOH
HOH
590
A
HOH
131
4
HOH
HOH
591
A
HOH
132
4
HOH
HOH
592
A
HOH
133
4
HOH
HOH
593
A
HOH
134
4
HOH
HOH
594
A
HOH
135
4
HOH
HOH
595
A
HOH
136
4
HOH
HOH
596
A
HOH
137
4
HOH
HOH
597
A
HOH
138
4
HOH
HOH
598
A
HOH
139
4
HOH
HOH
599
A
HOH
140
4
HOH
HOH
600
A
HOH
141
4
HOH
HOH
601
A
HOH
142
4
HOH
HOH
602
A
HOH
143
4
HOH
HOH
603
A
HOH
144
4
HOH
HOH
604
A
HOH
145
4
HOH
HOH
605
A
HOH
146
4
HOH
HOH
606
A
HOH
147
4
HOH
HOH
607
A
HOH
148
4
HOH
HOH
608
A
HOH
149
4
HOH
HOH
609
A
HOH
150
4
HOH
HOH
610
A
HOH
151
4
HOH
HOH
611
A
HOH
152
4
HOH
HOH
612
A
HOH
153
4
HOH
HOH
613
A
HOH
154
4
HOH
HOH
614
A
HOH
155
4
HOH
HOH
615
A
HOH
156
4
HOH
HOH
616
A
HOH
157
4
HOH
HOH
617
A
HOH
158
4
HOH
HOH
618
A
HOH
159
4
HOH
HOH
619
A
HOH
160
4
HOH
HOH
620
A
HOH
161
4
HOH
HOH
621
A
HOH
162
4
HOH
HOH
622
A
HOH
163
4
HOH
HOH
623
A
HOH
164
4
HOH
HOH
624
A
HOH
165
4
HOH
HOH
625
A
HOH
166
4
HOH
HOH
626
A
HOH
167
4
HOH
HOH
627
A
HOH
168
4
HOH
HOH
628
A
HOH
169
4
HOH
HOH
629
A
HOH
170
4
HOH
HOH
630
A
HOH
171
4
HOH
HOH
631
A
HOH
172
4
HOH
HOH
632
A
HOH
173
4
HOH
HOH
633
A
HOH
174
4
HOH
HOH
634
A
HOH
175
4
HOH
HOH
635
A
HOH
176
4
HOH
HOH
636
A
HOH
177
4
HOH
HOH
637
A
HOH
178
4
HOH
HOH
638
A
HOH
179
4
HOH
HOH
639
A
HOH
180
4
HOH
HOH
640
A
HOH
181
4
HOH
HOH
641
A
HOH
182
4
HOH
HOH
642
A
HOH
183
4
HOH
HOH
643
A
HOH
184
4
HOH
HOH
644
A
HOH
185
4
HOH
HOH
645
A
HOH
186
4
HOH
HOH
646
A
HOH
187
4
HOH
HOH
647
A
HOH
188
4
HOH
HOH
648
A
HOH
189
4
HOH
HOH
649
A
HOH
190
4
HOH
HOH
650
A
HOH
191
4
HOH
HOH
651
A
HOH
192
4
HOH
HOH
652
A
HOH
193
4
HOH
HOH
653
A
HOH
194
4
HOH
HOH
654
A
HOH
195
4
HOH
HOH
655
A
HOH
196
4
HOH
HOH
656
A
HOH
197
4
HOH
HOH
657
A
HOH
198
4
HOH
HOH
658
A
HOH
199
4
HOH
HOH
659
A
HOH
200
4
HOH
HOH
660
A
HOH
201
4
HOH
HOH
661
A
HOH
202
4
HOH
HOH
662
A
HOH
203
4
HOH
HOH
663
A
HOH
204
4
HOH
HOH
664
A
HOH
205
4
HOH
HOH
665
A
HOH
206
4
HOH
HOH
666
A
HOH
207
4
HOH
HOH
667
A
HOH
208
4
HOH
HOH
668
A
HOH
209
4
HOH
HOH
669
A
HOH
210
4
HOH
HOH
670
A
HOH
211
4
HOH
HOH
671
A
HOH
212
4
HOH
HOH
672
A
HOH
213
4
HOH
HOH
673
A
HOH
214
4
HOH
HOH
674
A
HOH
215
4
HOH
HOH
675
A
HOH
216
4
HOH
HOH
676
A
HOH
217
4
HOH
HOH
677
A
HOH
218
4
HOH
HOH
678
A
HOH
219
4
HOH
HOH
679
A
HOH
220
4
HOH
HOH
680
A
HOH
221
4
HOH
HOH
681
A
HOH
222
4
HOH
HOH
682
A
HOH
223
4
HOH
HOH
683
A
HOH
224
4
HOH
HOH
684
A
HOH
225
4
HOH
HOH
685
A
HOH
226
4
HOH
HOH
686
A
HOH
227
4
HOH
HOH
687
A
HOH
228
4
HOH
HOH
688
A
HOH
229
4
HOH
HOH
689
A
HOH
230
4
HOH
HOH
690
A
HOH
231
4
HOH
HOH
691
A
HOH
232
4
HOH
HOH
692
A
HOH
233
4
HOH
HOH
693
A
HOH
234
4
HOH
HOH
694
A
HOH
235
4
HOH
HOH
695
A
HOH
236
4
HOH
HOH
696
A
HOH
237
4
HOH
HOH
697
A
HOH
238
4
HOH
HOH
698
A
HOH
239
4
HOH
HOH
699
A
HOH
240
4
HOH
HOH
700
A
HOH
241
4
HOH
HOH
701
A
HOH
242
4
HOH
HOH
702
A
HOH
243
4
HOH
HOH
703
A
HOH
244
4
HOH
HOH
704
A
HOH
245
4
HOH
HOH
705
A
HOH
246
4
HOH
HOH
706
A
HOH
247
4
HOH
HOH
707
A
HOH
248
4
HOH
HOH
708
A
HOH
249
4
HOH
HOH
709
A
HOH
250
4
HOH
HOH
710
A
HOH
251
4
HOH
HOH
711
A
HOH
252
4
HOH
HOH
712
A
HOH
253
4
HOH
HOH
713
A
HOH
254
4
HOH
HOH
714
A
HOH
255
4
HOH
HOH
715
A
HOH
256
4
HOH
HOH
716
A
HOH
257
4
HOH
HOH
717
A
HOH
258
4
HOH
HOH
718
A
HOH
259
4
HOH
HOH
719
A
HOH
260
4
HOH
HOH
720
A
HOH
261
4
HOH
HOH
721
A
HOH
262
4
HOH
HOH
722
A
HOH
263
4
HOH
HOH
723
A
HOH
264
4
HOH
HOH
724
A
HOH
265
4
HOH
HOH
725
A
HOH
266
4
HOH
HOH
726
A
HOH
267
4
HOH
HOH
727
A
HOH
268
4
HOH
HOH
728
A
HOH
269
4
HOH
HOH
729
A
HOH
270
4
HOH
HOH
730
A
HOH
271
4
HOH
HOH
731
A
HOH
272
4
HOH
HOH
732
A
HOH
273
4
HOH
HOH
733
A
HOH
274
4
HOH
HOH
734
A
HOH
275
4
HOH
HOH
735
A
HOH
276
4
HOH
HOH
736
A
HOH
277
4
HOH
HOH
737
A
HOH
278
4
HOH
HOH
738
A
HOH
279
4
HOH
HOH
739
A
HOH
280
4
HOH
HOH
740
A
HOH
281
4
HOH
HOH
741
A
HOH
282
4
HOH
