0.008832
0.005099
0.000000
0.000000
0.010198
0.000000
0.000000
0.000000
0.018161
0.00000
0.00000
0.00000
Cuesta-Seijo, J.A.
Prive, G.G.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
113.228
113.228
55.064
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
Li 1
6.941
LITHIUM ION
non-polymer
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C6 H14 O2
118.174
(4S)-2-METHYL-2,4-PENTANEDIOL
non-polymer
C6 H14 O2
118.174
(4R)-2-METHYLPENTANE-2,4-DIOL
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C12 H26 O4 S
266.397
DODECYL SULFATE
non-polymer
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
S
C
N
125
N
C
N
126
N
O
N
127
N
C
Y
128
N
C
Y
129
N
N
Y
130
N
C
Y
131
N
C
Y
132
N
N
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
S
C
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
S
C
N
171
N
C
N
172
N
O
N
173
N
C
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
O
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
LI
N
192
N
N
N
193
S
C
N
194
N
C
N
195
N
O
N
196
N
C
N
197
N
C
N
198
N
C
N
199
N
C
N
200
N
N
N
201
N
O
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
N
N
218
S
C
N
219
N
C
N
220
N
O
N
221
N
C
N
222
N
C
N
223
N
S
N
224
N
C
N
225
N
O
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
C
N
238
N
C
N
239
N
O
N
240
N
C
N
241
N
C
N
242
S
C
N
243
N
O
N
244
N
C
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
C
N
260
N
C
N
261
N
O
N
262
N
C
N
263
N
C
N
264
R
C
N
265
N
O
N
266
N
C
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
N
N
282
S
C
N
283
N
C
N
284
N
O
N
285
N
C
Y
286
N
C
Y
287
N
C
Y
288
N
C
Y
289
N
C
Y
290
N
C
Y
291
N
C
N
292
N
O
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
N
C
N
309
N
C
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
S
N
322
N
O
N
323
N
O
N
324
N
O
N
325
N
O
N
326
N
C
N
327
N
C
N
328
N
C
N
329
N
C
N
330
N
C
N
331
N
C
N
332
N
C
N
333
N
C
N
334
N
C
N
335
N
C
N
336
N
C
N
337
N
C
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
N
N
365
S
C
N
366
N
C
N
367
N
O
N
368
N
C
N
369
N
O
N
370
N
O
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
S
N
379
N
O
N
380
N
O
N
381
N
O
N
382
N
O
N
383
N
N
N
384
S
C
N
385
N
C
N
386
N
O
N
387
R
C
N
388
N
O
N
389
N
C
N
390
N
O
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
N
N
401
S
C
N
402
N
C
N
403
N
O
N
404
N
C
Y
405
N
C
Y
406
N
C
Y
407
N
C
Y
408
N
N
Y
409
N
C
Y
410
N
C
Y
411
N
C
Y
412
N
C
Y
413
N
C
N
414
N
O
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
N
N
428
S
C
N
429
N
C
N
430
N
O
N
431
N
C
Y
432
N
C
Y
433
N
C
Y
434
N
C
Y
435
N
C
Y
436
N
C
Y
437
N
C
N
438
N
O
N
439
N
O
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
N
N
452
S
C
N
453
N
C
N
454
N
O
N
455
N
C
N
456
N
C
N
457
N
C
N
458
N
O
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
doub
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
Y
277
N
doub
Y
278
N
sing
Y
279
N
sing
N
280
N
sing
Y
281
N
doub
N
282
N
sing
Y
283
N
doub
N
284
N
sing
Y
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
doub
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
doub
N
307
N
sing
N
308
N
sing
N
309
N
doub
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
doub
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
doub
N
362
N
doub
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
doub
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
doub
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
Y
392
N
doub
Y
393
N
sing
Y
394
N
sing
N
395
N
sing
Y
396
N
doub
Y
397
N
sing
Y
398
N
sing
N
399
N
sing
Y
400
N
sing
Y
401
N
doub
N
402
N
sing
Y
403
N
doub
N
404
N
sing
Y
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
doub
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
Y
420
N
doub
Y
421
N
sing
Y
422
N
sing
N
423
N
sing
Y
424
N
doub
N
425
N
sing
Y
426
N
doub
N
427
N
sing
Y
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
doub
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
UK
Structure
STRUE6
2005
0969-2126
18
1210
1219
10.1016/j.str.2010.06.014
20826347
PagP crystallized from SDS/cosolvent reveals the route for phospholipid access to the hydrocarbon ruler.
