0.013636 0.000000 0.003613 0.000000 0.009100 0.000000 0.000000 0.000000 0.017061 0.00000 0.00000 0.00000 Joint Center for Structural Genomics (JCSG) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 104.84 90.00 73.336 109.891 60.635 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Cl -1 35.453 CHLORIDE ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C17 H21 N4 O9 P 456.344 FLAVIN MONONUCLEOTIDE RIBOFLAVIN MONOPHOSPHATE non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C6 H14 O2 118.174 (4S)-2-METHYL-2,4-PENTANEDIOL non-polymer C6 H14 O2 118.174 (4R)-2-METHYLPENTANE-2,4-DIOL non-polymer C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking To be published 0353 Crystal structure of putative nitroreductase in complex with FMN (YP_001089721.1) from CLOSTRIDIUM DIFFICILE 630 at 1.35 A resolution 10.2210/pdb3gfa/pdb pdb_00003gfa 100 1 Flat mirror (vertical focusing) CCD 2008-11-14 MARMOSAIC 325 mm CCD Single crystal Si(111) bent monochromator (horizontal focusing) MAD M x-ray 1 0.91162 1.0 0.97831 1.0 0.97870 1.0 BL11-1 SSRL 0.91162,0.97831,0.97870 SYNCHROTRON SSRL BEAMLINE BL11-1 22773.963 Putative nitroreductase 2 man polymer 456.344 FLAVIN MONONUCLEOTIDE 2 syn non-polymer 35.453 CHLORIDE ION 2 syn non-polymer 92.094 GLYCEROL 3 syn non-polymer 118.174 (4S)-2-METHYL-2,4-PENTANEDIOL 1 syn non-polymer 118.174 (4R)-2-METHYLPENTANE-2,4-DIOL 1 syn non-polymer 18.015 water 347 nat water no yes G(MSE)ISDSISKRRSIRKYKNQSISHETIEKIIEAGINAPSSKNRQPWRFVVITEKEKES(MSE)LKA(MSE)SKGIQN EINDNGLLPGSRQHIAGANYTVEI(MSE)KQAPVTIFILNILGKSPLEKLSPEERFYE(MSE)AN(MSE)QSIGAAIQN (MSE)SLTAVELGLGSLWICDVYFAYRELCEWLNTDSQLVAAISLGYPDEEPSRRPRLQLSDVTEWR GMISDSISKRRSIRKYKNQSISHETIEKIIEAGINAPSSKNRQPWRFVVITEKEKESMLKAMSKGIQNEINDNGLLPGSR QHIAGANYTVEIMKQAPVTIFILNILGKSPLEKLSPEERFYEMANMQSIGAAIQNMSLTAVELGLGSLWICDVYFAYREL CEWLNTDSQLVAAISLGYPDEEPSRRPRLQLSDVTEWR A,B 391649 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample CD3205, YP_001089721.1 272563 Clostridium difficile 630 562 Escherichia Coli HK100 Plasmid SpeedET 1 2.59 52.56 VAPOR DIFFUSION, SITTING DROP 3.7 43.1000% 2-methyl-2,4-pentanediol, 0.1M phosphate-citrate pH 3.7, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K 277 Joint Center for Structural Genomics JCSG PSI, Protein Structure Initiative pdbx_struct_assembly_auth_evidence software software struct_conn database_2 struct_ref_seq_dif struct_site repository Initial release Non-polymer description Version format compliance Author supporting evidence Refinement description Data collection Derived calculations Refinement description Database references Derived calculations 1 0 2009-03-17 1 1 2011-07-13 1 2 2017-10-25 1 3 2019-07-24 1 4 2023-02-01 _software.classification _software.name _software.classification _software.contact_author _software.contact_author_email _software.language _software.location _software.name _software.type _software.version _struct_conn.pdbx_leaving_atom_flag _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y RCSB Y RCSB 2009-02-26 REL REL FMN FLAVIN MONONUCLEOTIDE CL CHLORIDE ION GOL GLYCEROL MPD (4S)-2-METHYL-2,4-PENTANEDIOL MRD (4R)-2-METHYLPENTANE-2,4-DIOL HOH water SEQUENCE THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. FMN 200 2 FMN FMN 200 A CL 198 3 CL CL 198 A GOL 199 4 GOL GOL 199 A GOL 201 4 GOL GOL 201 A GOL 202 4 GOL GOL 202 A FMN 200 2 FMN FMN 200 B CL 198 3 CL CL 198 B MPD 199 5 MPD MPD 199 B MRD 201 6 MRD MRD 201 B HOH 203 7 HOH HOH 203 A HOH 204 7 HOH HOH 204 A HOH 205 7 HOH HOH 205 A HOH 206 7 HOH HOH 206 A HOH 207 7 HOH HOH 207 A HOH 208 7 HOH HOH 208 A HOH 209 7 HOH HOH 209 A HOH 210 7 HOH HOH 210 A HOH 211 7 HOH HOH 211 A HOH 212 7 HOH HOH 212 A HOH 213 7 HOH HOH 213 A HOH 214 7 HOH HOH 214 A HOH 215 7 HOH HOH 215 A HOH 216 7 HOH HOH 216 A HOH 217 7 HOH HOH 217 A HOH 218 7 HOH HOH 218 A HOH 219 7 HOH HOH 219 A HOH 220 7 HOH HOH 220 A HOH 221 7 HOH HOH 221 A HOH 222 7 HOH HOH 222 A HOH 223 7 HOH HOH 223 A HOH 224 7 HOH HOH 224 A HOH 225 7 HOH HOH 225 A HOH 226 7 HOH HOH 226 A HOH 227 7 HOH HOH 227 A HOH 228 7 HOH HOH 228 A HOH 229 7 HOH HOH 229 A HOH 230 7 HOH HOH 230 A HOH 231 7 HOH HOH 231 A HOH 232 7 HOH HOH 232 A HOH 233 7 HOH HOH 233 A HOH 234 7 HOH HOH 234 A HOH 