HOH
742
A
HOH
283
4
HOH
HOH
743
A
HOH
284
4
HOH
HOH
744
A
HOH
285
4
HOH
HOH
745
A
HOH
286
4
HOH
HOH
746
A
HOH
287
4
HOH
HOH
747
A
HOH
288
4
HOH
HOH
748
A
HOH
289
4
HOH
HOH
749
A
HOH
290
4
HOH
HOH
750
A
HOH
291
4
HOH
HOH
751
A
HOH
292
4
HOH
HOH
752
A
HOH
293
4
HOH
HOH
753
A
HOH
294
4
HOH
HOH
754
A
HOH
295
4
HOH
HOH
755
A
HOH
296
4
HOH
HOH
756
A
HOH
297
4
HOH
HOH
757
A
HOH
298
4
HOH
HOH
758
A
HOH
299
4
HOH
HOH
759
A
HOH
300
4
HOH
HOH
760
A
HOH
301
4
HOH
HOH
761
A
HOH
302
4
HOH
HOH
762
A
HOH
303
4
HOH
HOH
763
A
HOH
304
4
HOH
HOH
764
A
HOH
305
4
HOH
HOH
765
A
HOH
306
4
HOH
HOH
766
A
HOH
307
4
HOH
HOH
767
A
HOH
308
4
HOH
HOH
768
A
HOH
309
4
HOH
HOH
769
A
HOH
310
4
HOH
HOH
770
A
HOH
311
4
HOH
HOH
771
A
HOH
312
4
HOH
HOH
772
A
HOH
313
4
HOH
HOH
773
A
HOH
314
4
HOH
HOH
774
A
HOH
315
4
HOH
HOH
775
A
HOH
316
4
HOH
HOH
776
A
HOH
317
4
HOH
HOH
777
A
HOH
318
4
HOH
HOH
778
A
HOH
319
4
HOH
HOH
779
A
HOH
320
4
HOH
HOH
780
A
HOH
321
4
HOH
HOH
781
A
HOH
322
4
HOH
HOH
782
A
HOH
323
4
HOH
HOH
783
A
HOH
324
4
HOH
HOH
784
A
HOH
325
4
HOH
HOH
785
A
HOH
326
4
HOH
HOH
786
A
HOH
327
4
HOH
HOH
787
A
HOH
328
4
HOH
HOH
788
A
HOH
329
4
HOH
HOH
789
A
HOH
330
4
HOH
HOH
790
A
HOH
331
4
HOH
HOH
791
A
HOH
332
4
HOH
HOH
792
A
HOH
333
4
HOH
HOH
793
A
HOH
334
4
HOH
HOH
794
A
HOH
335
4
HOH
HOH
795
A
HOH
336
4
HOH
HOH
796
A
HOH
337
4
HOH
HOH
797
A
HOH
338
4
HOH
HOH
798
A
HOH
339
4
HOH
HOH
799
A
HOH
340
4
HOH
HOH
800
A
HOH
341
4
HOH
HOH
801
A
HOH
342
4
HOH
HOH
802
A
HOH
343
4
HOH
HOH
803
A
HOH
344
4
HOH
HOH
804
A
HOH
345
4
HOH
HOH
805
A
HOH
346
4
HOH
HOH
806
A
HOH
347
4
HOH
HOH
807
A
HOH
348
4
HOH
HOH
808
A
HOH
349
4
HOH
HOH
809
A
HOH
350
4
HOH
HOH
810
A
HOH
351
4
HOH
HOH
811
A
HOH
352
4
HOH
HOH
812
A
HOH
353
4
HOH
HOH
813
A
HOH
354
4
HOH
HOH
814
A
HOH
355
4
HOH
HOH
815
A
HOH
356
4
HOH
HOH
816
A
HOH
357
4
HOH
HOH
817
A
HOH
358
4
HOH
HOH
818
A
HOH
359
4
HOH
HOH
819
A
HOH
360
4
HOH
HOH
820
A
HOH
361
4
HOH
HOH
821
A
HOH
362
4
HOH
HOH
822
A
HOH
363
4
HOH
HOH
823
A
HOH
364
4
HOH
HOH
824
A
HOH
365
4
HOH
HOH
825
A
HOH
366
4
HOH
HOH
826
A
HOH
367
4
HOH
HOH
827
A
HOH
368
4
HOH
HOH
828
A
HOH
369
4
HOH
HOH
829
A
HOH
370
4
HOH
HOH
830
A
HOH
371
4
HOH
HOH
831
A
HOH
372
4
HOH
HOH
832
A
HOH
373
4
HOH
HOH
833
A
HOH
374
4
HOH
HOH
834
A
HOH
375
4
HOH
HOH
835
A
HOH
376
4
HOH
HOH
836
A
HOH
377
4
HOH
HOH
837
A
HOH
378
4
HOH
HOH
838
A
HOH
379
4
HOH
HOH
839
A
HOH
380
4
HOH
HOH
840
A
HOH
381
4
HOH
HOH
841
A
HOH
382
4
HOH
HOH
842
A
HOH
383
4
HOH
HOH
843
A
HOH
384
4
HOH
HOH
844
A
HOH
385
4
HOH
HOH
845
A
HOH
386
4
HOH
HOH
846
A
HOH
387
4
HOH
HOH
847
A
HOH
388
4
HOH
HOH
848
A
HOH
389
4
HOH
HOH
849
A
HOH
390
4
HOH
HOH
850
A
HOH
391
4
HOH
HOH
851
A
HOH
392
4
HOH
HOH
852
A
HOH
393
4
HOH
HOH
853
A
HOH
394
4
HOH
HOH
854
A
HOH
395
4
HOH
HOH
855
A
HOH
396
4
HOH
HOH
856
A
HOH
397
4
HOH
HOH
857
A
HOH
398
4
HOH
HOH
858
A
HOH
399
4
HOH
HOH
859
A
HOH
400
4
HOH
HOH
860
A
HOH
401
4
HOH
HOH
861
A
HOH
402
4
HOH
HOH
862
A
HOH
403
4
HOH
HOH
863
A
HOH
404
4
HOH
HOH
864
A
HOH
405
4
HOH
HOH
865
A
HOH
406
4
HOH
HOH
866
A
HOH
407
4
HOH
HOH
867
A
HOH
408
4
HOH
HOH
868
A
HOH
409
4
HOH
HOH
869
A
HOH
410
4
HOH
HOH
870
A
HOH
411
4
HOH
HOH
871
A
HOH
412
4
HOH
HOH
872
A
HOH
413
4
HOH
HOH
873
A
HOH
414
4
HOH
HOH
874
A
GLY
0
n
1
GLY
0
A
TYR
25
n
2
TYR
25
A
GLN
26
n
3
GLN
26
A
PRO
27
n
4
PRO
27
A
GLU
28
n
5
GLU
28
A
LYS
29
n
6
LYS
29
A
HIS
30
n
7
HIS
30
A
ALA
31
n
8
ALA
31
A
VAL
32
n
9
VAL
32
A
VAL
33
n
10
VAL
33
A
LYS
34
n
11
LYS
34
A
SER
35
n
12
SER
35
A
ASP
36
n
13
ASP
36
A
ARG
37
n
14
ARG
37
A
GLY
38
n
15
GLY
38
A
ASP
39
n
16
ASP
39
A
GLY
40
n
17
GLY
40
A
ARG
41
n
18
ARG
41
A
LEU
42
n
19
LEU
42
A
LEU
43
n
20
LEU
43
A
SER
44
n
21
SER
44
A
THR
45
n
22
THR
45
A
TYR
46
n
23
TYR
46