2010
10.2210/pdb3gp6/pdb
pdb_00003gp6
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.0
1
CCD
2007-01-01
ADSC QUANTUM 315
SINGLE WAVELENGTH
M
x-ray
1
0.98
1.0
19-ID
APS
0.98
SYNCHROTRON
APS BEAMLINE 19-ID
19240.438
Protein pagP
1
man
polymer
266.397
DODECYL SULFATE
6
syn
non-polymer
118.174
(4S)-2-METHYL-2,4-PENTANEDIOL
9
syn
non-polymer
118.174
(4R)-2-METHYLPENTANE-2,4-DIOL
1
syn
non-polymer
96.063
SULFATE ION
6
syn
non-polymer
6.941
LITHIUM ION
2
syn
non-polymer
18.015
water
56
nat
water
Protein crcA
no
no
MNADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWN
KWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRF
QFL
MNADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWN
KWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRF
QFL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
b0622, crcA, JW0617, ybeG
83333
Escherichia coli
562
Escherichia coli
BL21(DE3)
Plasmid
pET21(a)
1
2.65
53.55
VAPOR DIFFUSION, HANGING DROP
5.6
1M MPD, 0.1M citrate pH 5.6, 1.7M lithium sulphate, 0.3M ammonium sulphate, SDS, Phase separation, VAPOR DIFFUSION, HANGING DROP, temperature 291K
291
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
1
0
2010-06-23
1
1
2011-07-13
1
2
2023-09-06
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Crystal Structure of PagP in LDAO
NMR structure
NMR structure
RCSB
Y
RCSB
2009-03-20
REL
REL
SDS
DODECYL SULFATE
MPD
(4S)-2-METHYL-2,4-PENTANEDIOL
MRD
(4R)-2-METHYLPENTANE-2,4-DIOL
SO4
SULFATE ION
LI
LITHIUM ION
HOH
water
1THQ
PDB entry 1THQ
PDB
experimental model
SDS
1
2
SDS
SDS
163
A
SDS
2
2
SDS
SDS
164
A
SDS
3
2
SDS
SDS
165
A
SDS
4
2
SDS
SDS
166
A
SDS
5
2
SDS
SDS
167
A
SDS
6
2
SDS
SDS
168
A
MPD
1
3
MPD
MPD
169
A
MPD
2
3
MPD
MPD
170
A
MPD
3
3
MPD
MPD
171
A
MPD
4
3
MPD
MPD
172
A
MPD
5
3
MPD
MPD
173
A
MPD
6
3
MPD
MPD
174
A
MPD
7
3
MPD
MPD
175
A
MPD
8
3
MPD
MPD
176
A
MPD
9
3
MPD
MPD
177
A
MPD
10
4
MRD
MRD
178
A
SO4
1
5
SO4
SO4
179
A
SO4
2
5
SO4
SO4
180
A
SO4
3
5
SO4
SO4
181
A
SO4
4
5
SO4
SO4
182
A
SO4
5
5
SO4
SO4
183
A
SO4
6
5
SO4
SO4
184
A
LI
1
6
LI
LI
185
A
LI
2
6
LI
LI
186
A
HOH
1
7
HOH
HOH
187
A
HOH
2
7
HOH
HOH
188
A
HOH
3
7
HOH
HOH
189
A
HOH
4
7
HOH
HOH
190
A
HOH
5
7
HOH
HOH
191
A
HOH
6
7
HOH
HOH
192
A
HOH
7
7
HOH
HOH
193
A
HOH
8
7
HOH
HOH
194
A
HOH
9
7
HOH
HOH
195
A
HOH
10
7
HOH
HOH
196
A
HOH
11
7
HOH
HOH
197
A
HOH
12
7
HOH
HOH
198
A
HOH
13
7
HOH
HOH
199
A
HOH
14
7
HOH
HOH
200
A
HOH
15
7
HOH
HOH
201
A
HOH
16
7
HOH
HOH
202
A
HOH
17
7
HOH
HOH
203
A
HOH
18
7
HOH
