0.011533
0.006658
0.000000
0.000000
0.013317
0.000000
0.000000
0.000000
0.008991
0.00000
0.00000
0.00000
Bagaria, A.
0000-0002-2487-9713
Burley, S.K.
Swaminathan, S.
New York SGX Research Center for Structural Genomics (NYSGXRC)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
86.710
86.710
111.224
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be Published
0353
Crystal structure of LacI family transcription regulator from Agrobacterium tumefaciens
0000-0002-2487-9713
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
Mirrors
CCD
2009-03-23
ADSC QUANTUM 315r
Si(111) channel
SINGLE WAVELENGTH
M
x-ray
1
0.9793
1.0
X29A
NSLS
0.9793
SYNCHROTRON
NSLS BEAMLINE X29A
32427.455
Transcriptional regulator, LacI family
UNP residues 62-338
1
man
polymer
18.015
water
88
nat
water
no
yes
(MSE)SLRTGKTNVIALVLSVDEEL(MSE)GFTSQ(MSE)VFGITEVLSTTQYHLVVTPHIHAKDS(MSE)VPIRYILET
GSADGVIISKIEPNDPRVRF(MSE)TERN(MSE)PFVTHGRSD(MSE)GIEHAFHDFDNEAYAYEAVERLAQCGRKRIAV
IVPPSRFSFHDHARKGFNRGIRDFGLTEFPIDAVTIETPLEKIRDFGQRL(MSE)QSSDRPDGIVSISGSSTIALVAGFE
AAGVKIGEDVDIVSKQSAEFLNWIKPQIHTVNEDIKLAGRELAKALLARINGEAAETLQSISGPVWSS(MSE)APKEGHH
HHHH
MSLRTGKTNVIALVLSVDEELMGFTSQMVFGITEVLSTTQYHLVVTPHIHAKDSMVPIRYILETGSADGVIISKIEPNDP
RVRFMTERNMPFVTHGRSDMGIEHAFHDFDNEAYAYEAVERLAQCGRKRIAVIVPPSRFSFHDHARKGFNRGIRDFGLTE
FPIDAVTIETPLEKIRDFGQRLMQSSDRPDGIVSISGSSTIALVAGFEAAGVKIGEDVDIVSKQSAEFLNWIKPQIHTVN
EDIKLAGRELAKALLARINGEAAETLQSISGPVWSSMAPKEGHHHHHH
A
NYSGXRC-11224e
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
C58
sample
33970
AGR_C_2807, Atu1522
176299
Agrobacterium tumefaciens str.
562
Escherichia coli
BL21
Plasmid
pSGX3(BC)
1
3.72
66.96
VAPOR DIFFUSION, SITTING DROP
7.5
0.1M HEPES pH 7.5, 20% PEG 10000, VAPOR DIFFUSION, SITTING DROP, temperature 298K
298
New York SGX Research Center for Structural Genomics
NYSGXRC
PSI, Protein Structure Initiative
audit_author
citation_author
struct_conn
struct_ref_seq_dif
repository
Initial release
Source and taxonomy
Version format compliance
Database references
Derived calculations
Structure summary
1
0
2009-04-14
1
1
2011-07-13
1
2
2021-02-10
_audit_author.identifier_ORCID
_citation_author.identifier_ORCID
_struct_conn.pdbx_leaving_atom_flag
