0.026823
0.000000
0.001235
0.000000
0.010772
0.000000
0.000000
0.000000
0.023366
0.00000
0.00000
0.00000
Han, S.
Mistry, A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.00
92.64
90.00
37.281
92.830
42.843
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C19 H25 F3 N6 O2 S
458.501
4-{[4-{[(1R,2R)-2-(dimethylamino)cyclopentyl]amino}-5-(trifluoromethyl)pyrimidin-2-yl]amino}-N-methylbenzenesulfonamide
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
Y
250
N
C
Y
251
N
C
Y
252
N
C
Y
253
N
C
N
254
N
F
N
255
N
C
N
256
N
F
N
257
N
F
Y
258
N
C
Y
259
N
N
Y
260
N
C
N
261
N
N
N
262
R
C
N
263
N
C
N
264
N
C
N
265
N
C
N
266
R
C
N
267
N
N
N
268
N
C
N
269
N
C
Y
270
N
N
N
271
N
N
Y
272
N
C
Y
273
N
C
Y
274
N
C
Y
275
N
C
N
276
N
S
N
277
N
O
N
278
N
O
N
279
N
N
N
280
N
C
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
N
N
307
S
C
N
308
N
C
N
309
N
O
N
310
N
C
Y
311
N
C
Y
312
N
C
Y
313
N
C
Y
314
N
C
Y
315
N
C
Y
316
N
C
N
317
N
O
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
N
N
330
S
C
N
331
N
C
N
332
N
O
N
333
N
C
N
334
N
C
N
335
N
C
N
336
N
O
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
N
N
347
S
C
N
348
N
C
N
349
N
O
N
350
N
C
N
351
N
O
N
352
N
O
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
S
N
361
N
O
N
362
N
O
N
363
N
O
N
364
N
O
N
365
N
N
N
366
S
C
N
367
N
C
N
368
N
O
N
369
R
C
N
370
N
O
N
371
N
C
N
372
N
O
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
N
N
383
S
C
N
384
N
C
N
385
N
O
N
386
N
C
Y
387
N
C
Y
388
N
C
Y
389
N
C
Y
390
N
N
Y
391
N
C
Y
392
N
C
Y
393
N
C
Y
394
N
C
Y
395
N
C
N
396
N
O
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
N
N
410
S
C
N
411
N
C
N
412
N
O
N
413
N
C
Y
414
N
C
Y
415
N
C
Y
416
N
C
Y
417
N
C
Y
418
N
C
Y
419
N
C
N
420
N
O
N
421
N
O
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
N
N
434
S
C
N
435
N
C
N
436
N
O
N
437
N
C
N
438
N
C
N
439
N
C
N
440
N
O
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
Y
238
N
doub
Y
239
N
sing
Y
240
N
sing
Y
241
N
doub
Y
242
N
doub
Y
243
N
sing
N
244
N
sing
Y
245
N
doub
Y
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
Y
251
N
sing
N
252
N
sing
Y
253
N
doub
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
Y
263
N
doub
Y
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
doub
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
doub
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
Y
306
N
doub
Y
307
N
sing
Y
308
N
sing
N
309
N
sing
Y
310
N
doub
N
311
N
sing
Y
312
N
doub
N
313
N
sing
Y
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
doub
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
doub
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
doub
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
doub
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
doub
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
Y
379
N
doub
Y
380
N
sing
Y
381
N
sing
N
382
N
sing
Y
383
N
doub
Y
384
N
sing
Y
385
N
sing
N
386
N
sing
Y
387
N
sing
Y
388
N
doub
N
389
N
sing
Y
390
N
doub
N
391
N
sing
Y
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
doub
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
Y
407
N
doub
Y
408
N
sing
Y
409
N
sing
N
410
N
sing
Y
411
N
doub
N
412
N
sing
Y
413
N
doub
N
414
N
sing
Y
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
doub
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
UK
Bioorg.Med.Chem.Lett.