HOH
204
A
HOH
19
7
HOH
HOH
205
A
HOH
20
7
HOH
HOH
206
A
HOH
21
7
HOH
HOH
207
A
HOH
22
7
HOH
HOH
208
A
HOH
23
7
HOH
HOH
209
A
HOH
24
7
HOH
HOH
210
A
HOH
25
7
HOH
HOH
211
A
HOH
26
7
HOH
HOH
212
A
HOH
27
7
HOH
HOH
213
A
HOH
28
7
HOH
HOH
214
A
HOH
29
7
HOH
HOH
215
A
HOH
30
7
HOH
HOH
216
A
HOH
31
7
HOH
HOH
217
A
HOH
32
7
HOH
HOH
218
A
HOH
33
7
HOH
HOH
219
A
HOH
34
7
HOH
HOH
220
A
HOH
35
7
HOH
HOH
221
A
HOH
36
7
HOH
HOH
222
A
HOH
37
7
HOH
HOH
223
A
HOH
38
7
HOH
HOH
224
A
HOH
39
7
HOH
HOH
225
A
HOH
40
7
HOH
HOH
226
A
HOH
41
7
HOH
HOH
227
A
HOH
42
7
HOH
HOH
228
A
HOH
43
7
HOH
HOH
229
A
HOH
44
7
HOH
HOH
230
A
HOH
45
7
HOH
HOH
231
A
HOH
46
7
HOH
HOH
232
A
HOH
47
7
HOH
HOH
233
A
HOH
48
7
HOH
HOH
234
A
HOH
49
7
HOH
HOH
235
A
HOH
50
7
HOH
HOH
236
A
HOH
51
7
HOH
HOH
237
A
HOH
52
7
HOH
HOH
238
A
HOH
53
7
HOH
HOH
239
A
HOH
54
7
HOH
HOH
240
A
HOH
55
7
HOH
HOH
241
A
HOH
56
7
HOH
HOH
242
A
MET
0
n
1
MET
0
A
ASN
1
n
2
ASN
1
A
ALA
2
n
3
ALA
2
A
ASP
3
n
4
ASP
3
A
GLU
4
n
5
GLU
4
A
TRP
5
n
6
TRP
5
A
MET
6
n
7
MET
6
A
THR
7
n
8
THR
7
A
THR
8
n
9
THR
8
A
PHE
9
n
10
PHE
9
A
ARG
10
n
11
ARG
10
A
GLU
11
n
12
GLU
11
A
ASN
12
n
13
ASN
12
A
ILE
13
n
14
ILE
13
A
ALA
14
n
15
ALA
14
A
GLN
15
n
16
GLN
15
A
THR
16
n
17
THR
16
A
TRP
17
n
18
TRP
17
A
GLN
18
n
19
GLN
18
A
GLN
19
n
20
GLN
19
A
PRO
20
n
21
PRO
20
A
GLU
21
n
22
GLU
21
A
HIS
22
n
23
HIS
22
A
TYR
23
n
24
TYR
23
A
ASP
24
n
25
ASP
24
A
LEU
25
n
26
LEU
25
A
TYR
26
n
27
TYR
26
A
ILE
27
n
28
ILE
27
A
PRO
28
n
29
PRO
28
A
ALA
29
n
30
ALA
29
A
ILE
30
n
31
ILE
30
A
THR
31
n
32
THR
31
A
TRP
32
n
33
TRP
32
A
HIS
33
n
34
HIS
33
A
ALA
34
n
35
ALA
34
A
ARG
35
n
36
ARG
35
A
PHE
36
n
37
PHE
36
A
ALA
37
n
38
ALA
37
A
n
39
38
A
n
40
39
A
n
41
40
A
n
42
41
A
n
43
42
A
n
44
43
A
n
45
44
A
n
46
45
A
TYR
46
n
47
TYR
46
A
ASN
47
n
48
ASN
47
A
GLU
48
n
49
GLU
48
A
ARG
49
n
50
ARG
49
A
PRO
50
n
51
PRO
50
A
TRP
51
n
52
TRP
51
A
GLY
52
n
53
GLY
52
A
GLY
53
n
54
GLY
53
A
GLY
54
n
55
GLY
54
A
PHE
55
n
56
PHE
55
A
GLY
56
n
57
GLY
56
A
LEU
57
n
58
LEU
57
A
SER
58
n
59
SER
58
A
ARG
59
n
60
ARG
59
A
TRP
60
n
61
TRP
60
A
ASP
61
n
62
ASP
61
A
GLU
62
n
63
GLU
62
A
LYS
63
n
64
LYS
63
A
GLY
64
n
65
GLY
64
A
ASN
65
n
66
ASN
65
A
TRP
66
n
67
TRP
66
A
HIS
67
n
68
HIS
67
A
GLY
68
n
69
GLY
68
A
LEU
69
n
70
LEU
69
A
TYR
70
n
71
TYR
70
A
ALA
71
n
72
ALA
71
A
MET
72
n
73
MET
72
A
ALA
73
n
74
ALA
73
A
PHE
74
n
75
PHE
74
A
LYS
75
n
76
LYS
75
A
ASP
76
n
77
ASP
76
A
SER
77
n
78
SER
77
A
TRP
78
n
79
TRP
78
A
ASN
79
n
80
ASN
79