_struct_ref_seq_dif.details
Y
RCSB
Y
RCSB
2009-03-30
REL
REL
HOH
water
HOH
401
2
HOH
HOH
401
A
HOH
402
2
HOH
HOH
402
A
HOH
403
2
HOH
HOH
403
A
HOH
404
2
HOH
HOH
404
A
HOH
405
2
HOH
HOH
405
A
HOH
406
2
HOH
HOH
406
A
HOH
407
2
HOH
HOH
407
A
HOH
408
2
HOH
HOH
408
A
HOH
409
2
HOH
HOH
409
A
HOH
410
2
HOH
HOH
410
A
HOH
411
2
HOH
HOH
411
A
HOH
412
2
HOH
HOH
412
A
HOH
413
2
HOH
HOH
413
A
HOH
414
2
HOH
HOH
414
A
HOH
415
2
HOH
HOH
415
A
HOH
416
2
HOH
HOH
416
A
HOH
417
2
HOH
HOH
417
A
HOH
418
2
HOH
HOH
418
A
HOH
419
2
HOH
HOH
419
A
HOH
420
2
HOH
HOH
420
A
HOH
421
2
HOH
HOH
421
A
HOH
422
2
HOH
HOH
422
A
HOH
423
2
HOH
HOH
423
A
HOH
424
2
HOH
HOH
424
A
HOH
425
2
HOH
HOH
425
A
HOH
426
2
HOH
HOH
426
A
HOH
427
2
HOH
HOH
427
A
HOH
428
2
HOH
HOH
428
A
HOH
429
2
HOH
HOH
429
A
HOH
430
2
HOH
HOH
430
A
HOH
431
2
HOH
HOH
431
A
HOH
432
2
HOH
HOH
432
A
HOH
433
2
HOH
HOH
433
A
HOH
434
2
HOH
HOH
434
A
HOH
435
2
HOH
HOH
435
A
HOH
436
2
HOH
HOH
436
A
HOH
437
2
HOH
HOH
437
A
HOH
438
2
HOH
HOH
438
A
HOH
439
2
HOH
HOH
439
A
HOH
440
2
HOH
HOH
440
A
HOH
441
2
HOH
HOH
441
A
HOH
442
2
HOH
HOH
442
A
HOH
443
2
HOH
HOH
443
A
HOH
444
2
HOH
HOH
444
A
HOH
445
2
HOH
HOH
445
A
HOH
446
2
HOH
HOH
446
A
HOH
447
2
HOH
HOH
447
A
HOH
448
2
HOH
HOH
448
A
HOH
449
2
HOH
HOH
449
A
HOH
450
2
HOH
HOH
450
A
HOH
451
2
HOH
HOH
451
A
HOH
452
2
HOH
HOH
452
A
HOH
453
2
HOH
HOH
453
A
HOH
454
2
HOH
HOH
454
A
HOH
455
2
HOH
HOH
455
A
HOH
456
2
HOH
HOH
456
A
HOH
457
2
HOH
HOH
457
A
HOH
458
2
HOH
HOH
458
A
HOH
459
2
HOH
HOH
459
A
HOH
460
2
HOH
HOH
460
A
HOH
461
2
HOH
HOH
461
A
HOH
462
2
HOH
HOH
462
A
HOH
463
2
HOH
HOH
463
A
HOH
464
2
HOH
HOH
464
A
HOH
465
2
HOH
HOH
465
A
HOH
466
2
HOH
HOH
466
A
HOH
467
2
HOH
HOH
467
A
HOH
468
2
HOH
HOH
468
A
HOH
469
2
HOH
HOH
469
A
HOH
470
2
HOH
HOH
470
A
HOH
471
2
HOH
HOH
471
A
HOH
472
2
HOH
HOH
472
A
HOH
473
2
HOH
HOH
473
A
HOH
474
2
HOH
HOH
474
A
HOH
475
2
HOH
HOH
475
A
HOH
476
2
HOH
HOH
476
A
HOH
477
2
HOH
HOH
477
A
HOH
478
2
HOH
HOH
478
A
HOH
479
2
HOH
HOH
479
A
HOH
480
2
HOH
HOH
480
A
HOH
481
2
HOH
HOH
481
A
HOH
482
2
HOH
HOH
482
A
HOH
483
2
HOH
HOH
483
A
HOH
484
2
HOH
HOH
484
A
HOH
485
2
HOH
HOH
485
A
HOH
486
2
HOH
HOH
486
A
HOH
487
2
HOH
HOH
487
A
HOH
488
2
HOH
