0.011072 0.006392 0.000000 0.000000 0.012785 0.000000 0.000000 0.000000 0.022109 0.00000 0.00000 0.00000 Soman, J. Olson, J.S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.000 90.000 120.000 90.320 90.320 45.230 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C34 H32 Fe N4 O4 616.487 PROTOPORPHYRIN IX CONTAINING FE HEME non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N C N 124 N C N 125 N C N 126 N C Y 127 N C Y 128 N C Y 129 N C Y 130 N C N 131 N C N 132 N C N 133 N C N 134 N C N 135 N O N 136 N O N 137 N C N 138 N C N 139 N C N 140 N C N 141 N C N 142 N C N 143 N C Y 144 N C Y 145 N C Y 146 N C Y 147 N C N 148 N C N 149 N C N 150 N C N 151 N C N 152 N C N 153 N C N 154 N C N 155 N C N 156 N C N 157 N C N 158 N C N 159 N O N 160 N O Y 161 N N N 162 N N Y 163 N N N 164 N N N 165 N FE N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N N N 199 S C N 200 N C N 201 N O N 202 N C Y 203 N C Y 204 N N Y 205 N C Y 206 N C Y 207 N N N 208 N O N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N O N 220 N H N 221 N H N 222 N N N 223 S C N 224 N C N 225 N O N 226 S C N 227 N C N 228 N C N 229 N C N 230 N O N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N N N 245 S C N 246 N C N 247 N O N 248 N C N 249 N C N 250 N C N 251 N C N 252 N O N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N N N 267 S C N 268 N C N 269 N O N 270 N C N 271 N C N 272 N C N 273 N C N 274 N N N 275 N O N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N N N 292 S C N 293 N C N 294 N O N 295 N C N 296 N C N 297 N S N 298 N C N 299 N O N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N N N 312 S C N 313 N C N 314 N O N 315 N C Y 316 N C Y 317 N C Y 318 N C Y 319 N C Y 320 N C Y 321 N C N 322 N O N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N N N 335 S C N 336 N C N 337 N O N 338 N C N 339 N C N 340 N C N 341 N O N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N N N 352 S C N 353 N C N 354 N O N 355 N C N 356 N O N 357 N O N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N N N 366 S C N 367 N C N 368 N O N 369 R C N 370 N O N 371 N C N 372 N O N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N N N 383 S C N 384 N C N 385 N O N 386 N C Y 387 N C Y 388 N C Y 389 N C Y 390 N N Y 391 N C Y 392 N C Y 393 N C Y 394 N C Y 395 N C N 396 N O N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N N N 410 S C N 411 N C N 412 N O N 413 N C Y 414 N C Y 415 N C Y 416 N C Y 417 N C Y 418 N C Y 419 N C N 420 N O N 421 N O N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N N N 434 S C N 435 N C N 436 N O N 437 N C N 438 N C N 439 N C N 440 N O N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N doub N 118 N sing N 119 N sing N 120 N doub N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N doub N 126 N sing N 127 N sing Y 128 N doub Y 129 N sing Y 130 N sing N 131 N sing Y 132 N doub N 133 N sing Y 