BMCLE8
1127
0960-894X
19
3253
3258
10.1016/j.bmcl.2009.04.093
19428251
Sulfoximine-substituted trifluoromethylpyrimidine analogs as inhibitors of proline-rich tyrosine kinase 2 (PYK2) show reduced hERG activity.
2009
10.2210/pdb3h3c/pdb
pdb_00003h3c
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
IMAGE PLATE
2005-11-20
RIGAKU RAXIS IV++
SINGLE WAVELENGTH
M
x-ray
1
1.542
1.0
1.542
ROTATING ANODE
RIGAKU RU200
32190.320
Protein tyrosine kinase 2 beta
2.7.10.2
1
man
polymer
96.063
SULFATE ION
5
syn
non-polymer
458.501
4-{[4-{[(1R,2R)-2-(dimethylamino)cyclopentyl]amino}-5-(trifluoromethyl)pyrimidin-2-yl]amino}-N-methylbenzenesulfonamide
1
syn
non-polymer
18.015
water
29
nat
water
Focal adhesion kinase 2, FADK 2, Proline-rich tyrosine kinase 2, Cell adhesion kinase beta, CAK beta, Calcium-dependent tyrosine kinase, CADTK, Related adhesion focal tyrosine kinase, RAFTK
no
no
PQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE
EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIE
DEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLY
TLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIAME
PQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE
EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIE
DEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLY
TLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIAME
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
PTK2B, FAK2, PYK2, RAFTK
9606
Homo sapiens
10469
unidentified baculovirus
1
2.30
46.54
VAPOR DIFFUSION, HANGING DROP
7.0
0.2M MgCl2, 20-27% PEG3350, 1mM TCEP, 0.1M bis-Tris, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K
295
chem_comp_atom
chem_comp_bond
database_2
struct_site
repository
Initial release
Version format compliance
Data collection
Database references
Derived calculations
1
0
2009-05-26
1
1
2011-07-13
1
2
2024-02-21
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2009-04-16
REL
REL
SO4
SULFATE ION
P1E
4-{[4-{[(1R,2R)-2-(dimethylamino)cyclopentyl]amino}-5-(trifluoromethyl)pyrimidin-2-yl]amino}-N-methylbenzenesulfonamide
HOH
water
SO4
1
2
SO4
SO4
1
A
SO4
2
2
SO4
SO4
2
A
SO4
3
2
SO4
SO4
3
A
SO4
4
2
SO4
SO4
4
A
SO4
5
2
SO4
SO4
5
A
P1E
999
3
P1E
P1E
999
A
HOH
6
4
HOH
HOH
6
A
HOH
7
4
HOH
HOH
7
A
HOH
8
4
HOH
HOH
8
A
HOH
9
4
HOH
HOH
9
A
HOH
10
4