HOH
488
A
n
1
59
A
n
2
60
A
n
3
61
A
n
4
62
A
n
5
63
A
n
6
64
A
LYS
65
n
7
LYS
65
A
THR
66
n
8
THR
66
A
ASN
67
n
9
ASN
67
A
VAL
68
n
10
VAL
68
A
ILE
69
n
11
ILE
69
A
ALA
70
n
12
ALA
70
A
LEU
71
n
13
LEU
71
A
VAL
72
n
14
VAL
72
A
LEU
73
n
15
LEU
73
A
SER
74
n
16
SER
74
A
VAL
75
n
17
VAL
75
A
ASP
76
n
18
ASP
76
A
GLU
77
n
19
GLU
77
A
GLU
78
n
20
GLU
78
A
LEU
79
n
21
LEU
79
A
MSE
80
n
22
MSE
80
A
GLY
81
n
23
GLY
81
A
PHE
82
n
24
PHE
82
A
THR
83
n
25
THR
83
A
SER
84
n
26
SER
84
A
GLN
85
n
27
GLN
85
A
MSE
86
n
28
MSE
86
A
VAL
87
n
29
VAL
87
A
PHE
88
n
30
PHE
88
A
GLY
89
n
31
GLY
89
A
ILE
90
n
32
ILE
90
A
THR
91
n
33
THR
91
A
GLU
92
n
34
GLU
92
A
VAL
93
n
35
VAL
93
A
LEU
94
n
36
LEU
94
A
SER
95
n
37
SER
95
A
THR
96
n
38
THR
96
A
THR
97
n
39
THR
97
A
GLN
98
n
40
GLN
98
A
TYR
99
n
41
TYR
99
A
HIS
100
n
42
HIS
100
A
LEU
101
n
43
LEU
101
A
VAL
102
n
44
VAL
102
A
VAL
103
n
45
VAL
103
A
THR
104
n
46
THR
104
A
PRO
105
n
47
PRO
105
A
HIS
106
n
48
HIS
106
A
ILE
107
n
49
ILE
107
A
HIS
108
n
50
HIS
108
A
ALA
109
n
51
ALA
109
A
LYS
110
n
52
LYS
110
A
ASP
111
n
53
ASP
111
A
SER
112
n
54
SER
112
A
MSE
113
n
55
MSE
113
A
VAL
114
n
56
VAL
114
A
PRO
115
n
57
PRO
115
A
ILE
116
n
58
ILE
116
A
ARG
117
n
59
ARG
117
A
TYR
118
n
60
TYR
118
A
ILE
119
n
61
ILE
119
A
LEU
120
n
62
LEU
120
A
GLU
121
n
63
GLU
121
A
THR
122
n
64
THR
122
A
GLY
123
n
65
GLY
123
A
SER
124
n
66
SER
124
A
ALA
125
n
67
ALA
125
A
ASP
126
n
68
ASP
126
A
GLY
127
n
69
GLY
127
A
VAL
128
n
70
VAL
128
A
ILE
129
n
71
ILE
129
A
ILE
130
n
72
ILE
130
A
SER
131
n
73
SER
131
A
LYS
132
n
74
LYS
132
A
ILE
133
n
75
ILE
133
A
GLU
134
n
76
GLU
134
A
PRO
135
n
77
PRO
135
A
ASN
136
n
78
ASN
136
A
ASP
137
n
79
ASP
137
A
PRO
138
n
80
PRO
138
A
ARG
139
n
81
ARG
139
A
VAL
140
n
82
VAL
140
A
ARG
141
n
83
ARG
141
A
PHE
142
n
84
PHE
142
A
MSE
143
n
85
MSE
143
A
THR
144
n
86
THR
144
A
GLU
145
n
87
GLU
145
A
ARG
146
n
88
ARG
146
A
ASN
147
n
89
ASN
147
A
MSE
148
n
90
MSE
148
A
PRO
149
n
91
PRO
149
A
PHE
150
n
92
PHE
150
A
VAL
151
n
93
VAL
151
A
THR
152
n
94
THR
152
A
HIS
153
n
95
HIS
153
A
GLY
154
n
96
GLY
154
A
ARG
155
n
97
ARG
155
A
SER
156
n
98
SER
156
A
ASP
157
n
99
ASP
157
A
MSE
158
n
100
MSE
158
A
GLY
159
n
101
GLY
159
