0.013254
0.000000
0.002805
0.000000
0.012977
0.000000
0.000000
0.000000
0.011719
0.00000
0.00000
0.00000
Gras, S.
Saulquin, X.
Reiser, J.-B.
Debeaupuis, E.
Echasserieau, K.
Kissenpfennig, A.
Legoux, F.
Chouquet, A.
Le Gorrec, M.
Machillot, P.
Neveu, B.
Thielens, N.
Malissen, B.
Bonneville, M.
Housset, D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.00
101.95
90.00
75.450
77.060
87.220
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cl -1
35.453
CHLORIDE ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
J.Immunol.
JOIMA3
0952
0022-1767
183
430
437
10.4049/jimmunol.0900556
19542454
Structural bases for the affinity-driven selection of a public TCR against a dominant human cytomegalovirus epitope.
2009
10.2210/pdb3gsn/pdb
pdb_00003gsn
100
1
CCD
2006-11-22
ADSC QUANTUM 315r
SINGLE WAVELENGTH
M
x-ray
1
0.976
1.0
ID29
ESRF
0.976
SYNCHROTRON
ESRF BEAMLINE ID29
31753.139
HLA class I histocompatibility antigen, A-2 alpha chain
A245V
1
man
polymer
943.161
HCMV pp65 fragment 495-503 (NLVPMVATV)
1
syn
polymer
11879.356
Beta-2-microglobulin
1
man
polymer
22266.400
RA14 TCR alpha chain (TRAV24, TRAJ49)
1
man
polymer
27122.217
RA14 TCR beta chain (TRBV6-5, TRBD1, TRBJ1-2)
1
man
polymer
96.063
SULFATE ION
1
syn
non-polymer
35.453
CHLORIDE ION
1
syn
non-polymer
18.015
water
24
nat
water
MHC class I antigen A*2
Beta-2-microglobulin form pI 5.3
no
no
GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGT
LRGYYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYL
EGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGT
FQKWVAVVVPSGQEQRYTCHVQHEGLPKPLTLRW
GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGT
LRGYYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYL
EGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGT
FQKWVAVVVPSGQEQRYTCHVQHEGLPKPLTLRW
H
polypeptide(L)
no
no
NLVPMVATV
NLVPMVATV
P
polypeptide(L)
no
no
MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYA
CRVNHVTLSQPKIVKWDRDM
MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYA
CRVNHVTLSQPKIVKWDRDM
L
polypeptide(L)
no
no
LNVEQSPQSLHVQEGDSTNFTCSFPSSNFYALHWYRWETAKSPEALFVMTLNGDEKKKGRISATLNTKEGYSYLYIKGSQ
PEDSATYLCARNTGNQFYFGTGTSLTVIPNIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDAYITDKTVLD
MRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFFPS
LNVEQSPQSLHVQEGDSTNFTCSFPSSNFYALHWYRWETAKSPEALFVMTLNGDEKKKGRISATLNTKEGYSYLYIKGSQ
PEDSATYLCARNTGNQFYFGTGTSLTVIPNIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDAYITDKTVLD
MRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFFPS
A
polypeptide(L)
no
no
MGVTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSVGAGITDQGEVPNGYNVSRSTTEDFPLRLLSA
APSQTSVYFCASSPVTGGIYGYTFGSGTRLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWV
NGKEVHSGVSTDPQPLKEQPALNDSRYCLSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWG
RAD
MGVTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSVGAGITDQGEVPNGYNVSRSTTEDFPLRLLSA
APSQTSVYFCASSPVTGGIYGYTFGSGTRLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWV
NGKEVHSGVSTDPQPLKEQPALNDSRYCLSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWG
RAD
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
HLA, HLA-A, HLAA
9606
Homo sapiens
562
Escherichia coli
X90F LaqQ1
plasmid
pHN1
human
sample
B2M, Beta-2 microglubulin, CDABP0092, HDCMA22P
9606
Homo sapiens
562
Escherichia coli
X90F LaqQ1
plasmid
pHN1
human
sample
TCR
9606
Homo sapiens
562
Escherichia coli
BL21(DE3)RIL
plasmid
pLM1
human
sample
TCR
9606
Homo sapiens
562
Escherichia coli
BL21(DE3)RIL
plasmid
pET22b
1
2.62
53.14
VAPOR DIFFUSION, HANGING DROP
18-24% PEG 3350, 0.3M LiSO4, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
database_2
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Database references
Derived calculations
1
0
2009-08-04
1
1
2011-07-13
1
2
2021-10-20
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2009-03-27
REL
REL
SO4
SULFATE ION
CL
CHLORIDE ION
HOH
water
SO4
800
6
SO4
SO4
800
L
CL
1
7
CL
CL
1
A
HOH
2
8
HOH
HOH
275
H
HOH
8
8
HOH
HOH
276
H
HOH
10
8
HOH
HOH
277
H
HOH
18
8
HOH
HOH
278
H
HOH
20
8
HOH
HOH
279
H
HOH
4
8
HOH
HOH
100
L
HOH
5
8
HOH
HOH
101
L
HOH
7
8
HOH
HOH
102
L
HOH
16
8
HOH
HOH
103
L
HOH
17
8
HOH
HOH
104
L
HOH
23
8
HOH
HOH
105
L
HOH
6
8
HOH
HOH
201
A
HOH
15
8
HOH
HOH
202
A
HOH
21
8
HOH
HOH
203
A
HOH
24
8
HOH
HOH
204
A
HOH
3
8
HOH
HOH
245
B
HOH
9
8
HOH
HOH
246
B
HOH
11
8
HOH
