0.010204
0.005891
0.000000
0.000000
0.011783
0.000000
0.000000
0.000000
0.004910
0.00000
0.00000
0.00000
Jain, R.
Nair, D.T.
Johnson, R.E.
Prakash, L.
Prakash, S.
Aggarwal, A.K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
97.998
97.998
203.670
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C9 H12 Br N2 O8 P
387.078
n
5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
DNA linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O6 P
291.198
n
2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H16 N5 O12 P3
491.182
2'-DEOXYADENOSINE 5'-TRIPHOSPHATE
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
N
C
N
76
N
N
N
77
N
C
N
78
N
C
N
79
N
C
N
80
N
O
N
81
N
O
N
82
N
BR
N
83
R
C
N
84
N
C
N
85
S
C
N
86
R
C
N
87
N
O
N
88
N
O
N
89
N
C
N
90
N
O
N
91
N
P
N
92
N
O
N
93
N
O
N
94
N
O
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
N
N
108
R
C
N
109
N
C
N
110
N
O
N
111
N
C
N
112
N
S
N
113
N
O
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
O
N
122
N
P
N
123
N
O
N
124
N
O
N
125
N
O
N
126
N
C
N
127
R
C
N
128
N
O
N
129
S
C
N
130
N
O
N
131
N
C
N
132
R
C
Y
133
N
N
Y
134
N
C
Y
135
N
N
Y
136
N
C
Y
137
N
C
N
138
N
N
Y
139
N
N
Y
140
N
C
Y
141
N
N
Y
142
N
C
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
O
N
158
N
P
N
159
N
O
N
160
N
O
N
161
N
O
N
162
N
C
N
163
R
C
N
164
N
O
N
165
S
C
N
166
N
O
N
167
N
C
N
168
R
C
N
169
N
N
N
170
N
C
N
171
N
O
N
172
N
N
N
173
N
C
N
174
N
N
N
175
N
C
N
176
N
C
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
O
N
192
N
P
N
193
N
O
N
194
N
O
N
195
N
O
N
196
N
C
N
197
R
C
N
198
N
O
N
199
S
C
N
200
N
O
N
201
N
C
N
202
R
C
Y
203
N
N
Y
204
N
C
Y
205
N
N
Y
206
N
C
N
207
N
C
N
208
N
O
N
209
N
N
N
210
N
C
N
211
N
N
N
212
N
N
Y
213
N
C
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
N
N
229
N
C
N
230
N
N
N
231
N
C
N
232
N
C
N
233
N
C
N
234
N
O
N
235
N
N
N
236
R
C
N
237
N
C
N
238
N
C
N
239
S
C
N
240
N
O
N
241
N
C
N
242
N
O
N
243
N
P
N
244
N
O
N
245
N
O
N
246
N
O
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
O
N
262
N
P
N
263
N
O
N
264
N
O
N
265
N
O
N
266
N
C
N
267
R
C
N
268
N
O
N
269
S
C
N
270
N
O
N
271
N
C
N
272
R
C
N
273
N
N
N
274
N
C
N
275
N
O
N
276
N
N
N
277
N
C
N
278
N
O
N
279
N
C
N
280
N
C
N
281
N
C
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
P
N
298
N
O
N
299
N
O
N
300
N
O
N
301
S
P
N
302
N
O
N
303
N
O
N
304
N
O
N
305
S
P
N
306
N
O
N
307
N
O
N
308
N
O
N
309
N
O
N
310
N
C
N
311
R
C
N
312
N
O
N
313
S
C
N
314
N
O
N
315
N
C
N
316
R
C
Y
317
N
N
Y
318
N
C
Y
319
N
N
Y
320
N
C
Y
321
N
C
N
322
N
N
Y
323
N
N
Y
324
N
C
Y
325
N
N
Y
326
N
C
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
N
N
344
S
C
N
345
N
C
N
346
N
O
N
347
N
C
N
348
N
C
N
349
N
C
N
350
N
O
N
351
N
N
N
352
N
O
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
N
N
364
S
C
N
365
N
C
N
366
N
O
N
367
N
C
N
368
N
C
N
369
N
C
N
370
N
O
N
371
N
O
N
372
N
O
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
N
N
383
N
C
N
384
N
C
N
385
N
O
N
386
N
O
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
N
N
393
S
C
N
394
N
C
N
395
N
O
N
396
N
C
Y
397
N
C
Y
398
N
N
Y
399
N
C
Y
400
N
C
Y
401
N
N
N
402
N
O
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
O
N
414
N
H
N
415
N
H
N
416
N
N
N
417
S
C
N
418
N
C
N
419
N
O
N
420
S
C
N
421
N
C
N
422
N
C
N
423
N
C
N
424
N
O
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
N
N
439
S
C
N
440
N
C
N
441
N
O
N
442
N
C
N
443
N
C
N
444
N
C
N
445
N
C
N
446
N
O
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
N
N
461
S
C
N
462
N
C
N
463
N
O
N
464
N
C
N
465
N
C
N
466
N
C
N
467
N
C
N
468
N
N
N
469
N
O
N
470
N
H
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
N
N
486
S
C
N
487
N
C
N
488
N
O
N
489
N
C
N
490
N
C
N
491
N
S
N
492
N
C
N
493
N
O
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
H
N
498
N
H
N
499
N
H
N
500
N
H
N
501
N
H
N
502
N
H
N
503
N
H
N
504
N
H
N
505
N
MG
N
506
N
N
N
507
S
C
N
508
N
C
N
509
N
O
N
510
N
C
Y
511
N
C
Y
512
N
C
Y
513
N
C
Y
514
N
C
Y
515
N
C
Y
516
N
C
N
517
N
O
N
518
N
H
N
519
N
H
N
520
N
H
N
521
N
H
N
522
N
H
N
523
N
H
N
524
N
H
N
525
N
H
N
526
N
H
N
527
N
H
N
528
N
H
N
529
N
N
N
530
S
C
N
531
N
C
N
532
N
O
N
533
N
C
N
534
N
C
N
535
N
C
N
536
N
O
N
537
N
H
N
538
N
H
N
539
N
H
N
540
N
H
N
541
N
H
N
542
N
H
N
543
N
H
N
544
N
H
N
545
N
H
N
546
N
N
N
547
S
C
N
548
N
C
N
549
N
O
N
550
N
C
N
551
N
O
N
552
N
O
N
553
N
H
N
554
N
H
N
555
N
H
N
556
N
H
N
557
N
H
N
558
N
H
N
559
N
H
N
560
N
N
N
561
S
C
N
562
N
C
N
563
N
O
N
564
R
C
N
565
N
O
N
566
N
C
N
567
N
O
N
568
N
H
N
569
N
H
N
570
N
H
N
571
N
H
N
572
N
H
N
573
N
H
N
574
N
H
N
575
N
H
N
576