235 7 HOH HOH 235 A HOH 236 7 HOH HOH 236 A HOH 237 7 HOH HOH 237 A HOH 238 7 HOH HOH 238 A HOH 239 7 HOH HOH 239 A HOH 240 7 HOH HOH 240 A HOH 241 7 HOH HOH 241 A HOH 242 7 HOH HOH 242 A HOH 243 7 HOH HOH 243 A HOH 244 7 HOH HOH 244 A HOH 245 7 HOH HOH 245 A HOH 246 7 HOH HOH 246 A HOH 247 7 HOH HOH 247 A HOH 248 7 HOH HOH 248 A HOH 249 7 HOH HOH 249 A HOH 250 7 HOH HOH 250 A HOH 251 7 HOH HOH 251 A HOH 252 7 HOH HOH 252 A HOH 253 7 HOH HOH 253 A HOH 254 7 HOH HOH 254 A HOH 255 7 HOH HOH 255 A HOH 256 7 HOH HOH 256 A HOH 257 7 HOH HOH 257 A HOH 258 7 HOH HOH 258 A HOH 259 7 HOH HOH 259 A HOH 260 7 HOH HOH 260 A HOH 261 7 HOH HOH 261 A HOH 262 7 HOH HOH 262 A HOH 263 7 HOH HOH 263 A HOH 264 7 HOH HOH 264 A HOH 265 7 HOH HOH 265 A HOH 266 7 HOH HOH 266 A HOH 267 7 HOH HOH 267 A HOH 268 7 HOH HOH 268 A HOH 269 7 HOH HOH 269 A HOH 270 7 HOH HOH 270 A HOH 271 7 HOH HOH 271 A HOH 272 7 HOH HOH 272 A HOH 273 7 HOH HOH 273 A HOH 274 7 HOH HOH 274 A HOH 275 7 HOH HOH 275 A HOH 276 7 HOH HOH 276 A HOH 277 7 HOH HOH 277 A HOH 278 7 HOH HOH 278 A HOH 279 7 HOH HOH 279 A HOH 280 7 HOH HOH 280 A HOH 281 7 HOH HOH 281 A HOH 282 7 HOH HOH 282 A HOH 283 7 HOH HOH 283 A HOH 284 7 HOH HOH 284 A HOH 285 7 HOH HOH 285 A HOH 286 7 HOH HOH 286 A HOH 287 7 HOH HOH 287 A HOH 288 7 HOH HOH 288 A HOH 289 7 HOH HOH 289 A HOH 290 7 HOH HOH 290 A HOH 291 7 HOH HOH 291 A HOH 292 7 HOH HOH 292 A HOH 293 7 HOH HOH 293 A HOH 294 7 HOH HOH 294 A HOH 295 7 HOH HOH 295 A HOH 296 7 HOH HOH 296 A HOH 297 7 HOH HOH 297 A HOH 298 7 HOH HOH 298 A HOH 299 7 HOH HOH 299 A HOH 300 7 HOH HOH 300 A HOH 301 7 HOH HOH 301 A HOH 302 7 HOH HOH 302 A HOH 303 7 HOH HOH 303 A HOH 304 7 HOH HOH 304 A HOH 305 7 HOH HOH 305 A HOH 306 7 HOH HOH 306 A HOH 307 7 HOH HOH 307 A HOH 308 7 HOH HOH 308 A HOH 309 7 HOH HOH 309 A HOH 310 7 HOH HOH 310 A HOH 311 7 HOH HOH 311 A HOH 312 7 HOH HOH 312 A HOH 313 7 HOH HOH 313 A HOH 314 7 HOH HOH 314 A HOH 315 7 HOH HOH 315 A HOH 316 7 HOH HOH 316 A HOH 317 7 HOH HOH 317 A HOH 318 7 HOH HOH 318 A HOH 319 7 HOH HOH 319 A HOH 320 7 HOH HOH 320 A HOH 321 7 HOH HOH 321 A HOH 322 7 HOH HOH 322 A HOH 323 7 HOH HOH 323 A HOH 324 7 HOH HOH 324 A HOH 325 7 HOH HOH 325 A HOH 326 7 HOH HOH 326 A HOH 327 7 HOH HOH 327 A HOH 328 7 HOH HOH 328 A HOH 329 7 HOH HOH 329 A HOH 330 7 HOH HOH 330 A HOH 331 7 HOH HOH 331 A HOH 332 7 HOH HOH 332 A HOH 333 7 HOH HOH 333 A HOH 334 7 HOH HOH 334 A HOH 335 7 HOH HOH 335 A HOH 336 7 HOH HOH 336 A HOH 337 7 HOH HOH 337 A HOH 338 7 HOH HOH 338 A HOH 339 7 HOH HOH 339 A HOH 340 7 HOH HOH 340 A HOH 341 7 HOH HOH 341 A HOH 342 7 HOH HOH 342 A HOH 343 7 HOH HOH 343 A HOH 344 7 HOH HOH 344 A HOH 345 7 HOH HOH 345 A HOH 346 7 HOH HOH 346 A HOH 347 7 HOH HOH 347 A HOH 348 7 HOH HOH 348 A HOH 349 7 HOH HOH 349 A HOH 350 7 HOH HOH 350 A HOH 351 7 HOH HOH 351 A HOH 352 7 HOH HOH 352 A HOH 353 7 HOH HOH 353 A HOH 354 7 HOH HOH 354 A HOH 355 7 HOH HOH 355 A HOH 356 7 HOH HOH 356 A HOH 357 7 HOH HOH 357 A HOH 358 7 HOH HOH 358 A HOH 359 7 HOH HOH 359 A HOH 360 7 HOH HOH 360 A HOH 361 7 HOH HOH 361 A HOH 362 7 HOH HOH 362 A HOH 363 7 HOH HOH 363 A HOH 364 7 HOH HOH 364 A HOH 365 7 HOH HOH 365 A HOH 202 7 HOH HOH 202 B HOH 203 7 HOH HOH 203 B HOH 204 7 HOH HOH 204 B HOH 205 7 HOH HOH 205 B HOH 206 7 HOH HOH 206 B HOH 207 7 HOH HOH 207 B HOH 208 7 HOH HOH 208 B HOH 209 7 HOH HOH 209 B HOH 210 7 HOH HOH 210 B HOH 211 7 HOH HOH 211 B HOH 212 7 HOH HOH 212 B HOH 213 7 HOH HOH 213 B HOH 214 7 HOH HOH 214 B HOH 215 7 HOH HOH 215 B HOH 216 7 HOH HOH 216 B HOH 217 7 HOH HOH 217 B HOH 218 7 HOH HOH 218 B HOH 219 7 HOH HOH 219 B HOH 220 7 HOH HOH 220 B HOH 221 7 HOH HOH 221 B HOH 222 7 HOH HOH 222 B HOH 223 7 HOH HOH 223 B HOH 224 7 HOH HOH 224 B HOH 225 7 HOH HOH 225 B HOH 226 7 HOH HOH 226 B HOH 227 7 HOH HOH 227 B HOH 228 7 HOH HOH 228 B HOH 229 7 HOH HOH 229 B HOH 230 7 HOH HOH 230 B HOH 231 7 HOH HOH 231 B HOH 232 7 HOH HOH 232 B HOH 233 7 HOH HOH 233 B HOH 234 7 HOH HOH 234 B HOH 235 7 HOH HOH 235 B HOH 236 7 HOH HOH 236 B HOH 237 7 HOH HOH 237 B HOH 238 7 HOH HOH 238 B HOH 239 7 HOH HOH 239 B HOH 240 7 HOH HOH 240 B HOH 241 7 HOH HOH 241 B HOH 242 7 HOH HOH 242 B HOH 243 7 HOH HOH 243 B HOH 244 7 HOH HOH 244 B HOH 245 7 HOH HOH 245 