A
ALA
47
n
24
ALA
47
A
ILE
48
n
25
ILE
48
A
VAL
49
n
26
VAL
49
A
HIS
50
n
27
HIS
50
A
GLU
51
n
28
GLU
51
A
MSE
52
n
29
MSE
52
A
LEU
53
n
30
LEU
53
A
LYS
54
n
31
LYS
54
A
ASP
55
n
32
ASP
55
A
THR
56
n
33
THR
56
A
HIS
57
n
34
HIS
57
A
PRO
58
n
35
PRO
58
A
GLN
59
n
36
GLN
59
A
TYR
60
n
37
TYR
60
A
ALA
61
n
38
ALA
61
A
TYR
62
n
39
TYR
62
A
ARG
63
n
40
ARG
63
A
SER
64
n
41
SER
64
A
GLY
65
n
42
GLY
65
A
MSE
66
n
43
MSE
66
A
SER
67
n
44
SER
67
A
ALA
68
n
45
ALA
68
A
GLN
69
n
46
GLN
69
A
GLU
70
n
47
GLU
70
A
PHE
71
n
48
PHE
71
A
THR
72
n
49
THR
72
A
GLN
73
n
50
GLN
73
A
TRP
74
n
51
TRP
74
A
GLN
75
n
52
GLN
75
A
ASP
76
n
53
ASP
76
A
GLY
77
n
54
GLY
77
A
VAL
78
n
55
VAL
78
A
ARG
79
n
56
ARG
79
A
ALA
80
n
57
ALA
80
A
ALA
81
n
58
ALA
81
A
MSE
82
n
59
MSE
82
A
VAL
83
n
60
VAL
83
A
GLU
84
n
61
GLU
84
A
ILE
85
n
62
ILE
85
A
MSE
86
n
63
MSE
86
A
LYS
87
n
64
LYS
87
A
PHE
88
n
65
PHE
88
A
PRO
89
n
66
PRO
89
A
GLU
90
n
67
GLU
90
A
ILE
91
n
68
ILE
91
A
LYS
92
n
69
LYS
92
A
ARG
93
n
70
ARG
93
A
GLN
94
n
71
GLN
94
A
PRO
95
n
72
PRO
95
A
SER
96
n
73
SER
96
A
PRO
97
n
74
PRO
97
A
VAL
98
n
75
VAL
98
A
CYS
99
n
76
CYS
99
A
VAL
100
n
77
VAL
100
A
LYS
101
n
78
LYS
101
A
THR
102
n
79
THR
102
A
GLU
103
n
80
GLU
103
A
LYS
104
n
81
LYS
104
A
LYS
105
n
82
LYS
105
A
GLU
106
n
83
GLU
106
A
GLY
107
n
84
GLY
107
A
TYR
108
n
85
TYR
108
A
ILE
109
n
86
ILE
109
A
LEU
110
n
87
LEU
110
A
GLU
111
n
88
GLU
111
A
LYS
112
n
89
LYS
112
A
TRP
113
n
90
TRP
113
A
GLU
114
n
91
GLU
114
A
PHE
115
n
92
PHE
115
A
TYR
116
n
93
TYR
116
A
PRO
117
n
94
PRO
117
A
PHE
118
n
95
PHE
118
A
PRO
119
n
96
PRO
119
A
LYS
120
n
97
LYS
120
A
SER
121
n
98
SER
121
A
VAL
122
n
99
VAL
122
A
SER
123
n
100
SER
123
A
THR
124
n
101
THR
124
A
PHE
125
n
102
PHE
125
A
LEU
126
n
103
LEU
126
A
VAL
127
n
104
VAL
127
A
LEU
128
n
105
LEU
128
A
LYS
129
n
106
LYS
129
A
PRO
130
n
107
PRO
130
A
GLU
131
n
108
GLU
131
A
HIS
132
n
109
HIS
132
A
LEU
133
n
110
LEU
133
A
LYS
134
n
111
LYS
134
A
GLY
135
n
112
GLY
135
A
ALA
136
n
113
ALA
136
A
VAL
137
n
114
VAL
137
A
PRO
138
n
115
PRO
138
A
GLY
139
n
116
GLY
139
A
VAL
140
n
117
VAL
140
A
LEU
141
n
118
LEU
141
A
CYS
142
n
119
CYS
142
A
ILE
143
n
120
ILE
143
A
PRO
144
n
121
PRO
144
A
GLY
145
n
122
GLY
145
A
SER
146
n
123
SER
146
A
GLY
147
n
124
GLY
147
A
ARG
148
n
125
ARG
148
A
THR
149
n
126
THR
149
A
LYS
150
n
127
LYS
150
A
GLU
151
n
128
GLU
151
A
GLY
152
n
129
GLY
152
A
LEU
153
n
130
LEU
153
A
VAL
154
n
131
VAL
154
A
GLY
155
n
132
GLY
155
A
GLU
156
n
133
GLU
156
A
PRO
157
n
134
PRO
157
A
GLY
158
n
135
GLY
158
A
ILE
159
n
136
ILE
159
A
CYS
160
n
137
CYS
160
A
ASP
161
n
138
ASP
161
A
LYS
162
n
139
LYS
162
A
LEU
163
n
140
LEU
163
A
THR
164
n
141
THR
164
A
GLU
165
n
142
GLU
165
A
ASP
166
n
143
ASP
166
A
TYR
167
n
144
TYR
167
A
ASN
168
n
145
ASN
168
A
ASN
169
n
146
ASN
169
A
PRO
170
n
147
PRO
170
A
LYS
171
n
148
LYS
171
A
VAL
172
n
149
VAL
172
A
SER
173
n
150
SER
173
A
MSE
174
n
151
MSE
174
A
ALA
175
n
152
ALA
175
A
LEU
176
n
153
LEU
176
A
ASN
177
n
154
ASN
177
A
MSE
178
n
155
MSE
178
A
VAL
179
n
156
VAL
179
A
LYS
180
n
157
LYS
180
A
GLU
181
n
158
GLU
181
A
GLY
182
n
159
GLY
182
A
TYR
183
n
160
TYR
183
A
VAL
184
n
161
VAL
184
A
ALA
185
n
162
ALA
185
A
VAL
186
n
163
VAL
186
A
ALA
187
n
164
ALA
187
A
VAL
188
n
165
VAL
188
A
ASP
189
n
166
ASP
189
A
ASN
190
n
167
ASN
190
A
ALA
191
n
168
ALA
191
A
ALA
192
n
169
ALA
192
A
ALA
193
n
170
ALA
193
A
GLY
194
n
171
GLY
194
A
GLU
195
n
172
GLU
195
A
ALA
196
n
173
ALA
196
A
SER
197
n
174
SER
197
A
ASP
198
n
175
ASP
198
A
LEU
199
n
176
LEU
199
A
GLU
200
n
177
GLU
200
A
CYS
201
n
178
CYS
201
A
TYR
202
n
179
TYR
202
A
ASP
203
n
180
ASP
203
A
LYS
204
n
181
LYS
204
A
GLY
205
n
182
GLY
205
A
TRP
206
n
183