N
H
N
577
N
N
N
578
S
C
N
579
N
C
N
580
N
O
N
581
N
C
Y
582
N
C
Y
583
N
C
Y
584
N
C
Y
585
N
C
Y
586
N
C
Y
587
N
C
N
588
N
O
N
589
N
O
N
590
N
H
N
591
N
H
N
592
N
H
N
593
N
H
N
594
N
H
N
595
N
H
N
596
N
H
N
597
N
H
N
598
N
H
N
599
N
H
N
600
N
H
N
601
N
N
N
602
S
C
N
603
N
C
N
604
N
O
N
605
N
C
N
606
N
C
N
607
N
C
N
608
N
O
N
609
N
H
N
610
N
H
N
611
N
H
N
612
N
H
N
613
N
H
N
614
N
H
N
615
N
H
N
616
N
H
N
617
N
H
N
618
N
H
N
619
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
doub
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
doub
N
79
N
doub
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
doub
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
doub
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
sing
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
Y
145
N
sing
Y
146
N
doub
N
147
N
sing
Y
148
N
doub
N
149
N
sing
N
150
N
sing
Y
151
N
sing
Y
152
N
doub
N
153
N
sing
Y
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
doub
N
181
N
sing
N
182
N
doub
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
doub
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
Y
213
N
sing
Y
214
N
sing
Y
215
N
doub
N
216
N
sing
Y
217
N
sing
N
218
N
sing
Y
219
N
doub
N
220
N
doub
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
doub
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
doub
N
234
N
doub
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
doub
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
doub
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
doub
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
doub
N
293
N
sing
N
294
N
sing
N
295
N
doub
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
doub
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
doub
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
doub
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
Y
333
N
sing
Y
334
N
sing
Y
335
N
doub
N
336
N
sing
Y
337
N
sing
Y
338
N
sing
Y
339
N
doub
N
340
N
sing
Y
341
N
doub
N
342
N
sing
N
343
N
sing
Y
344
N
sing
Y
345
N
doub
N
346
N
sing
Y
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
doub
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
doub
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
doub
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
doub
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
doub
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
doub
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
Y
405
N
sing
Y
406
N
doub
Y
407
N
doub
N
408
N
sing
Y
409
N
sing
N
410
N
sing
Y
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
doub
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
doub
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
doub
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
doub
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
sing
N
497
N
sing
N
498
N
sing
N
499
N
sing
N
500
N
sing
N
501
N
sing
N
502
N
sing
N
503
N
sing
N
504
N
sing
N
505
N
sing
N
506
N
sing
N
507
N
sing
N
508
N
doub
N
509
N
sing
N
510
N
sing
N
511
N
sing
N
512
N
sing
Y
513
N
doub
Y
514
N
sing
Y
515
N
sing
N
516
N
sing
Y
517
N
doub
N
518
N
sing
Y
519
N
doub
N
520
N
sing
Y
521
N
sing
N
522
N
sing
N
523
N
sing
N
524
N
sing
N
525
N
sing
N
526
N
sing
N
527
N
sing
N
528
N
sing
N
529
N
sing
N
530
N
sing
N
531
N
doub
N
532
N
sing
N
533
N
sing
N
534
N
sing
N
535
N
sing
N
536
N
sing
N
537
N
sing
N
538
N
sing
N
539
N
sing
N
540
N
sing
N
541
N
sing
N
542
N
sing
N
543
N
sing
N
544
N
sing
N
545
N
sing
N
546
N
sing
N
547
N
sing
N
548
N
doub
N
549
N
sing
N
550
N
sing
N
551
N
sing
N
552
N
sing
N
553
N
sing
N
554
N
sing
N
555
N
sing
N
556
N
sing
N
557
N
sing
N
558
N
sing
N
559
N
sing
N
560
N
sing
N
561
N
doub
N
562
N
sing
N
563
N
sing
N
564
N
sing
N
565
N
sing
N
566
N
sing
N
567
N
sing
N
568
N
sing
N
569
N
sing
N
570
N
sing
N
571
N
sing
N
572
N
sing
N
573
N
sing
N
574
N
sing
N
575
N
sing
N
576
N
sing
N
577
N
doub
N
578
N
sing
N
579
N
sing
N
580
N
sing
N
581
N
sing
Y
582
N
doub
Y
583
N
sing
Y
584
N
sing
N
585
N
sing
Y
586
N
doub
N
587
N
sing
Y
588
N
doub
N
589
N
sing
Y
590
N
sing
N
591
N
sing
N
592
N
sing
N
593
N
sing
N
594
N
sing
N
595
N
sing
N
596
N
sing
N
597
N
sing
N
598
N
sing
N
599
N
sing
N
600
N
sing
N
601
N
doub
N
602
N
sing
N
603
N
sing
N
604
N
sing
N
605
N
sing
N
606
N
sing
N
607
N
sing
N
608
N
sing
N
609
N
sing
N
610
N
sing
N
611
N
sing
N
612
N
sing
UK
Structure
STRUE6
2005
0969-2126
17
974
980
10.1016/j.str.2009.04.011
19604477
Replication across template T/U by human DNA polymerase-iota.
2009
10.2210/pdb3h4b/pdb
pdb_00003h4b