A
LYS
80
n
81
LYS
80
A
TRP
81
n
82
TRP
81
A
GLU
82
n
83
GLU
82
A
PRO
83
n
84
PRO
83
A
ILE
84
n
85
ILE
84
A
ALA
85
n
86
ALA
85
A
GLY
86
n
87
GLY
86
A
TYR
87
n
88
TYR
87
A
GLY
88
n
89
GLY
88
A
TRP
89
n
90
TRP
89
A
GLU
90
n
91
GLU
90
A
SER
91
n
92
SER
91
A
THR
92
n
93
THR
92
A
TRP
93
n
94
TRP
93
A
ARG
94
n
95
ARG
94
A
PRO
95
n
96
PRO
95
A
LEU
96
n
97
LEU
96
A
ALA
97
n
98
ALA
97
A
ASP
98
n
99
ASP
98
A
GLU
99
n
100
GLU
99
A
ASN
100
n
101
ASN
100
A
PHE
101
n
102
PHE
101
A
HIS
102
n
103
HIS
102
A
LEU
103
n
104
LEU
103
A
GLY
104
n
105
GLY
104
A
LEU
105
n
106
LEU
105
A
GLY
106
n
107
GLY
106
A
PHE
107
n
108
PHE
107
A
THR
108
n
109
THR
108
A
ALA
109
n
110
ALA
109
A
GLY
110
n
111
GLY
110
A
VAL
111
n
112
VAL
111
A
THR
112
n
113
THR
112
A
ALA
113
n
114
ALA
113
A
ARG
114
n
115
ARG
114
A
ASP
115
n
116
ASP
115
A
ASN
116
n
117
ASN
116
A
TRP
117
n
118
TRP
117
A
ASN
118
n
119
ASN
118
A
TYR
119
n
120
TYR
119
A
ILE
120
n
121
ILE
120
A
PRO
121
n
122
PRO
121
A
LEU
122
n
123
LEU
122
A
PRO
123
n
124
PRO
123
A
VAL
124
n
125
VAL
124
A
LEU
125
n
126
LEU
125
A
LEU
126
n
127
LEU
126
A
PRO
127
n
128
PRO
127
A
LEU
128
n
129
LEU
128
A
ALA
129
n
130
ALA
129
A
SER
130
n
131
SER
130
A
VAL
131
n
132
VAL
131
A
GLY
132
n
133
GLY
132
A
TYR
133
n
134
TYR
133
A
GLY
134
n
135
GLY
134
A
PRO
135
n
136
PRO
135
A
VAL
136
n
137
VAL
136
A
THR
137
n
138
THR
137
A
PHE
138
n
139
PHE
138
A
GLN
139
n
140
GLN
139
A
MET
140
n
141
MET
140
A
THR
141
n
142
THR
141
A
TYR
142
n
143
TYR
142
A
ILE
143
n
144
ILE
143
A
PRO
144
n
145
PRO
144
A
GLY
145
n
146
GLY
145
A
THR
146
n
147
THR
146
A
TYR
147
n
148
TYR
147
A
ASN
148
n
149
ASN
148
A
ASN
149
n
150
ASN
149
A
GLY
150
n
151
GLY
150
A
ASN
151
n
152
ASN
151
A
VAL
152
n
153
VAL
152
A
TYR
153
n
154
TYR
153
A
PHE
154
n
155
PHE
154
A
ALA
155
n
156
ALA
155
A
TRP
156
n
157
TRP
156
A
MET
157
n
158
MET
157
A
ARG
158
n
159
ARG
158
A
PHE
159
n
160
PHE
159
A
GLN
160
n
161
GLN
160
A
PHE
161
n
162
PHE
161
A
LEU
162
n
163
LEU
162
A
author_defined_assembly
1
monomeric
A
GLU
21
A
O
GLU
22
1_555
A
LI
185
X
LI
LI
1_555
A
LEU
162
A
OXT
LEU
163
1_555
122.0
A
GLU
21
A
O
GLU
22
1_555
A
LI
185
X
LI
LI
1_555
A
MPD
171
J
O4
MPD
1_555
100.5
A
LEU
162
A
OXT
LEU
163
1_555
A
LI
185
X
LI
LI
1_555
A
MPD
171
J
O4
MPD
1_555
101.6
A
HOH
201
Z
O
HOH
1_555
A
LI
186
Y
LI
LI
1_555
A
HOH
215
Z
O
HOH
1_555
106.2
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
TYR
26
A
N
TYR
27
A
O
GLY
54
A
O
GLY
55
A
N
LEU
57
A
N
LEU
58
A
O
LEU
69
A
O
LEU
70
A
N
MET
72