HOH
HOH
10
A
HOH
11
4
HOH
HOH
11
A
HOH
12
4
HOH
HOH
12
A
HOH
13
4
HOH
HOH
13
A
HOH
14
4
HOH
HOH
14
A
HOH
15
4
HOH
HOH
15
A
HOH
16
4
HOH
HOH
16
A
HOH
17
4
HOH
HOH
17
A
HOH
18
4
HOH
HOH
18
A
HOH
19
4
HOH
HOH
19
A
HOH
20
4
HOH
HOH
20
A
HOH
21
4
HOH
HOH
21
A
HOH
22
4
HOH
HOH
22
A
HOH
23
4
HOH
HOH
23
A
HOH
24
4
HOH
HOH
24
A
HOH
25
4
HOH
HOH
25
A
HOH
26
4
HOH
HOH
26
A
HOH
27
4
HOH
HOH
27
A
HOH
28
4
HOH
HOH
28
A
HOH
29
4
HOH
HOH
29
A
HOH
1
4
HOH
HOH
693
A
HOH
2
4
HOH
HOH
694
A
HOH
3
4
HOH
HOH
695
A
HOH
4
4
HOH
HOH
696
A
HOH
5
4
HOH
HOH
697
A
PRO
416
n
1
PRO
416
A
GLN
417
n
2
GLN
417
A
TYR
418
n
3
TYR
418
A
GLY
419
n
4
GLY
419
A
ILE
420
n
5
ILE
420
A
ALA
421
n
6
ALA
421
A
ARG
422
n
7
ARG
422
A
GLU
423
n
8
GLU
423
A
ASP
424
n
9
ASP
424
A
VAL
425
n
10
VAL
425
A
VAL
426
n
11
VAL
426
A
LEU
427
n
12
LEU
427
A
ASN
428
n
13
ASN
428
A
ARG
429
n
14
ARG
429
A
ILE
430
n
15
ILE
430
A
LEU
431
n
16
LEU
431
A
GLY
432
n
17
GLY
432
A
GLU
433
n
18
GLU
433
A
GLY
434
n
19
GLY
434
A
PHE
435
n
20
PHE
435
A
PHE
436
n
21
PHE
436
A
GLY
437
n
22
GLY
437
A
GLU
438
n
23
GLU
438
A
VAL
439
n
24
VAL
439
A
TYR
440
n
25
TYR
440
A
GLU
441
n
26
GLU
441
A
GLY
442
n
27
GLY
442
A
VAL
443
n
28
VAL
443
A
TYR
444
n
29
TYR
444
A
THR
445
n
30
THR
445
A
ASN
446
n
31
ASN
446
A
HIS
447
n
32
HIS
447
A
LYS
448
n
33
LYS
448
A
GLY
449
n
34
GLY
449
A
GLU
450
n
35
GLU
450
A
LYS
451
n
36
LYS
451
A
ILE
452
n
37
ILE
452
A
ASN
453
n
38
ASN
453
A
VAL
454
n
39
VAL
454
A
ALA
455
n
40
ALA
455
A
VAL
456
n
41
VAL
456
A
LYS
457
n
42
LYS
457
A
THR
458
n
43
THR
458
A
CYS
459
n
44
CYS
459
A
LYS
460
n
45
LYS
460
A
LYS
461
n
46
LYS
461
A
ASP
462
n
47
ASP
462
A
CYS
463
n
48
CYS
463
A
THR
464
n
49
THR
464
A
LEU
465
n
50
LEU
465
A
ASP
466
n
51
ASP
466
A
ASN
467
n
52
ASN
467
A
LYS
468
n
53
LYS
468
A
GLU
469
n
54
GLU
469
A
LYS
470
n
55
LYS
470
A
PHE
471
n
56
PHE
471
A
MET
472
n
57
MET
472
A
SER
473
n
58
SER
473
A
GLU
474
n
59
GLU
474
A
ALA
475
n
60
ALA
475
A
VAL
476
n
61
VAL
476
A
ILE
477
n
62
ILE
477
A
MET
478
n
63
MET
478
A
LYS
479
n
64
LYS
479
A
ASN
480
n
65
ASN
480
A
LEU
481
n
66
LEU
481
A
ASP
482
n
67
ASP
482
A
HIS
483
n
68
HIS
483
A
PRO
484
n
69
PRO
484
A
HIS
485
n
70
HIS
485
A
ILE
486
n
71
ILE
486
A
VAL
487
n
72
VAL
487
A
LYS
488
n
73
LYS
488
A
LEU
489
n
74
LEU
489
A
ILE
490
n
75
ILE
490
A
GLY
491
n
76
GLY
491
A