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
110
1
CCD
2006-08-05
ADSC QUANTUM 315
SINGLE WAVELENGTH
M
x-ray
1
0.92017
1.0
17-ID
APS
0.92017
SYNCHROTRON
APS BEAMLINE 17-ID
44037.047
DNA polymerase iota
2.7.7.7
1
man
polymer
primer DNA strand
2091.414
5'-D(*AP*GP*GP*AP*CP*CP*(DOC))-3'
1
syn
polymer
template DNA strand
2802.665
5'-D(*TP*(BRU)P*GP*GP*GP*TP*CP*CP*T)-3'
1
syn
polymer
491.182
2'-DEOXYADENOSINE 5'-TRIPHOSPHATE
1
syn
non-polymer
24.305
MAGNESIUM ION
1
syn
non-polymer
18.015
water
156
nat
water
RAD30 homolog B, Eta2
no
no
ASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMNVRDAKEKCPQLVLVNGEDLTRYRE
MSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNNQSINLLDVLHIRLLVGSQIAAEMR
EAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIPGIGYKTAKCLEALGINSVRDLQTF
SPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNKIEELLASLLNRVCQDGRKPHTVRL
IIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMPFHLTLLSVCFCNLK
ASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMNVRDAKEKCPQLVLVNGEDLTRYRE
MSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNNQSINLLDVLHIRLLVGSQIAAEMR
EAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIPGIGYKTAKCLEALGINSVRDLQTF
SPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNKIEELLASLLNRVCQDGRKPHTVRL
IIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMPFHLTLLSVCFCNLK
A
polypeptide(L)
no
yes
(DA)(DG)(DG)(DA)(DC)(DC)(DOC)
AGGACCC
P
polydeoxyribonucleotide
no
yes
(DT)(BRU)(DG)(DG)(DG)(DT)(DC)(DC)(DT)
TUGGGTCCT
T
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
POLI, RAD30B
9606
Homo sapiens
4932
Saccharomyces cerevisiae
1
2.88
57.36
VAPOR DIFFUSION, HANGING DROP
6.5
10-15% PEG 5K MME, 0.2-0.4 M Ammonium sulfate, 0.1 M MES , pH 6.5 , VAPOR DIFFUSION, HANGING DROP, temperature 277K
277
8.780
1
20
P
867
T
847
-0.191
P_DA867:DT847_T
1
-1.038
-0.068
0.325
-0.291
3.101
1
19
P
868
T
846
-1.606
P_DG868:DC846_T
2
-1.909
-0.137
-0.084
0.037
-0.221
1
19
P
869
T
845
-2.658
P_DG869:DC845_T
3
-1.071
-0.121
-0.445
-0.028
9.530
1
20
P
870
T
844
0.037
P_DA870:DT844_T
4
7.066
0.150
-0.179
-0.132
17.995
1
19
P
871
T
843
0.211
P_DC871:DG843_T
5
-0.764
-0.083
-0.743
-0.136
11.551
1
19
P
872
T
842
-2.424
P_DC872:DG842_T
6
3.143
0.046
-0.700
-0.234
6.725
1
19
P
873
T
841
-2.746
P_DOC873:DG841_T
7
6.807
0.132
-0.559
-0.140
3.607
30.115
P
P
867
868
-0.651
T
T
847
846
3.564
-0.338
0.507
-0.781
PP_DA867DG868:DC846DT847_TT
1
3.664
-7.068
29.894
-1.427
-0.152
3.472
37.156
P
P
868
869
0.423
T
T
846
845
3.479
0.269
0.125
-0.894
PP_DG868DG869:DC845DC846_TT
2
2.751
-4.321
37.056
-1.441
0.194
3.038
32.659
P
P
869
870
10.734
T
T
845
844
3.149
5.993
0.046
-0.219
PP_DG869DA870:DT844DC845_TT
3
-3.468
6.212
31.936
-1.384
-0.658
3.028
28.967
P
P
870
871
6.811
T
T
844
843
3.122
3.398
0.562
-0.871
PP_DA870DC871:DG843DT844_TT
4
1.707
-3.423
28.722
-2.449
-0.767
2.932
33.074
P
P
871
872
21.320
T
T
843
842
3.626
11.862
-0.517
-1.418
PP_DC871DC872:DG842DG843_TT
5
-3.152
5.665
30.772
-4.577
0.354
2.878
26.686
P
P
872
873
21.309
T
T
842
841
3.541
9.620
-0.638
-1.271
PP_DC872DOC873:DG841DG842_TT
6
-0.876
1.941
24.906
-5.304
1.149
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
1
0
2009-07-21
1
1
2011-07-13
1
2
2023-09-06
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2009-04-18
REL
REL
DTP
2'-DEOXYADENOSINE 5'-TRIPHOSPHATE
MG
MAGNESIUM ION
HOH
water
2ALZ
PDB ENTRY 2ALZ
PDB
experimental model
DTP
875
4
DTP
DTP
875
A
MG2
871
5
MG
MG
871
A
TIP
1
6
HOH
HOH
1
A
TIP
2
6
HOH
HOH
2
A
TIP
4
6
HOH
HOH
4
A
TIP
5
6
HOH
HOH
5
A
TIP
6
6
HOH
HOH
6
A
TIP
7
6
HOH
HOH
7
A
TIP
9
6
HOH
HOH
9
A
TIP
10
6
HOH
HOH
10
A
TIP
11
6
HOH
HOH
11
A
TIP
12
6
HOH
HOH
12
A
TIP
13
6
HOH
HOH
13
A
TIP
14
6
HOH
HOH
14
A
TIP
15
6
HOH
HOH
15
A
TIP
16
6
HOH
HOH
16
A
TIP
17
6
HOH
HOH
17
A
TIP
18
6
HOH
HOH
18
A
TIP
19
6
HOH
HOH
19
A
TIP
20
6
HOH
HOH
20
A
TIP
21
6
HOH
HOH
21
A
TIP
22
6
HOH
HOH
22
A
TIP
23
6
HOH
HOH
23
A
TIP
24
6
HOH
HOH
24
A
TIP
25
6
HOH
HOH
415
A
TIP
26
6
HOH
HOH
416
A
TIP
27
6
HOH
HOH
417
A
TIP
28
6
HOH
HOH
418
A
TIP
29
6
HOH
HOH
419
A
TIP
30
6
HOH
HOH
420
A
TIP
31
6
HOH
HOH
421
A
TIP
32
6
HOH
HOH
422
A
TIP
33
6
HOH
HOH
423
A
TIP
34
6
HOH
HOH
424
A
TIP
35
6
HOH
HOH
425
A
TIP
36
6
HOH
HOH
426
A
TIP
37
6
HOH
HOH
427
A
TIP
38
6
HOH
HOH
428
A
TIP
39
6
HOH
HOH
429
A
TIP
40
6
HOH
HOH
430
A
TIP
41
6
HOH
HOH
431
A
TIP
42
6
HOH
HOH
432
A
TIP
43
6
HOH
HOH
433
A
TIP
44
6
HOH
HOH
434
A
TIP
45
6
HOH
HOH
435
A
TIP
47
6
HOH
HOH
436
A
TIP
49
6
HOH
HOH
437
A
TIP
50
6
HOH
HOH
438
A
TIP
51
6
HOH
HOH
439
A
TIP
54
6
HOH
HOH
440
A
TIP
56
6
HOH
HOH
441
A
TIP
57
6
HOH
HOH
442
A
TIP
58
6