HOH
247
B
HOH
12
8
HOH
HOH
248
B
HOH
13
8
HOH
HOH
249
B
HOH
14
8
HOH
HOH
250
B
HOH
19
8
HOH
HOH
251
B
HOH
22
8
HOH
HOH
252
B
HOH
25
8
HOH
HOH
253
B
GLY
1
n
1
GLY
1
H
SER
2
n
2
SER
2
H
HIS
3
n
3
HIS
3
H
SER
4
n
4
SER
4
H
MET
5
n
5
MET
5
H
ARG
6
n
6
ARG
6
H
TYR
7
n
7
TYR
7
H
PHE
8
n
8
PHE
8
H
PHE
9
n
9
PHE
9
H
THR
10
n
10
THR
10
H
SER
11
n
11
SER
11
H
VAL
12
n
12
VAL
12
H
SER
13
n
13
SER
13
H
ARG
14
n
14
ARG
14
H
PRO
15
n
15
PRO
15
H
GLY
16
n
16
GLY
16
H
ARG
17
n
17
ARG
17
H
GLY
18
n
18
GLY
18
H
GLU
19
n
19
GLU
19
H
PRO
20
n
20
PRO
20
H
ARG
21
n
21
ARG
21
H
PHE
22
n
22
PHE
22
H
ILE
23
n
23
ILE
23
H
ALA
24
n
24
ALA
24
H
VAL
25
n
25
VAL
25
H
GLY
26
n
26
GLY
26
H
TYR
27
n
27
TYR
27
H
VAL
28
n
28
VAL
28
H
ASP
29
n
29
ASP
29
H
ASP
30
n
30
ASP
30
H
THR
31
n
31
THR
31
H
GLN
32
n
32
GLN
32
H
PHE
33
n
33
PHE
33
H
VAL
34
n
34
VAL
34
H
ARG
35
n
35
ARG
35
H
PHE
36
n
36
PHE
36
H
ASP
37
n
37
ASP
37
H
SER
38
n
38
SER
38
H
ASP
39
n
39
ASP
39
H
ALA
40
n
40
ALA
40
H
ALA
41
n
41
ALA
41
H
SER
42
n
42
SER
42
H
GLN
43
n
43
GLN
43
H
ARG
44
n
44
ARG
44
H
MET
45
n
45
MET
45
H
GLU
46
n
46
GLU
46
H
PRO
47
n
47
PRO
47
H
ARG
48
n
48
ARG
48
H
ALA
49
n
49
ALA
49
H
PRO
50
n
50
PRO
50
H
TRP
51
n
51
TRP
51
H
ILE
52
n
52
ILE
52
H
GLU
53
n
53
GLU
53
H
GLN
54
n
54
GLN
54
H
GLU
55
n
55
GLU
55
H
GLY
56
n
56
GLY
56
H
PRO
57
n
57
PRO
57
H
GLU
58
n
58
GLU
58
H
TYR
59
n
59
TYR
59
H
TRP
60
n
60
TRP
60
H
ASP
61
n
61
ASP
61
H
GLY
62
n
62
GLY
62
H
GLU
63
n
63
GLU
63
H
THR
64
n
64
THR
64
H
ARG
65
n
65
ARG
65
H
LYS
66
n
66
LYS
66
H
VAL
67
n
67
VAL
67
H
LYS
68
n
68
LYS
68
H
ALA
69
n
69
ALA
69
H
HIS
70
n
70
HIS
70
H
SER
71
n
71
SER
71
H
GLN
72
n
72
GLN
72
H
THR
73
n
73
THR
73
H
HIS
74
n
74
HIS
74
H
ARG
75
n
75
ARG
75
H
VAL
76
n
76
VAL
76
H
ASP
77
n
77
ASP
77
H
LEU
78
n
78
LEU
78
H
GLY
79
n
79
GLY
79
H
THR
80
n
80
THR
80
H
LEU
81
n
81
LEU
81
H
ARG
82
n
82
ARG
82
H
GLY
83
n
83
GLY
83
H
TYR
84
n
84
TYR
84
H
TYR
85
n
85
TYR
85
H
ASN
86
n
86
ASN
86
H
GLN
87
n
87
GLN
87
H
SER
88
n
88
SER
88
H
GLU
89
n
89
GLU
89
H
ALA
90
n
90
ALA
90
H
GLY
91
n
91
GLY
91
H
SER
92
n
92
SER
92
H
HIS
93
n
93
HIS
93
H
THR
94
n
94
THR
94
H
VAL
95
n
95
VAL
95
H
GLN
96
n
96
GLN
96
H
ARG
97
n
97
ARG
97
H
MET
98
n
98
MET
98
H
TYR
99
n
99
TYR
99
H
GLY
100
n
100
GLY
100
H
CYS
101
n
101
CYS
101
H
ASP
102
n
102
ASP
102
H
VAL
103
n
103
VAL
103
H
GLY
104
n
104
GLY
104
H
SER
105
n
105
SER
105
H
ASP
106
n
106
ASP
106
H
TRP
107
n
107
TRP
107
H
ARG
108
n
108
ARG
108
H
PHE
109
n
109
PHE
109
H
LEU
110
n
110
LEU
110
H
ARG
111
n
111
ARG
111
H
GLY
112
n
112
GLY
112
H
TYR
113
n
113
TYR
113
H
HIS
114
n
114
HIS
114
H
GLN
115
n
115
GLN
115
H
TYR
116
n
116
TYR
116
H
ALA
117
n
117
ALA
117
H
TYR
118
n
118
TYR
118
H
ASP
119
n
119
ASP
119
H
GLY
120
n
120
GLY
120
H
LYS
121
n
121
LYS
121
H
ASP
122
n
122
ASP
122
H
TYR
123
n
123
TYR
123
H
ILE
124
n
124
ILE
124
H
ALA
125
n
125
ALA
125
H
LEU
126
n
126
LEU
126
H
LYS
127
n
127
LYS
127
H
GLU
128
n
128
GLU
128
H
ASP
129
n
129
ASP
129
H
LEU
130
n
130
LEU
130
H
ARG
131
n
131
ARG
131
H
SER
132
n
132
SER
132
H
TRP
133
n
133
TRP
133
H
THR
134
n
134
THR
134
H
ALA
135
n
135
ALA
135
H
ALA
136
n
136
ALA
136
H
ASP
137
n
137
ASP
137
H
MET
138
n
138
MET
138
H
ALA
139
n
139
ALA
139
H
ALA
140
n
140
ALA
140
H
GLN
141
n
141
GLN
141
H
THR
142
n
142
THR
142
H
THR
143
n
143
THR
143
H
LYS
144
n
144
LYS
144
H
HIS
145
n
145
HIS
145
H
LYS
146
n
146
LYS
146
H
TRP
147
n
147
TRP
147
H
GLU
148
n
148
GLU
148
H
ALA
149
n
149
ALA
149
H
ALA
150
n
150
ALA
150
H
HIS
151
n
151
HIS
151
H
VAL
152
n
152
VAL
152
H
ALA
153
n
153
ALA
153
H
GLU
154
n
154
GLU
154
H
GLN
155
n
155
GLN
155
H
LEU
156
n
156
LEU
156
H
ARG
157
n
157
ARG
157
H
ALA
158
n
158
ALA
158
H
TYR
159
n
159
TYR
159
H
LEU
160
n
160
LEU
160
H
GLU
161
n
161
GLU
161
H
GLY
162
n
162
GLY
162
H
THR
163
n
163
THR
163
H
CYS
164
n
164
CYS
164
H
VAL
165
n
165
VAL
165
H
GLU
166
n
166
GLU
166
H
TRP
167
n
167
TRP
167
H
LEU
168
n
168
LEU
168
H
ARG
169
n
169
ARG
169
H
ARG
170
n
170
ARG
170
H
TYR
171
n
171
TYR
171
H
LEU
172
n
172
LEU
172
H
GLU
173
n
173
GLU
173
H
ASN
174
n
174
ASN
174
H
GLY
175
n
175
GLY
175
H
LYS
176
n
176
LYS
176
H
GLU
177
n
177
GLU
177
H
THR
178
n
178
THR
178
H
LEU
179
n
179
LEU
179
H
GLN
180
n
180
GLN
180
H
ARG
181
n
181
ARG
181
H
THR
182
n
182
THR
182
H
ASP
183
n
183
ASP
183
H
ALA
184
n
184
ALA
184
H
PRO
185
n
185
PRO
185
H
LYS
186
n
186
LYS
186
H
THR
187
n
187
THR
187
H
HIS