TRP
206
A
ASN
207
n
184
ASN
207
A
TYR
208
n
185
TYR
208
A
ASP
209
n
186
ASP
209
A
TYR
210
n
187
TYR
210
A
ASP
211
n
188
ASP
211
A
VAL
212
n
189
VAL
212
A
VAL
213
n
190
VAL
213
A
SER
214
n
191
SER
214
A
ARG
215
n
192
ARG
215
A
PHE
216
n
193
PHE
216
A
LEU
217
n
194
LEU
217
A
LEU
218
n
195
LEU
218
A
GLU
219
n
196
GLU
219
A
LEU
220
n
197
LEU
220
A
GLY
221
n
198
GLY
221
A
TRP
222
n
199
TRP
222
A
SER
223
n
200
SER
223
A
TRP
224
n
201
TRP
224
A
LEU
225
n
202
LEU
225
A
GLY
226
n
203
GLY
226
A
TYR
227
n
204
TYR
227
A
THR
228
n
205
THR
228
A
SER
229
n
206
SER
229
A
TYR
230
n
207
TYR
230
A
LEU
231
n
208
LEU
231
A
ASP
232
n
209
ASP
232
A
MSE
233
n
210
MSE
233
A
GLN
234
n
211
GLN
234
A
VAL
235
n
212
VAL
235
A
LEU
236
n
213
LEU
236
A
ASN
237
n
214
ASN
237
A
TRP
238
n
215
TRP
238
A
MSE
239
n
216
MSE
239
A
LYS
240
n
217
LYS
240
A
ALA
241
n
218
ALA
241
A
GLN
242
n
219
GLN
242
A
SER
243
n
220
SER
243
A
TYR
244
n
221
TYR
244
A
ILE
245
n
222
ILE
245
A
ARG
246
n
223
ARG
246
A
LYS
247
n
224
LYS
247
A
ASP
248
n
225
ASP
248
A
ARG
249
n
226
ARG
249
A
ILE
250
n
227
ILE
250
A
VAL
251
n
228
VAL
251
A
ILE
252
n
229
ILE
252
A
SER
253
n
230
SER
253
A
GLY
254
n
231
GLY
254
A
PHE
255
n
232
PHE
255
A
SER
256
n
233
SER
256
A
LEU
257
n
234
LEU
257
A
GLY
258
n
235
GLY
258
A
THR
259
n
236
THR
259
A
GLU
260
n
237
GLU
260
A
PRO
261
n
238
PRO
261
A
MSE
262
n
239
MSE
262
A
MSE
263
n
240
MSE
263
A
VAL
264
n
241
VAL
264
A
LEU
265
n
242
LEU
265
A
GLY
266
n
243
GLY
266
A
VAL
267
n
244
VAL
267
A
LEU
268
n
245
LEU
268
A
ASP
269
n
246
ASP
269
A
LYS
270
n
247
LYS
270
A
ASP
271
n
248
ASP
271
A
ILE
272
n
249
ILE
272
A
TYR
273
n
250
TYR
273
A
ALA
274
n
251
ALA
274
A
PHE
275
n
252
PHE
275
A
VAL
276
n
253
VAL
276
A
TYR
277
n
254
TYR
277
A
ASN
278
n
255
ASN
278
A
ASP
279
n
256
ASP
279
A
PHE
280
n
257
PHE
280
A
LEU
281
n
258
LEU
281
A
CYS
282
n
259
CYS
282
A
GLN
283
n
260
GLN
283
A
THR
284
n
261
THR
284
A
GLN
285
n
262
GLN
285
A
GLU
286
n
263
GLU
286
A
ARG
287
n
264
ARG
287
A
ALA
288
n
265
ALA
288
A
VAL
289
n
266
VAL
289
A
VAL
290
n
267
VAL
290
A
MSE
291
n
268
MSE
291
A
THR
292
n
269
THR
292
A
LYS
293
n
270
LYS
293
A
PRO
294
n
271
PRO
294
A
ASP
295
n
272
ASP
295
A
LYS
296
n
273
LYS
296
A
GLU
297
n
274
GLU
297
A
ASN
298
n
275
ASN
298
A
ARG
299
n
276
ARG
299
A
ARG
300
n
277
ARG
300
A
PRO
301
n
278
PRO
301
A
PHE
302
n
279
PHE
302
A
PRO
303
n
280
PRO
303
A
ASN
304
n
281
ASN
304
A
SER
305
n
282
SER
305
A
ILE
306
n
283
ILE
306
A
ARG
307
n
284
ARG
307
A
HIS
308
n
285
HIS
308
A
LEU
309
n
286
LEU
309
A
ILE
310
n
287
ILE
310
A
PRO
311
n
288
PRO
311
A
GLY
312
n
289
GLY
312
A
TYR
313
n
290
TYR
313
A
TRP
314
n
291
TRP
314
A
ARG
315
n
292
ARG
315
A
TYR
316
n
293
TYR
316
A
PHE
317
n
294
PHE
317
A
ASN
318
n
295
ASN
318
A
PHE
319
n
296
PHE
319
A
PRO
320
n
297
PRO
320
A
ASP
321
n
298
ASP
321
A
VAL
322
n
299
VAL
322
A
VAL
323
n
300
VAL
323
A
ALA
324
n
301
ALA
324
A
SER
325
n
302
SER
325
A
LEU
326
n
303
LEU
326
A
ALA
327
n
304
ALA
327
A
PRO
328
n
305
PRO
328
A
ARG
329
n
306
ARG
329
A
PRO
330
n
307
PRO
330
A
ILE
331
n
308
ILE
331
A
ILE
332
n
309
ILE
332
A
PHE
333
n
310
PHE
333
A
THR
334
n
311
THR
334
A
GLU
335
n
312
GLU
335
A
GLY
336
n
313
GLY
336
A
GLY
337
n
314
GLY
337
A
LEU
338
n
315
LEU
338
A
ASP
339
n
316
ASP
339
A
ARG
340
n
317
ARG
340
A
ASP
341
n
318
ASP
341
A
PHE
342
n
319
PHE
342
A
ARG
343
n
320
ARG
343
A
LEU
344
n
321
LEU
344
A
VAL
345
n
322
VAL
345
A
GLN
346
n
323
GLN
346
A
SER
347
n
324
SER
347
A
ALA
348
n
325
ALA
348
A
TYR
349
n
326
TYR
349
A
ALA
350
n
327
ALA
350
A
ALA
351
n
328
ALA
351
A
SER
352
n
329
SER
352
A
GLY
353
n
330
GLY
353
A
LYS
354
n
331
LYS
354
A
PRO
355
n
332
PRO
355
A
GLU
356
n
333
GLU
356
A
ASN
357
n
334
ASN
357
A
ALA
358
n
335