HOH
HOH
443
A
TIP
59
6
HOH
HOH
444
A
TIP
60
6
HOH
HOH
445
A
TIP
61
6
HOH
HOH
446
A
TIP
62
6
HOH
HOH
447
A
TIP
63
6
HOH
HOH
448
A
TIP
64
6
HOH
HOH
449
A
TIP
65
6
HOH
HOH
450
A
TIP
66
6
HOH
HOH
451
A
TIP
67
6
HOH
HOH
452
A
TIP
68
6
HOH
HOH
453
A
TIP
69
6
HOH
HOH
454
A
TIP
70
6
HOH
HOH
455
A
TIP
71
6
HOH
HOH
456
A
TIP
72
6
HOH
HOH
457
A
TIP
73
6
HOH
HOH
458
A
TIP
74
6
HOH
HOH
459
A
TIP
75
6
HOH
HOH
460
A
TIP
76
6
HOH
HOH
461
A
TIP
77
6
HOH
HOH
462
A
TIP
78
6
HOH
HOH
463
A
TIP
79
6
HOH
HOH
464
A
TIP
81
6
HOH
HOH
465
A
TIP
82
6
HOH
HOH
466
A
TIP
83
6
HOH
HOH
467
A
TIP
84
6
HOH
HOH
468
A
TIP
85
6
HOH
HOH
469
A
TIP
87
6
HOH
HOH
470
A
TIP
90
6
HOH
HOH
471
A
TIP
92
6
HOH
HOH
472
A
TIP
93
6
HOH
HOH
473
A
TIP
95
6
HOH
HOH
474
A
TIP
96
6
HOH
HOH
475
A
TIP
97
6
HOH
HOH
476
A
TIP
98
6
HOH
HOH
477
A
TIP
99
6
HOH
HOH
478
A
TIP
100
6
HOH
HOH
479
A
TIP
101
6
HOH
HOH
480
A
TIP
102
6
HOH
HOH
481
A
TIP
104
6
HOH
HOH
482
A
TIP
105
6
HOH
HOH
483
A
TIP
106
6
HOH
HOH
484
A
TIP
107
6
HOH
HOH
485
A
TIP
108
6
HOH
HOH
486
A
TIP
109
6
HOH
HOH
487
A
TIP
110
6
HOH
HOH
488
A
TIP
112
6
HOH
HOH
489
A
TIP
113
6
HOH
HOH
490
A
TIP
114
6
HOH
HOH
491
A
TIP
116
6
HOH
HOH
492
A
TIP
117
6
HOH
HOH
493
A
TIP
118
6
HOH
HOH
494
A
TIP
119
6
HOH
HOH
495
A
TIP
120
6
HOH
HOH
496
A
TIP
123
6
HOH
HOH
497
A
TIP
124
6
HOH
HOH
498
A
TIP
125
6
HOH
HOH
499
A
TIP
126
6
HOH
HOH
500
A
TIP
127
6
HOH
HOH
501
A
TIP
128
6
HOH
HOH
502
A
TIP
129
6
HOH
HOH
503
A
TIP
131
6
HOH
HOH
504
A
TIP
132
6
HOH
HOH
505
A
TIP
133
6
HOH
HOH
506
A
TIP
134
6
HOH
HOH
507
A
TIP
136
6
HOH
HOH
508
A
TIP
137
6
HOH
HOH
509
A
TIP
138
6
HOH
HOH
510
A
TIP
140
6
HOH
HOH
511
A
TIP
141
6
HOH
HOH
512
A
TIP
142
6
HOH
HOH
513
A
TIP
143
6
HOH
HOH
514
A
TIP
145
6
HOH
HOH
515
A
TIP
146
6
HOH
HOH
516
A
TIP
148
6
HOH
HOH
517
A
TIP
149
6
HOH
HOH
518
A
TIP
150
6
HOH
HOH
519
A
TIP
151
6
HOH
HOH
520
A
TIP
152
6
HOH
HOH
521
A
TIP
153
6
HOH
HOH
522
A
TIP
154
6
HOH
HOH
523
A
TIP
156
6
HOH
HOH
524
A
TIP
157
6
HOH
HOH
525
A
TIP
159
6
HOH
HOH
526
A
TIP
162
6
HOH
HOH
527
A
TIP
164
6
HOH
HOH
528
A
TIP
166
6
HOH
HOH
529
A
TIP
167
6
HOH
HOH
530
A
TIP
171
6
HOH
HOH
531
A
TIP
172
6
HOH
HOH
532
A
TIP
173
6
HOH
HOH
533
A
TIP
8
6
HOH
HOH
8
P
TIP
80
6
HOH
HOH
80
P
TIP
86
6
HOH
HOH
86
P
TIP
103
6
HOH
HOH
103
P
TIP
139
6
HOH
HOH
139
P
TIP
147
6
HOH
HOH
147
P
TIP
168
6
HOH
HOH
168
P
TIP
3
6
HOH
HOH
3
T
TIP
46
6
HOH
HOH
46
T
TIP
53
6
HOH
HOH
53
T
TIP
88
6
HOH
HOH
88
T
TIP
91
6
HOH
HOH
91
T
TIP
135
6
HOH
HOH
135
T
TIP
169
6
HOH
HOH
169
T
TIP
170
6
HOH
HOH
170
T
ALA
25
n
1
ALA
25
A
SER
26
n
2
SER
26
A
SER
27
n
3
SER
27
A
ARG
28
n
4
ARG
28
A
VAL
29
n
5
VAL
29
A
ILE
30
n
6
ILE
30
A
VAL
31
n
7
VAL
31
A
HIS
32
n
8
HIS
32
A
VAL
33
n
9
VAL
33
A
ASP
34
n
10
ASP
34
A
LEU
35
n
11
LEU
35
A
ASP
36
n
12
ASP
36
A
CYS
37
n
13
CYS
37
A
PHE
38
n
14
PHE
38
A
TYR
39
n
15
TYR
39
A
ALA
40
n
16
ALA
40
A
GLN
41
n
17
GLN
41
A
VAL
42
n
18
VAL
42
A
GLU
43
n
19
GLU
43
A
MET
44
n
20
MET
44
A
ILE
45
n
21
ILE
45
A
SER
46
n
22
SER
46
A
ASN
47
n
23
ASN
47
A
PRO
48
n
24
PRO
48
A
GLU
49
n
25
GLU
49
A
LEU
50
n
26
LEU
50
A
LYS
51
n
27
LYS
51
A
ASP
52
n
28
ASP
52
A
LYS
53
n
29
LYS
53
A
PRO
54
n
30
PRO
54
A
LEU
55
n
31
LEU
55
A
GLY
56
n
32
GLY
56
A
VAL
57
n
33
VAL
57
A
GLN
58
n
34
GLN
58
A
GLN
59
n
35
GLN
59
A
LYS
60
n
36
LYS
60
A
TYR
61
n
37
TYR
61
A
LEU
62
n
38
LEU
62
A
VAL
63
n
39
VAL
63
A
VAL
64
n
40
VAL
64
A
THR
65
n
41
THR
65
A
CYS
66
n
42
CYS
66
A
ASN
67
n
43
ASN
67
A
TYR
68
n
44
TYR
68
A
GLU
69
n
45
GLU
69
A
ALA
70
n
46
ALA
70
A
ARG
71
n
47
ARG
71
A
LYS
72
n
48
LYS
72
A
LEU
73
n
49
LEU
73
A
GLY
74
n
50
GLY
74
A
VAL
75
n
51
VAL
75
A
LYS
76
n
52
LYS
76
A
LYS
77
n
53
LYS
77
A
LEU
78
n
54
LEU
78
A
MET
79
n
55
MET
79
A
ASN
80
n
56
ASN
80
A
VAL
81
n
57
VAL
81
A
ARG
82
n
58
ARG
82
A
ASP
83
n
59
ASP
83
A
ALA
84
n
60
ALA
84
A
LYS
85
n
61
LYS
85
A
GLU
86
n
62
GLU
86
A
LYS
87
n
63
LYS
87
A
CYS
88
n
64
CYS
88
A
PRO
89
n
65
PRO
89
A
GLN
90
n
66
GLN
90
A
LEU
91
n
67
LEU
91
A
VAL
92
n
68
VAL
92
A
LEU
93
n
69
LEU
93
A
VAL
94
n
70
VAL
94
A
ASN
95
n
71
ASN
95
A
GLY
96
n
72
GLY
96
A
GLU
97
n
73
GLU
97
A
ASP
98
n
74
ASP
98
A
LEU
99
n
75
LEU
99
A
THR
100
n
76
THR
100
A
ARG
101
n
77
ARG
101
A
TYR
102
n
78
TYR
102
A
ARG
103
n
79
ARG
103
A
GLU
104
n
80
GLU
104
A
MET
105
n
81
MET
105
A
SER
106
n
82
SER
106
A
TYR
107
n
83
TYR
107
A
LYS
108
n
84
LYS
108
A
VAL
109
n
85
VAL
109
A
THR
110
n
86
THR
110
A
GLU
111
n
87
GLU
111
A
LEU
112
n
88
LEU
112
A
LEU
113
n
89
LEU
113
A
GLU
114
n
90
GLU
114
A
GLU
115
n
91
GLU
115
A
PHE
116
n
92
PHE
116
A
SER
117
n
93
SER
117
A
PRO
118
n
94
PRO
118
A
VAL
119
n
95
VAL
119
A
VAL
120
n
96
VAL
120
A