B HOH 246 7 HOH HOH 246 B HOH 247 7 HOH HOH 247 B HOH 248 7 HOH HOH 248 B HOH 249 7 HOH HOH 249 B HOH 250 7 HOH HOH 250 B HOH 251 7 HOH HOH 251 B HOH 252 7 HOH HOH 252 B HOH 253 7 HOH HOH 253 B HOH 254 7 HOH HOH 254 B HOH 255 7 HOH HOH 255 B HOH 256 7 HOH HOH 256 B HOH 257 7 HOH HOH 257 B HOH 258 7 HOH HOH 258 B HOH 259 7 HOH HOH 259 B HOH 260 7 HOH HOH 260 B HOH 261 7 HOH HOH 261 B HOH 262 7 HOH HOH 262 B HOH 263 7 HOH HOH 263 B HOH 264 7 HOH HOH 264 B HOH 265 7 HOH HOH 265 B HOH 266 7 HOH HOH 266 B HOH 267 7 HOH HOH 267 B HOH 268 7 HOH HOH 268 B HOH 269 7 HOH HOH 269 B HOH 270 7 HOH HOH 270 B HOH 271 7 HOH HOH 271 B HOH 272 7 HOH HOH 272 B HOH 273 7 HOH HOH 273 B HOH 274 7 HOH HOH 274 B HOH 275 7 HOH HOH 275 B HOH 276 7 HOH HOH 276 B HOH 277 7 HOH HOH 277 B HOH 278 7 HOH HOH 278 B HOH 279 7 HOH HOH 279 B HOH 280 7 HOH HOH 280 B HOH 281 7 HOH HOH 281 B HOH 282 7 HOH HOH 282 B HOH 283 7 HOH HOH 283 B HOH 284 7 HOH HOH 284 B HOH 285 7 HOH HOH 285 B HOH 286 7 HOH HOH 286 B HOH 287 7 HOH HOH 287 B HOH 288 7 HOH HOH 288 B HOH 289 7 HOH HOH 289 B HOH 290 7 HOH HOH 290 B HOH 291 7 HOH HOH 291 B HOH 292 7 HOH HOH 292 B HOH 293 7 HOH HOH 293 B HOH 294 7 HOH HOH 294 B HOH 295 7 HOH HOH 295 B HOH 296 7 HOH HOH 296 B HOH 297 7 HOH HOH 297 B HOH 298 7 HOH HOH 298 B HOH 299 7 HOH HOH 299 B HOH 300 7 HOH HOH 300 B HOH 301 7 HOH HOH 301 B HOH 302 7 HOH HOH 302 B HOH 303 7 HOH HOH 303 B HOH 304 7 HOH HOH 304 B HOH 305 7 HOH HOH 305 B HOH 306 7 HOH HOH 306 B HOH 307 7 HOH HOH 307 B HOH 308 7 HOH HOH 308 B HOH 309 7 HOH HOH 309 B HOH 310 7 HOH HOH 310 B HOH 311 7 HOH HOH 311 B HOH 312 7 HOH HOH 312 B HOH 313 7 HOH HOH 313 B HOH 314 7 HOH HOH 314 B HOH 315 7 HOH HOH 315 B HOH 316 7 HOH HOH 316 B HOH 317 7 HOH HOH 317 B HOH 318 7 HOH HOH 318 B HOH 319 7 HOH HOH 319 B HOH 320 7 HOH HOH 320 B HOH 321 7 HOH HOH 321 B HOH 322 7 HOH HOH 322 B HOH 323 7 HOH HOH 323 B HOH 324 7 HOH HOH 324 B HOH 325 7 HOH HOH 325 B HOH 326 7 HOH HOH 326 B HOH 327 7 HOH HOH 327 B HOH 328 7 HOH HOH 328 B HOH 329 7 HOH HOH 329 B HOH 330 7 HOH HOH 330 B HOH 331 7 HOH HOH 331 B HOH 332 7 HOH HOH 332 B HOH 333 7 HOH HOH 333 B HOH 334 7 HOH HOH 334 B HOH 335 7 HOH HOH 335 B HOH 336 7 HOH HOH 336 B HOH 337 7 HOH HOH 337 B HOH 338 7 HOH HOH 338 B HOH 339 7 HOH HOH 339 B HOH 340 7 HOH HOH 340 B HOH 341 7 HOH HOH 341 B HOH 342 7 HOH HOH 342 B HOH 343 7 HOH HOH 343 B HOH 344 7 HOH HOH 344 B HOH 345 7 HOH HOH 345 B HOH 346 7 HOH HOH 346 B HOH 347 7 HOH HOH 347 B HOH 348 7 HOH HOH 348 B HOH 349 7 HOH HOH 349 B HOH 350 7 HOH HOH 350 B HOH 351 7 HOH HOH 351 B HOH 352 7 HOH HOH 352 B HOH 353 7 HOH HOH 353 B HOH 354 7 HOH HOH 354 B HOH 355 7 HOH HOH 355 B HOH 356 7 HOH HOH 356 B HOH 357 7 HOH HOH 357 B HOH 358 7 HOH HOH 358 B HOH 359 7 HOH HOH 359 B HOH 360 7 HOH HOH 360 B HOH 361 7 HOH HOH 361 B HOH 362 7 HOH HOH 362 B HOH 363 7 HOH HOH 363 B HOH 364 7 HOH HOH 364 B HOH 365 7 HOH HOH 365 B HOH 366 7 HOH HOH 366 B HOH 367 7 HOH HOH 367 B HOH 368 7 HOH HOH 368 B HOH 369 7 HOH HOH 369 B HOH 370 7 HOH HOH 370 B HOH 371 7 HOH HOH 371 B HOH 372 7 HOH HOH 372 B HOH 373 7 HOH HOH 373 B HOH 374 7 HOH HOH 374 B HOH 375 7 HOH HOH 375 B HOH 376 7 HOH HOH 376 B HOH 377 7 HOH HOH 377 B HOH 378 7 HOH HOH 378 B HOH 379 7 HOH HOH 379 B HOH 380 7 HOH HOH 380 B HOH 381 7 HOH HOH 381 B HOH 382 7 HOH HOH 382 B HOH 383 7 HOH HOH 383 B HOH 384 7 HOH HOH 384 B HOH 385 7 HOH HOH 385 B n 1 0 A MSE 1 n 2 MSE 1 A ILE 2 n 3 ILE 2 A SER 3 n 4 SER 3 A ASP 4 n 5 ASP 4 A SER 5 n 6 SER 5 A ILE 6 n 7 ILE 6 A SER 7 n 8 SER 7 A LYS 8 n 9 LYS 8 A ARG 9 n 10 ARG 9 A ARG 10 n 11 ARG 10 A SER 11 n 12 SER 11 A ILE 12 n 13 ILE 12 A ARG 13 n 14 ARG 13 A LYS 14 n 15 LYS 14 A TYR 15 n 16 TYR 15 A LYS 16 n 17 LYS 16 A ASN 17 n 18 ASN 17 A GLN 18 n 19 GLN 18 A SER 19 n 20 SER 19 A ILE 20 n 21 ILE 20 A SER 21 n 22 SER 21 A HIS 22 n 23 HIS 22 A GLU 23 n 24 GLU 23 A THR 24 n 25 THR 24 A ILE 25 n 26 ILE 25 A GLU 26 n 27 GLU 26 A LYS 27 n 28 LYS 27 A ILE 28 n 29 ILE 28 A ILE 29 n 30 ILE 29 A GLU 30 n 31 GLU 30 A ALA 31 n 32 ALA 31 A GLY 32 n 33 GLY 32 A ILE 33 n 34 ILE 33 A ASN 34 n 35 ASN 34 A ALA 35 n 36 ALA 35 A PRO 36 n 37 PRO 36 A SER 37 n 38 SER 37 A SER 38 n 39 SER 38 A LYS 39 n 40 LYS 39 A ASN 40 n 41 ASN 40 A ARG 41 n 