A
ILE
160
n
102
ILE
160
A
GLU
161
n
103
GLU
161
A
HIS
162
n
104
HIS
162
A
ALA
163
n
105
ALA
163
A
PHE
164
n
106
PHE
164
A
HIS
165
n
107
HIS
165
A
ASP
166
n
108
ASP
166
A
PHE
167
n
109
PHE
167
A
ASP
168
n
110
ASP
168
A
ASN
169
n
111
ASN
169
A
GLU
170
n
112
GLU
170
A
ALA
171
n
113
ALA
171
A
TYR
172
n
114
TYR
172
A
ALA
173
n
115
ALA
173
A
TYR
174
n
116
TYR
174
A
GLU
175
n
117
GLU
175
A
ALA
176
n
118
ALA
176
A
VAL
177
n
119
VAL
177
A
GLU
178
n
120
GLU
178
A
ARG
179
n
121
ARG
179
A
LEU
180
n
122
LEU
180
A
ALA
181
n
123
ALA
181
A
GLN
182
n
124
GLN
182
A
CYS
183
n
125
CYS
183
A
GLY
184
n
126
GLY
184
A
ARG
185
n
127
ARG
185
A
LYS
186
n
128
LYS
186
A
ARG
187
n
129
ARG
187
A
ILE
188
n
130
ILE
188
A
ALA
189
n
131
ALA
189
A
VAL
190
n
132
VAL
190
A
ILE
191
n
133
ILE
191
A
VAL
192
n
134
VAL
192
A
PRO
193
n
135
PRO
193
A
PRO
194
n
136
PRO
194
A
SER
195
n
137
SER
195
A
ARG
196
n
138
ARG
196
A
PHE
197
n
139
PHE
197
A
SER
198
n
140
SER
198
A
PHE
199
n
141
PHE
199
A
HIS
200
n
142
HIS
200
A
ASP
201
n
143
ASP
201
A
HIS
202
n
144
HIS
202
A
ALA
203
n
145
ALA
203
A
ARG
204
n
146
ARG
204
A
LYS
205
n
147
LYS
205
A
GLY
206
n
148
GLY
206
A
PHE
207
n
149
PHE
207
A
ASN
208
n
150
ASN
208
A
ARG
209
n
151
ARG
209
A
GLY
210
n
152
GLY
210
A
ILE
211
n
153
ILE
211
A
ARG
212
n
154
ARG
212
A
ASP
213
n
155
ASP
213
A
PHE
214
n
156
PHE
214
A
GLY
215
n
157
GLY
215
A
LEU
216
n
158
LEU
216
A
THR
217
n
159
THR
217
A
GLU
218
n
160
GLU
218
A
PHE
219
n
161
PHE
219
A
PRO
220
n
162
PRO
220
A
ILE
221
n
163
ILE
221
A
ASP
222
n
164
ASP
222
A
ALA
223
n
165
ALA
223
A
VAL
224
n
166
VAL
224
A
THR
225
n
167
THR
225
A
ILE
226
n
168
ILE
226
A
GLU
227
n
169
GLU
227
A
THR
228
n
170
THR
228
A
PRO
229
n
171
PRO
229
A
LEU
230
n
172
LEU
230
A
GLU
231
n
173
GLU
231
A
LYS
232
n
174
LYS
232
A
ILE
233
n
175
ILE
233
A
ARG
234
n
176
ARG
234
A
ASP
235
n
177
ASP
235
A
PHE
236
n
178
PHE
236
A
GLY
237
n
179
GLY
237
A
GLN
238
n
180
GLN
238
A
ARG
239
n
181
ARG
239
A
LEU
240
n
182
LEU
240
A
MSE
241
n
183
MSE
241
A
GLN
242
n
184
GLN
242
A
SER
243
n
185
SER
243
A
SER
244
n
186
SER
244
A
ASP
245
n
187
ASP
245
A
ARG
246
n
188
ARG
246
A
PRO
247
n
189
PRO
247
A
ASP
248
n
190
ASP
248
A
GLY
249
n
191
GLY
249
A
ILE
250
n