GLU
121
n
97
GLU
121
A
ARG
122
n
98
ARG
122
A
LEU
123
n
99
LEU
123
A
GLY
124
n
100
GLY
124
A
PHE
125
n
101
PHE
125
A
ASP
126
n
102
ASP
126
A
GLU
127
n
103
GLU
127
A
ASN
128
n
104
ASN
128
A
PHE
129
n
105
PHE
129
A
VAL
130
n
106
VAL
130
A
ASP
131
n
107
ASP
131
A
LEU
132
n
108
LEU
132
A
THR
133
n
109
THR
133
A
GLU
134
n
110
GLU
134
A
MET
135
n
111
MET
135
A
VAL
136
n
112
VAL
136
A
GLU
137
n
113
GLU
137
A
LYS
138
n
114
LYS
138
A
ARG
139
n
115
ARG
139
A
LEU
140
n
116
LEU
140
A
GLN
141
n
117
GLN
141
A
GLN
142
n
118
GLN
142
A
LEU
143
n
119
LEU
143
A
GLN
144
n
120
GLN
144
A
SER
145
n
121
SER
145
A
ALA
146
n
122
ASP
146
A
GLU
147
n
123
GLU
147
A
LEU
148
n
124
LEU
148
A
SER
149
n
125
SER
149
A
ALA
150
n
126
ALA
150
A
VAL
151
n
127
VAL
151
A
THR
152
n
128
THR
152
A
VAL
153
n
129
VAL
153
A
SER
154
n
130
SER
154
A
GLY
155
n
131
GLY
155
A
HIS
156
n
132
HIS
156
A
VAL
157
n
133
VAL
157
A
TYR
158
n
134
TYR
158
A
ASN
159
n
135
ASN
159
A
ASN
160
n
136
ASN
160
A
GLN
161
n
137
GLN
161
A
SER
162
n
138
SER
162
A
ILE
163
n
139
ILE
163
A
ASN
164
n
140
ASN
164
A
LEU
165
n
141
LEU
165
A
LEU
166
n
142
LEU
166
A
ASP
167
n
143
ASP
167
A
VAL
168
n
144
VAL
168
A
LEU
169
n
145
LEU
169
A
HIS
170
n
146
HIS
170
A
ILE
171
n
147
ILE
171
A
ARG
172
n
148
ARG
172
A
LEU
173
n
149
LEU
173
A
LEU
174
n
150
LEU
174
A
VAL
175
n
151
VAL
175
A
GLY
176
n
152
GLY
176
A
SER
177
n
153
SER
177
A
GLN
178
n
154
GLN
178
A
ILE
179
n
155
ILE
179
A
ALA
180
n
156
ALA
180
A
ALA
181
n
157
ALA
181
A
GLU
182
n
158
GLU
182
A
MET
183
n
159
MET
183
A
ARG
184
n
160
ARG
184
A
GLU
185
n
161
GLU
185
A
ALA
186
n
162
ALA
186
A
MET
187
n
163
MET
187
A
TYR
188
n
164
TYR
188
A
ASN
189
n
165
ASN
189
A
GLN
190
n
166
GLN
190
A
LEU
191
n
167
LEU
191
A
GLY
192
n
168
GLY
192
A
LEU
193
n
169
LEU
193
A
THR
194
n
170
THR
194
A
GLY
195
n
171
GLY
195
A
CYS
196
n
172
CYS
196
A
ALA
197
n
173
ALA
197
A
GLY
198
n
174
GLY
198
A
VAL
199
n
175
VAL
199
A
ALA
200
n
176
ALA
200
A
SER
201
n
177
SER
201
A
ASN
202
n
178
ASN
202
A
LYS
203
n
179
LYS
203
A
LEU
204
n
180
LEU
204
A
LEU
205
n
181
LEU
205
A
ALA
206
n
182
ALA
206
A
LYS
207
n
183
LYS
207
A
LEU
208
n
184
LEU
208
A
VAL
209
n
185
VAL
209
A
SER
210
n
186
SER
210
A
GLY
211
n
187
GLY
211
A
VAL
212
n
188
VAL
212
A
PHE
213
n
189
PHE
213
A
LYS
214
n
190
LYS
214
A
PRO
215
n
191
PRO
215
A
ASN
216
n
192
ASN
216
A
GLN
217
n
193
GLN
217
A
GLN
218
n
194
GLN
218
A
THR
219
n
195
THR
219
A
VAL
220
n
196
VAL
220
A
LEU
221
n
197
LEU
221
A
LEU
222
n
198
LEU
222
A
PRO
223
n
199
PRO
223
A
GLU
224
n
200
GLU
224
A
SER
225
n
201
SER
225
A
CYS
226
n
202
CYS
226
A
GLN
227
n
203
GLN
227
A
HIS
228
n
204
HIS
228
A
LEU
229
n
205
LEU
229
A
ILE
230
n
206
ILE
230
A
HIS
231
n
207
HIS
231
A
SER
232
n
208
SER
232
A
LEU
233
n
209
LEU
233
A
ASN
234
n
210
ASN
234
A
HIS
235
n
211
HIS
235
A
ILE
236
n
212
ILE
236
A
LYS
237
n
213
LYS
237
A
GLU
238
n
214
GLU
238
A
ILE
239
n
215
ILE
239
A
PRO
240
n
216
PRO
240
A
GLY
241
n
217
GLY
241
A
ILE
242
n
218
ILE
242
A
GLY
243
n
219
GLY
243
A
TYR
244
n
220
TYR
244
A
ALA
245
n
221
LYS
245
A
THR
246
n
222
THR
246
A
ALA
247
n
223
ALA
247
A
LYS
248
n
224
LYS
248
A
CYS
249
n
225
CYS
249
A
LEU
250
n
226
LEU
250
A
GLU
251
n
227
GLU
251
A
ALA
252
n
228
ALA
252
A
LEU
253
n
229
LEU
253
A
GLY
254
n
230
GLY
254
A
ILE
255
n
231
ILE
255
A
ASN
256
n
232
ASN
256
A
SER
257
n
233
SER
257
A
VAL
258
n
234
VAL
258
A
ARG
259
n
235
ARG
259
A
ASP
260
n
236
ASP
260
A
LEU
261
n
237
LEU
261
A
GLN
262
n
238
GLN
262
A
THR
263
n
239
THR
263
A
PHE
264
n
240
PHE
264
A
SER
265
n
241
SER
265
A
PRO
266
n
242
PRO
266
A
LYS
267
n
243
LYS
267
A
ILE
268
n
244
ILE
268
A
LEU
269
n
245
LEU
269
A
GLU
270
n
246
GLU
270
A
ALA
271
n
247
LYS
271
A
GLU
272
n
248
GLU
272
A
LEU
273
n
249
LEU
273
A
GLY
274
n
250
GLY
274
A
ILE
275
n
251
ILE
275
A
SER
276
n
252
SER
276
A
VAL
277
n
253
VAL
277
A
ALA
278
n
254
ALA
278
A
GLN
279
n
255
GLN
279
A
ARG
280
n
256
ARG
280
A
ILE
281
n
257
ILE
281
A
GLN
282
n
258
GLN
282
A
LYS
283
n
259
LYS
283
A
LEU
284
n
260
LEU
284
A
SER
285
n
261
SER
285
A
PHE
286
n
262
PHE
286
A
GLY
287
n
263
GLY
287
A
GLU
288
n
264
GLU
288
A
ASP
289
n
265
ASP
289
A
ASN
290
n
266
ASN
290
A
SER
291
n
267
SER
291
A
PRO
292
n
268
PRO
292
A
VAL
293
n
269
VAL
293
A
ILE
294
n
270
ILE
294
A
LEU
295
n
271
LEU
295
A
SER
296
n
272
SER
296
A
GLY
297
n
273
GLY
297
A
PRO
298
n
274
PRO
298
A
PRO
299
n
275
PRO
299
A
GLN
300
n
276
GLN
300
A
SER
301
n
277
SER
301
A
PHE
302
n
278
PHE
302
A
SER
303
n
279
SER
303
A
GLU
304
n
280
GLU
304
A
GLU
305
n
281
GLU
305
A
ASP
306
n
282
ASP
306
A
SER
307
n
283
SER
307
A
PHE
308
n
284
PHE
308
A
LYS
309
n
285
LYS