42 ARG 41 A GLN 42 n 43 GLN 42 A PRO 43 n 44 PRO 43 A TRP 44 n 45 TRP 44 A ARG 45 n 46 ARG 45 A PHE 46 n 47 PHE 46 A VAL 47 n 48 VAL 47 A VAL 48 n 49 VAL 48 A ILE 49 n 50 ILE 49 A THR 50 n 51 THR 50 A GLU 51 n 52 GLU 51 A LYS 52 n 53 LYS 52 A GLU 53 n 54 GLU 53 A LYS 54 n 55 LYS 54 A GLU 55 n 56 GLU 55 A SER 56 n 57 SER 56 A MSE 57 n 58 MSE 57 A LEU 58 n 59 LEU 58 A LYS 59 n 60 LYS 59 A ALA 60 n 61 ALA 60 A MSE 61 n 62 MSE 61 A SER 62 n 63 SER 62 A LYS 63 n 64 LYS 63 A GLY 64 n 65 GLY 64 A ILE 65 n 66 ILE 65 A GLN 66 n 67 GLN 66 A ASN 67 n 68 ASN 67 A GLU 68 n 69 GLU 68 A ILE 69 n 70 ILE 69 A ASN 70 n 71 ASN 70 A ASP 71 n 72 ASP 71 A ASN 72 n 73 ASN 72 A GLY 73 n 74 GLY 73 A LEU 74 n 75 LEU 74 A LEU 75 n 76 LEU 75 A PRO 76 n 77 PRO 76 A GLY 77 n 78 GLY 77 A SER 78 n 79 SER 78 A ARG 79 n 80 ARG 79 A GLN 80 n 81 GLN 80 A HIS 81 n 82 HIS 81 A ILE 82 n 83 ILE 82 A ALA 83 n 84 ALA 83 A GLY 84 n 85 GLY 84 A ALA 85 n 86 ALA 85 A ASN 86 n 87 ASN 86 A TYR 87 n 88 TYR 87 A THR 88 n 89 THR 88 A VAL 89 n 90 VAL 89 A GLU 90 n 91 GLU 90 A ILE 91 n 92 ILE 91 A MSE 92 n 93 MSE 92 A LYS 93 n 94 LYS 93 A GLN 94 n 95 GLN 94 A ALA 95 n 96 ALA 95 A PRO 96 n 97 PRO 96 A VAL 97 n 98 VAL 97 A THR 98 n 99 THR 98 A ILE 99 n 100 ILE 99 A PHE 100 n 101 PHE 100 A ILE 101 n 102 ILE 101 A LEU 102 n 103 LEU 102 A ASN 103 n 104 ASN 103 A ILE 104 n 105 ILE 104 A LEU 105 n 106 LEU 105 A GLY 106 n 107 GLY 106 A LYS 107 n 108 LYS 107 A SER 108 n 109 SER 108 A PRO 109 n 110 PRO 109 A LEU 110 n 111 LEU 110 A GLU 111 n 112 GLU 111 A LYS 112 n 113 LYS 112 A LEU 113 n 114 LEU 113 A SER 114 n 115 SER 114 A PRO 115 n 116 PRO 115 A GLU 116 n 117 GLU 116 A GLU 117 n 118 GLU 117 A ARG 118 n 119 ARG 118 A PHE 119 n 120 PHE 119 A TYR 120 n 121 TYR 120 A GLU 121 n 122 GLU 121 A MSE 122 n 123 MSE 122 A ALA 123 n 124 ALA 123 A ASN 124 n 125 ASN 124 A MSE 125 n 126 MSE 125 A GLN 126 n 127 GLN 126 A SER 127 n 128 SER 127 A ILE 128 n 129 ILE 128 A GLY 129 n 130 GLY 129 A ALA 130 n 131 ALA 130 A ALA 131 n 132 ALA 131 A ILE 132 n 133 ILE 132 A GLN 133 n 134 GLN 133 A ASN 134 n 135 ASN 134 A MSE 135 n 136 MSE 135 A SER 136 n 137 SER 136 A LEU 137 n 138 LEU 137 A THR 138 n 139 THR 138 A ALA 139 n 140 ALA 139 A VAL 140 n 141 VAL 140 A GLU 141 n 142 GLU 141 A LEU 142 n 143 LEU 142 A GLY 143 n 144 GLY 143 A LEU 144 n 145 LEU 144 A GLY 145 n 146 GLY 145 A SER 146 n 147 SER 146 A LEU 147 n 148 LEU 147 A TRP 148 n 149 TRP 148 A ILE 149 n 150 ILE 149 A CYS 150 n 151 CYS 150 A ASP 151 n 152 ASP 151 A VAL 152 n 153 VAL 152 A TYR 153 n 154 TYR 153 A PHE 154 n 155 PHE 154 A ALA 155 n 156 ALA 155 A TYR 156 n 157 TYR 156 A ARG 157 n 158 ARG 157 A GLU 158 n 159 GLU 158 A LEU 159 n 160 LEU 159 A CYS 160 n 161 CYS 160 A GLU 161 n 162 GLU 161 A TRP 162 n 163 TRP 162 A LEU 163 n 164 LEU 163 A ASN 164 n 165 ASN 164 A THR 165 n 166 THR 165 A ASP 166 n 167 ASP 166 A SER 167 n 168 SER 167 A GLN 168 n 169 GLN 168 A LEU 169 n 170 LEU 169 A VAL 170 n 171 VAL 170 A ALA 171 n 172 ALA 171 A ALA 172 n 173 ALA 172 A ILE 173 n 174 ILE 173 A SER 174 n 175 SER 174 A LEU 175 n 176 LEU 175 A GLY 176 n 177 GLY 176 A TYR 177 n 178 TYR 177 A PRO 178 n 179 PRO 178 A ASP 179 n 180 ASP 179 A GLU 180 n 181 GLU 180 A GLU 181 n 182 GLU 181 A PRO 182 n 183 PRO 182 A SER 183 n 184 SER 183 A ARG 184 n 185 ARG 184 A ARG 185 n 186 ARG 185 A PRO 186 n 187 PRO 186 A ARG 187 n 188 ARG 187 A LEU 188 n 189 LEU 188 A GLN 189 n 190 GLN 189 A LEU 190 n 191 LEU 190 A SER 191 n 192 SER 191 A ASP 192 n 193 ASP 192 A VAL 193 n 194 VAL 193 A THR 194 n 195 THR 194 A GLU 195 n 196 GLU 195 A TRP 196 n 197 TRP 196 A ARG 197 n 198 ARG 197 A n 1 0 B n 2 1 B ILE 2 n 3 ILE 2 B SER 3 n 4 SER 3 B ASP 4 n 5 ASP 4 B SER 5 n 6 SER 5 B ILE 6 n 7 ILE 6 B SER 7 n 8 SER 7 B LYS 8 n 9 LYS 8 B ARG 9 n 10 ARG 9 B ARG 10 n 11 ARG 10 B SER 11 n 12 SER 11 B ILE 12 n 13 ILE 12 B ARG 13 n 14 ARG 13 B LYS 14 n 15 LYS 14 B TYR 15 n 16 TYR 15 B LYS 16 n 17 LYS 16 B ASN 17 n 18 ASN 17 B GLN 18 n 19 GLN 18 B SER 19 n 20 SER 19 B ILE 20 n 21 ILE 20 B SER 21 n 22 SER 21 B HIS 22 n 23 HIS 22 B GLU 23 n 24 GLU 23 B THR 24 n 25 THR 24 B ILE 25 n 26 ILE 25 B GLU 26 n 27 GLU 26 B LYS 27 n 28 LYS 27 B ILE 28 n 29 ILE 28 B ILE 29 n 30 ILE 29 B GLU 30 n 31 GLU 30 B ALA 31 n 32 