188
n
188
HIS
188
H
MET
189
n
189
MET
189
H
THR
190
n
190
THR
190
H
HIS
191
n
191
HIS
191
H
HIS
192
n
192
HIS
192
H
ALA
193
n
193
ALA
193
H
VAL
194
n
194
VAL
194
H
SER
195
n
195
SER
195
H
ASP
196
n
196
ASP
196
H
HIS
197
n
197
HIS
197
H
GLU
198
n
198
GLU
198
H
ALA
199
n
199
ALA
199
H
THR
200
n
200
THR
200
H
LEU
201
n
201
LEU
201
H
ARG
202
n
202
ARG
202
H
CYS
203
n
203
CYS
203
H
TRP
204
n
204
TRP
204
H
ALA
205
n
205
ALA
205
H
LEU
206
n
206
LEU
206
H
SER
207
n
207
SER
207
H
PHE
208
n
208
PHE
208
H
TYR
209
n
209
TYR
209
H
PRO
210
n
210
PRO
210
H
ALA
211
n
211
ALA
211
H
GLU
212
n
212
GLU
212
H
ILE
213
n
213
ILE
213
H
THR
214
n
214
THR
214
H
LEU
215
n
215
LEU
215
H
THR
216
n
216
THR
216
H
TRP
217
n
217
TRP
217
H
GLN
218
n
218
GLN
218
H
ARG
219
n
219
ARG
219
H
ASP
220
n
220
ASP
220
H
GLY
221
n
221
GLY
221
H
GLU
222
n
222
GLU
222
H
ASP
223
n
223
ASP
223
H
GLN
224
n
224
GLN
224
H
THR
225
n
225
THR
225
H
GLN
226
n
226
GLN
226
H
ASP
227
n
227
ASP
227
H
THR
228
n
228
THR
228
H
GLU
229
n
229
GLU
229
H
LEU
230
n
230
LEU
230
H
VAL
231
n
231
VAL
231
H
GLU
232
n
232
GLU
232
H
THR
233
n
233
THR
233
H
ARG
234
n
234
ARG
234
H
PRO
235
n
235
PRO
235
H
ALA
236
n
236
ALA
236
H
GLY
237
n
237
GLY
237
H
ASP
238
n
238
ASP
238
H
GLY
239
n
239
GLY
239
H
THR
240
n
240
THR
240
H
PHE
241
n
241
PHE
241
H
GLN
242
n
242
GLN
242
H
LYS
243
n
243
LYS
243
H
TRP
244
n
244
TRP
244
H
VAL
245
n
245
VAL
245
H
ALA
246
n
246
ALA
246
H
VAL
247
n
247
VAL
247
H
VAL
248
n
248
VAL
248
H
VAL
249
n
249
VAL
249
H
PRO
250
n
250
PRO
250
H
SER
251
n
251
SER
251
H
GLY
252
n
252
GLY
252
H
GLN
253
n
253
GLN
253
H
GLU
254
n
254
GLU
254
H
GLN
255
n
255
GLN
255
H
ARG
256
n
256
ARG
256
H
TYR
257
n
257
TYR
257
H
THR
258
n
258
THR
258
H
CYS
259
n
259
CYS
259
H
HIS
260
n
260
HIS
260
H
VAL
261
n
261
VAL
261
H
GLN
262
n
262
GLN
262
H
HIS
263
n
263
HIS
263
H
GLU
264
n
264
GLU
264
H
GLY
265
n
265
GLY
265
H
LEU
266
n
266
LEU
266
H
PRO
267
n
267
PRO
267
H
LYS
268
n
268
LYS
268
H
PRO
269
n
269
PRO
269
H
LEU
270
n
270
LEU
270
H
THR
271
n
271
THR
271
H
LEU
272
n
272
LEU
272
H
ARG
273
n
273
ARG
273
H
TRP
274
n
274
TRP
274
H
ASN
1
n
1
ASN
1
P
LEU
2
n
2
LEU
2
P
VAL
3
n
3
VAL
3
P
PRO
4
n
4
PRO
4
P
MET
5
n
5
MET
5
P
VAL
6
n
6
VAL
6
P
ALA
7
n
7
ALA
7
P
THR
8
n
8
THR
8
P
VAL
9
n
9
VAL
9
P
MET
0
n
1
MET
0
L
ILE
1
n
2
ILE
1
L
GLN
2
n
3
GLN
2
L
ARG
3
n
4
ARG
3
L
THR
4
n
5
THR
4
L
PRO
5
n
6
PRO
5
L
LYS
6
n
7
LYS
6
L
ILE
7
n
8
ILE
7
L
GLN
8
n
9
GLN
8
L
VAL
9
n
10
VAL
9
L
TYR
10
n
11
TYR
10
L
SER
11
n
12
SER
11
L
ARG
12
n
13
ARG
12
L
HIS
13
n
14
HIS
13
L
PRO
14
n
15
PRO
14
L
ALA
15
n
16
ALA
15
L
GLU
16
n
17
GLU
16
L
ASN
17
n
18
ASN
17
L
GLY
18
n
19
GLY
18
L
LYS
19
n
20
LYS
19
L
SER
20
n
21
SER
20
L
ASN
21
n
22
ASN
21
L
PHE
22
n
23
PHE
22
L
LEU
23
n
24
LEU
23
L
ASN
24
n
25
ASN
24
L
CYS
25
n
26
CYS
25
L
TYR
26
n
27
TYR
26
L
VAL
27
n
28
VAL
27
L
SER
28
n
29
SER
28
L
GLY
29
n
30
GLY
29
L
PHE
30
n
31
PHE
30
L
HIS
31
n
32
HIS
31
L
PRO
32
n
33
PRO
32
L
SER
33
n
34
SER
33
L
ASP
34
n
35
ASP
34
L
ILE
35
n
36
ILE
35
L
GLU
36
n
37
GLU
36
L
VAL
37
n
38
VAL
37
L
ASP
38
n
39
ASP
38
L
LEU
39
n
40
LEU
39
L
LEU
40
n
41
LEU
40
L
LYS
41
n
42
LYS
41
L
ASN
42
n
43
ASN
42
L
GLY
43
n
44
GLY
43
L
GLU
44
n
45
GLU
44
L
ARG
45
n
46
ARG
45
L
ILE
46
n
47
ILE
46
L
GLU
47
n
48
GLU
47
L
LYS
48
n
49
LYS
48
L
VAL
49
n
50
VAL
49
L
GLU
50
n
51
GLU
50
L
HIS
51
n
52
HIS
51
L
SER
52
n
53
SER
52
L
ASP
53
n
54
ASP
53
L
LEU
54
n
55
LEU
54
L
SER
55
n
56
SER
55
L
PHE
56
n
57
PHE
56
L
SER
57
n
58
SER
57
L
LYS
58
n
59
LYS
58
L
ASP
59
n
60
ASP
59
L
TRP
60
n
61
TRP
60
L
SER
61
n
62
SER
61
L
PHE
62
n
63
PHE
62
L
TYR
63
n
64
TYR
63
L
LEU
64
n
65
LEU
64
L
LEU
65
n
66
LEU
65
L
TYR
66
n
67
TYR
66
L
TYR
67
n
68
TYR
67
L
THR
68
n
69
THR
68
L
GLU
69
n
70
GLU
69
L
PHE
70
n
71
PHE
70
L
THR
71
n
72
THR
71
L
PRO
72
n
73
PRO
72
L
THR
73
n
74
THR
73
L
GLU
74
n
75
GLU
74
L
LYS
75
n
76
LYS
75
L
ASP
76
n
77
ASP
76
L
GLU
77
n
78
GLU
77
L
TYR
78
n
79
TYR
78
L
ALA
79
n
80
ALA
79
L
CYS
80
n
81
CYS
80
L
ARG
81
n
82
ARG
81
L
VAL
82
n
83
VAL
82
L
ASN
83
n
84
ASN
83
L
HIS
84
n
85
HIS
84
L
VAL
85
n
86
VAL
85
L
THR
86
n
87
THR
86
L
LEU
87
n
88
LEU
87
L
SER
88
n
89
SER
88
L
GLN
89
n
90
GLN
89
L
PRO
90
n
91
PRO
90
L
LYS
91
n
92
LYS
91
L
ILE
92
n
93
ILE
92
L
VAL
93
n
94
VAL
93
L
LYS
94
n
95
LYS
94
L
TRP
95
n
96
TRP
95
L
ASP
96
n
97
ASP
96
L
ARG
97
n
98
ARG
97
L
ASP
98
n
99
ASP
98
L
MET
99
n
100
MET
99