ALA
358
A
GLU
359
n
336
GLU
359
A
PHE
360
n
337
PHE
360
A
HIS
361
n
338
HIS
361
A
HIS
362
n
339
HIS
362
A
TYR
363
n
340
TYR
363
A
PRO
364
n
341
PRO
364
A
LYS
365
n
342
LYS
365
A
PHE
366
n
343
PHE
366
A
ALA
367
n
344
ALA
367
A
ASP
368
n
345
ASP
368
A
LYS
369
n
346
LYS
369
A
ALA
370
n
347
ALA
370
A
VAL
371
n
348
VAL
371
A
ARG
372
n
349
ARG
372
A
LYS
373
n
350
LYS
373
A
ASP
374
n
351
ASP
374
A
VAL
375
n
352
VAL
375
A
GLU
376
n
353
GLU
376
A
HIS
377
n
354
HIS
377
A
LEU
378
n
355
LEU
378
A
ASP
379
n
356
ASP
379
A
GLU
380
n
357
GLU
380
A
GLY
381
n
358
GLY
381
A
LEU
382
n
359
LEU
382
A
ASP
383
n
360
ASP
383
A
SER
384
n
361
SER
384
A
LYS
385
n
362
LYS
385
A
THR
386
n
363
THR
386
A
TYR
387
n
364
TYR
387
A
PHE
388
n
365
PHE
388
A
GLU
389
n
366
GLU
389
A
ALA
390
n
367
ALA
390
A
VAL
391
n
368
VAL
391
A
ASN
392
n
369
ASN
392
A
VAL
393
n
370
VAL
393
A
ASP
394
n
371
ASP
394
A
PRO
395
n
372
PRO
395
A
PRO
396
n
373
PRO
396
A
SER
397
n
374
SER
397
A
HIS
398
n
375
HIS
398
A
TYR
399
n
376
TYR
399
A
PHE
400
n
377
PHE
400
A
LYS
401
n
378
LYS
401
A
ASN
402
n
379
ASN
402
A
GLU
403
n
380
GLU
403
A
LEU
404
n
381
LEU
404
A
VAL
405
n
382
VAL
405
A
ILE
406
n
383
ILE
406
A
PRO
407
n
384
PRO
407
A
TRP
408
n
385
TRP
408
A
LEU
409
n
386
LEU
409
A
ARG
410
n
387
ARG
410
A
LYS
411
n
388
LYS
411
A
VAL
412
n
389
VAL
412
A
LEU
413
n
390
LEU
413
A
LYS
414
n
391
LYS
414
A
author_and_software_defined_assembly
PISA
2
dimeric
gel filtration
6450
-30.7
30320
A
MSE
52
SELENOMETHIONINE
A
MSE
29
MET
A
MSE
66
SELENOMETHIONINE
A
MSE
43
MET
A
MSE
82
SELENOMETHIONINE
A
MSE
59
MET
A
MSE
86
SELENOMETHIONINE
A
MSE
63
MET
A
MSE
174
SELENOMETHIONINE
A
MSE
151
MET
A
MSE
178
SELENOMETHIONINE
A
MSE
155
MET
A
MSE
233
SELENOMETHIONINE
A
MSE
210
MET
A
MSE
239
SELENOMETHIONINE
A
MSE
216
MET
A
MSE
262
SELENOMETHIONINE
A
MSE
239
MET
A
MSE
263
SELENOMETHIONINE
A
MSE
240
MET
A
MSE
291
SELENOMETHIONINE
A
MSE
268
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.5000000000
0.8660254038
0.0000000000
0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
12_565
x,x-y+1,-z+1/6
crystal symmetry operation
-37.9515000000
65.7339262235
53.8976666667
A
N
LYS
105
A
N
LYS
82
A
O
TYR
108
A
O
TYR
85
A
N
GLU
111
A
N
GLU
88
A
O
VAL
127
A
O
VAL
104
A
N
LEU
128
A
N
LEU
105
A
O
ALA
185
A
O
ALA
162
A
O
VAL
186
A
O
VAL
163
A
N
CYS
142
A
N
CYS
119
A
N
VAL
137
A
N
VAL
114
A
O
ARG
246
A
O
ARG
223
A
N
GLY
254
A
N
GLY
231
A
O
VAL
276
A
O
VAL
253
A
N
TYR
277
A
N
TYR
254
A
O
ILE
332
A
O
ILE
309
A
N
ILE
331
A
N
ILE
308
A
O
GLU
359
A
O
GLU
336
1
A
CG
ARG
63
A
CG
ARG
40
1
Y
1
A
CD
ARG
63
A
CD
ARG
40
1
Y
1
A
NE
ARG
63
A
NE
ARG
40
1
Y
1
A
CZ
ARG
63
A
CZ
ARG
40
1
Y
1
A
NH1
ARG
63
A
NH1
ARG
40
1
Y
1
A
NH2
ARG
63
A
NH2
ARG
40
1
Y
1
A
CD
GLN
69
A
CD
GLN
46
1
Y
1
A
OE1
GLN
69
A
OE1
GLN
46
1
Y
1
A
NE2
GLN
69
A
NE2
GLN
46
1
Y
1
A
CG
GLU
90
A
CG
GLU
67
1
Y
1
A
CD
GLU
90
A
CD
GLU
67
1
Y
1
A
OE1
GLU
90
A
OE1
GLU
67
1
Y
1
A
OE2
GLU
90
A
OE2
GLU
67
1
Y
1
A
CG
LYS
92
A
CG
LYS
69
1
Y
1
A
CD
LYS
92
A
CD
LYS
69
1
Y
1
A
CE
LYS
92
A
CE
LYS
69
1
Y
1
A
NZ
LYS
92
A
NZ
LYS
69
1
Y
1
A
CG
LYS
104
A
CG
LYS
81
1
Y
1
A
CD
LYS
104
A
CD
LYS
81
1
Y
1
A
CE
LYS
104
A
CE
LYS
81
1
Y
1
A
NZ
LYS
104
A
NZ
LYS
81
1
Y
1
A
CG
GLU
106
A
CG
GLU
83
1
Y
1
A
CD
GLU
106
A
CD
GLU
83
1
Y
1
A
OE1
GLU
106
A
OE1
GLU
83
1
Y
1
A
OE2
GLU
106
A
OE2
GLU
83
1
Y
1
A
CG
LYS
134
A
CG
LYS
111
1
Y
1
A
CD
LYS
134
A
CD
LYS
111
1
Y
1
A
CE
LYS
134
A
CE
LYS
111
1
Y
1
A
NZ
LYS
134
A
NZ
LYS
111
1
Y
1
A
OD1
ASP
161
A
OD1
ASP
138
1
Y
1
A
OD2
ASP
161
A
OD2
ASP
138
1
Y
1
A
CD
LYS
270
A
CD
LYS
247
1
Y
1
A
CE
LYS
270
A
CE
LYS
247
1
Y
1
A
NZ
LYS
270
A
NZ
LYS
247
1
Y
1
A
CG
LYS
296
A
CG
LYS
273
1
Y
1
A
CD
LYS
296
A
CD
LYS
273
1
Y
1
A
CE
LYS
296
A
CE
LYS