A
N
MET
73
A
O
ILE
84
A
O
ILE
85
A
N
TYR
87
A
N
TYR
88
A
O
ALA
109
A
O
ALA
110
A
N
THR
112
A
N
THR
113
A
O
LEU
122
A
O
LEU
123
A
N
VAL
131
A
N
VAL
132
A
O
PHE
138
A
O
PHE
139
A
N
ILE
143
A
N
ILE
144
A
O
VAL
152
A
O
VAL
153
A
O
PHE
161
A
O
PHE
162
A
N
TYR
23
A
N
TYR
24
1
A
CG
GLU
4
A
CG
GLU
5
1
Y
1
A
CD
GLU
4
A
CD
GLU
5
1
Y
1
A
OE1
GLU
4
A
OE1
GLU
5
1
Y
1
A
OE2
GLU
4
A
OE2
GLU
5
1
Y
1
A
CD
GLU
11
A
A
CD
GLU
12
0
Y
1
A
OE1
GLU
11
A
A
OE1
GLU
12
0
Y
1
A
OE2
GLU
11
A
A
OE2
GLU
12
0
Y
1
A
CG
ARG
35
A
CG
ARG
36
1
Y
1
A
CD
ARG
35
A
CD
ARG
36
1
Y
1
A
NE
ARG
35
A
NE
ARG
36
1
Y
1
A
CZ
ARG
35
A
CZ
ARG
36
1
Y
1
A
NH1
ARG
35
A
NH1
ARG
36
1
Y
1
A
NH2
ARG
35
A
NH2
ARG
36
1
Y
1
A
CG
PHE
36
A
CG
PHE
37
1
Y
1
A
CD1
PHE
36
A
CD1
PHE
37
1
Y
1
A
CD2
PHE
36
A
CD2
PHE
37
1
Y
1
A
CE1
PHE
36
A
CE1
PHE
37
1
Y
1
A
CE2
PHE
36
A
CE2
PHE
37
1
Y
1
A
CZ
PHE
36
A
CZ
PHE
37
1
Y
1
A
CG
TYR
46
A
CG
TYR
47
1
Y
1
A
CD1
TYR
46
A
CD1
TYR
47
1
Y
1
A
CD2
TYR
46
A
CD2
TYR
47
1
Y
1
A
CE1
TYR
46
A
CE1
TYR
47
1
Y
1
A
CE2
TYR
46
A
CE2
TYR
47
1
Y
1
A
CZ
TYR
46
A
CZ
TYR
47
1
Y
1
A
OH
TYR
46
A
OH
TYR
47
1
Y
1
A
CG
ASN
47
A
CG
ASN
48
1
Y
1
A
OD1
ASN
47
A
OD1
ASN
48
1
Y
1
A
ND2
ASN
47
A
ND2
ASN
48
1
Y
1
A
OG1
THR
146
A
OG1
THR
147
1
Y
1
A
CG2
THR
146
A
CG2
THR
147
1
Y
1
A
CG
TYR
147
A
CG
TYR
148
1
Y
1
A
CD1
TYR
147
A
CD1
TYR
148
1
Y
1
A
CD2
TYR
147
A
CD2
TYR
148
1
Y
1
A
CE1
TYR
147
A
CE1
TYR
148
1
Y
1
A
CE2
TYR
147
A
CE2
TYR
148
1
Y
1
A
CZ
TYR
147
A
CZ
TYR
148
1
Y
1
A
OH
TYR
147
A
OH
TYR
148
1
Y
1
A
CG
ASN
148
A
CG
ASN
149
1
Y
1
A
OD1
ASN
148
A
OD1
ASN
149
1
Y
1
A
ND2
ASN
148
A
ND2
ASN
149
1
Y
1
A
S
SDS
168
G
S
SDS
1
1
N
1
A
O1S
SDS
168
G
O1S
SDS
1
1
N
1
A
O2S
SDS
168
G
O2S
SDS
1
1
N
1
A
O3S
SDS
168
G
O3S
SDS
1
1
N
1
A
O4
SDS
168
G
O4
SDS
1
1
N
1
A
TYR
38
A
TYR
39
1
Y
1
A
ASP
39
A
ASP
40
1
Y
1
A
LYS
40
A
LYS
41
1
Y
1
A
GLU
41
A
GLU
42
1
Y
1
A
LYS
42
A
LYS
43
1
Y
1
A
THR
43
A
THR
44
1
Y
1
A
ASP
44
A
ASP
45
1
Y
1
A
ARG
45
A
ARG
46
1
Y
1
A
A
OE2
LI
GLU
LI
21
186
1.63
1
A
A
OE2
O
GLU
HOH
62
218
2.02
1
A
A
O
O
HOH
HOH
226
235
2.18
1
A
A
O
LI
PRO
LI
20
185
1.91
1_555
11_557
1
A
A
O2
LI
MPD
LI
171
185
2.14
1_555
11_557
1
A
ASN
47
-172.45
24.80
1
A
TYR
147
93.98
103.60
1
A
ASN
148
59.62
-32.99
28.065
3.20
1.60
0.00
3.20
0.00
-4.80
0.970
0.959
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. The author states that the crystallization conditions included large amounts of lithium, but it cannot be confirmed that the ion is lithium based on electron density.