L
LEU
2
n
1
LEU
2
A
ASN
3
n
2
ASN
3
A
VAL
4
n
3
VAL
4
A
GLU
5
n
4
GLU
5
A
GLN
6
n
5
GLN
6
A
SER
7
n
6
SER
7
A
PRO
8
n
7
PRO
8
A
GLN
9
n
8
GLN
9
A
SER
10
n
9
SER
10
A
LEU
11
n
10
LEU
11
A
HIS
12
n
11
HIS
12
A
VAL
13
n
12
VAL
13
A
GLN
14
n
13
GLN
14
A
GLU
15
n
14
GLU
15
A
GLY
16
n
15
GLY
16
A
ASP
17
n
16
ASP
17
A
SER
18
n
17
SER
18
A
THR
19
n
18
THR
19
A
ASN
20
n
19
ASN
20
A
PHE
21
n
20
PHE
21
A
THR
22
n
21
THR
22
A
CYS
23
n
22
CYS
23
A
SER
24
n
23
SER
24
A
PHE
25
n
24
PHE
25
A
PRO
26
n
25
PRO
26
A
SER
27
n
26
SER
27
A
SER
28
n
27
SER
28
A
ASN
29
n
28
ASN
29
A
PHE
30
n
29
PHE
30
A
TYR
31
n
30
TYR
31
A
ALA
32
n
31
ALA
32
A
LEU
33
n
32
LEU
33
A
HIS
34
n
33
HIS
34
A
TRP
35
n
34
TRP
35
A
TYR
36
n
35
TYR
36
A
ARG
37
n
36
ARG
37
A
TRP
38
n
37
TRP
38
A
GLU
39
n
38
GLU
39
A
THR
40
n
39
THR
40
A
ALA
41
n
40
ALA
41
A
LYS
42
n
41
LYS
42
A
SER
43
n
42
SER
43
A
PRO
44
n
43
PRO
44
A
GLU
45
n
44
GLU
45
A
ALA
46
n
45
ALA
46
A
LEU
47
n
46
LEU
47
A
PHE
48
n
47
PHE
48
A
VAL
49
n
48
VAL
49
A
MET
50
n
49
MET
50
A
THR
51
n
50
THR
51
A
LEU
52
n
51
LEU
52
A
ASN
53
n
52
ASN
53
A
GLY
54
n
53
GLY
54
A
ASP
55
n
54
ASP
55
A
GLU
56
n
55
GLU
56
A
LYS
57
n
56
LYS
57
A
LYS
58
n
57
LYS
58
A
LYS
59
n
58
LYS
59
A
GLY
60
n
59
GLY
60
A
ARG
61
n
60
ARG
61
A
ILE
62
n
61
ILE
62
A
SER
63
n
62
SER
63
A
ALA
64
n
63
ALA
64
A
THR
65
n
64
THR
65
A
LEU
66
n
65
LEU
66
A
ASN
67
n
66
ASN
67
A
THR
68
n
67
THR
68
A
LYS
69
n
68
LYS
69
A
GLU
70
n
69
GLU
70
A
GLY
71
n
70
GLY
71
A
TYR
72
n
71
TYR
72
A
SER
73
n
72
SER
73
A
TYR
74
n
73
TYR
74
A
LEU
75
n
74
LEU
75
A
TYR
76
n
75
TYR
76
A
ILE
77
n
76
ILE
77
A
LYS
78
n
77
LYS
78
A
GLY
79
n
78
GLY
79
A
SER
80
n
79
SER
80
A
GLN
81
n
80
GLN
81
A
PRO
82
n
81
PRO
82
A
GLU
83
n
82
GLU
83
A
ASP
84
n
83
ASP
84
A
SER
85
n
84
SER
85
A
ALA
86
n
85
ALA
86
A
THR
87
n
86
THR
87
A
TYR
88
n
87
TYR
88
A
LEU
89
n
88
LEU
89
A
CYS
90
n
89
CYS
90
A
ALA
91
n
90
ALA
91
A
ARG
92
n
91
ARG
92
A
ASN
93
n
92
ASN
93
A
THR
94
n
93
THR
94
A
GLY
95
n
94
GLY
95
A
ASN
96
n
95
ASN
96
A
GLN
97
n
96
GLN
97
A
PHE
98
n
97
PHE
98
A
TYR
99
n
98
TYR
99
A
PHE
100
n
99
PHE
100
A
GLY
101
n
100
GLY
101
A
THR
102
n
101
THR
102
A
GLY
103
n
102
GLY
103
A
THR
104
n
103
THR
104
A
SER
105
n
104
SER
105
A
LEU
106
n
105
LEU
106
A
THR
107
n
106
THR
107
A
VAL
108
n
107
VAL
108
A
ILE
109
n
108
ILE
109
A
PRO
110
n
109
PRO
110
A
ASN
111
n
110
ASN
111
A
ILE
112
n
111
ILE
112
A
GLN
113
n
112
GLN
113
A
ASN
114
n
113
ASN
114
A
PRO
115
n
114
PRO
115
A
ASP
116
n
115
ASP
116
A
PRO
117
n
116
PRO
117
A
ALA
118
n
117
ALA
118
A
VAL
119
n
118
VAL
119
A
TYR
120
n
119
TYR
120
A
GLN
121
n
120
GLN
121
A
LEU
122
n
121
LEU
122
A
ARG
123
n
122
ARG
123
A
ASP
124
n
123
ASP
124
A
SER
125
n
124
SER
125
A
LYS
126
n
125
LYS
126
A
SER
127
n
126
SER
127
A
SER
128
n
127
SER
128
A
ASP
129
n
128
ASP
129
A
LYS
130
n
129
LYS
130
A
SER
131
n
130
SER
131
A
VAL
132
n
131
VAL
132
A
CYS
133
n
132
CYS
133
A
LEU
134
n
133
LEU
134
A
PHE
135
n
134
PHE
135
A
THR
136
n
135
THR
136
A
ASP
137
n
136
ASP
137
A
PHE
138
n
137
PHE
138
A
ASP
139
n
138
ASP
139
A
SER
140
n
139
SER
140
A
GLN
141
n
140
GLN
141
A
THR
142
n
141
THR
142
A
ASN
143
n
142
ASN
143
A
VAL
144
n
143
VAL
144
A
SER
145
n
144
SER
145
A
GLN
146
n
145
GLN
146
A
SER
147
n
146
SER
147
A
LYS
148
n
147
LYS
148
A
ASP
149
n
148
ASP
149
A
SER
150
n
149
SER
150
A
ASP
151
n
150
ASP
151
A
ALA
152
n
151
ALA
152
A
TYR
153
n
152
TYR
153
A
ILE
154
n
153
ILE
154
A
THR
155
n
154
THR
155
A
ASP
156
n
155
ASP
156
A
LYS
157
n
156
LYS
157
A
THR
158
n
157
THR
158
A
VAL
159
n
158
VAL
159
A
LEU
160
n
159
LEU
160
A
ASP
161
n
160
ASP
161
A
MET
162
n
161
MET
162
A
ARG
163
n
162
ARG
163
A
SER
164
n
163
SER
164
A
MET
165
n
164
MET
165
A
ASP
166
n
165
ASP
166
A
PHE
167
n
166
PHE
167
A
LYS
168
n
167
LYS
168
A
SER
169
n
168
SER
169
A
ASN
170
n
169
ASN
170
A
SER
171
n
170
SER
171
A
ALA
172
n
171
ALA
172
A
VAL
173
n
172
VAL
173
A
ALA
174
n
173
ALA
174
A
TRP
175
n
174
TRP
175
A
SER
176
n
175
SER
176
A
ASN
177
n
176
ASN
177
A
LYS
178
n
177
LYS
178
A
SER
179
n
178
SER
179
A
ASP
180
n
179
ASP
180
A
PHE
181
n
180
PHE
181
A
ALA
182
n
181
ALA
182
A
CYS
183
n
182
CYS
183
A
ALA
184
n
183
ALA
184
A
ASN
185
n
184
ASN
185
A
ALA
186
n
185
ALA
186
A
PHE
187
n
186
PHE
187
A
ASN
188
n
187
ASN
188
A
ASN
189
n
188
ASN
189
A
SER
190
n
189
SER
190
A
ILE
191
n
190
ILE
191
A
ILE
192
n
191
ILE
192
A
PRO
193
n
192
PRO
193
A
GLU
194
n
193
GLU
194
A
ASP