192
ILE
250
A
VAL
251
n
193
VAL
251
A
SER
252
n
194
SER
252
A
ILE
253
n
195
ILE
253
A
SER
254
n
196
SER
254
A
GLY
255
n
197
GLY
255
A
SER
256
n
198
SER
256
A
SER
257
n
199
SER
257
A
THR
258
n
200
THR
258
A
ILE
259
n
201
ILE
259
A
ALA
260
n
202
ALA
260
A
LEU
261
n
203
LEU
261
A
VAL
262
n
204
VAL
262
A
ALA
263
n
205
ALA
263
A
GLY
264
n
206
GLY
264
A
PHE
265
n
207
PHE
265
A
GLU
266
n
208
GLU
266
A
ALA
267
n
209
ALA
267
A
ALA
268
n
210
ALA
268
A
GLY
269
n
211
GLY
269
A
VAL
270
n
212
VAL
270
A
LYS
271
n
213
LYS
271
A
ILE
272
n
214
ILE
272
A
GLY
273
n
215
GLY
273
A
GLU
274
n
216
GLU
274
A
ASP
275
n
217
ASP
275
A
VAL
276
n
218
VAL
276
A
ASP
277
n
219
ASP
277
A
ILE
278
n
220
ILE
278
A
VAL
279
n
221
VAL
279
A
SER
280
n
222
SER
280
A
LYS
281
n
223
LYS
281
A
GLN
282
n
224
GLN
282
A
SER
283
n
225
SER
283
A
ALA
284
n
226
ALA
284
A
GLU
285
n
227
GLU
285
A
PHE
286
n
228
PHE
286
A
LEU
287
n
229
LEU
287
A
ASN
288
n
230
ASN
288
A
TRP
289
n
231
TRP
289
A
ILE
290
n
232
ILE
290
A
LYS
291
n
233
LYS
291
A
PRO
292
n
234
PRO
292
A
GLN
293
n
235
GLN
293
A
ILE
294
n
236
ILE
294
A
HIS
295
n
237
HIS
295
A
THR
296
n
238
THR
296
A
VAL
297
n
239
VAL
297
A
ASN
298
n
240
ASN
298
A
GLU
299
n
241
GLU
299
A
ASP
300
n
242
ASP
300
A
ILE
301
n
243
ILE
301
A
LYS
302
n
244
LYS
302
A
LEU
303
n
245
LEU
303
A
ALA
304
n
246
ALA
304
A
GLY
305
n
247
GLY
305
A
ARG
306
n
248
ARG
306
A
GLU
307
n
249
GLU
307
A
LEU
308
n
250
LEU
308
A
ALA
309
n
251
ALA
309
A
LYS
310
n
252
LYS
310
A
ALA
311
n
253
ALA
311
A
LEU
312
n
254
LEU
312
A
LEU
313
n
255
LEU
313
A
ALA
314
n
256
ALA
314
A
ARG
315
n
257
ARG
315
A
ILE
316
n
258
ILE
316
A
ASN
317
n
259
ASN
317
A
GLY
318
n
260
GLY
318
A
GLU
319
n
261
GLU
319
A
ALA
320
n
262
ALA
320
A
ALA
321
n
263
ALA
321
A
GLU
322
n
264
GLU
322
A
THR
323
n
265
THR
323
A
LEU
324
n
266
LEU
324
A
GLN
325
n
267
GLN
325
A
SER
326
n
268
SER
326
A
ILE
327
n
269
ILE
327
A
SER
328
n
270
SER
328
A
GLY
329
n
271
GLY
329
A
PRO
330
n
272
PRO
330
A
VAL
331
n
273
VAL
331
A
TRP
332
n
274
TRP
332
A
SER
333
n
275
SER
333
A
n
276
334
A
n
277
335
A
n
278
336
A
n
279
337
A
n
280
338
A
n
281
339
A
n
282
340
A
n
283
341
A
n
284
342
A
n
285
343
A
n
286
344
A
n
287
345
A
n
288
346
A