ILE
492
n
77
ILE
492
A
ILE
493
n
78
ILE
493
A
GLU
494
n
79
GLU
494
A
GLU
495
n
80
GLU
495
A
GLU
496
n
81
GLU
496
A
PRO
497
n
82
PRO
497
A
THR
498
n
83
THR
498
A
TRP
499
n
84
TRP
499
A
ILE
500
n
85
ILE
500
A
ILE
501
n
86
ILE
501
A
MET
502
n
87
MET
502
A
GLU
503
n
88
GLU
503
A
LEU
504
n
89
LEU
504
A
TYR
505
n
90
TYR
505
A
PRO
506
n
91
PRO
506
A
TYR
507
n
92
TYR
507
A
GLY
508
n
93
GLY
508
A
GLU
509
n
94
GLU
509
A
LEU
510
n
95
LEU
510
A
GLY
511
n
96
GLY
511
A
HIS
512
n
97
HIS
512
A
TYR
513
n
98
TYR
513
A
LEU
514
n
99
LEU
514
A
GLU
515
n
100
GLU
515
A
ARG
516
n
101
ARG
516
A
ASN
517
n
102
ASN
517
A
LYS
518
n
103
LYS
518
A
ASN
519
n
104
ASN
519
A
SER
520
n
105
SER
520
A
LEU
521
n
106
LEU
521
A
LYS
522
n
107
LYS
522
A
VAL
523
n
108
VAL
523
A
LEU
524
n
109
LEU
524
A
THR
525
n
110
THR
525
A
LEU
526
n
111
LEU
526
A
VAL
527
n
112
VAL
527
A
LEU
528
n
113
LEU
528
A
TYR
529
n
114
TYR
529
A
SER
530
n
115
SER
530
A
LEU
531
n
116
LEU
531
A
GLN
532
n
117
GLN
532
A
ILE
533
n
118
ILE
533
A
CYS
534
n
119
CYS
534
A
LYS
535
n
120
LYS
535
A
ALA
536
n
121
ALA
536
A
MET
537
n
122
MET
537
A
ALA
538
n
123
ALA
538
A
TYR
539
n
124
TYR
539
A
LEU
540
n
125
LEU
540
A
GLU
541
n
126
GLU
541
A
SER
542
n
127
SER
542
A
ILE
543
n
128
ILE
543
A
ASN
544
n
129
ASN
544
A
CYS
545
n
130
CYS
545
A
VAL
546
n
131
VAL
546
A
HIS
547
n
132
HIS
547
A
ARG
548
n
133
ARG
548
A
ASP
549
n
134
ASP
549
A
ILE
550
n
135
ILE
550
A
ALA
551
n
136
ALA
551
A
VAL
552
n
137
VAL
552
A
ARG
553
n
138
ARG
553
A
ASN
554
n
139
ASN
554
A
ILE
555
n
140
ILE
555
A
LEU
556
n
141
LEU
556
A
VAL
557
n
142
VAL
557
A
ALA
558
n
143
ALA
558
A
SER
559
n
144
SER
559
A
PRO
560
n
145
PRO
560
A
GLU
561
n
146
GLU
561
A
CYS
562
n
147
CYS
562
A
VAL
563
n
148
VAL
563
A
LYS
564
n
149
LYS
564
A
LEU
565
n
150
LEU
565
A
GLY
566
n
151
GLY
566
A
ASP
567
n
152
ASP
567
A
PHE
568
n
153
PHE
568
A
GLY
569
n
154
GLY
569
A
LEU
570
n
155
LEU
570
A
n
156
571
A
n
157
572
A
n
158
573
A
n
159
574
A
n
160
575
A
n
161
576
A
n
162
577
A
n
163
578
A
n
164
579
A
n
165
580
A
n
166
581
A
n
167
582
A
n
168
583
A
n
169
584
A
THR
585
n
170
THR
585
A
ARG
586
n
171
ARG
586
A
LEU
587
n
172
LEU
587
A
PRO
588
n
173
PRO
588
A
ILE
589
n
174
ILE
589
A
LYS
590
n
175
LYS
590
A
TRP
591
n
176
TRP
591
A
MET
592
n
177
MET
592
A
SER
593
n
178
SER
593
A
PRO
594
n
179
PRO
594
A