195
n
194
ASP
195
A
THR
196
n
195
THR
196
A
PHE
197
n
196
PHE
197
A
PHE
198
n
197
PHE
198
A
PRO
199
n
198
PRO
199
A
SER
200
n
199
SER
200
A
MET
2
n
1
MET
2
B
GLY
3
n
2
GLY
3
B
VAL
4
n
3
VAL
4
B
THR
5
n
4
THR
5
B
GLN
6
n
5
GLN
6
B
THR
7
n
6
THR
7
B
PRO
8
n
7
PRO
8
B
LYS
9
n
8
LYS
9
B
PHE
10
n
9
PHE
10
B
GLN
11
n
10
GLN
11
B
VAL
12
n
11
VAL
12
B
LEU
13
n
12
LEU
13
B
LYS
14
n
13
LYS
14
B
THR
15
n
14
THR
15
B
GLY
16
n
15
GLY
16
B
GLN
17
n
16
GLN
17
B
SER
18
n
17
SER
18
B
MET
19
n
18
MET
19
B
THR
20
n
19
THR
20
B
LEU
21
n
20
LEU
21
B
GLN
22
n
21
GLN
22
B
CYS
23
n
22
CYS
23
B
ALA
24
n
23
ALA
24
B
GLN
25
n
24
GLN
25
B
ASP
26
n
25
ASP
26
B
MET
27
n
26
MET
27
B
ASN
28
n
27
ASN
28
B
HIS
29
n
28
HIS
29
B
GLU
30
n
29
GLU
30
B
TYR
31
n
30
TYR
31
B
MET
32
n
31
MET
32
B
SER
33
n
32
SER
33
B
TRP
34
n
33
TRP
34
B
TYR
35
n
34
TYR
35
B
ARG
36
n
35
ARG
36
B
GLN
37
n
36
GLN
37
B
ASP
38
n
37
ASP
38
B
PRO
39
n
38
PRO
39
B
GLY
40
n
39
GLY
40
B
MET
41
n
40
MET
41
B
GLY
42
n
41
GLY
42
B
LEU
43
n
42
LEU
43
B
ARG
44
n
43
ARG
44
B
LEU
45
n
44
LEU
45
B
ILE
46
n
45
ILE
46
B
HIS
47
n
46
HIS
47
B
TYR
48
n
47
TYR
48
B
SER
49
n
48
SER
49
B
VAL
50
n
49
VAL
50
B
GLY
51
n
50
GLY
51
B
ALA
52
n
51
ALA
52
B
GLY
53
n
52
GLY
53
B
ILE
54
n
53
ILE
54
B
THR
55
n
54
THR
55
B
ASP
56
n
55
ASP
56
B
GLN
57
n
56
GLN
57
B
GLY
58
n
57
GLY
58
B
GLU
59
n
58
GLU
59
B
VAL
60
n
59
VAL
60
B
PRO
61
n
60
PRO
61
B
ASN
62
n
61
ASN
62
B
GLY
63
n
62
GLY
63
B
TYR
64
n
63
TYR
64
B
ASN
65
n
64
ASN
65
B
VAL
66
n
65
VAL
66
B
SER
67
n
66
SER
67
B
ARG
68
n
67
ARG
68
B
SER
69
n
68
SER
69
B
THR
70
n
69
THR
70
B
THR
71
n
70
THR
71
B
GLU
72
n
71
GLU
72
B
ASP
73
n
72
ASP
73
B
PHE
74
n
73
PHE
74
B
PRO
75
n
74
PRO
75
B
LEU
76
n
75
LEU
76
B
ARG
77
n
76
ARG
77
B
LEU
78
n
77
LEU
78
B
LEU
79
n
78
LEU
79
B
SER
80
n
79
SER
80
B
ALA
81
n
80
ALA
81
B
ALA
82
n
81
ALA
82
B
PRO
83
n
82
PRO
83
B
SER
84
n
83
SER
84
B
GLN
85
n
84
GLN
85
B
THR
86
n
85
THR
86
B
SER
87
n
86
SER
87
B
VAL
88
n
87
VAL
88
B
TYR
89
n
88
TYR
89
B
PHE
90
n
89
PHE
90
B
CYS
91
n
90
CYS
91
B
ALA
92
n
91
ALA
92
B
SER
93
n
92
SER
93
B
SER
94
n
93
SER
94
B
PRO
95
n
94
PRO
95
B
VAL
96
n
95
VAL
96
B
THR
97
n
96
THR
97
B
GLY
98
n
97
GLY
98
B
GLY
99
n
98
GLY
99
B
ILE
100
n
99
ILE
100
B
TYR
101
n
100
TYR
101
B
GLY
102
n
101
GLY
102
B
TYR
103
n
102
TYR
103
B
THR
104
n
103
THR
104
B
PHE
105
n
104
PHE
105
B
GLY
106
n
105
GLY
106
B
SER
107
n
106
SER
107
B
GLY
108
n
107
GLY
108
B
THR
109
n
108
THR
109
B
ARG
110
n
109
ARG
110
B
LEU
111
n
110
LEU
111
B
THR
112
n
111
THR
112
B
VAL
113
n
112
VAL
113
B
VAL
114
n
113
VAL
114
B
GLU
115
n
114
GLU
115
B
ASP
116
n
115
ASP
116
B
LEU
117
n
116
LEU
117
B
ASN
118
n
117
ASN
118
B
LYS
119
n
118
LYS
119
B
VAL
120
n
119
VAL
120
B
PHE
121
n
120
PHE
121
B
PRO
122
n
121
PRO
122
B
PRO
123
n
122
PRO
123
B
GLU
124
n
123
GLU
124
B
VAL
125
n
124
VAL
125
B
ALA
126
n
125
ALA
126
B
VAL
127
n
126
VAL
127
B
PHE
128
n
127
PHE
128
B
GLU
129
n
128
GLU
129
B
PRO
130
n
129
PRO
130
B
SER
131
n
130
SER
131
B
GLU
132
n
131
GLU
132
B
ALA
133
n
132
ALA
133
B
GLU
134
n
133
GLU
134
B
ILE
135
n
134
ILE
135
B
SER
136
n
135
SER
136
B
HIS
137
n
136
HIS
137
B
THR
138
n
137
THR
138
B
GLN
139
n
138
GLN
139
B
LYS
140
n
139
LYS
140
B
ALA
141
n
140
ALA
141
B
THR
142
n
141
THR
142
B
LEU
143
n
142
LEU
143
B
VAL
144
n
143
VAL
144
B
CYS
145
n
144
CYS
145
B
LEU
146
n
145
LEU
146
B
ALA
147
n
146
ALA
147
B
THR
148
n
147
THR
148
B
GLY
149
n
148
GLY
149
B
PHE
150
n
149
PHE
150
B
PHE
151
n
150
PHE
151
B
PRO
152
n
151
PRO
152
B
ASP
153
n
152
ASP
153
B
HIS
154
n
153
HIS
154
B
VAL
155
n
154
VAL
155
B
GLU
156
n
155
GLU
156
B
LEU
157
n
156
LEU
157
B
SER
158
n
157
SER
158
B
TRP
159
n
158
TRP
159
B
TRP
160
n
159
TRP
160
B
VAL
161
n
160
VAL
161
B
ASN
162
n
161
ASN
162
B
GLY
163
n
162
GLY
163
B
LYS
164
n
163
LYS
164
B
GLU
165
n
164
GLU
165
B
VAL
166
n
165
VAL
166
B
HIS
167
n
166
HIS
167
B
SER
168
n
167
SER
168
B
GLY
169
n
168
GLY
169
B
VAL
170
n
169
VAL
170
B
SER
171
n
170
SER
171
B
THR
172
n
171
THR
172
B
ASP
173
n
172
ASP
173
B
PRO
174
n
173
PRO
174
B
GLN
175
n
174
GLN
175
B
PRO
176
n
175
PRO
176
B
LEU
177
n
176
LEU
177
B
LYS
178
n
177
LYS
178
B
GLU
179
n
178
GLU
179
B
GLN
180
n
179
GLN
180
B
PRO
181
n
180
PRO
181
B
ALA
182
n
181
ALA
182
B
LEU
183
n
182
LEU
183
B
ASN
184
n
183
ASN
184
B
ASP
185
n
184
ASP
185
B
SER
186
n
185
SER
186
B
ARG
187
n
186
ARG
187
B
TYR
188
n
187
TYR
188
B
CYS
189