273
1
Y
1
A
NZ
LYS
296
A
NZ
LYS
273
1
Y
1
A
CZ
ARG
315
A
CZ
ARG
292
1
Y
1
A
NH1
ARG
315
A
NH1
ARG
292
1
Y
1
A
NH2
ARG
315
A
NH2
ARG
292
1
Y
1
A
NZ
LYS
373
A
NZ
LYS
350
1
Y
1
A
NH1
ARG
410
A
NH1
ARG
387
1
Y
1
A
NH2
ARG
410
A
NH2
ARG
387
1
Y
1
A
CD
LYS
414
A
CD
LYS
391
1
Y
1
A
CE
LYS
414
A
CE
LYS
391
1
Y
1
A
NZ
LYS
414
A
NZ
LYS
391
1
Y
1
A
ARG
93
-36.02
123.28
1
A
LYS
134
-93.11
-99.67
1
A
ALA
192
83.82
-4.03
1
A
ASP
198
-113.61
-93.57
1
A
ASP
203
-162.79
-70.34
1
A
TRP
222
-108.38
-157.95
1
A
SER
256
56.29
-126.83
1
A
GLU
335
-141.32
42.93
1
A
ASN
392
70.14
42.26
92.90
25.717
9.65
0.380
0.190
0.000
0.380
0.000
-0.570
0.959
0.940
1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3. PEG MOLECULES FROM CRYSTALLIZATION AND ETHYLENE GLYCOL FROM CRYOPROTECTION ARE MODELED IN THIS STRUCTURE. 4. UNKNOWN ELECTRON DENSITY IS OBSERVED AND UNMODELED NEAR SER 256 AND HIS 398.
0.209
0.168
0.170
1.900
29.399
2257
44778
5.000
100.000
1.00
0.30
2.810
0.082
RANDOM
1
THROUGHOUT
0.00
MAD
0.119
0.120
0.800
0.800
1.200
MAXIMUM LIKELIHOOD WITH PHASES
BABINET MODEL WITH MASK
1.900
29.399
471
3632
55
0
3106
0.013
0.022
3330
0.002
0.020
2296
1.544
1.963
4511
1.025
3.000
5583
4.004
5.000
410
30.751
23.946
147
11.594
15.000
537
9.954
15.000
17
0.082
0.200
475
0.006
0.020
3711
0.002
0.020
685
0.210
0.300
711
0.178
0.300
2376
0.187
0.500
1644
0.088
0.500
1531
0.197
0.500
581
0.205
0.500
1
0.152
0.300
14
0.260
0.300
71
0.188
0.500
52
1.861
3.000
2173
0.453
3.000
804
2.602
5.000
3273
4.002
8.000
1481
4.814
11.000
1238
0.324
0.226
1.949
170
3023
3193
20
100.000
18.609
1.90
29.399
3G8Y
44914
0.143
0.143
1
4.824
7.100
100.000
0.778
1.90
1.95
1.0
23246
3207
0.778
7.20
100.00
0.681
1.95
2.00
1.1
22813
3160
0.681
7.20
100.00
0.566
2.00
2.06
1.3
22307
3071
0.566
7.30
100.00
0.459
2.06
2.12
1.6
21585
2991
0.459
7.20
100.00
0.377
2.12
2.19
2.0
20992
2894
0.377
7.30
100.00
0.328
2.19
2.27
1.7
20315
2817
0.328
7.20
100.00
0.287
2.27
2.36
2.6
19768
2732
0.287
7.20
100.00
0.240
2.36
2.45
3.1
19068
2640
0.240
7.20
100.00
0.207
2.45
2.56
3.6
18058
2509
0.207
7.20
100.00
0.179
2.56
2.69
4.2
17477
2432
0.179
7.20
100.00
0.152
2.69
2.83
5.0
16614
2315
0.152
7.20
100.00
0.123
2.83
3.00
6.0
15717
2210
0.123
7.10
100.00
0.102
3.00
3.21
7.2
14758
2077
0.102
7.10
100.00
0.079
3.21
3.47
8.8
13883
1968
0.079
7.10
100.00
0.061
3.47
3.80
11.1
12715
1807
0.061
7.00
100.00
0.056
3.80
4.25
11.5
11450
1648
0.056
6.90
100.00
0.055
4.25
4.91
11.9
10098
1475
0.055
6.80
100.00
0.060
4.91
6.01
10.5
8548
1283
0.060
6.70
100.00
0.061
6.01
8.50
10.5
6671
1041
0.061
6.40
100.00
0.053
8.50
29.399
10.8
3487
637
0.053
5.50
97.60
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
5.2.0019
refinement
P.D. Adams
PDAdams@lbl.gov
C++
http://www.phenix-online.org/
PHENIX
package
phasing
George M. Sheldrick
gsheldr@shelx.uni-ac.gwdg.de
Fortran_77
http://shelx.uni-ac.gwdg.de/SHELX/
SHELX
package
model building
D.C. & J.S. Richardson lab
molprobity@kinemage.biochem.duke.edu
http://kinemage.biochem.duke.edu/molprobity/
MolProbity
package
3beta29
data scaling
Phil R. Evans
pre@mrc-lmb.cam.ac.uk
5/04/2004
Fortran_77
http://www.ccp4.ac.uk/dist/html/scala.html
SCALA
other
3.2.5
data extraction
PDB
help@deposit.rcsb.org
June 11, 2008
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.006
data collection
MAR345
CCD
data reduction
MOSFLM
phasing
SHELXD
phasing
autoSHARP
CRYSTAL STRUCTURE OF A PUTATIVE HYDROLASE (BVU_4111) FROM BACTEROIDES VULGATUS ATCC 8482 AT 1.90 A RESOLUTION
1
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
3
N
N
4
N
N
THE RESULTS FROM SIZE EXCLUSION CHROMATOGRAPHY SUPPORT THE ASSIGNMENT OF A DIMER AS A SIGNIFICANT OLIGOMERIZATION STATE.