0.20817
0.17147
0.17259
0.17259
1.40
20.00
1260
39132
39132
3.1
97.74
3.009
0.050
RANDOM
1
anisotropic
THROUGHOUT
-3.0
-3.0
MOLECULAR REPLACEMENT
0.062
0.060
0.80
0.80
1.20
PDB entry 1THQ
Refmac 5
BABINET MODEL WITH MASK
0.202
1.40
20.00
56
1523
209
0
1258
0.021
0.021
1567
0.002
0.020
1452
2.119
2.017
2146
0.960
3.000
3338
7.084
5.000
173
32.108
22.899
69
13.991
15.000
191
18.014
15.000
8
0.137
0.200
187
0.012
0.020
1592
0.001
0.020
332
0.236
0.200
246
0.193
0.200
1358
0.199
0.200
682
0.092
0.200
911
0.244
0.200
60
0.042
0.200
1
0.217
0.200
4
0.183
0.200
10
0.242
0.200
88
0.222
0.200
6
0.105
0.200
1
2.793
1.500
830
1.726
1.500
329
3.806
2.000
1295
4.125
3.000
882
5.134
4.500
841
2.612
3.000
3632
15.265
3.000
58
9.638
3.000
2977
0.290
0.303
1.436
91
2364
20
82.24
21.8
1.40
20.0
3GP6
40433
40433
-3.0
-3.0
0.068
1
8.2
97.7
1.40
1.42
1.36
1633
0.531
4.1
80.4
data collection
HKL-3000
phasing
EPMR
refinement
REFMAC
5.2.0005
data reduction
HKL-3000
data scaling
SCALEPACK
Crystal structure of PagP in SDS/MPD
1
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
4
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
6
N
N
6
N
N
7
N
N
A
ASN
1
A
ASN
2
HELX_P
A
GLN
19
A
GLN
20
1
1
19
A
ASP
115
A
ASP
116
HELX_P
A
ASN
118
A
ASN
119
5
2
4
metalc
1.926
A
GLU
21
A
O
GLU
22
1_555
A
LI
185
X
LI
LI
1_555
metalc
1.809
A
LEU
162
A
OXT
LEU
163
1_555
A
LI
185
X
LI
LI
1_555
metalc
2.003
A
MPD
171
J
O4
MPD
1_555
A
LI
185
X
LI
LI
1_555
metalc
2.543
A
LI
186
Y
LI
LI
1_555
A
HOH
201
Z
O
HOH
1_555
metalc
2.313
A
LI
186
Y
LI
LI
1_555
A
HOH
215
Z
O
HOH
1_555
TRANSFERASE
PALMITOYLTRANSFERASE, BETA-BARREL, OUTER MEMBRANE ENZYME, PagP, SDS, MPD, TRANSFERASE
CRCA_ECOLI
UNP
1
26
P37001
NADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNK
WEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQ
F
26
186
3GP6
1
161
P37001
A
1
2
162
1
initiating methionine
MET
0
3GP6
A
P37001
UNP
1
1
expression tag
LEU
162
3GP6
A
P37001
UNP
163
9
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
HIS
22
A
HIS
23
A
HIS
33
A
HIS
34
A
GLY
52
A
GLY
53
A
TRP
60
A
TRP
61
A
TRP
66
A
TRP
67
A
LYS
75
A
LYS
76
A
TRP
81
A
TRP
82
A
TRP
93
A
TRP
94
A
PHE
101
A
PHE
102
A
ALA
113
A
ALA
114
A
PRO
121
A
PRO
122
A
TYR
133
A
TYR
134
A
VAL
136
A
VAL
137
A
ILE
143
A
ILE
144
A
VAL
152
A
VAL
153