n
188
CYS
189
B
LEU
190
n
189
LEU
190
B
SER
191
n
190
SER
191
B
SER
192
n
191
SER
192
B
ARG
193
n
192
ARG
193
B
LEU
194
n
193
LEU
194
B
ARG
195
n
194
ARG
195
B
VAL
196
n
195
VAL
196
B
SER
197
n
196
SER
197
B
ALA
198
n
197
ALA
198
B
THR
199
n
198
THR
199
B
PHE
200
n
199
PHE
200
B
TRP
201
n
200
TRP
201
B
GLN
202
n
201
GLN
202
B
ASN
203
n
202
ASN
203
B
PRO
204
n
203
PRO
204
B
ARG
205
n
204
ARG
205
B
ASN
206
n
205
ASN
206
B
HIS
207
n
206
HIS
207
B
PHE
208
n
207
PHE
208
B
ARG
209
n
208
ARG
209
B
CYS
210
n
209
CYS
210
B
GLN
211
n
210
GLN
211
B
VAL
212
n
211
VAL
212
B
GLN
213
n
212
GLN
213
B
PHE
214
n
213
PHE
214
B
TYR
215
n
214
TYR
215
B
GLY
216
n
215
GLY
216
B
LEU
217
n
216
LEU
217
B
SER
218
n
217
SER
218
B
GLU
219
n
218
GLU
219
B
ASN
220
n
219
ASN
220
B
ASP
221
n
220
ASP
221
B
GLU
222
n
221
GLU
222
B
TRP
223
n
222
TRP
223
B
THR
224
n
223
THR
224
B
GLN
225
n
224
GLN
225
B
ASP
226
n
225
ASP
226
B
ARG
227
n
226
ARG
227
B
ALA
228
n
227
ALA
228
B
LYS
229
n
228
LYS
229
B
PRO
230
n
229
PRO
230
B
VAL
231
n
230
VAL
231
B
THR
232
n
231
THR
232
B
GLN
233
n
232
GLN
233
B
ILE
234
n
233
ILE
234
B
VAL
235
n
234
VAL
235
B
SER
236
n
235
SER
236
B
ALA
237
n
236
ALA
237
B
GLU
238
n
237
GLU
238
B
ALA
239
n
238
ALA
239
B
TRP
240
n
239
TRP
240
B
GLY
241
n
240
GLY
241
B
ARG
242
n
241
ARG
242
B
ALA
243
n
242
ALA
243
B
ASP
244
n
243
ASP
244
B
author_and_software_defined_assembly
PISA
5
pentameric
10940
-76
38090
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
H
O
GLU
46
A
O
GLU
46
H
N
ARG
35
A
N
ARG
35
H
O
PHE
36
A
O
PHE
36
H
N
ALA
24
A
N
ALA
24
H
O
TYR
27
A
O
TYR
27
H
N
ARG
6
A
N
ARG
6
H
N
PHE
9
A
N
PHE
9
H
O
ARG
97
A
O
ARG
97
H
N
ASP
102
A
N
ASP
102
H
O
ARG
111
A
O
ARG
111
H
N
HIS
114
A
N
HIS
114
H
O
LEU
126
A
O
LEU
126
H
N
ALA
125
A
N
ALA
125
H
O
THR
134
A
O
THR
134
H
N
THR
190
A
N
THR
190
H
O
ARG
202
A
O
ARG
202
H
N
CYS
203
A
N
CYS
203
H
O
VAL
245
A
O
VAL
245
H
O
GLN
242
A
O
GLN
242
H
N
ARG
234
A
N
ARG
234
H
N
ALA
199
A
N
ALA
199
H
O
VAL
249
A
O
VAL
249
H
N
THR
216
A
N
THR
216
H
O
HIS
260
A
O
HIS
260
H
N
ARG
219
A
N
ARG
219
H
O
GLU
222
A
O
GLU
222
L
N
TYR
10
C
N
TYR
11
L
O
ASN
24
C
O
ASN
25
L
N
LEU
23
C
N
LEU
24
L
O
THR
68
C
O
THR
69
L
O
TYR
67
C
O
TYR
68
L
N
GLU
50
C
N
GLU
51
L
N
TYR
10
C
N
TYR
11
L
O
ASN
24
C
O
ASN
25
L
N
LEU
23
C
N
LEU
24
L
O
THR
68
C
O
THR
69
L
O
TYR
63
C
O
TYR
64
L
N
SER
55
C
N
SER
56
L
N
LEU
40
C
N
LEU
41
L
O
ALA
79
C
O
ALA
80
L
N
VAL
82
C
N
VAL
83
L
O
LYS
91
C
O
LYS
92
A
N
SER
7
D
N
SER
6
A
O
THR
22
D
O
THR
21
A
N
CYS
23
D
N
CYS
22
A
O
SER
73
D
O
SER
72
A
N
LEU
11
D
N
LEU
10
A
O
THR
107
D
O
THR
106
A
O
THR
104
D
O
THR
103
A
N
TYR
88
D
N
TYR
87
A
O
THR
87
D
O
THR
86
A
N
TRP
38
D
N
TRP
37
A
N
TRP
35
D
N
TRP
34
A
O
LEU
47
D
O
LEU
46
A
N
LEU
11
D
N
LEU
10
A
O
THR
107
D
O
THR
106
A
O
THR
104
D
O
THR
103
A
N
TYR
88
D
N
TYR
87
A
N
ARG
92
D
N
ARG
91
A
O
TYR
99
D
O
TYR
98
A
N
LYS
59
D
N
LYS
58
A
O
ILE
62
D
O
ILE
61
A
N
TYR
120
D
N
TYR
119
A
O
LEU
134
D
O
LEU
133
A
N
CYS
133
D
N
CYS
132
A
O
ALA
174
D
O
ALA
173
A
O
TRP
175
D
O
TRP
174
A
N
TYR
153
D
N
TYR
152
B
N
THR
7
E
N
THR
6
B
O
GLN
22
E
O
GLN
21
B
N
LEU
21
E
N
LEU
20
B
O
LEU
76
E
O
LEU
75
B
O
ARG
77
E
O
ARG
76
B
N
ASN
65
E
N
ASN
64
B
N
LEU
13
E
N
LEU
12
B
O
VAL
114
E
O
VAL
113
B
O
LEU
111
E
O
LEU
110
B
N
SER
87
E
N
SER
86
B
O
ALA
92
E
O
ALA
91
B
N
SER
33
E
N
SER
32
B
N
TRP
34
E
N
TRP
33
B
O
ILE
46
E
O
ILE
45
B
N
TYR
48
E
N
TYR
47
B
O
ASP
56
E
O
ASP
55
B
N
LEU
13
E
N
LEU
12
B
O
VAL
114
E
O
VAL
113
B
O
LEU
111
E
O
LEU
110
B
N
SER
87
E
N
SER
86
B
N
SER
93
E
N
SER
92
B
O
THR
104
E
O
THR
103
B
N
ALA
126
E
N
ALA
125
B
O
LEU
146
E
O
LEU
145
B
N
LEU
143
E
N
LEU
142
B
O
LEU
194
E
O
LEU
193
B
O
ARG
193
E
O
ARG
192
B
N
SER
171
E
N
SER
170
B
N
ALA
126
E
N
ALA
125
B
O
LEU
146
E
O
LEU
145
B
N
LEU
143
E
N
LEU
142
B
O
LEU
194
E
O
LEU
193
B
O
CYS
189
E
O
CYS
188
B
N
LEU
177
E
N
LEU
176
B
N
SER
158
E
N
SER
157
B
O
GLN
211
E
O
GLN
210
B
N
PHE
208
E
N
PHE
207
B
O
ALA
239
E
O
ALA
238
1
A
A
O
OG
ASP
SER
151
176
2.14
1
A
A
NE1
O
TRP
LYS
38
42
2.15
1
9.55
1.50
119.30
128.85
H
H
H
C
N
CA
ALA
PRO
PRO
49
50
50
Y
1
H
PRO
15
-41.14
-86.36
1
H
ARG
17
-59.67
178.93
1
H
ASP
29
42.44
83.09
1
H
ASP
30
59.72
11.95
1
H
PRO
50
-41.88
-7.61
1
H
GLU
55
168.11
49.79
1
H
PRO
57
-114.96
-82.54
1
H
ASP
77
-37.06
-31.26
1
H
ALA
90
-57.88
-100.80
1
H
TRP
107
98.20
9.85
1
H
PHE
109
-37.96
122.83
1
H
HIS
114
-162.98
106.88
1
H
TYR
123