ALA 31 B GLY 32 n 33 GLY 32 B ILE 33 n 34 ILE 33 B ASN 34 n 35 ASN 34 B ALA 35 n 36 ALA 35 B PRO 36 n 37 PRO 36 B SER 37 n 38 SER 37 B SER 38 n 39 SER 38 B LYS 39 n 40 LYS 39 B ASN 40 n 41 ASN 40 B ARG 41 n 42 ARG 41 B GLN 42 n 43 GLN 42 B PRO 43 n 44 PRO 43 B TRP 44 n 45 TRP 44 B ARG 45 n 46 ARG 45 B PHE 46 n 47 PHE 46 B VAL 47 n 48 VAL 47 B VAL 48 n 49 VAL 48 B ILE 49 n 50 ILE 49 B THR 50 n 51 THR 50 B GLU 51 n 52 GLU 51 B LYS 52 n 53 LYS 52 B GLU 53 n 54 GLU 53 B LYS 54 n 55 LYS 54 B GLU 55 n 56 GLU 55 B SER 56 n 57 SER 56 B MSE 57 n 58 MSE 57 B LEU 58 n 59 LEU 58 B LYS 59 n 60 LYS 59 B ALA 60 n 61 ALA 60 B MSE 61 n 62 MSE 61 B SER 62 n 63 SER 62 B LYS 63 n 64 LYS 63 B GLY 64 n 65 GLY 64 B ILE 65 n 66 ILE 65 B GLN 66 n 67 GLN 66 B ASN 67 n 68 ASN 67 B GLU 68 n 69 GLU 68 B ILE 69 n 70 ILE 69 B ASN 70 n 71 ASN 70 B ASP 71 n 72 ASP 71 B ASN 72 n 73 ASN 72 B GLY 73 n 74 GLY 73 B LEU 74 n 75 LEU 74 B LEU 75 n 76 LEU 75 B PRO 76 n 77 PRO 76 B GLY 77 n 78 GLY 77 B SER 78 n 79 SER 78 B ARG 79 n 80 ARG 79 B GLN 80 n 81 GLN 80 B HIS 81 n 82 HIS 81 B ILE 82 n 83 ILE 82 B ALA 83 n 84 ALA 83 B GLY 84 n 85 GLY 84 B ALA 85 n 86 ALA 85 B ASN 86 n 87 ASN 86 B TYR 87 n 88 TYR 87 B THR 88 n 89 THR 88 B VAL 89 n 90 VAL 89 B GLU 90 n 91 GLU 90 B ILE 91 n 92 ILE 91 B MSE 92 n 93 MSE 92 B LYS 93 n 94 LYS 93 B GLN 94 n 95 GLN 94 B ALA 95 n 96 ALA 95 B PRO 96 n 97 PRO 96 B VAL 97 n 98 VAL 97 B THR 98 n 99 THR 98 B ILE 99 n 100 ILE 99 B PHE 100 n 101 PHE 100 B ILE 101 n 102 ILE 101 B LEU 102 n 103 LEU 102 B ASN 103 n 104 ASN 103 B ILE 104 n 105 ILE 104 B LEU 105 n 106 LEU 105 B GLY 106 n 107 GLY 106 B LYS 107 n 108 LYS 107 B SER 108 n 109 SER 108 B PRO 109 n 110 PRO 109 B LEU 110 n 111 LEU 110 B GLU 111 n 112 GLU 111 B LYS 112 n 113 LYS 112 B LEU 113 n 114 LEU 113 B SER 114 n 115 SER 114 B PRO 115 n 116 PRO 115 B GLU 116 n 117 GLU 116 B GLU 117 n 118 GLU 117 B ARG 118 n 119 ARG 118 B PHE 119 n 120 PHE 119 B TYR 120 n 121 TYR 120 B GLU 121 n 122 GLU 121 B MSE 122 n 123 MSE 122 B ALA 123 n 124 ALA 123 B ASN 124 n 125 ASN 124 B MSE 125 n 126 MSE 125 B GLN 126 n 127 GLN 126 B SER 127 n 128 SER 127 B ILE 128 n 129 ILE 128 B GLY 129 n 130 GLY 129 B ALA 130 n 131 ALA 130 B ALA 131 n 132 ALA 131 B ILE 132 n 133 ILE 132 B GLN 133 n 134 GLN 133 B ASN 134 n 135 ASN 134 B MSE 135 n 136 MSE 135 B SER 136 n 137 SER 136 B LEU 137 n 138 LEU 137 B THR 138 n 139 THR 138 B ALA 139 n 140 ALA 139 B VAL 140 n 141 VAL 140 B GLU 141 n 142 GLU 141 B LEU 142 n 143 LEU 142 B GLY 143 n 144 GLY 143 B LEU 144 n 145 LEU 144 B GLY 145 n 146 GLY 145 B SER 146 n 147 SER 146 B LEU 147 n 148 LEU 147 B TRP 148 n 149 TRP 148 B ILE 149 n 150 ILE 149 B CYS 150 n 151 CYS 150 B ASP 151 n 152 ASP 151 B VAL 152 n 153 VAL 152 B TYR 153 n 154 TYR 153 B PHE 154 n 155 PHE 154 B ALA 155 n 156 ALA 155 B TYR 156 n 157 TYR 156 B ARG 157 n 158 ARG 157 B GLU 158 n 159 GLU 158 B LEU 159 n 160 LEU 159 B CYS 160 n 161 CYS 160 B GLU 161 n 162 GLU 161 B TRP 162 n 163 TRP 162 B LEU 163 n 164 LEU 163 B ASN 164 n 165 ASN 164 B THR 165 n 166 THR 165 B ASP 166 n 167 ASP 166 B SER 167 n 168 SER 167 B GLN 168 n 169 GLN 168 B LEU 169 n 170 LEU 169 B VAL 170 n 171 VAL 170 B ALA 171 n 172 ALA 171 B ALA 172 n 173 ALA 172 B ILE 173 n 174 ILE 173 B SER 174 n 175 SER 174 B LEU 175 n 176 LEU 175 B GLY 176 n 177 GLY 176 B TYR 177 n 178 TYR 177 B PRO 178 n 179 PRO 178 B ASP 179 n 180 ASP 179 B GLU 180 n 181 GLU 180 B GLU 181 n 182 GLU 181 B PRO 182 n 183 PRO 182 B SER 183 n 184 SER 183 B ARG 184 n 185 ARG 184 B ARG 185 n 186 ARG 185 B PRO 186 n 187 PRO 186 B ARG 187 n 188 ARG 187 B LEU 188 n 189 LEU 188 B GLN 189 n 190 GLN 189 B LEU 190 n 191 LEU 190 B SER 191 n 192 SER 191 B ASP 192 n 193 ASP 192 B VAL 193 n 194 VAL 193 B THR 194 n 195 THR 194 B GLU 195 n 196 GLU 195 B TRP 196 n 197 TRP 196 B ARG 197 n 198 ARG 197 B author_and_software_defined_assembly PISA 2 dimeric gel filtration 10960 -74 14740 A MSE 1 SELENOMETHIONINE A MSE 2 MET A MSE 57 SELENOMETHIONINE A MSE 58 MET A MSE 61 SELENOMETHIONINE A MSE 62 MET A MSE 92 SELENOMETHIONINE A MSE 93 MET A MSE 122 SELENOMETHIONINE A MSE 123 MET A MSE 125 SELENOMETHIONINE A MSE 126 MET A MSE 135 SELENOMETHIONINE A MSE 136 MET B MSE 57 SELENOMETHIONINE B MSE 58 MET B MSE 