A
GLN
26
A
GLN
3
HELX_P
A
ALA
31
A
ALA
8
5
1
6
A
SER
44
A
SER
21
HELX_P
A
ASP
55
A
ASP
32
1
2
12
A
SER
67
A
SER
44
HELX_P
A
LYS
87
A
LYS
64
1
3
21
A
THR
149
A
THR
126
HELX_P
A
VAL
154
A
VAL
131
1
4
6
A
CYS
160
A
CYS
137
HELX_P
A
THR
164
A
THR
141
5
5
5
A
SER
173
A
SER
150
HELX_P
A
LYS
180
A
LYS
157
1
6
8
A
ALA
193
A
ALA
170
HELX_P
A
SER
197
A
SER
174
5
7
5
A
LEU
199
A
LEU
176
HELX_P
A
ASP
203
A
ASP
180
5
8
5
A
ASP
209
A
ASP
186
HELX_P
A
LEU
220
A
LEU
197
1
9
12
A
SER
223
A
SER
200
HELX_P
A
ALA
241
A
ALA
218
1
10
19
A
GLY
258
A
GLY
235
HELX_P
A
ASP
269
A
ASP
246
1
11
12
A
GLN
283
A
GLN
260
HELX_P
A
MSE
291
A
MSE
268
1
12
9
A
SER
305
A
SER
282
HELX_P
A
LEU
309
A
LEU
286
5
13
5
A
GLY
312
A
GLY
289
HELX_P
A
TYR
316
A
TYR
293
5
14
5
A
ASN
318
A
ASN
295
HELX_P
A
SER
325
A
SER
302
1
15
8
A
LEU
338
A
LEU
315
HELX_P
A
SER
352
A
SER
329
1
16
15
A
LYS
354
A
LYS
331
HELX_P
A
GLU
356
A
GLU
333
5
17
3
A
TYR
363
A
TYR
340
HELX_P
A
ALA
367
A
ALA
344
5
18
5
A
ASP
368
A
ASP
345
HELX_P
A
ARG
372
A
ARG
349
5
19
5
A
ASP
383
A
ASP
360
HELX_P
A
VAL
391
A
VAL
368
1
20
9
A
ASP
394
A
ASP
371
HELX_P
A
HIS
398
A
HIS
375
5
21
5
A
LYS
401
A
LYS
378
HELX_P
A
LEU
413
A
LEU
390
1
22
13
covale
1.326
both
A
GLU
51
A
C
GLU
28
1_555
A
MSE
52
A
N
MSE
29
1_555
covale
1.337
both
A
MSE
52
A
C
MSE
29
1_555
A
LEU
53
A
N
LEU
30
1_555
covale
1.327
both
A
GLY
65
A
C
GLY
42
1_555
A
MSE
66
A
N
MSE
43
1_555
covale
1.328
both
A
MSE
66
A
C
MSE
43
1_555
A
SER
67
A
N
SER
44
1_555
covale
1.331
both
A
ALA
81
A
C
ALA
58
1_555
A
MSE
82
A
N
MSE
59
1_555
covale
1.325
both
A
MSE
82
A
C
MSE
59
1_555
A
VAL
83
A
N
VAL
60
1_555
covale
1.329
both
A
ILE
85
A
C
ILE
62
1_555
A
MSE
86
A
N
MSE
63
1_555
covale
1.334
both
A
MSE
86
A
C
MSE
63
1_555
A
LYS
87
A
N
LYS
64
1_555
covale
1.329
both
A
SER
173
A
C
SER
150
1_555
A
MSE
174
A
N
MSE
151
1_555
covale
1.331
both
A
MSE
174
A
C
MSE
151
1_555
A
ALA
175
A
N
ALA
152
1_555
covale
1.328
both
A
A
ASN
177
A
C
ASN
154
1_555
A
MSE
178
A
N
MSE
155
1_555
covale
1.332
both
B
A
ASN
177
A
C
ASN
154
1_555
A
MSE
178
A
N
MSE
155
1_555
covale
1.330
both
A
A
MSE
178
A
C
MSE
155
1_555
A
VAL
179
A
N
VAL
156
1_555
covale
1.334
both
B
A
MSE
178
A
C
MSE
155
1_555
A
VAL
179
A
N
VAL
156
1_555
covale
1.326
both
A
ASP
232
A
C
ASP
209
1_555
A
MSE
233
A
N
MSE
210
1_555
covale
1.330
both
A
A
MSE
233
A
C
MSE
210
1_555
A
GLN
234
A
N
GLN
211
1_555
covale
1.339
both
B
A
MSE
233
A
C
MSE
210
1_555
A
GLN
234
A
N
GLN
211
1_555
covale
1.331
both
A
TRP
238
A
C
TRP
215
1_555
A
MSE
239
A
N
MSE
216
1_555
covale
1.327
both
A
MSE
239
A
C
MSE
216
1_555
A
LYS
240
A
N
LYS
217
1_555
covale
1.330
both
A
A
PRO
261
A
C
PRO
238
1_555
A
MSE
262
A
N
MSE
239
1_555
covale
1.343
both
B
A
PRO
261
A
C
PRO
238
1_555
A
MSE
262
A
N
MSE
239
1_555
covale
1.332
both
A
A
MSE
262
A
C
MSE
239
1_555
A
MSE
263
A
N
MSE
240
1_555
covale
1.335
both
B
A
MSE
262
A
C
MSE
239
1_555
A
MSE
263
A
N
MSE
240
1_555
covale
1.330
both
A
MSE
263
A
C
MSE
240
1_555
A
VAL
264
A
N
VAL
241
1_555
covale
1.334
both
A
A
VAL
290
A
C
VAL
267
1_555
A
MSE
291
A
N
MSE
268
1_555
covale
1.336
both
B
A
VAL
290
A
C
VAL
267
1_555
A
MSE
291
A
N
MSE
268
1_555
covale
1.337
both
A
A
MSE
291
A
C
MSE
268
1_555
A
THR
292
A
N
THR
269
1_555
covale
1.330
both
B
A
MSE
291
A
C
MSE
268
1_555
A
THR
292
A
N
THR
269
1_555
HYDROLASE
SUSD/RAGB-ASSOCIATED ESTERASE-LIKE PROTEIN, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-2, HYDROLASE
A
ALA
327
A
ALA
304
1
A
PRO
328
A
PRO
305
1.77
A6L7P9_BACV8
UNP
1
25
A6L7P9