-132.27
-46.75
1
H
GLU
166
-34.33
-32.69
1
H
HIS
191
-163.43
115.81
1
H
SER
195
-159.85
-140.68
1
H
HIS
197
-159.62
-25.97
1
H
THR
200
-117.00
-80.19
1
H
LEU
201
80.44
103.08
1
H
ALA
205
-163.71
112.68
1
H
SER
207
38.95
54.20
1
H
ASP
220
77.17
35.93
1
H
THR
225
37.09
15.08
1
H
GLU
229
-168.88
88.17
1
H
GLU
254
-141.94
-44.85
1
H
GLN
255
-70.07
22.62
1
H
THR
258
-105.98
-161.36
1
H
HIS
263
177.19
145.37
1
H
PRO
267
-48.03
-84.56
1
H
PRO
269
-53.61
72.44
1
H
LEU
270
-39.62
131.82
1
L
HIS
13
-97.76
-140.46
1
L
LYS
19
-82.04
-150.90
1
L
ASN
21
-113.11
-166.23
1
L
GLU
47
-43.92
-90.90
1
L
ARG
97
-74.84
-70.42
1
A
ASN
20
-178.29
74.86
1
A
PHE
21
-66.88
-170.87
1
A
ASN
29
87.37
20.56
1
A
TYR
31
-138.04
-36.71
1
A
LEU
47
-98.76
-75.38
1
A
THR
51
-130.67
-53.74
1
A
ALA
64
-171.13
148.41
1
A
LYS
78
-71.64
-153.54
1
A
ALA
86
162.63
166.47
1
A
THR
94
-140.41
-40.07
1
A
ASN
96
56.19
3.07
1
A
ASN
114
20.80
88.75
1
A
ASP
124
-68.17
-136.48
1
A
SER
127
38.95
-102.65
1
A
LYS
130
51.11
-25.15
1
A
SER
131
12.08
71.02
1
A
THR
142
-94.87
-92.47
1
A
SER
145
-164.52
-67.50
1
A
GLN
146
-116.58
-150.33
1
A
SER
147
-148.88
-128.95
1
A
LYS
148
-63.49
85.76
1
A
SER
150
-153.25
-64.83
1
A
ASP
151
-105.44
46.92
1
A
LEU
160
-131.02
-123.31
1
A
ASP
161
-66.82
-173.37
1
A
MET
162
-97.93
-122.82
1
A
SER
164
-166.06
-51.87
1
A
ASP
166
67.52
132.33
1
A
ASN
170
-116.04
74.45
1
A
SER
179
80.89
-19.35
1
A
PHE
181
-37.98
-75.52
1
A
ALA
182
100.53
102.95
1
A
CYS
183
-67.83
-175.64
1
A
ASN
185
177.48
-12.11
1
A
ASN
189
-57.64
-9.59
1
A
ILE
191
-113.17
79.11
1
A
PRO
193
-64.03
-169.03
1
B
THR
15
-39.02
136.29
1
B
ILE
46
-96.73
-82.28
1
B
ARG
68
-151.39
66.41
1
B
LEU
79
-30.04
-74.37
1
B
SER
87
178.90
-177.95
1
B
TYR
101
-39.45
148.46
1
B
LEU
117
-58.27
-9.75
1
B
GLU
132
-61.46
6.06
1
B
GLN
139
72.20
39.75
1
B
ASN
162
56.95
-15.52
1
B
PRO
181
-57.37
27.77
1
B
LEU
183
-178.85
96.33
1
B
ASN
184
87.75
-3.55
1
B
ARG
209
-160.57
113.29
1
B
GLU
219
-57.76
89.00
1
B
ASN
220
174.04
-43.43
1
B
ARG
242
-171.75
132.02
52.527
-1.77
0.00
4.54
0.78
-0.00
2.87
0.904
0.28987
0.21485
0.23718
2.80
15.00
2277
22857
10.0
94.82
1.00
0.30
13.701
0.265
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.80
0.80
1.40
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
2.80
15.00
24
6647
6
0
6617
0.006
0.021
6806
0.962
1.929
9255
5.639
5.000
820
33.681
23.884
345
19.717
15.000
1085
18.440
15.000
45
0.068
0.200
972
0.004
0.021
5324
0.261
0.300
3376
0.333
0.500
4542
0.247
0.500
393
0.265
0.300
65
0.347
0.500
6
0.506
2.000
4116
0.920
3.000
6657
0.589
3.000
2690
0.923
4.000
2598
0.451
0.345
2.896
179
1650
15
79.90
53.064
2.800
20
3GSN
22991
0
0
0.117
0.117
1
11.08
3.72
94.5
0.444
2.80
2.90
2.37
0.444
2.66
78.7
data scaling
Wolfgang Kabsch
http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html
XSCALE
package
phasing
Jorge Navaza
ccp4@ccp4.ac.uk
Fortran_77
http://www.ccp4.ac.uk/
AMoRE
program
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
5.2.0019
data extraction
PDB
help@deposit.rcsb.org
June 11, 2008
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.006
data collection
ADSC
Quantum
data reduction
XDS
Crystal structure of the public RA14 TCR in complex with the HCMV dominant NLV/HLA-A2 epitope
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
6
N
N
7
N
N
8
N
N
8
N
N
8
N
N
8
N
N
H
GLU
58
A
GLU
58
HELX_P
H
TYR
85
A
TYR
85
1
1
28
H
MET
138
A
MET
138
HELX_P
H
ALA
150
A
ALA
150
1
2
13
H
HIS
151
A
HIS
151
HELX_P
H
GLY
162
A
GLY
162
1
3
12
H
GLY
162
A
GLY
162
HELX_P
H
GLY
175
A
GLY
175
1
4
14
H
GLY
175
A
GLY
175
HELX_P
H
GLN
180
A
GLN
180
1
5
6
A
GLN
81
D
GLN
80
HELX_P
A
SER
85
D
SER
84
5
6
5
B
ALA
82
E
ALA
81
HELX_P
B
THR
86
E
THR
85
5
7
5
B
ASP
116
E
ASP
115
HELX_P
B
VAL
120
E
VAL
119
5
8
5
B
GLU
134
E
GLU
133
HELX_P
B
GLN
139
E
GLN
138
1
9
6
B
ALA
198
E
ALA
197
HELX_P
B
ASN
203
E
ASN
202
1
10
6
disulf
2.033
H
CYS
101
A
SG
CYS
101
1_555
H
CYS
164
A
SG
CYS
164
1_555
disulf
2.031
H
CYS
203
A
SG
CYS
203
1_555
H
CYS
259
A
SG
CYS
259
1_555
disulf
2.034
L
CYS
25
C
SG
CYS
26
1_555
L
CYS
80
C
SG
CYS
81
1_555
disulf
2.043
A
CYS
23
D
SG
CYS
22
1_555
A
CYS
90
D
SG
CYS
89
1_555
disulf
2.032
A
CYS
133
D
SG
CYS
132
1_555
A
CYS
183
D
SG
CYS
182
1_555
disulf
2.031
B
CYS
23
E
SG
CYS
22
1_555
B
CYS
91
E
SG
CYS
90
1_555
disulf
2.034
B
CYS
145
E
SG
CYS
144
1_555
B
CYS
210
E
SG
CYS
209
1_555
IMMUNE SYSTEM