61 SELENOMETHIONINE B MSE 62 MET B MSE 92 SELENOMETHIONINE B MSE 93 MET B MSE 122 SELENOMETHIONINE B MSE 123 MET B MSE 125 SELENOMETHIONINE B MSE 126 MET B MSE 135 SELENOMETHIONINE B MSE 136 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N GLY 145 A N GLY 146 A O GLY 176 A O GLY 177 A O ALA 171 A O ALA 172 A N ILE 101 A N ILE 102 A O LEU 102 A O LEU 103 A N ARG 45 A N ARG 46 A N VAL 48 A N VAL 49 B O ARG 197 B O ARG 198 A N ARG 197 A N ARG 198 B O VAL 48 B O VAL 49 B N ILE 49 B N ILE 50 B O THR 98 B O THR 99 B N ILE 101 B N ILE 102 B O ALA 171 B O ALA 172 B O GLY 176 B O GLY 177 B N GLY 145 B N GLY 146 1 A HOH 220 L HOH 1 A CG MSE 1 A CG MSE 2 1 Y 1 A SE MSE 1 A SE MSE 2 1 Y 1 A CE MSE 1 A CE MSE 2 1 Y 1 A CB ILE 2 A CB ILE 3 1 Y 1 A CG1 ILE 2 A CG1 ILE 3 1 Y 1 A CG2 ILE 2 A CG2 ILE 3 1 Y 1 A CD1 ILE 2 A CD1 ILE 3 1 Y 1 A OG SER 3 A OG SER 4 1 Y 1 A CD LYS 8 A CD LYS 9 1 Y 1 A CE LYS 8 A CE LYS 9 1 Y 1 A NZ LYS 8 A NZ LYS 9 1 Y 1 A CE LYS 14 A CE LYS 15 1 Y 1 A NZ LYS 14 A NZ LYS 15 1 Y 1 A CG GLU 51 A CG GLU 52 1 Y 1 A CD GLU 51 A CD GLU 52 1 Y 1 A OE1 GLU 51 A OE1 GLU 52 1 Y 1 A OE2 GLU 51 A OE2 GLU 52 1 Y 1 A CE LYS 52 A CE LYS 53 1 Y 1 A NZ LYS 52 A NZ LYS 53 1 Y 1 A CD GLU 55 A CD GLU 56 1 Y 1 A OE1 GLU 55 A OE1 GLU 56 1 Y 1 A OE2 GLU 55 A OE2 GLU 56 1 Y 1 A CG LYS 59 A CG LYS 60 1 Y 1 A CD LYS 59 A CD LYS 60 1 Y 1 A CE LYS 59 A CE LYS 60 1 Y 1 A NZ LYS 59 A NZ LYS 60 1 Y 1 A CD LYS 63 A CD LYS 64 1 Y 1 A CE LYS 63 A CE LYS 64 1 Y 1 A NZ LYS 63 A NZ LYS 64 1 Y 1 A CD GLU 141 A CD GLU 142 1 Y 1 A OE1 GLU 141 A OE1 GLU 142 1 Y 1 A OE2 GLU 141 A OE2 GLU 142 1 Y 1 A CD GLU 181 A CD GLU 182 1 Y 1 A OE1 GLU 181 A OE1 GLU 182 1 Y 1 A OE2 GLU 181 A OE2 GLU 182 1 Y 1 B CG1 ILE 2 B CG1 ILE 3 1 Y 1 B CG2 ILE 2 B CG2 ILE 3 1 Y 1 B CD1 ILE 2 B CD1 ILE 3 1 Y 1 B OG SER 3 B OG SER 4 1 Y 1 B CD LYS 8 B CD LYS 9 1 Y 1 B CE LYS 8 B CE LYS 9 1 Y 1 B NZ LYS 8 B NZ LYS 9 1 Y 1 B NZ LYS 14 B NZ LYS 15 1 Y 1 B CE LYS 52 B CE LYS 53 1 Y 1 B NZ LYS 52 B NZ LYS 53 1 Y 1 B CD LYS 59 B CD LYS 60 1 Y 1 B CE LYS 59 B CE LYS 60 1 Y 1 B NZ LYS 59 B NZ LYS 60 1 Y 1 B NZ LYS 63 B NZ LYS 64 1 Y 1 B NE ARG 184 B NE ARG 185 1 Y 1 B CZ ARG 184 B CZ ARG 185 1 Y 1 B NH1 ARG 184 B NH1 ARG 185 1 Y 1 B NH2 ARG 184 B NH2 ARG 185 1 Y 1 A GLY 0 A GLY 1 1 Y 1 B GLY 0 B GLY 1 1 Y 1 B MSE 1 B MSE 2 1 Y 1 3.16 0.50 120.30 123.46 A A A NE CZ NH1 ARG ARG ARG 41 41 41 A A A N 73.03 18.461 6.86 -0.400 0.000 -0.960 -0.380 0.000 0.290 0.979 0.973 1.HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 2.A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. A FLAVIN MONONUCLEOTIDE (FMN) AND A CHLORIDE ION IS BOUND TO EACH OF THE TWO ACTIVE SITES WITHIN THE DIMER. 5.(4S)-2-METHYL-2,4-PENTANEDIOL (MPD) AND GLYCEROL FROM THE CRYSTALLIZATION/CRYOPROTECTANT SOLUTIONS ARE MODELED INTO THE STRUCTURE. 6. A MODIFIED FMN RESTRAINTS DICTIONARY WAS USED DURING THE REFINEMENT TO ALLOW BENDING OF THE FMN RING ALONG THE N5-N10 VIRTUAL AXIS. THIS RESULTS IN AN IMPROVED FIT BETWEEN THE FMN COORDINATE MODEL AND ELECTRON DENSITY. 0.157 0.134 0.135 1.350 29.988 4983 99648 5.000 98.220 1.00 0.25 1.593 0.028 RANDOM 1 THROUGHOUT 0.00 MAD 0.047 0.044 0.800 0.800 1.200 MAXIMUM LIKELIHOOD WITH PHASES MASK 1.350 29.988 347 3522 98 0 3077 0.015 0.022 3627 0.002 0.020 2504 1.504 1.997 5001 0.941 3.000 6193 5.547 5.000 494 35.420 24.765 170 12.780 15.000 670 13.771 15.000 26 0.086 0.200 547 0.008 0.020 4085 0.002 0.020 689 0.223 0.200 792 0.201 0.200 2835 0.185 0.200 1754 0.089 0.200 1944 0.150 0.200 276 0.267 0.200 29 0.225 0.200 86 0.205 0.200 33 1.932 2.000 2222 1.026 2.000 847 2.610 3.000 3550 2.093 2.000 1623 2.876 3.000 1398 1.335 3.000 6794 7.409 3.000 351 3.701 3.000 6012 0.259 0.258 1.385 283 5838 6121 20 81.830 14.166 1.35 29.988 3GFA 99649 0.082 0.082 1 3.938 3.700 98.200 0.496 1.35 1.39 1.5 18207 6124 0.496 1 3.00 81.90 0.450 1.39 1.42 1.7 23211 6827 0.450 1 3.40 94.00 0.389 1.42 1.46 1.9 26606 7132 0.389 1 3.70 100.00 0.291 1.46 1.51 2.6 25855 6896 0.291 1 3.70 100.00 0.235 1.51 1.56 3.1 25103 6688 0.235 1 3.80 100.00 0.204 1.56 1.61 3.6 24259 6459 0.204 1 3.80 100.00 0.174 1.61 1.67 4.1 23581 6237 0.174 1 3.80 100.00 0.150 1.67 1.74 4.6 22837 6044 0.150 1 3.80 100.00 0.128 