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N doub N 145 N sing N 146 N sing N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N doub N 153 N sing N 154 N sing N 155 N sing N 156 N doub N 157 N sing N 158 N sing N 159 N sing Y 160 N sing Y 161 N sing Y 162 N doub N 163 N sing Y 164 N sing N 165 N sing Y 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N doub N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N doub N 176 N doub N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N doub N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N doub N 205 N sing N 206 N sing N 207 N sing N 208 N sing Y 209 N sing Y 210 N doub Y 211 N doub N 212 N sing Y 213 N sing N 214 N sing Y 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N doub N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N doub N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N doub N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub N 322 N sing Y 323 N doub N 324 N sing Y 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N doub N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N doub N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N doub N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N doub N 382 N sing N 383 N sing N 384 N sing N 385 N sing Y 386 N doub Y 387 N sing Y 388 N sing N 389 N sing Y 390 N doub Y 391 N sing Y 392 N sing N 393 N sing Y 394 N sing Y 395 N doub N 396 N sing Y 397 N doub N 398 N sing Y 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N doub N 410 N sing N 411 N sing N 412 N sing N 413 N sing Y 414 N doub Y 415 N sing Y 416 N sing N 417 N sing Y 418 N doub N 419 N sing Y 420 N doub N 421 N sing Y 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N doub N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing US J.Am.Chem.Soc. JACSAT 0004 0002-7863 131 12265 12272 10.1021/ja903409j 19655795 Optical detection of disordered water within a protein cavity. 2009 10.2210/pdb3h57/pdb pdb_00003h57 100 1 IMAGE PLATE 2008-08-21 RIGAKU RAXIS IV++ Multilayer SINGLE WAVELENGTH x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RUH3R 17355.146 Myoglobin H64L, V68N, D122N 1 man polymer 616.487 PROTOPORPHYRIN IX CONTAINING FE 1 syn non-polymer 18.015 water 323 nat water no no MVLSEGEWQLVLHVWAKVEADVAGHGQDILIRLFKSHPETLEKFDRFKHLKTEAEMKASEDLKKLGVTNLTALGAILKKK GHHEAELKPLAQSHATKHKIPIKYLEFISEAIIHVLHSRHPGNFGADAQGAMNKALELFRKDIAAKYKELGYQG MVLSEGEWQLVLHVWAKVEADVAGHGQDILIRLFKSHPETLEKFDRFKHLKTEAEMKASEDLKKLGVTNLTALGAILKKK GHHEAELKPLAQSHATKHKIPIKYLEFISEAIIHVLHSRHPGNFGADAQGAMNKALELFRKDIAAKYKELGYQG A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Sperm whale sample MB 9755 Physeter catodon 562 Escherichia coli Phage resistant TB1 Plasmid PUC19 1 3.07 59.92 Batch Method 9.0 Protein Solution (20mg/ml protein in 0.02M Tris.HCl pH9.0) mixed with mother liquor (3.2M Ammonium Sulphate, 0.05M Tris.HCl, pH9.0) for final concentrations of 2.5M