GLU
595
n
180
GLU
595
A
SER
596
n
181
SER
596
A
ILE
597
n
182
ILE
597
A
ASN
598
n
183
ASN
598
A
PHE
599
n
184
PHE
599
A
ARG
600
n
185
ARG
600
A
ARG
601
n
186
ARG
601
A
PHE
602
n
187
PHE
602
A
THR
603
n
188
THR
603
A
THR
604
n
189
THR
604
A
ALA
605
n
190
ALA
605
A
SER
606
n
191
SER
606
A
ASP
607
n
192
ASP
607
A
VAL
608
n
193
VAL
608
A
TRP
609
n
194
TRP
609
A
MET
610
n
195
MET
610
A
PHE
611
n
196
PHE
611
A
ALA
612
n
197
ALA
612
A
VAL
613
n
198
VAL
613
A
CYS
614
n
199
CYS
614
A
MET
615
n
200
MET
615
A
TRP
616
n
201
TRP
616
A
GLU
617
n
202
GLU
617
A
ILE
618
n
203
ILE
618
A
LEU
619
n
204
LEU
619
A
SER
620
n
205
SER
620
A
PHE
621
n
206
PHE
621
A
GLY
622
n
207
GLY
622
A
LYS
623
n
208
LYS
623
A
GLN
624
n
209
GLN
624
A
PRO
625
n
210
PRO
625
A
PHE
626
n
211
PHE
626
A
PHE
627
n
212
PHE
627
A
TRP
628
n
213
TRP
628
A
LEU
629
n
214
LEU
629
A
GLU
630
n
215
GLU
630
A
ASN
631
n
216
ASN
631
A
LYS
632
n
217
LYS
632
A
ASP
633
n
218
ASP
633
A
VAL
634
n
219
VAL
634
A
ILE
635
n
220
ILE
635
A
GLY
636
n
221
GLY
636
A
VAL
637
n
222
VAL
637
A
LEU
638
n
223
LEU
638
A
GLU
639
n
224
GLU
639
A
LYS
640
n
225
LYS
640
A
GLY
641
n
226
GLY
641
A
ASP
642
n
227
ASP
642
A
ARG
643
n
228
ARG
643
A
LEU
644
n
229
LEU
644
A
PRO
645
n
230
PRO
645
A
LYS
646
n
231
LYS
646
A
PRO
647
n
232
PRO
647
A
ASP
648
n
233
ASP
648
A
LEU
649
n
234
LEU
649
A
CYS
650
n
235
CYS
650
A
PRO
651
n
236
PRO
651
A
PRO
652
n
237
PRO
652
A
VAL
653
n
238
VAL
653
A
LEU
654
n
239
LEU
654
A
TYR
655
n
240
TYR
655
A
THR
656
n
241
THR
656
A
LEU
657
n
242
LEU
657
A
MET
658
n
243
MET
658
A
THR
659
n
244
THR
659
A
ARG
660
n
245
ARG
660
A
CYS
661
n
246
CYS
661
A
TRP
662
n
247
TRP
662
A
ASP
663
n
248
ASP
663
A
TYR
664
n
249
TYR
664
A
ASP
665
n
250
ASP
665
A
PRO
666
n
251
PRO
666
A
SER
667
n
252
SER
667
A
ASP
668
n
253
ASP
668
A
ARG
669
n
254
ARG
669
A
PRO
670
n
255
PRO
670
A
ARG
671
n
256
ARG
671
A
PHE
672
n
257
PHE
672
A
THR
673
n
258
THR
673
A
GLU
674
n
259
GLU
674
A
LEU
675
n
260
LEU
675
A
VAL
676
n
261
VAL
676
A
CYS
677
n
262
CYS
677
A
SER
678
n
263
SER
678
A
LEU
679
n
264
LEU
679
A
SER
680
n
265
SER
680
A
ASP
681
n
266
ASP
681
A
VAL
682
n
267
VAL
682
A
TYR
683
n
268
TYR
683
A
GLN
684
n
269
GLN
684
A
MET
685
n
270
MET
685
A
GLU
686
n
271
GLU
686
A
LYS
687
n
272
LYS
687
A
ASP
688
n
273
ASP
688
A
ILE
689
n
274
ILE
689
A