1.74 1.82 5.3 21681 5719 0.128 1 3.80 100.00 0.111 1.82 1.91 5.8 20846 5505 0.111 1 3.80 100.00 0.096 1.91 2.01 6.3 19888 5249 0.096 1 3.80 100.00 0.084 2.01 2.13 7.2 18854 4967 0.084 1 3.80 100.00 0.081 2.13 2.28 7.2 17732 4691 0.081 1 3.80 100.00 0.079 2.28 2.46 7.6 16157 4318 0.079 1 3.70 100.00 0.075 2.46 2.70 7.4 14887 3977 0.075 1 3.70 100.00 0.069 2.70 3.02 8.5 13670 3643 0.069 1 3.80 100.00 0.065 3.02 3.49 8.4 12086 3203 0.065 1 3.80 100.00 0.064 3.49 4.27 8.4 10119 2697 0.064 1 3.80 100.00 0.066 4.27 6.04 8.0 7838 2118 0.066 1 3.70 100.00 0.066 6.04 29.99 8.2 4089 1155 0.066 1 3.50 99.20 refinement Garib N. Murshudov garib@ysbl.york.ac.uk Fortran_77 http://www.ccp4.ac.uk/dist/html/refmac5.html REFMAC program 5.2.0019 refinement P.D. Adams PDAdams@lbl.gov C++ http://www.phenix-online.org/ PHENIX package phasing Tom Terwilliger terwilliger@LANL.gov http://www.solve.lanl.gov/ SOLVE program model building D.C. & J.S. Richardson lab molprobity@kinemage.biochem.duke.edu http://kinemage.biochem.duke.edu/molprobity/ MolProbity package 3beta29 data scaling Phil R. Evans pre@mrc-lmb.cam.ac.uk 5/04/2004 Fortran_77 http://www.ccp4.ac.uk/dist/html/scala.html SCALA other 3.2.5 data extraction PDB help@deposit.rcsb.org June 11, 2008 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.006 data reduction MOSFLM Crystal structure of a putative nitroreductase in complex with fmn (cd3205) from clostridium difficile 630 at 1.35 A resolution 1 N N 1 N N 2 N N 3 N N 4 N N 4 N N 4 N N 2 N N 3 N N 5 N N 6 N N 7 N N 7 N N ANALYTICAL SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS THE ASSIGNMENT OF A DIMER AS A SIGNIFICANT OLIGOMERIZATION STATE IN SOLUTION. A MSE 1 A MSE 2 HELX_P A ARG 9 A ARG 10 1 1 9 A SER 21 A SER 22 HELX_P A ASN 34 A ASN 35 1 2 14 A SER 37 A SER 38 HELX_P A ARG 41 A ARG 42 5 3 5 A GLU 53 A GLU 54 HELX_P A ASN 70 A ASN 71 1 4 18 A LEU 75 A LEU 76 HELX_P A GLN 80 A GLN 81 5 5 6 A HIS 81 A HIS 82 HELX_P A ALA 95 A ALA 96 1 6 15 A SER 114 A SER 115 HELX_P A LEU 142 A LEU 143 1 7 29 A CYS 150 A CYS 151 HELX_P A PHE 154 A PHE 155 5 8 5 A ALA 155 A ALA 156 HELX_P A ASN 164 A ASN 165 1 9 10 A GLN 189 A GLN 190 HELX_P A VAL 193 A VAL 194 1 10 5 B ILE 2 B ILE 3 HELX_P B ARG 9 B ARG 10 1 11 8 B SER 21 B SER 22 HELX_P B ASN 34 B ASN 35 1 12 14 B SER 37 B SER 38 HELX_P B ARG 41 B ARG 42 5 13 5 B THR 50 B THR 51 HELX_P B ASN 70 B ASN 71 1 14 21 B LEU 75 B LEU 76 HELX_P B GLN 80 B GLN 81 5 15 6 B HIS 81 B HIS 82 HELX_P B ALA 95 B ALA 96 1 16 15 B SER 114 B SER 115 HELX_P B LEU 142 B LEU 143 1 17 29 B CYS 150 B CYS 151 HELX_P B PHE 154 B PHE 155 5 18 5 B ALA 155 B ALA 156 HELX_P B ASN 164 B ASN 165 1 19 10 B GLN 189 B GLN 190 HELX_P B VAL 193 B VAL 194 1 20 5 covale 1.319 both A MSE 1 A C MSE 2 1_555 A ILE 2 A N ILE 3 1_555 covale 1.327 both A SER 56 A C SER 57 1_555 A MSE 57 A N MSE 58 1_555 covale 1.331 both A MSE 57 A C MSE 58 1_555 A LEU 58 A N LEU 59 1_555 covale 1.327 both A ALA 60 A C ALA 61 1_555 A MSE 61 A N MSE 62 1_555 covale 1.330 both A MSE 61 A C MSE 62 1_555 A SER 62 A N SER 63 1_555 covale 1.327 both A ILE 91 A C ILE 92 1_555 A MSE 92 A N MSE 93 1_555 covale 1.326 both A MSE 92 A C MSE 93 1_555 A LYS 93 A N LYS 94 1_555 covale 1.326 both A GLU 121 A C GLU 122 1_555 A MSE 122 A N MSE 123 1_555 covale 1.324 both A MSE 122 A C MSE 123 1_555 A ALA 123 A N ALA 124 1_555 covale 1.336 both A ASN 124 A C ASN 125 1_555 A MSE 125 A N MSE 126 1_555 covale 1.324 both A MSE 125 A C MSE 126 1_555 A GLN 126 A N GLN 127 1_555 covale 1.325 both A ASN 134 A C ASN 135 1_555 A MSE 135 A N MSE 136 1_555 covale 1.323 both A MSE 135 A C MSE 136 1_555 A SER 136 A N SER 137 1_555 covale 1.320 both B SER 56 B C SER 57 1_555 B MSE 57 B N MSE 58 1_555 covale 1.332 both B MSE 57 B C MSE 58 1_555 B LEU 58 B N LEU 59 1_555 covale 1.320 both B ALA 60 B C ALA 61 1_555 B MSE 61 B N MSE 62 1_555 covale 1.327 both B MSE 61 B C MSE 62 1_555 B SER 62 B N SER 63 1_555 covale 1.331 both B ILE 91 B C ILE 92 1_555 B MSE 92 B N MSE 93 1_555 covale 1.321 both B MSE 92 B C MSE 93 1_555 B LYS 93 B N LYS 94 1_555 covale 1.333 both B GLU 121 B C GLU 122 1_555 B MSE 122 B N MSE 123 1_555 covale 1.328 both B MSE 122 B C MSE 123 1_555 B ALA 123 B N ALA 124 