A
PHE
161
A
PHE
162
A
HIS
22
A
HIS
23
A
HIS
33
A
HIS
34
BINDING SITE FOR RESIDUE SDS A 163
A
SDS
163
Software
5
BINDING SITE FOR RESIDUE SDS A 164
A
SDS
164
Software
7
BINDING SITE FOR RESIDUE SDS A 165
A
SDS
165
Software
4
BINDING SITE FOR RESIDUE SDS A 166
A
SDS
166
Software
9
BINDING SITE FOR RESIDUE SDS A 167
A
SDS
167
Software
4
BINDING SITE FOR RESIDUE SDS A 168
A
SDS
168
Software
4
BINDING SITE FOR RESIDUE MPD A 169
A
MPD
169
Software
6
BINDING SITE FOR RESIDUE MPD A 170
A
MPD
170
Software
5
BINDING SITE FOR RESIDUE MPD A 171
A
MPD
171
Software
10
BINDING SITE FOR RESIDUE MPD A 172
A
MPD
172
Software
4
BINDING SITE FOR RESIDUE MPD A 173
A
MPD
173
Software
5
BINDING SITE FOR RESIDUE MPD A 174
A
MPD
174
Software
6
BINDING SITE FOR RESIDUE MPD A 175
A
MPD
175
Software
4
BINDING SITE FOR RESIDUE MPD A 176
A
MPD
176
Software
3
BINDING SITE FOR RESIDUE MPD A 177
A
MPD
177
Software
4
BINDING SITE FOR RESIDUE MRD A 178
A
MRD
178
Software
5
BINDING SITE FOR RESIDUE SO4 A 179
A
SO4
179
Software
5
BINDING SITE FOR RESIDUE SO4 A 180
A
SO4
180
Software
5
BINDING SITE FOR RESIDUE SO4 A 181
A
SO4
181
Software
1
BINDING SITE FOR RESIDUE SO4 A 182
A
SO4
182
Software
3
BINDING SITE FOR RESIDUE SO4 A 183
A
SO4
183
Software
5
BINDING SITE FOR RESIDUE SO4 A 184
A
SO4
184
Software
3
BINDING SITE FOR RESIDUE LI A 185
A
LI
185
Software
7
BINDING SITE FOR RESIDUE LI A 186
A
LI
186
Software
5
A
ARG
10
A
ARG
11
5
11_556
A
TYR
70
A
TYR
71
5
1_555
A
ILE
84
A
ILE
85
5
1_555
A
ARG
114
A
ARG
115
5
1_555
A
TRP
156
A
TRP
157
5
1_555
A
ALA
14
A
ALA
15
7
1_555
A
TRP
17
A
TRP
18
7
1_555
A
GLN
18
A
GLN
19
7
1_555
A
PHE
55
A
PHE
56
7
1_555
A
TYR
70
A
TYR
71
7
1_555
A
MPD
174
M
MPD
7
11_556
A
MPD
177
P
MPD
7
1_555
A
TRP
93
A
TRP
94
4
1_555
A
PRO
95
A
PRO
96
4
1_555
A
LEU
105
A
LEU
106
4
1_555
A
SER
130
A
SER
131
4
1_555
A
ILE
30
A
ILE
31
9
7_556
A
PHE
36
A
PHE
37
9
7_556
A
TYR
46
A
TYR
47
9
7_556
A
PHE
101
A
PHE
102
9
1_555
A
VAL
131
A
VAL
132
9
1_555
A
GLY
132
A
GLY
133
9
1_555
A
TYR
133
A
TYR
134
9
1_555
A
PRO
135
A
PRO
136
9
1_555
A
PHE
138
A
PHE
139
9
7_556
A
TRP
51
A
TRP
52
4
1_555
A
LYS
75
A
LYS
76
4
1_555
A
TRP
81
A
TRP
82
4
1_555
A
SO4
180
S
SO4
4
1_555
A
SER
91
A
SER
92
4
1_555
A
LEU
105
A
LEU
106
4
1_555
A
GLY
106
A
GLY
107
4
1_555
A
SO4
179
R
SO4
4