HLA, HUMAN CYTOMEGALOVIRUS, PP65, T CELL RECEPTOR (TCR), IMMUNE RESPONSE, PUBLIC RESPONSE, IMMUNODOMINANCE, RESTRAINED RESPONSE, HOST-VIRUS INTERACTION, MEMBRANE, MHC I, POLYMORPHISM, IMMUNOGLOBULIN DOMAIN, IMMUNE SYSTEM
H
TYR
209
A
TYR
209
1
H
PRO
210
A
PRO
210
3.35
L
HIS
31
C
HIS
32
1
L
PRO
32
C
PRO
33
5.51
A
SER
7
D
SER
6
1
A
PRO
8
D
PRO
7
-3.11
A
GLY
95
D
GLY
94
1
A
ASN
96
D
ASN
95
0.84
A
ASP
161
D
ASP
160
1
A
MET
162
D
MET
161
5.17
B
MET
2
E
MET
1
1
B
GLY
3
E
GLY
2
3.56
B
THR
7
E
THR
6
1
B
PRO
8
E
PRO
7
2.57
B
PHE
151
E
PHE
150
1
B
PRO
152
E
PRO
151
-1.77
B
ALA
182
E
ALA
181
1
B
LEU
183
E
LEU
182
-2.24
1A02_HUMAN
UNP
1
25
P01892
GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGT
LRGYYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYL
EGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGT
FQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRW
B2MG_HUMAN
UNP
3
21
P61769
IQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYAC
RVNHVTLSQPKIVKWDRDM
3GSN
PDB
2
3GSN
3GSN
PDB
4
3GSN
3GSN
PDB
5
3GSN
25
298
3GSN
1
274
P01892
H
1
1
274
21
119
3GSN
1
99
P61769
L
2
2
100
1
9
3GSN
1
9
3GSN
P
3
1
9
2
200
3GSN
2
200
3GSN
A
4
1
199
2
244
3GSN
2
244
3GSN
B
5
1
243
1
ALA
engineered mutation
VAL
245
3GSN
H
P01892
UNP
269
245
2
initiating methionine
MET
0
3GSN
L
P61769
UNP
1
8
4
2
2
2
4
4
3
3
5
4
2
4
4
6
4
4
4
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
H
GLU
46
A
GLU
46
H
PRO
47
A
PRO
47
H
GLN
32
A
GLN
32
H
ASP
37
A
ASP
37
H
ARG
21
A
ARG
21
H
VAL
28
A
VAL
28
H
HIS
3
A
HIS
3
H
VAL
12
A
VAL
12
H
THR
94
A
THR
94
H
VAL
103
A
VAL
103
H
PHE
109
A
PHE
109
H
TYR
118
A
TYR
118
H
LYS
121
A
LYS
121
H
LEU
126
A
LEU
126
H
TRP
133
A
TRP
133
H
ALA
135
A
ALA
135
H
MET
189
A
MET
189
H
THR
190
A
THR
190
H
ARG
202
A
ARG
202
H
PHE
208
A
PHE
208
H
PHE
241
A
PHE
241
H
ALA
246
A
ALA
246
H
ARG
234
A
ARG
234
H
PRO
235
A
PRO
235
H
GLU
198
A
GLU
198
H
ALA
199
A
ALA
199
H
VAL
249
A
VAL
249
H
PRO
250
A
PRO
250
H
THR
214
A
THR
214
H
THR
216
A
THR
216
H
HIS
260
A
HIS
260
H
GLN
262
A
GLN
262
H
GLN
218
A
GLN
218
H
ARG
219
A
ARG
219
H
GLU
222
A
GLU
222
H
ASP
223
A
ASP
223
L
LYS
6
C
LYS
7
L
TYR
10
C
TYR
11
L
ASN
21
C
ASN
22
L
PHE
30
C
PHE
31
L
PHE
62
C
PHE
63
L
PHE
70
C
PHE
71
L
GLU
50
C
GLU
51
L
HIS
51
C
HIS
52
L
LYS
6
C
LYS
7
L
TYR
10
C
TYR
11
L
ASN
21
C
ASN
22
L
PHE
30
C
PHE
31
L
PHE
62
C
PHE
63
L
PHE
70
C
PHE
71
L
SER
55
C
SER
56
L
PHE
56
C
PHE
57
L
LEU
39
C
LEU
40
L
LYS
41
C
LYS
42
L
TYR
78
C
TYR
79
L
VAL
82
C
VAL
83
L
LYS
91
C
LYS
92
L
LYS
94
C
LYS
95
A
GLU
5
D
GLU
4
A
SER
7
D
SER
6
A
ASN
20
D
ASN
19
A
SER
24
D
SER
23
A
TYR
72
D
TYR
71
A
TYR
76
D
TYR
75
A
SER
10
D
SER
9
A
GLN
14
D
GLN
13
A
THR
104
D
THR
103
A
ILE
109
D
ILE
108
A
ALA
86
D
ALA
85
A
ASN
93
D
ASN
92
A
LEU
33
D
LEU
32
A
TRP
38
D
TRP
37
A
GLU
45
D
GLU
44
A
MET
50
D
MET
49
A
SER
10
D
SER
9
A
GLN
14
D
GLN
13
A
THR
104
D
THR
103
A
ILE
109
D
ILE
108
A
ALA
86
D
ALA
85
A
ASN
93
D
ASN
92
A
PHE
98
D
PHE
97
A
PHE
100
D
PHE
99
A
LYS
58
D
LYS
57
A
LYS
59
D
LYS
58
A
ILE
62
D
ILE
61
A
SER
63
D
SER
62
A
ALA
118
D
ALA
117
A
GLN
121
D
GLN
120
A
CYS
133
D
CYS
132
A
THR
136
D
THR
135
A
ALA
172
D
ALA
171
A
SER
176
D
SER
175
A
ALA
152
D
ALA
151
A
ILE
154
D
ILE
153
B
VAL
4
E
VAL
3
B
THR
7
E
THR
6
B
MET
19
E
MET
18
B
GLN
25
E
GLN
24
B
LEU
76
E
LEU
75
B
LEU
78
E
LEU
77
B
TYR
64
E
TYR
63
B
VAL
66
E
VAL
65
B
PHE
10
E
PHE
9
B
LYS
14
E
LYS
13
B
THR
109
E
THR
108
B
VAL
114
E
VAL
113
B
SER
87
E
SER
86
B
SER
94
E
SER
93
B
TYR
31
E
TYR
30
B
ASP
38
E
ASP
37
B
GLY
42
E
GLY
41
B
GLY
51
E
GLY
50
B
ILE
54
E
ILE
53
B
GLN
57
E
GLN
56
B
PHE
10
E
PHE
9
B
LYS
14
E
LYS
13
B
THR
109
E
THR
108
B
VAL
114
E
VAL
113
B
SER
87
E
SER
86
B
SER
94
E
SER
93
B
THR
104
E
THR
103
B
PHE
105
E
PHE
104
B
GLU
124
E
GLU
123
B
PHE
128
E
PHE
127
B
LYS
140
E
LYS
139
B
PHE
150
E
PHE
149
B
TYR
188
E
TYR
187
B
SER
197
E
SER
196
B
VAL
170
E
VAL
169
B
THR
172
E
THR
171
B
GLU
124
E
GLU
123
B
PHE
128
E
PHE
127
B
LYS
140
E
LYS
139
B
PHE
150
E
PHE
149
B
TYR
188
E
TYR
187
B
SER
197
E
SER
196
B
LEU
177
E
LEU
176
B
LYS
178
E
LYS
177
B
VAL
155
E
VAL
154
B
VAL
161
E
VAL
160
B
HIS
207
E
HIS
206
B
PHE
214
E
PHE
213
B
GLN
233
E
GLN
232
B
TRP
240
E
TRP
239
BINDING SITE FOR RESIDUE SO4 L 800
L
SO4
800
Software
2
BINDING SITE FOR RESIDUE CL A 1
A
CL
1
Software
2
H
ARG
21
A
ARG
21
2
1_555
L
HIS
51
C
HIS
52
2
1_555
A
ASN
29
D
ASN
28
2
1_555
A
ARG
92
D
ARG
91
2
1_555
4
P 1 21 1