Ammonium Sulphate, Batch Method, temperature 293K 293 database_2 struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond pdbx_initial_refinement_model repository Initial release Version format compliance Database references Derived calculations Data collection Refinement description 1 0 2009-05-05 1 1 2011-07-13 1 2 2021-10-13 1 3 2023-09-06 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Myoglobin Cavity Mutant H64LV68N Met form RCSB Y RCSB 2009-04-21 REL REL HEM PROTOPORPHYRIN IX CONTAINING FE HOH water 2MGL PDB experimental model HEM 154 2 HEM HEM 154 A TIP 155 3 HOH HOH 155 A TIP 156 3 HOH HOH 156 A TIP 157 3 HOH HOH 157 A TIP 158 3 HOH HOH 158 A TIP 159 3 HOH HOH 159 A TIP 160 3 HOH HOH 160 A TIP 161 3 HOH HOH 161 A TIP 162 3 HOH HOH 162 A TIP 163 3 HOH HOH 163 A TIP 164 3 HOH HOH 164 A TIP 165 3 HOH HOH 165 A TIP 166 3 HOH HOH 166 A TIP 167 3 HOH HOH 167 A TIP 168 3 HOH HOH 168 A TIP 169 3 HOH HOH 169 A TIP 170 3 HOH HOH 170 A TIP 171 3 HOH HOH 171 A TIP 172 3 HOH HOH 172 A TIP 173 3 HOH HOH 173 A TIP 174 3 HOH HOH 174 A TIP 175 3 HOH HOH 175 A TIP 176 3 HOH HOH 176 A TIP 177 3 HOH HOH 177 A TIP 178 3 HOH HOH 178 A TIP 179 3 HOH HOH 179 A TIP 180 3 HOH HOH 180 A TIP 181 3 HOH HOH 181 A TIP 182 3 HOH HOH 182 A TIP 183 3 HOH HOH 183 A TIP 184 3 HOH HOH 184 A TIP 185 3 HOH HOH 185 A TIP 186 3 HOH HOH 186 A TIP 187 3 HOH HOH 187 A TIP 188 3 HOH HOH 188 A TIP 189 3 HOH HOH 189 A TIP 190 3 HOH HOH 190 A TIP 191 3 HOH HOH 191 A TIP 192 3 HOH HOH 192 A TIP 193 3 HOH HOH 193 A TIP 194 3 HOH HOH 194 A TIP 195 3 HOH HOH 195 A TIP 196 3 HOH HOH 196 A TIP 197 3 HOH HOH 197 A TIP 198 3 HOH HOH 198 A TIP 199 3 HOH HOH 199 A TIP 200 3 HOH HOH 200 A TIP 201 3 HOH HOH 201 A TIP 202 3 HOH HOH 202 A TIP 203 3 HOH HOH 203 A TIP 204 3 HOH HOH 204 A TIP 205 3 HOH HOH 205 A TIP 206 3 HOH HOH 206 A TIP 207 3 HOH HOH 207 A TIP 208 3 HOH HOH 208 A TIP 209 3 HOH HOH 209 A TIP 210 3 HOH HOH 210 A TIP 211 3 HOH HOH 211 A TIP 212 3 HOH HOH 212 A TIP 213 3 HOH HOH 213 A TIP 214 3 HOH HOH 214 A TIP 215 3 HOH HOH 215 A TIP 216 3 HOH HOH 216 A TIP 217 3 HOH HOH 217 A TIP 218 3 HOH HOH 218 A TIP 219 3 HOH HOH 219 A TIP 220 3 HOH HOH 220 A TIP 221 3 HOH HOH 221 A TIP 222 3 HOH HOH 222 A TIP 223 3 HOH HOH 223 A TIP 224 3 HOH HOH 224 A TIP 225 3 HOH HOH 225 A TIP 226 3 HOH HOH 226 A TIP 227 3 HOH HOH 227 A TIP 228 3 HOH HOH 228 A TIP 229 3 HOH HOH 229 A TIP 230 3 HOH HOH 230 A TIP 231 3 HOH HOH 231 A TIP 232 3 HOH HOH 232 A TIP 233 3 HOH HOH 233 A TIP 234 3 HOH HOH 234 A TIP 235 3 HOH HOH 235 A TIP 236 3 HOH HOH 236 A TIP 237 3 HOH HOH 237 A TIP 238 3 HOH HOH 238 A TIP 239 3 HOH HOH 239 A TIP 240 3 HOH HOH 240 A TIP 241 3 HOH HOH 241 A TIP 242 3 HOH HOH 242 A TIP 243 3 HOH HOH 243 A TIP 244 3 HOH HOH 244 A TIP 245 3 HOH HOH 245 A TIP 246 3 HOH HOH 246 A TIP 247 3 HOH HOH 247 A TIP 248 3 HOH HOH 248 A TIP 249 3 HOH HOH 249 A TIP 250 3 HOH HOH 250 A TIP 251 3 HOH HOH 