author_and_software_defined_assembly
PISA
1
monomeric
software_defined_assembly
PISA
2
dimeric
2630
-27.9
21300
A
MSE
80
SELENOMETHIONINE
A
MSE
22
MET
A
MSE
86
SELENOMETHIONINE
A
MSE
28
MET
A
MSE
113
SELENOMETHIONINE
A
MSE
55
MET
A
MSE
143
SELENOMETHIONINE
A
MSE
85
MET
A
MSE
148
SELENOMETHIONINE
A
MSE
90
MET
A
MSE
158
SELENOMETHIONINE
A
MSE
100
MET
A
MSE
241
SELENOMETHIONINE
A
MSE
183
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
0.8660254038
0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_555
y,x,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
A
O
VAL
102
A
O
VAL
44
A
N
LEU
71
A
N
LEU
13
A
N
ALA
70
A
N
ALA
12
A
O
ILE
129
A
O
ILE
71
A
N
ILE
130
A
N
ILE
72
A
O
HIS
153
A
O
HIS
95
A
N
THR
152
A
N
THR
94
A
O
HIS
165
A
O
HIS
107
A
N
ASP
166
A
N
ASP
108
A
O
SER
328
A
O
SER
270
A
O
THR
217
A
O
THR
159
A
N
ILE
188
A
N
ILE
130
A
N
ALA
189
A
N
ALA
131
A
O
VAL
251
A
O
VAL
193
A
N
ILE
250
A
N
ILE
192
A
O
VAL
279
A
O
VAL
221
A
N
ILE
278
A
N
ILE
220
A
O
HIS
295
A
O
HIS
237
A
N
ASN
298
A
N
ASN
240
A
O
VAL
331
A
O
VAL
273
1
A
HOH
441
B
HOH
1
A
MSE
59
A
MSE
1
1
Y
1
A
SER
60
A
SER
2
1
Y
1
A
LEU
61
A
LEU
3
1
Y
1
A
ARG
62
A
ARG
4
1
Y
1
A
THR
63
A
THR
5
1
Y
1
A
GLY
64
A
GLY
6
1
Y
1
A
SER
334
A
SER
276
1
Y
1
A
MSE
335
A
MSE
277
1
Y
1
A
ALA
336
A
ALA
278
1
Y
1
A
PRO
337
A
PRO
279
1
Y
1
A
LYS
338
A
LYS
280
1
Y
1
A
GLU
339
A
GLU
281
1
Y
1
A
GLY
340
A
GLY
282
1
Y
1
A
HIS
341
A
HIS
283
1
Y
1
A
HIS
342
A
HIS
284
1
Y
1
A
HIS
343
A
HIS
285
1
Y
1
A
HIS
344
A
HIS
286
1
Y
1
A
HIS
345
A
HIS
287
1
Y
1
A
HIS
346
A
HIS
288
1
Y
1
A
A
OE2
NZ
GLU
LYS
266
291
0.84
1
A
A
CB
O
LEU
HOH
73
483
1.62
1
A
A
O
OG1
LEU
THR
94
97
1.95
1
A
A
CD1
CZ
ILE
PHE
259
286
1.96
1
A
A
NE2
O
GLN
ALA
238
267
2.00
1
A
A
CE
CE2
MSE
PHE
80
286
2.05
1
A
A
CD
NZ
GLU
LYS
266
291
2.06
1
A
A
O
O
VAL
HOH
72
471
2.07
1
A
A
OE1
O
GLU
HOH
319
414
2.16
1
A
MSE
158
-146.40
11.59
1
A
GLU
285
-68.94
6.94
46.203
0.00
0.00
0.00
0.00
0.00
0.00
0.948
0.916
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. Residues listed as missing in Remark 465 are due to lack of electron density. Residues with missing atoms listed in Remark 470 are due to lack of electron density for side chains and modeled as alanines.