1_555
A
LEU
105
A
LEU
106
6
7_556
A
PRO
127
A
PRO
128
6
7_556
A
LEU
128
A
LEU
129
6
7_556
A
SO4
183
V
SO4
6
7_556
A
HOH
205
Z
HOH
6
1_555
A
HOH
231
Z
HOH
6
1_555
A
ALA
109
A
ALA
110
5
1_555
A
PRO
121
A
PRO
122
5
11_556
A
LEU
122
A
LEU
123
5
11_556
A
PRO
123
A
PRO
124
5
11_556
A
MPD
174
M
MPD
5
11_556
A
PRO
20
A
PRO
21
10
1_555
A
PRO
20
A
PRO
21
10
11_557
A
GLU
21
A
GLU
22
10
11_557
A
GLU
21
A
GLU
22
10
1_555
A
HIS
22
A
HIS
23
10
1_555
A
LEU
162
A
LEU
163
10
11_557
A
LEU
162
A
LEU
163
10
1_555
A
SO4
184
W
SO4
10
1_555
A
LI
185
X
LI
10
1_555
A
LI
185
X
LI
10
11_557
A
TRP
5
A
TRP
6
4
11_556
A
PHE
9
A
PHE
10
4
11_556
A
HOH
232
Z
HOH
4
11_556
A
HOH
232
Z
HOH
4
1_555
A
GLY
53
A
GLY
54
5
1_555
A
ALA
71
A
ALA
72
5
1_555
A
MET
72
A
MET
73
5
1_555
A
SO4
180
S
SO4
5
1_555
A
HOH
239
Z
HOH
5
1_555
A
ARG
10
A
ARG
11
6
11_556
A
ILE
13
A
ILE
14
6
11_556
A
TRP
117
A
TRP
118
6
1_555
A
LEU
122
A
LEU
123
6
1_555
A
SDS
164
C
SDS
6
11_556
A
MPD
170
I
MPD
6
11_556
A
ASP
3
A
ASP
4
4
5_555
A
ALA
97
A
ALA
98
4
1_555
A
ASP
98
A
ASP
99
4
1_555
A
TYR
142
A
TYR
143
4
7_556
A
ALA
113
A
ALA
114
3
1_555
A
PRO
121
A
PRO
122
3
11_556
A
PRO
121
A
PRO
122
3
1_555
A
ASN
116
A
ASN
117
4
11_556
A
TRP
117
A
TRP
118
4
11_556
A
ASN
118
A
ASN
119
4
11_556
A
SDS
164
C
SDS
4
1_555
A
PHE
9
A
PHE
10
5
1_555
A
ASN
12
A
ASN
13
5
1_555
A
TYR
87
A
TYR
88
5
1_555
A
TRP
89
A
TRP
90
5
1_555
A
PHE
107
A
PHE
108
5
1_555
A
PHE
107
A
PHE
108
5
1_555
A
LEU
125
A
LEU
126
5
1_555
A
LEU
126
A
LEU
127
5
1_555
A
SDS
168
G
SDS
5
1_555
A
SO4
183
V
SO4
5
1_555
A
GLY
53
A
GLY
54
5
1_555
A
ALA
73
A
ALA
74
5
1_555
A
TRP
81
A
TRP
82
5
1_555
A
SDS
167
F
SDS
5
1_555
A
MPD
173
L
MPD
5
1_555
A
HOH
233
Z
HOH
1
1_555
A
TRP
17
A
TRP
18
3
1_555
A
LEU
162
A
LEU
163
3
11_557
A
SO4
184
W
SO4
3
1_555
A
ALA
2
A
ALA
3
5
11_556
A
PRO
127
A
PRO
128
5
1_555
A
TYR
142
A
TYR
143
5
1_555
A
MPD
169
H
MPD
5
7_556
A
SO4
179
R
SO4
5
1_555
A
TYR
23
A
TYR
24
3
1_555
A
MPD
171
J
MPD
3
1_555
A
SO4
182
U
SO4
3
1_555
A
PRO
20
A
PRO
21
7
11_557
A
GLU
21
A
GLU
22
7
11_557
A
GLU
21
A
GLU
22
7
1_555
A
HIS
22
A
HIS
23
7
1_555
A
LEU
162
A
LEU
163
7
1_555
A
MPD
171
J
MPD
7
1_555
A
MPD
171
J
MPD
7
11_557
A
GLU
21
A
GLU
22
5
1_555
A
HIS
22
A
HIS
23
5
11_557
A
HOH
200
Z
HOH
5
1_555
A
HOH
201
Z
HOH
5
1_555
A
HOH
215
Z
HOH
5
1_555
180
P 62 2 2