YQPEKHAVVKSDRGDGRLLSTYAIVHEMLKDTHPQYAYRSGMSAQEFTQWQDGVRAAMVEIMKFPEIKRQPSPVCVKTEK
KEGYILEKWEFYPFPKSVSTFLVLKPEHLKGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYV
AVAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMV
LGVLDKDIYAFVYNDFLCQTQERAVVMTKPDKENRRPFPNSIRHLIPGYWRYFNFPDVVASLAPRPIIFTEGGLDRDFRL
VQSAYAASGKPENAEFHHYPKFADKAVRKDVEHLDEGLDSKTYFEAVNVDPPSHYFKNELVIPWLRKVLK
25
414
3G8Y
25
414
A6L7P9
A
1
2
391
1
expression tag
GLY
0
3G8Y
A
A6L7P9
UNP
1
9
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
A
VAL
98
A
VAL
75
A
LYS
105
A
LYS
82
A
TYR
108
A
TYR
85
A
PHE
115
A
PHE
92
A
SER
123
A
SER
100
A
PRO
130
A
PRO
107
A
VAL
184
A
VAL
161
A
ALA
187
A
ALA
164
A
VAL
137
A
VAL
114
A
ILE
143
A
ILE
120
A
ILE
245
A
ILE
222
A
PHE
255
A
PHE
232
A
ALA
274
A
ALA
251
A
ASN
278
A
ASN
255
A
ILE
331
A
ILE
308
A
PHE
333
A
PHE
310
A
ALA
358
A
ALA
335
A
PHE
360
A
PHE
337
BINDING SITE FOR RESIDUE EDO A 1
A
EDO
1
Software
5
BINDING SITE FOR RESIDUE EDO A 2
A
EDO
2
Software
4
BINDING SITE FOR RESIDUE EDO A 3
A
EDO
3
Software
6
BINDING SITE FOR RESIDUE EDO A 4
A
EDO
4
Software
5
BINDING SITE FOR RESIDUE EDO A 5
A
EDO
5
Software
7
BINDING SITE FOR RESIDUE EDO A 6
A
EDO
6
Software
6
BINDING SITE FOR RESIDUE EDO A 7
A
EDO
7
Software
3
BINDING SITE FOR RESIDUE EDO A 8
A
EDO
8
Software
7
BINDING SITE FOR RESIDUE EDO A 9
A
EDO
9
Software
8
BINDING SITE FOR RESIDUE EDO A 10
A
EDO
10
Software
6
BINDING SITE FOR RESIDUE EDO A 11
A
EDO
11
Software
4
BINDING SITE FOR RESIDUE EDO A 12
A
EDO
12
Software
6
BINDING SITE FOR RESIDUE PEG A 13
A
PEG
13
Software
4
A
ARG
343
A
ARG
320
5
1_555
A
ASP
374
A
ASP
351
5
1_555
A
GLU
376
A
GLU
353
5
1_555
A
LYS
411
A
LYS
388
5
12_555
A
HOH
803
O
HOH
5
1_555
A
ASP
279
A
ASP
256
4
1_555
A
PHE
280
A
PHE
257
4
1_555
A
PHE
388
A
PHE
365
4
1_555
A
HIS
398
A
HIS
375
4
1_555
A
MSE
52
A
MSE
29
6
1_555
A
ASP
55
A
ASP
32
6
1_555
A
PHE
118
A
PHE
95
6
12_565
A
PRO
119
A
PRO
96
6
12_565
A
HOH
449
O
HOH
6
1_555
A
HOH
656
O
HOH
6
1_555
A
GLY
145
A
GLY
122
5
1_555
A
SER
146
A
SER
123
5
1_555
A
ARG
148
A
ARG
125
5
1_555
A
PHE
255
A
PHE
232
5
1_555
A
HOH
788
O
HOH
5
1_555
A
ASP
211
A
ASP
188
7
12_565
A
VAL
212
A
VAL
189
7
12_565
A
ARG
215
A
ARG
192
7
12_565
A
ILE
306
A
ILE
283
7
1_555
A
HOH
517
O
HOH
7
1_555
A
HOH
523
O
HOH
7
1_555
A
HOH
567
O
HOH
7
12_565
A
TYR
60
A
TYR
37
6
1_555
A
GLY
77
A
GLY
54
6
1_555
A
GLU
84
A
GLU
61
6
1_555
A
TYR
316
A
TYR
293
6
1_555
A
HOH
851
O
HOH
6
1_555
A
HOH
871
O
HOH
6
1_555
A
LYS
87
A
LYS
64
3
1_555
A
LEU
220
A
LEU
197
3
1_555
A
GLY
221
A
GLY
198
3
1_555
A
PHE
366
A
PHE
343
7
1_555
A
VAL
371
A
VAL
348
7
1_555
A
LYS
373
A
LYS
350
7
1_555
A
GLU
389
A
GLU
366
7
1_555
A
HOH
486
O
HOH
7
1_555
A
HOH
630
O
HOH
7
1_555
A
HOH
689
O
HOH
7
1_555
A
HOH
21
O
HOH
8
12_565
A
THR
284
A
THR
261
8
1_555
A
HIS
308
A
HIS
285
8
1_555
A
ILE
310
A
ILE
287
8
1_555
A
TYR
313
A
TYR
290
8
1_555
A
TRP
314
A
TRP
291
8
1_555
A
HOH
562
O
HOH
8
1_555
A
HOH
591
O
HOH
8
1_555
A
TYR
62
A
TYR
39
6
1_555
A
SER
64
A
SER
41
6
1_555
A
ARG
343
A
ARG
320
6
1_555
A
LEU
344
A
LEU
321
6
1_555
A
HOH
554
O
HOH
6
1_555
A
HOH
650
O
HOH
6
1_555
A
GLN
26
A
GLN
3
4
5_564
A
GLY
194
A
GLY
171
4
1_555
A
GLU
195
A
GLU
172
4
1_555
A
HOH
820
O
HOH
4
1_555
A
LYS
369
A
LYS
346
6
1_555
A
ARG
372
A
ARG
349
6
1_555
A
GLU
403
A
GLU
380
6
12_555
A
PRO
407
A
PRO
384
6
12_555
A
HOH
599
O
HOH
6
1_555
A
HOH
612
O
HOH
6
1_555
A
SER
146
A
SER
123
4
1_555
A
GLY
147
A
GLY
124
4
1_555
A
ARG
148
A
ARG
125
4
1_555
A
HOH
657
O
HOH
4
1_555
178
P 61 2 2