251 A TIP 252 3 HOH HOH 252 A TIP 253 3 HOH HOH 253 A TIP 254 3 HOH HOH 254 A TIP 255 3 HOH HOH 255 A TIP 256 3 HOH HOH 256 A TIP 257 3 HOH HOH 257 A TIP 258 3 HOH HOH 258 A TIP 259 3 HOH HOH 259 A TIP 260 3 HOH HOH 260 A TIP 261 3 HOH HOH 261 A TIP 262 3 HOH HOH 262 A TIP 263 3 HOH HOH 263 A TIP 264 3 HOH HOH 264 A TIP 265 3 HOH HOH 265 A TIP 266 3 HOH HOH 266 A TIP 267 3 HOH HOH 267 A TIP 268 3 HOH HOH 268 A TIP 269 3 HOH HOH 269 A TIP 270 3 HOH HOH 270 A TIP 271 3 HOH HOH 271 A TIP 272 3 HOH HOH 272 A TIP 273 3 HOH HOH 273 A TIP 274 3 HOH HOH 274 A TIP 275 3 HOH HOH 275 A TIP 276 3 HOH HOH 276 A TIP 277 3 HOH HOH 277 A TIP 278 3 HOH HOH 278 A TIP 279 3 HOH HOH 279 A TIP 280 3 HOH HOH 280 A TIP 281 3 HOH HOH 281 A TIP 282 3 HOH HOH 282 A TIP 283 3 HOH HOH 283 A TIP 284 3 HOH HOH 284 A TIP 285 3 HOH HOH 285 A TIP 286 3 HOH HOH 286 A TIP 287 3 HOH HOH 287 A TIP 288 3 HOH HOH 288 A TIP 289 3 HOH HOH 289 A TIP 290 3 HOH HOH 290 A TIP 291 3 HOH HOH 291 A TIP 292 3 HOH HOH 292 A TIP 293 3 HOH HOH 293 A TIP 294 3 HOH HOH 294 A TIP 295 3 HOH HOH 295 A TIP 296 3 HOH HOH 296 A TIP 297 3 HOH HOH 297 A TIP 298 3 HOH HOH 298 A TIP 299 3 HOH HOH 299 A TIP 300 3 HOH HOH 300 A TIP 301 3 HOH HOH 301 A TIP 302 3 HOH HOH 302 A TIP 303 3 HOH HOH 303 A TIP 304 3 HOH HOH 304 A TIP 305 3 HOH HOH 305 A TIP 306 3 HOH HOH 306 A TIP 307 3 HOH HOH 307 A TIP 308 3 HOH HOH 308 A TIP 309 3 HOH HOH 309 A TIP 310 3 HOH HOH 310 A TIP 311 3 HOH HOH 311 A TIP 312 3 HOH HOH 312 A TIP 313 3 HOH HOH 313 A TIP 314 3 HOH HOH 314 A TIP 315 3 HOH HOH 315 A TIP 316 3 HOH HOH 316 A TIP 317 3 HOH HOH 317 A TIP 318 3 HOH HOH 318 A TIP 319 3 HOH HOH 319 A TIP 320 3 HOH HOH 320 A TIP 321 3 HOH HOH 321 A TIP 322 3 HOH HOH 322 A TIP 400 3 HOH HOH 400 A TIP 1 3 HOH HOH 401 A TIP 2 3 HOH HOH 402 A TIP 3 3 HOH HOH 403 A TIP 4 3 HOH HOH 404 A TIP 5 3 HOH HOH 405 A TIP 6 3 HOH HOH 406 A TIP 7 3 HOH HOH 407 A TIP 8 3 HOH HOH 408 A TIP 9 3 HOH HOH 409 A TIP 10 3 HOH HOH 410 A TIP 11 3 HOH HOH 411 A TIP 12 3 HOH HOH 412 A TIP 13 3 HOH HOH 413 A TIP 14 3 HOH HOH 414 A TIP 15 3 HOH HOH 415 A TIP 16 3 HOH HOH 416 A TIP 17 3 HOH HOH 417 A TIP 18 3 HOH HOH 418 A TIP 19 3 HOH HOH 419 A TIP 20 3 HOH HOH 420 A TIP 21 3 HOH HOH 421 A TIP 22 3 HOH HOH 422 A TIP 23 3 HOH HOH 423 A TIP 24 3 HOH HOH 424 A TIP 25 3 HOH HOH 425 A TIP 26 3 HOH HOH 426 A TIP 27 3 HOH HOH 427 A TIP 28 3 HOH HOH 428 A TIP 29 3 HOH HOH 429 A TIP 30 3 HOH HOH 430 A TIP 31 3 HOH HOH 431 A TIP 32 3 HOH HOH 432 A TIP 33 3 HOH HOH 433 A TIP 34 3 HOH HOH 434 A TIP 35 3 HOH HOH 435 A TIP 36 3 HOH HOH 436 A TIP 37 3 HOH HOH 437 A TIP 38 3 HOH HOH 438 A TIP 39 3 HOH HOH 439 A TIP 40 3 HOH HOH 440 A TIP 41 3 HOH HOH 441 A TIP 42 3 HOH HOH 442 A TIP 43 3 HOH HOH 443 A TIP 44 3 HOH HOH 444 A TIP 45 3 HOH HOH 445 A TIP 46 3 HOH HOH 446 A TIP 47 3 HOH HOH 447 A TIP 48 3 HOH HOH 448 A TIP 49 3 HOH HOH 449 A TIP 50 3 HOH HOH 450 A TIP 51 3 HOH HOH 