0.25450
0.19830
0.20113
2.35
43.36
1056
19542
5.1
99.74
5.991
0.145
RANDOM
1
THROUGHOUT
SAD
0.213
0.204
0.80
0.80
1.20
MAXIMUM LIKELIHOOD
MASK
2.35
43.36
88
2185
0
0
2097
0.025
0.022
2139
1.992
1.948
2895
7.970
5.000
268
33.153
23.571
98
16.439
15.000
367
19.273
15.000
17
0.154
0.200
329
0.010
0.020
1613
0.230
0.200
971
0.314
0.200
1450
0.201
0.200
104
0.268
0.200
41
0.157
0.200
4
1.506
1.500
1383
2.385
2.000
2167
3.719
3.000
849
5.301
4.500
728
0.372
0.245
2.411
72
1384
20
97.20
52.69
2.35
43.36
3GV0
20658
20658
0
0.124
1
15.8
18.9
99.8
0.423
2.35
2.43
4.8
1
9.8
97.6
data collection
CBASS
phasing
SHELXD
phasing
SHARP
refinement
REFMAC
5.2.0019
data reduction
HKL-2000
data scaling
HKL-2000
Transcriptional regulator, LacI family
Crystal structure of LacI family transcription regulator from Agrobacterium tumefaciens
1
N
N
2
N
N
A
GLY
81
A
GLY
23
HELX_P
A
SER
95
A
SER
37
1
1
15
A
HIS
108
A
HIS
50
HELX_P
A
SER
112
A
SER
54
5
2
5
A
MSE
113
A
MSE
55
HELX_P
A
GLY
123
A
GLY
65
1
3
11
A
ASP
137
A
ASP
79
HELX_P
A
ARG
146
A
ARG
88
1
4
10
A
ASP
168
A
ASP
110
HELX_P
A
CYS
183
A
CYS
125
1
5
16
A
PHE
197
A
PHE
139
HELX_P
A
PHE
214
A
PHE
156
1
6
18
A
PRO
229
A
PRO
171
HELX_P
A
MSE
241
A
MSE
183
1
7
13
A
SER
254
A
SER
196
HELX_P
A
ALA
267
A
ALA
209
1
8
14
A
PHE
286
A
PHE
228
HELX_P
A
LYS
291
A
LYS
233
1
9
6
A
ASP
300
A
ASP
242
HELX_P
A
ASN
317
A
ASN
259
1
10
18
A
ALA
320
A
ALA
262
HELX_P
A
THR
323
A
THR
265
5
11
4
covale
1.311
both
A
LEU
79
A
C
LEU
21
1_555
A
MSE
80
A
N
MSE
22
1_555
covale
1.309
both
A
MSE
80
A
C
MSE
22
1_555
A
GLY
81
A
N
GLY
23
1_555
covale
1.303
both
A
GLN
85
A
C
GLN
27
1_555
A
MSE
86
A
N
MSE
28
1_555
covale
1.310
both
A
MSE
86
A
C
MSE
28
1_555
A
VAL
87
A
N
VAL
29
1_555
covale
1.319
both
A
SER
112
A
C
SER
54
1_555
A
MSE
113
A
N
MSE
55
1_555
covale
1.313
both
A
MSE
113
A
C
MSE
55
1_555
A
VAL
114
A
N
VAL
56
1_555
covale
1.315
both
A
PHE
142
A
C
PHE
84
1_555
A
MSE
143
A
N
MSE
85
1_555
covale
1.311
both
A
MSE
143
A
C
MSE
85
1_555
A
THR
144
A
N
THR
86
1_555
covale
1.318
both
A
ASN
147
A
C
ASN
89
1_555
A
MSE
148
A
N
MSE