ALA
690
n
275
ALA
690
A
MET
691
n
276
MET
691
A
GLU
692
n
277
GLU
692
A
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ARG
429
A
N
ARG
14
A
O
GLU
441
A
O
GLU
26
A
N
TYR
444
A
N
TYR
29
A
O
ILE
452
A
O
ILE
37
A
N
LYS
457
A
N
LYS
42
A
O
ILE
500
A
O
ILE
85
A
O
TRP
499
A
O
TRP
84
A
N
ILE
493
A
N
ILE
78
A
N
LEU
556
A
N
LEU
141
A
O
LYS
564
A
O
LYS
149
1
A
SER
571
A
SER
156
1
Y
1
A
ARG
572
A
ARG
157
1
Y
1
A
TYR
573
A
TYR
158
1
Y
1
A
ILE
574
A
ILE
159
1
Y
1
A
GLU
575
A
GLU
160
1
Y
1
A
ASP
576
A
ASP
161
1
Y
1
A
GLU
577
A
GLU
162
1
Y
1
A
ASP
578
A
ASP
163
1
Y
1
A
TYR
579
A
TYR
164
1
Y
1
A
TYR
580
A
TYR
165
1
Y
1
A
LYS
581
A
LYS
166
1
Y
1
A
ALA
582
A
ALA
167
1
Y
1
A
SER
583
A
SER
168
1
Y
1
A
VAL
584
A
VAL
169
1
Y
1
6.66
0.90
118.30
124.96
A
A
A
CB
CG
OD2
ASP
ASP
ASP
462
462
462
N
1
7.28
0.90
118.30
125.58
A
A
A
CB
CG
OD2
ASP
ASP
ASP
663
663
663
N
1
A
GLN
417
-119.91
76.68
1
A
ASN
446
-38.08
156.03
1
A
GLU
496
37.93
-129.04
1
A
ASN
544
36.27
41.86
1
A
ASP
549
-147.07
58.06
1
A
ASP
567
-83.79
-75.33
1
A
PHE
568
-27.66
138.67
1
A
ARG
586
25.00
70.60
39.514
-0.85
0.00
-0.20
-0.91
0.00
1.74
0.939
0.911
0.27324
0.22235
0.22484
2.00
30.00
975
18043
5.1
96.55
4.893
0.135
RANDOM
1
THROUGHOUT
FOURIER SYNTHESIS
0.225
0.197
0.80
0.80
1.40
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
2.00
30.00
29
2219
56
0
2134
0.018
0.022
2238
1.629
1.991
3036
5.924
5.000
261
0.126
0.200
331
0.007
0.020
1636
0.221
0.200
983
0.148
0.200
74
0.224
0.200
51
0.047
0.200
1
1.103
1.500
1313
2.032
2.000
2138
2.813
3.000
925
4.501
4.500
898
0.355
0.314
2.052
78
1266
20
2.0
50
3H3C
19055
2
0.081
1
10.1
2.8
0.496
2.0
2.07
2.03
1852
2.6
data collection
HKL-2000
refinement
REFMAC
data reduction
HKL-2000
data scaling
HKL-2000
phasing
REFMAC
Crystal structure of PYK2 in complex with Sulfoximine-substituted trifluoromethylpyrimidine analog
1
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
3
N
N
4
N
N
A
ALA
421
A
ALA
6
HELX_P
A
GLU
423
A
GLU
8
5
1
3
A
THR
464
A
THR
49
HELX_P
A
LEU
481
A
LEU
66
1
2
18
A
GLU
509
A
GLU
94
HELX_P
A
ASN
517
A
ASN
102
1
3
9
A
LYS
522
A
LYS
107
HELX_P
A
ILE
543
A
ILE
128
1
4
22
A
ALA
551
A
ALA
136
HELX_P
A
ARG
553
A
ARG
138
5
5
3
A
PRO
588
A
PRO
173
HELX_P
A
MET
592
A
MET
177
5
6
5
A
SER
593
A
SER
178
HELX_P
A
ARG
600
A
ARG
185
1
7
8
A
THR
603
A
THR