309
A
LYS
310
n
286
LYS
310
A
CYS
311
n
287
CYS
311
A
SER
312
n
288
SER
312
A
SER
313
n
289
SER
313
A
GLU
314
n
290
GLU
314
A
ALA
315
n
291
VAL
315
A
ALA
316
n
292
GLU
316
A
ALA
317
n
293
ALA
317
A
LYS
318
n
294
LYS
318
A
ASN
319
n
295
ASN
319
A
LYS
320
n
296
LYS
320
A
ILE
321
n
297
ILE
321
A
GLU
322
n
298
GLU
322
A
GLU
323
n
299
GLU
323
A
LEU
324
n
300
LEU
324
A
LEU
325
n
301
LEU
325
A
ALA
326
n
302
ALA
326
A
SER
327
n
303
SER
327
A
LEU
328
n
304
LEU
328
A
LEU
329
n
305
LEU
329
A
ASN
330
n
306
ASN
330
A
ARG
331
n
307
ARG
331
A
VAL
332
n
308
VAL
332
A
CYS
333
n
309
CYS
333
A
GLN
334
n
310
GLN
334
A
ASP
335
n
311
ASP
335
A
GLY
336
n
312
GLY
336
A
ARG
337
n
313
ARG
337
A
ALA
338
n
314
LYS
338
A
PRO
339
n
315
PRO
339
A
HIS
340
n
316
HIS
340
A
THR
341
n
317
THR
341
A
VAL
342
n
318
VAL
342
A
ARG
343
n
319
ARG
343
A
LEU
344
n
320
LEU
344
A
ILE
345
n
321
ILE
345
A
ILE
346
n
322
ILE
346
A
ARG
347
n
323
ARG
347
A
ARG
348
n
324
ARG
348
A
ALA
349
n
325
TYR
349
A
ALA
350
n
326
SER
350
A
ALA
351
n
327
SER
351
A
ALA
352
n
328
GLU
352
A
ALA
353
n
329
LYS
353
A
ALA
354
n
330
HIS
354
A
ALA
355
n
331
TYR
355
A
GLY
356
n
332
GLY
356
A
ARG
357
n
333
ARG
357
A
GLU
358
n
334
GLU
358
A
SER
359
n
335
SER
359
A
ARG
360
n
336
ARG
360
A
GLN
361
n
337
GLN
361
A
CYS
362
n
338
CYS
362
A
PRO
363
n
339
PRO
363
A
ILE
364
n
340
ILE
364
A
PRO
365
n
341
PRO
365
A
SER
366
n
342
SER
366
A
ALA
367
n
343
HIS
367
A
VAL
368
n
344
VAL
368
A
ILE
369
n
345
ILE
369
A
GLN
370
n
346
GLN
370
A
n
347
371
A
n
348
372
A
n
349
373
A
n
350
374
A
n
351
375
A
n
352
376
A
n
353
377
A
n
354
378
A
ALA
379
n
355
VAL
379
A
MET
380
n
356
MET
380
A
THR
381
n
357
THR
381
A
PRO
382
n
358
PRO
382
A
MET
383
n
359
MET
383
A
VAL
384
n
360
VAL
384
A
ASP
385
n
361
ASP
385
A
ALA
386
n
362
ILE
386
A
LEU
387
n
363
LEU
387
A
MET
388
n
364
MET
388
A
ALA
389
n
365
LYS
389
A
LEU
390
n
366
LEU
390
A
PHE
391
n
367
PHE
391
A
ARG
392
n
368
ARG
392
A
ASN
393
n
369
ASN
393
A
MET
394
n
370
MET
394
A
n
371
395
A
n
372
396
A
n
373
397
A
n
374
398
A
n
375
399
A
n
376
400
A
n
377
401
A
n
378
402
A
n
379
403
A
THR
404
n
380
THR
404
A
ALA
405
n
381
LEU
405
A
LEU
406
n
382
LEU
406
A
SER
407
n
383
SER
407
A
VAL
408
n
384
VAL
408
A
CYS
409
n
385
CYS
409
A
PHE
410
n
386
PHE
410
A
CYS
411
n
387
CYS
411
A
ASN
412
n
388
ASN
412
A
LEU
413
n
389
LEU
413
A
LYS
414
n
390
LYS
414
A
DA
867
n
1
DA
867
P
DG
868
n
2
DG
868
P
DG
869
n
3
DG
869
P
DA
870
n
4
DA
870
P
DC
871
n
5
DC
871
P
DC
872
n
6
DC
872
P
DOC
873
n
7
DOC
873
P
DT
839
n
1
DT
839
T
BRU
840
n
2
BRU
840
T
DG
841
n
3
DG
841
T
DG
842
n
4
DG
842
T
DG
843
n
5
DG
843
T
DT
844
n
6
DT
844
T
DC
845
n
7
DC
845
T
DC
846
n
8
DC
846
T
DT
847
n
9
DT
847
T
author_and_software_defined_assembly
PISA
3
trimeric
4950
-27
19890
A
HOH
529
F
O
HOH
1_555
A
MG
871
E
MG
MG
1_555
A
DTP
875
D
O3G
DTP
1_555
124.3
A
HOH
529
F
O
HOH
1_555
A
MG
871
E
MG
MG
1_555
A
DTP
875
D
O2A
DTP
1_555
124.7
A
DTP
875
D
O3G
DTP
1_555
A
MG
871
E
MG
MG
1_555
A
DTP
875
D
O2A
DTP
1_555
94.3
P
DOC
873
2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE
B
DOC
7
DC
T
BRU
840
C
BRU
2
DU
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLU
121
A
N
GLU
97
A
O
PHE
129
A
O
PHE
105
A
O
ASN
128
A
O
ASN
104
A
N
VAL
33
A
N
VAL
9
A
N
ILE
30
A
N
ILE
6
A
O
ALA
200
A
O
ALA
176
A
N
VAL
199
A
N
VAL
175
A
O
THR
219
A
O
THR
195
A
O
GLN
218
A
O
GLN
194
A
N
HIS
156
A
N
HIS
132
A
O
MET
79
A
O
MET
55
A
N
VAL
63
A
N
VAL
39
A
O
THR
65
A
O
THR
41
A
N
VAL
57
A
N
VAL
33
A
N
GLN
58
A
N
GLN
34
A
O
VAL
94
A
O
VAL
70
A
N
PHE
302
A
N
PHE
278
A
O
PHE
410
A
O
PHE
386
A
O
ASN
412
A
O
ASN
388
A
N
HIS
340
A
N
HIS
316
A
N
ILE
346
A
N
ILE
322
A
O
GLU
358
A
O
GLU
334
A
N
PHE
302
A
N
PHE
278
A
O
PHE
410
A
O
PHE
386
A
O
ASN
412
A
O
ASN
388
A
N
HIS
340
A
N
HIS
316
A
N
VAL
342
A
N
VAL
318
A
O
CYS
362
A
O
CYS
338
1
A
CG
ASP
146
A
CG
ASP
122
1
Y
1
A
OD1
ASP
146
A
OD1
ASP
122
1
Y
1
A
OD2
ASP
146
A
OD2
ASP
122
1
Y
1
A
CG
LYS
245
A
CG
LYS
221
1
Y
1
A
CD
LYS
245
A
CD
LYS
221
1
Y
1
A
CE
LYS
245
A
CE
LYS
221
1
Y
1
A
NZ
LYS
245
A
NZ
LYS
221
1
Y
1
A
CG
LYS
271
A
CG
LYS
247
1
Y
1
A
CD
LYS
271
A
CD
LYS
247
1
Y
1
A
CE
LYS
271
A
CE
LYS
247
1
Y
1
A
NZ
LYS
271
A
NZ
LYS
247
1
Y
1
A
CG1
VAL
315
A
CG1
VAL
291
1
Y
1
A
CG2
VAL
315
A
CG2
VAL
291
1
Y
1
A
CG
GLU
316
A
CG
GLU
292
1
Y
1
A
CD
GLU
316
A
CD
GLU
292
1
Y
1
A
OE1
GLU
316
A
OE1
GLU
292
1
Y
1
A
OE2
GLU
316
A
OE2
GLU
292
1
Y
1
A
CG
LYS
338
A
CG
LYS
314
1
Y
1
A
CD
LYS
338
A
CD
LYS
314
1
Y
1
A
CE
LYS
338
A
CE
LYS
314
1
Y
1
A
NZ
LYS
338
A
NZ
LYS
314
1
Y
1
A
CG
TYR
349
A
CG
TYR
325
1
Y
1
A
CD1
TYR
349
A
CD1
TYR
325
1
Y
1
A
CD2
TYR
349
A
CD2