90
1_555
covale
1.313
both
A
MSE
148
A
C
MSE
90
1_555
A
PRO
149
A
N
PRO
91
1_555
covale
1.317
both
A
ASP
157
A
C
ASP
99
1_555
A
MSE
158
A
N
MSE
100
1_555
covale
1.313
both
A
MSE
158
A
C
MSE
100
1_555
A
GLY
159
A
N
GLY
101
1_555
covale
1.311
both
A
LEU
240
A
C
LEU
182
1_555
A
MSE
241
A
N
MSE
183
1_555
covale
1.316
both
A
MSE
241
A
C
MSE
183
1_555
A
GLN
242
A
N
GLN
184
1_555
TRANSCRIPTION REGULATOR
Transcription regulator, PSI-II, 11224e, Structural Genomics, Protein Structure Initiative, New York SGX Research Center for Structural Genomics, NYSGXRC, New York Structural GenomiX Research Consortium, DNA-binding, Transcription, Transcription regulation
Q7CZ24_AGRT5
UNP
1
62
Q7CZ24
RTGKTNVIALVLSVDEELMGFTSQMVFGITEVLSTTQYHLVVTPHIHAKDSMVPIRYILETGSADGVIISKIEPNDPRVR
FMTERNMPFVTHGRSDMGIEHAFHDFDNEAYAYEAVERLAQCGRKRIAVIVPPSRFSFHDHARKGFNRGIRDFGLTEFPI
DAVTIETPLEKIRDFGQRLMQSSDRPDGIVSISGSSTIALVAGFEAAGVKIGEDVDIVSKQSAEFLNWIKPQIHTVNEDI
KLAGRELAKALLARINGEAAETLQSISGPVWSSMAPK
62
338
3GV0
62
338
Q7CZ24
A
1
4
280
1
expression tag
MSE
59
3GV0
A
Q7CZ24
UNP
1
1
expression tag
SER
60
3GV0
A
Q7CZ24
UNP
2
1
expression tag
LEU
61
3GV0
A
Q7CZ24
UNP
3
1
expression tag
GLU
339
3GV0
A
Q7CZ24
UNP
281
1
expression tag
GLY
340
3GV0
A
Q7CZ24
UNP
282
1
expression tag
HIS
341
3GV0
A
Q7CZ24
UNP
283
1
expression tag
HIS
342
3GV0
A
Q7CZ24
UNP
284
1
expression tag
HIS
343
3GV0
A
Q7CZ24
UNP
285
1
expression tag
HIS
344
3GV0
A
Q7CZ24
UNP
286
1
expression tag
HIS
345
3GV0
A
Q7CZ24
UNP
287
1
expression tag
HIS
346
3GV0
A
Q7CZ24
UNP
288
6
6
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
A
HIS
100
A
HIS
42
A
VAL
103
A
VAL
45
A
VAL
68
A
VAL
10
A
VAL
72
A
VAL
14
A
GLY
127
A
GLY
69
A
SER
131
A
SER
73
A
PHE
150
A
PHE
92
A
HIS
153
A
HIS
95
A
ALA
163
A
ALA
105
A
PHE
167
A
PHE
109
A
GLN
325
A
GLN
267
A
SER
328
A
SER
270
A
THR
217
A
THR
159
A
GLU
218
A
GLU
160
A
ARG
187
A
ARG
129
A
ILE
191
A
ILE
133
A
GLY
249
A
GLY
191
A
SER
252
A
SER
194
A
ASP
277
A
ASP
219
A
GLN
282
A
GLN
224
A
HIS
295
A
HIS
237
A
ASN
298
A
ASN
240
A
VAL
331
A
VAL
273
A
TRP
332
A
TRP
274
154
P 32 2 1