1_555 covale 1.329 both B ASN 124 B C ASN 125 1_555 B MSE 125 B N MSE 126 1_555 covale 1.325 both B MSE 125 B C MSE 126 1_555 B GLN 126 B N GLN 127 1_555 covale 1.337 both B ASN 134 B C ASN 135 1_555 B MSE 135 B N MSE 136 1_555 covale 1.340 both B MSE 135 B C MSE 136 1_555 B SER 136 B N SER 137 1_555 OXIDOREDUCTASE Structural genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, oxidoreductase Q17ZU8_CLOD6 UNP 1 1 Q17ZU8 MISDSISKRRSIRKYKNQSISHETIEKIIEAGINAPSSKNRQPWRFVVITEKEKESMLKAMSKGIQNEINDNGLLPGSRQ HIAGANYTVEIMKQAPVTIFILNILGKSPLEKLSPEERFYEMANMQSIGAAIQNMSLTAVELGLGSLWICDVYFAYRELC EWLNTDSQLVAAISLGYPDEEPSRRPRLQLSDVTEWR 1 197 3GFA 1 197 Q17ZU8 A 1 2 198 1 197 3GFA 1 197 Q17ZU8 B 1 2 198 1 expression tag GLY 0 3GFA A Q17ZU8 UNP 1 2 expression tag GLY 0 3GFA B Q17ZU8 UNP 1 5 5 anti-parallel anti-parallel anti-parallel parallel parallel anti-parallel anti-parallel anti-parallel A GLY 145 A GLY 146 A ILE 149 A ILE 150 A GLN 168 A GLN 169 A GLY 176 A GLY 177 A VAL 97 A VAL 98 A ASN 103 A ASN 104 A TRP 44 A TRP 45 A ILE 49 A ILE 50 B THR 194 B THR 195 B ARG 197 B ARG 198 A THR 194 A THR 195 A ARG 197 A ARG 198 B TRP 44 B TRP 45 B ILE 49 B ILE 50 B VAL 97 B VAL 98 B ASN 103 B ASN 104 B GLN 168 B GLN 169 B GLY 176 B GLY 177 B GLY 145 B GLY 146 B ILE 149 B ILE 150 BINDING SITE FOR RESIDUE FMN A 200 A FMN 200 Software 23 BINDING SITE FOR RESIDUE CL A 198 A CL 198 Software 3 BINDING SITE FOR RESIDUE GOL A 199 A GOL 199 Software 8 BINDING SITE FOR RESIDUE GOL A 201 A GOL 201 Software 4 BINDING SITE FOR RESIDUE GOL A 202 A GOL 202 Software 9 BINDING SITE FOR RESIDUE FMN B 200 B FMN 200 Software 24 BINDING SITE FOR RESIDUE CL B 198 B CL 198 Software 3 BINDING SITE FOR RESIDUE MPD B 199 B MPD 199 Software 8 BINDING SITE FOR RESIDUE MRD B 201 B MRD 201 Software 8 A ARG 9 A ARG 10 23 1_555 A ARG 10 A ARG 11 23 1_555 A SER 11 A SER 12 23 1_555 A ARG 13 A ARG 14 23 1_555 A THR 88 A THR 89 23 1_555 A LEU 147 A LEU 148 23 1_555 A TRP 148 A TRP 149 23 1_555 A ILE 149 A ILE 150 23 1_555 A CYS 150 A CYS 151 23 1_555 A ASP 151 A ASP 152 23 1_555 A ARG 185 A ARG 186 23 1_555 A ARG 187 A ARG 188 23 1_555 A HOH 222 L HOH 23 1_555 A HOH 224 L HOH 23 1_555 A HOH 250 L HOH 23 1_555 B PRO 36 B PRO 37 23 1_555 B SER 37 B SER 38 23 1_555 B SER 38 B SER 39 23 1_555 B ASN 40 B ASN 41 23 1_555 B ALA 123 B ALA 124 23 1_555 B SER 127 B SER 128 23 1_555 B CL 198 I CL 23 1_555 B HOH 287 M HOH 23 1_555 A LYS 39 A LYS 40 3 1_555 A HOH 271 L HOH 3 1_555 B FMN 200 H FMN 3 1_555 A LEU 105 A LEU 106 8 1_555 A GLY 106 A GLY 107 8 1_555 A LYS 107 A LYS 108 8 1_555 A GLU 111 A GLU 112 8 2_656 A LYS 112 A LYS 113 8 2_656 A HOH 333 L HOH 8 2_656 A HOH 335 L HOH 8 1_555 A HOH 344 L HOH 8 1_555 A LEU 58 A LEU 59 4 1_555 A SER 62 A SER 63 4 1_555 A GLU 90 A GLU 91 4 1_555 A LYS 93 A LYS 94 4 1_555 A ARG 45 A ARG 46 9 1_555 A ILE 104 A ILE 105 9 1_555 A THR 165 A THR 166 9 1_555 A ASP 166 A ASP 167 9 1_555 A SER 167 A SER 168 9 1_555 A HOH 275 L HOH 9 1_555 A HOH 285 L HOH 9 1_555 A HOH 343 L HOH 9 1_555 B HOH 235 M HOH 9 1_555 A PRO 36 A PRO 37 24 1_555 A SER 37 A SER 38 24 1_555 A SER 38 A SER 39 24 1_555 A ASN 40 A ASN 41 24 1_555 A GLN 126 A GLN 127 24 1_555 A SER 127 A SER 128 24 1_555 A CL 198 D CL 24 1_555 B ARG 9 B ARG 10 24 1_555 B ARG 10 B ARG 11 24 1_555 B SER 11 B SER 12 24 1_555 B ARG 13 B ARG 14 24 1_555 B THR 88 B THR 89 24 1_555 B LEU 147 B LEU 148 24 1_555 B TRP 148 B TRP 149 24 1_555 B ILE 149 B ILE 150 24 1_555 B CYS 150 B CYS 151 24 1_555 B ASP 151 B ASP 152 24 1_555 B ARG 185 B ARG 186 24 1_555 B ARG 187 B ARG 188 24 1_555 B HOH 217 M HOH 24 1_555 B HOH 236 M HOH 24 1_555 B HOH 258 M HOH 24 1_555 B HOH 269 M HOH 24 1_555 B HOH 272 M HOH 24 1_555 A FMN 200 C FMN 3 1_555 B LYS 39 B LYS 40 3 1_555 B HOH 361 M HOH 3 1_555 A LEU 75 A LEU 76 8 1_555 A CYS 150 A CYS 151 8 1_555 A ASP 151 A ASP 152 8 1_555 A PHE 154 A PHE 155 8 1_555 B LYS 39 B LYS 40 8 1_555 B PHE 119 B PHE 120 8 1_555 B TYR 120 B TYR 121 8 1_555 B HOH 287 M HOH 8 1_555 A LYS 39 A LYS 40 8 1_555 A ARG 41 A ARG 42 8 1_555 A PHE 119 A PHE 120 8 1_555 A TYR 120 A TYR 121 8 1_555 B CYS 150 B CYS 151 8 1_555 B ASP 151 B ASP 152 8 1_555 B PHE 154 B PHE 155 8 1_555 B HOH 272 M HOH 8 1_555 5 C 1 2 1