TYR
325
1
Y
1
A
CE1
TYR
349
A
CE1
TYR
325
1
Y
1
A
CE2
TYR
349
A
CE2
TYR
325
1
Y
1
A
CZ
TYR
349
A
CZ
TYR
325
1
Y
1
A
OH
TYR
349
A
OH
TYR
325
1
Y
1
A
OG
SER
350
A
OG
SER
326
1
Y
1
A
OG
SER
351
A
OG
SER
327
1
Y
1
A
CG
GLU
352
A
CG
GLU
328
1
Y
1
A
CD
GLU
352
A
CD
GLU
328
1
Y
1
A
OE1
GLU
352
A
OE1
GLU
328
1
Y
1
A
OE2
GLU
352
A
OE2
GLU
328
1
Y
1
A
CG
LYS
353
A
CG
LYS
329
1
Y
1
A
CD
LYS
353
A
CD
LYS
329
1
Y
1
A
CE
LYS
353
A
CE
LYS
329
1
Y
1
A
NZ
LYS
353
A
NZ
LYS
329
1
Y
1
A
CG
HIS
354
A
CG
HIS
330
1
Y
1
A
ND1
HIS
354
A
ND1
HIS
330
1
Y
1
A
CD2
HIS
354
A
CD2
HIS
330
1
Y
1
A
CE1
HIS
354
A
CE1
HIS
330
1
Y
1
A
NE2
HIS
354
A
NE2
HIS
330
1
Y
1
A
CG
TYR
355
A
CG
TYR
331
1
Y
1
A
CD1
TYR
355
A
CD1
TYR
331
1
Y
1
A
CD2
TYR
355
A
CD2
TYR
331
1
Y
1
A
CE1
TYR
355
A
CE1
TYR
331
1
Y
1
A
CE2
TYR
355
A
CE2
TYR
331
1
Y
1
A
CZ
TYR
355
A
CZ
TYR
331
1
Y
1
A
OH
TYR
355
A
OH
TYR
331
1
Y
1
A
CG
HIS
367
A
CG
HIS
343
1
Y
1
A
ND1
HIS
367
A
ND1
HIS
343
1
Y
1
A
CD2
HIS
367
A
CD2
HIS
343
1
Y
1
A
CE1
HIS
367
A
CE1
HIS
343
1
Y
1
A
NE2
HIS
367
A
NE2
HIS
343
1
Y
1
A
CG1
VAL
379
A
CG1
VAL
355
1
Y
1
A
CG2
VAL
379
A
CG2
VAL
355
1
Y
1
A
CG1
ILE
386
A
CG1
ILE
362
1
Y
1
A
CG2
ILE
386
A
CG2
ILE
362
1
Y
1
A
CD1
ILE
386
A
CD1
ILE
362
1
Y
1
A
CG
LYS
389
A
CG
LYS
365
1
Y
1
A
CD
LYS
389
A
CD
LYS
365
1
Y
1
A
CE
LYS
389
A
CE
LYS
365
1
Y
1
A
NZ
LYS
389
A
NZ
LYS
365
1
Y
1
A
CG
LEU
405
A
CG
LEU
381
1
Y
1
A
CD1
LEU
405
A
CD1
LEU
381
1
Y
1
A
CD2
LEU
405
A
CD2
LEU
381
1
Y
1
A
LYS
371
A
LYS
347
1
Y
1
A
LEU
372
A
LEU
348
1
Y
1
A
GLY
373
A
GLY
349
1
Y
1
A
THR
374
A
THR
350
1
Y
1
A
GLY
375
A
GLY
351
1
Y
1
A
ASN
376
A
ASN
352
1
Y
1
A
TYR
377
A
TYR
353
1
Y
1
A
ASP
378
A
ASP
354
1
Y
1
A
VAL
395
A
VAL
371
1
Y
1
A
ASN
396
A
ASN
372
1
Y
1
A
VAL
397
A
VAL
373
1
Y
1
A
LYS
398
A
LYS
374
1
Y
1
A
MET
399
A
MET
375
1
Y
1
A
PRO
400
A
PRO
376
1
Y
1
A
PHE
401
A
PHE
377
1
Y
1
A
HIS
402
A
HIS
378
1
Y
1
A
LEU
403
A
LEU
379
1
Y
1
A
A
O
O
GLY
HOH
254
469
2.12
1
A
A
O1G
O
DTP
HOH
875
526
2.12
1
A
A
O
O
HOH
HOH
481
512
2.14
1
A
A
O
O
THR
HOH
381
517
2.16
1
P
DC
871
0.071
SIDE CHAIN
1
P
DC
872
0.079
SIDE CHAIN
1
T
DG
842
0.069
SIDE CHAIN
1
T
DG
843
0.071
SIDE CHAIN
1
16.86
2.70
111.00
127.86
A
A
A
N
CA
C
LYS
LYS
LYS
214
214
214
N
1
2.37
0.30
108.30
110.67
T
T
T
O4'
C1'
N9
DG
DG
DG
841
841
841
N
1
A
SER
26
-177.96
-57.01
1
A
CYS
37
19.64
53.99
1
A
SER
46
-61.25
-72.91
1
A
GLU
49
-49.17
-17.86
1
A
ASP
52
46.30
-11.29
1
A
LYS
60
60.38
-123.91
1
A
CYS
88
-155.95
74.88
1
A
PRO
89
-64.06
43.85
1
A
GLN
90
-153.47
-14.25
1
A
SER
145
-60.64
57.10
1
A
ASP
146
-167.14
-65.53
1
A
ASN
216
37.51
65.86
1
A
LYS
245
-61.12
-76.17
1
A
THR
246
-37.67
-34.04
1
A
GLU
272
-142.40
-4.78
1
A
SER
276
-72.89
-85.03
1
A
ASP
306
-166.24
118.80
1
A
LYS
309
-40.20
82.39
1
A
LYS
310
22.74
49.93
1
A
CYS
311
-109.64
69.26
1
A
GLU
314
89.20
-2.40
1
A
GLU
316
66.97
-31.49
1
A
ALA
317
-75.98
24.15
1
A
CYS
333
-67.23
-82.40
1
A
GLN
334
-20.24
-53.59
1
A
SER
350
174.27
-102.72
1
A
SER
351
-91.39
-147.13
1
A
GLU
352
-103.38
63.38
1
A
LYS
353
-66.13
89.55
1
A
HIS
354
-59.31
-0.16
1
A
TYR
355
-172.76
99.22
1
A
THR
381
-21.82
-71.32
1
A
ASN
393
-49.69
-17.06
1
A
ASN
412
60.48
65.14
protein_rep.param
protein.top
dna-rna_rep.param
dna-rna_rep.top
water_rep.param
water_rep.top
ion.param
ion.top
lig.par
lig.top
52.5
2.68
7.58
0.00
2.68
0.00
-5.37
0.281
0.009
0.240
0.240
2.85
39.73
1094
13690
8.0
96.5
RANDOM
32120.51
0.000000
1
RESTRAINED
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
PDB ENTRY 2ALZ
Engh & Huber
FLAT MODEL
42.2426
0.328589
0.46
0.36
5.00
0.37
0.29
2.85
39.73
156
3384
31
320
2877
0.007
1.3
22.6
1.16
1.39
1.50
2.47
2.00
2.76
2.00
4.16
2.50
0.333
0.028
0.290
3.03
145
1937
6
7.0
91.2
83.2
2.85
50
3H4B
14231
0
0
0.092
1
22.631
7.8
100
0.380
2.85
2.95
6.1
1374
7.8
100
data collection
ADSC
Quantum
phasing
AMoRE
refinement
CNS
1.1
data reduction
HKL-2000
data scaling
HKL-2000
Ternary complex of human DNA polymerase iota with template U/T and incoming dATP
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
6
N
N
6
N
N
6
N
N
A
CYS
37
A
CYS
13
HELX_P
A
ASN
47
A
ASN
23
1
1
11
A
PRO
48
A
PRO
24
HELX_P
A
LYS
51
A
LYS
27
5
2
4
A
ASN
67
A
ASN
43
HELX_P
A
LEU
73
A
LEU
49
1
3
7
A
VAL
81
A
VAL
57
HELX_P
A
GLU
86
A
GLU
62
1
4
6
A
LEU
99
A
LEU
75
HELX_P
A
SER
117
A
SER
93
1
5
19
A
LEU
132
A
LEU
108
HELX_P
A
LEU
143
A
LEU
119
1
6
12
A
ASP
146
A
ASP
122
HELX_P
A
ALA
150
A
ALA
126
5
7
5
A
ASN
159
A
ASN
135
HELX_P
A
GLN
161
A
GLN
137
5
8
3
A
ASP
167
A
ASP
143
HELX_P
A
GLY
192
A
GLY
168
1
9
26
A
ASN
202
A
ASN
178
HELX_P
A
GLY
211
A
GLY
187
1
10
10
A
LEU
222
A
LEU
198
HELX_P
A