188
HELX_P
A
SER
620
A
SER
205
1
8
18
A
GLU
630
A
GLU
215
HELX_P
A
LYS
632
A
LYS
217
5
9
3
A
ASP
633
A
ASP
218
HELX_P
A
LYS
640
A
LYS
225
1
10
8
A
PRO
651
A
PRO
236
HELX_P
A
TRP
662
A
TRP
247
1
11
12
A
ASP
665
A
ASP
250
HELX_P
A
ARG
669
A
ARG
254
5
12
5
A
ARG
671
A
ARG
256
HELX_P
A
GLU
692
A
GLU
277
1
13
22
TRANSFERASE
PYK2, Kinase, Alternative splicing, ATP-binding, Cell membrane, Cytoplasm, Membrane, Nucleotide-binding, Phosphoprotein, Polymorphism, Transferase, Tyrosine-protein kinase
FAK2_HUMAN
UNP
1
416
Q14289
PQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE
EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIE
DEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLY
TLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIAME
416
692
3H3C
416
692
Q14289
A
1
1
277
5
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
VAL
425
A
VAL
10
A
GLY
434
A
GLY
19
A
GLY
437
A
GLY
22
A
THR
445
A
THR
30
A
LYS
451
A
LYS
36
A
LYS
457
A
LYS
42
A
TRP
499
A
TRP
84
A
GLU
503
A
GLU
88
A
LEU
489
A
LEU
74
A
ILE
493
A
ILE
78
A
ILE
555
A
ILE
140
A
SER
559
A
SER
144
A
CYS
562
A
CYS
147
A
LEU
565
A
LEU
150
BINDING SITE FOR RESIDUE SO4 A 1
A
SO4
1
Software
7
BINDING SITE FOR RESIDUE SO4 A 2
A
SO4
2
Software
3
BINDING SITE FOR RESIDUE SO4 A 3
A
SO4
3
Software
2
BINDING SITE FOR RESIDUE SO4 A 4
A
SO4
4
Software
2
BINDING SITE FOR RESIDUE SO4 A 5
A
SO4
5
Software
3
BINDING SITE FOR RESIDUE P1E A 999
A
P1E
999
Software
14
A
GLY
434
A
GLY
19
7
1_555
A
PHE
435
A
PHE
20
7
1_555
A
LYS
457
A
LYS
42
7
1_555
A
ASP
567
A
ASP
152
7
1_555
A
PHE
568
A
PHE
153
7
1_555
A
HOH
694
H
HOH
7
1_555
A
P1E
999
G
P1E
7
1_555
A
SER
620
A
SER
205
3
1_555
A
LYS
623
A
LYS
208
3
1_555
A
ASP
648
A
ASP
233
3
1_555
A
HOH
23
H
HOH
2
1_555
A
HIS
483
A
HIS
68
2
1_555
A
HIS
485
A
HIS
70
2
1_555
A
GLN
532
A
GLN
117
2
1_555
A
HOH
19
H
HOH
3
1_555
A
LYS
522
A
LYS
107
3
1_555
A
VAL
523
A
VAL
108
3
1_555
A
SO4
1
B
SO4
14
1_555
A
PRO
416
A
PRO
1
14
1_655
A
TYR
418
A
TYR
3
14
1_655
A
LEU
431
A
LEU
16
14
1_555
A
MET
502
A
MET
87
14
1_555
A
GLU
503
A
GLU
88
14
1_555
A
LEU
504
A
LEU
89
14
1_555
A
TYR
505
A
TYR
90
14
1_555
A
GLY
508
A
GLY
93
14
1_555
A
GLU
509
A
GLU
94
14
1_555
A
HIS
512
A
HIS
97
14
1_555
A
LEU
556
A
LEU
141
14
1_555
A
ASP
567
A
ASP
152
14
1_555
A
HOH
694
H
HOH
14
1_555
4
P 1 21 1