GLU
224
A
GLU
200
5
11
3
A
SER
225
A
SER
201
HELX_P
A
SER
232
A
SER
208
1
12
8
A
HIS
235
A
HIS
211
HELX_P
A
ILE
239
A
ILE
215
5
13
5
A
GLY
243
A
GLY
219
HELX_P
A
ALA
252
A
ALA
228
1
14
10
A
SER
257
A
SER
233
HELX_P
A
PHE
264
A
PHE
240
1
15
8
A
SER
265
A
SER
241
HELX_P
A
GLY
274
A
GLY
250
1
16
10
A
GLY
274
A
GLY
250
HELX_P
A
SER
285
A
SER
261
1
17
12
A
LYS
318
A
LYS
294
HELX_P
A
GLY
336
A
GLY
312
1
18
19
A
PRO
365
A
PRO
341
HELX_P
A
GLN
370
A
GLN
346
1
19
6
A
VAL
379
A
VAL
355
HELX_P
A
ASN
393
A
ASN
369
1
20
15
covale
1.604
both
P
DC
872
B
O3'
DC
6
1_555
P
DOC
873
B
P
DOC
7
1_555
covale
1.618
both
A
T
DT
839
C
O3'
DT
1
1_555
T
BRU
840
C
P
BRU
2
1_555
covale
1.601
both
B
T
DT
839
C
O3'
DT
1
1_555
T
BRU
840
C
P
BRU
2
1_555
covale
1.614
both
A
T
BRU
840
C
O3'
BRU
2
1_555
T
DG
841
C
P
DG
3
1_555
covale
1.592
both
B
T
BRU
840
C
O3'
BRU
2
1_555
T
DG
841
C
P
DG
3
1_555
metalc
2.805
A
HOH
529
F
O
HOH
1_555
A
MG
871
E
MG
MG
1_555
metalc
2.237
A
MG
871
E
MG
MG
1_555
A
DTP
875
D
O3G
DTP
1_555
metalc
2.094
A
MG
871
E
MG
MG
1_555
A
DTP
875
D
O2A
DTP
1_555
hydrog
WATSON-CRICK
P
DA
867
B
N1
DA
1
1_555
T
DT
847
C
N3
DT
9
1_555
hydrog
WATSON-CRICK
P
DA
867
B
N6
DA
1
1_555
T
DT
847
C
O4
DT
9
1_555
hydrog
WATSON-CRICK
P
DG
868
B
N1
DG
2
1_555
T
DC
846
C
N3
DC
8
1_555
hydrog
WATSON-CRICK
P
DG
868
B
N2
DG
2
1_555
T
DC
846
C
O2
DC
8
1_555
hydrog
WATSON-CRICK
P
DG
868
B
O6
DG
2
1_555
T
DC
846
C
N4
DC
8
1_555
hydrog
WATSON-CRICK
P
DG
869
B
N1
DG
3
1_555
T
DC
845
C
N3
DC
7
1_555
hydrog
WATSON-CRICK
P
DG
869
B
N2
DG
3
1_555
T
DC
845
C
O2
DC
7
1_555
hydrog
WATSON-CRICK
P
DG
869
B
O6
DG
3
1_555
T
DC
845
C
N4
DC
7
1_555
hydrog
WATSON-CRICK
P
DA
870
B
N1
DA
4
1_555
T
DT
844
C
N3
DT
6
1_555
hydrog
WATSON-CRICK
P
DA
870
B
N6
DA
4
1_555
T
DT
844
C
O4
DT
6
1_555
hydrog
WATSON-CRICK
P
DC
871
B
N3
DC
5
1_555
T
DG
843
C
N1
DG
5
1_555
hydrog
WATSON-CRICK
P
DC
871
B
N4
DC
5
1_555
T
DG
843
C
O6
DG
5
1_555
hydrog
WATSON-CRICK
P
DC
871
B
O2
DC
5
1_555
T
DG
843
C
N2
DG
5
1_555
hydrog
WATSON-CRICK
P
DC
872
B
N3
DC
6
1_555
T
DG
842
C
N1
DG
4
1_555
hydrog
WATSON-CRICK
P
DC
872
B
N4
DC
6
1_555
T
DG
842
C
O6
DG
4
1_555
hydrog
WATSON-CRICK
P
DC
872
B
O2
DC
6
1_555
T
DG
842
C
N2
DG
4
1_555
hydrog
WATSON-CRICK
P
DOC
873
B
N3
DOC
7
1_555
T
DG
841
C
N1
DG
3
1_555
hydrog
WATSON-CRICK
P
DOC
873
B
N4
DOC
7
1_555
T
DG
841
C
O6
DG
3
1_555
hydrog
WATSON-CRICK
P
DOC
873
B
O2
DOC
7
1_555
T
DG
841
C
N2
DG
3
1_555
REPLICATION/DNA
DNA polymerase iota, replication, DNA damage, DNA repair, DNA replication, DNA synthesis, DNA-binding, DNA-directed DNA polymerase, Magnesium, Metal-binding, Mutator protein, Nucleotidyltransferase, Nucleus, Schiff base, Transferase, REPLICATION-DNA COMPLEX
POLI_HUMAN
UNP
1
25
Q9UNA4
ASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMNVRDAKEKCPQLVLVNGEDLTRYRE
MSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNNQSINLLDVLHIRLLVGSQIAAEMR
EAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIPGIGYKTAKCLEALGINSVRDLQTF
SPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNKIEELLASLLNRVCQDGRKPHTVRL
IIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMPFHLTLLSVCFCNLK
3H4B
PDB
3
1
3H4B
AGGACCC
3H4B
PDB
2
1
3H4B
TUGGGTCCT
25
414
3H4B
25
414
Q9UNA4
A
1
1
390
839
847
3H4B
839
847
3H4B
T
2
1
9
867
873
3H4B
867
873
3H4B
P
3
1
7
6
4
4
4
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
VAL
120
A
VAL
96
A
ARG
122
A
ARG
98
A
GLU
127
A
GLU
103
A
ASP
131
A
ASP
107
A
ILE
30
A
ILE
6
A
LEU
35
A
LEU
11
A
GLY
195
A
GLY
171
A
ALA
200
A
ALA
176
A
GLN
218
A
GLN
194
A
VAL
220
A
VAL
196
A
HIS
156
A
HIS
132
A
VAL
157
A
VAL
133
A
MET
79
A
MET
55
A
ASN
80
A
ASN
56
A
LEU
62
A
LEU
38
A
CYS
66
A
CYS
42
A
LEU
55
A
LEU
31
A
GLN
59
A
GLN
35
A
VAL
92
A
VAL
68
A
ASN
95
A
ASN
71
A
SER
301
A
SER
277
A
GLU
304
A
GLU
280
A
LEU
406
A
LEU
382
A
LYS
414
A
LYS
390
A
LYS
338
A
LYS
314
A
ILE
346
A
ILE
322
A
GLU
358
A
GLU
334
A
SER
359
A
SER
335
A
SER
301
A
SER
277
A
GLU
304
A
GLU
280
A
LEU
406
A
LEU
382
A
LYS
414
A
LYS
390
A
LYS
338
A
LYS
314
A
ILE
346
A
ILE
322
A
CYS
362
A
CYS
338
A
PRO
363
A
PRO
339
BINDING SITE FOR RESIDUE DTP A 875
A
DTP
875
Software
12
BINDING SITE FOR RESIDUE MG A 871
A
MG
871
Software
3
A
CYS
37
A
CYS
13
12
1_555
A
THR
65
A
THR
41
12
1_555
A
ARG
71
A
ARG
47
12
1_555
A
LYS
77
A
LYS
53
12
1_555
A
LEU
78
A
LEU
54
12
1_555
A
LYS
214
A
LYS
190
12
1_555
A
HOH
526
F
HOH
12
1_555
A
HOH
533
F
HOH
12
1_555
A
MG
871
E
MG
12
1_555
P
DOC
873
B
DOC
7
12
1_555
T
BRU
840
C
BRU
2
12
1_555
T
DG
841
C
DG
3
12
1_555
A
ASP
126
A
ASP
102
3
1_555
A
HOH
529
F
HOH
3
1_555
A
DTP
875
D
DTP
3
1_555
179
P 65 2 2