451 A TIP 52 3 HOH HOH 452 A TIP 53 3 HOH HOH 453 A TIP 54 3 HOH HOH 454 A TIP 55 3 HOH HOH 455 A TIP 56 3 HOH HOH 456 A TIP 57 3 HOH HOH 457 A TIP 58 3 HOH HOH 458 A TIP 59 3 HOH HOH 459 A TIP 60 3 HOH HOH 460 A TIP 61 3 HOH HOH 461 A TIP 62 3 HOH HOH 462 A TIP 63 3 HOH HOH 463 A TIP 64 3 HOH HOH 464 A TIP 65 3 HOH HOH 465 A TIP 66 3 HOH HOH 466 A TIP 67 3 HOH HOH 467 A TIP 68 3 HOH HOH 468 A TIP 69 3 HOH HOH 469 A TIP 70 3 HOH HOH 470 A TIP 71 3 HOH HOH 471 A TIP 72 3 HOH HOH 472 A TIP 73 3 HOH HOH 473 A TIP 74 3 HOH HOH 474 A TIP 75 3 HOH HOH 475 A TIP 76 3 HOH HOH 476 A TIP 77 3 HOH HOH 477 A TIP 78 3 HOH HOH 478 A TIP 79 3 HOH HOH 479 A TIP 80 3 HOH HOH 480 A TIP 81 3 HOH HOH 481 A TIP 82 3 HOH HOH 482 A TIP 83 3 HOH HOH 483 A TIP 84 3 HOH HOH 484 A TIP 85 3 HOH HOH 485 A TIP 86 3 HOH HOH 486 A TIP 87 3 HOH HOH 487 A TIP 88 3 HOH HOH 488 A TIP 89 3 HOH HOH 489 A TIP 90 3 HOH HOH 490 A TIP 91 3 HOH HOH 491 A TIP 92 3 HOH HOH 492 A TIP 93 3 HOH HOH 493 A TIP 94 3 HOH HOH 494 A TIP 95 3 HOH HOH 495 A TIP 96 3 HOH HOH 496 A TIP 97 3 HOH HOH 497 A TIP 98 3 HOH HOH 498 A TIP 99 3 HOH HOH 499 A TIP 100 3 HOH HOH 500 A TIP 101 3 HOH HOH 501 A TIP 102 3 HOH HOH 502 A TIP 103 3 HOH HOH 503 A TIP 104 3 HOH HOH 504 A TIP 105 3 HOH HOH 505 A TIP 106 3 HOH HOH 506 A TIP 107 3 HOH HOH 507 A TIP 108 3 HOH HOH 508 A TIP 109 3 HOH HOH 509 A TIP 110 3 HOH HOH 510 A TIP 111 3 HOH HOH 511 A TIP 112 3 HOH HOH 512 A TIP 113 3 HOH HOH 513 A TIP 114 3 HOH HOH 514 A TIP 115 3 HOH HOH 515 A TIP 116 3 HOH HOH 516 A TIP 117 3 HOH HOH 517 A TIP 118 3 HOH HOH 518 A TIP 119 3 HOH HOH 519 A TIP 120 3 HOH HOH 520 A TIP 121 3 HOH HOH 521 A TIP 122 3 HOH HOH 522 A TIP 123 3 HOH HOH 523 A TIP 124 3 HOH HOH 524 A TIP 125 3 HOH HOH 525 A TIP 126 3 HOH HOH 526 A TIP 127 3 HOH HOH 527 A TIP 128 3 HOH HOH 528 A TIP 129 3 HOH HOH 529 A TIP 130 3 HOH HOH 530 A TIP 131 3 HOH HOH 531 A TIP 132 3 HOH HOH 532 A TIP 133 3 HOH HOH 533 A TIP 134 3 HOH HOH 534 A TIP 135 3 HOH HOH 535 A TIP 136 3 HOH HOH 536 A TIP 137 3 HOH HOH 537 A TIP 138 3 HOH HOH 538 A TIP 139 3 HOH HOH 539 A TIP 140 3 HOH HOH 540 A TIP 141 3 HOH HOH 541 A TIP 142 3 HOH HOH 542 A TIP 143 3 HOH HOH 543 A TIP 144 3 HOH HOH 544 A TIP 145 3 HOH HOH 545 A TIP 146 3 HOH HOH 546 A TIP 147 3 HOH HOH 547 A TIP 148 3 HOH HOH 548 A TIP 149 3 HOH HOH 549 A TIP 150 3 HOH HOH 550 A TIP 151 3 HOH HOH 551 A TIP 152 3 HOH HOH 552 A TIP 153 3 HOH HOH 553 A TIP 154 3 HOH HOH 554 A MET 0 n 1 MET 0 A VAL 1 n 2 VAL 1 A LEU 2 n 3 LEU 2 A SER 3 n 4 SER 3 A GLU 4 n 5 GLU 4 A GLY 5 n 6 GLY 5 A GLU 6 n 7 GLU 6 A TRP 7 n 8 TRP 7 A GLN 8 n 9 GLN 8 A LEU 9 n 10 LEU 9 A VAL 10 n 11 VAL 10 A LEU 11 n 12 LEU 11 A HIS 12 n 13 HIS 12 A VAL 13 n 14 VAL 13 A TRP 14 n 15 TRP 14 A ALA 15 n 16 ALA 15 A LYS 16 n 17 LYS 16 A VAL 17 n 18 VAL 17 A GLU 18 n 19 GLU 18 A ALA 19 n 20 ALA 19 A ASP 20 n 21 ASP 20 A VAL 21 n 22 VAL 21 A ALA 22 n 23 ALA 22 A GLY 23 n 24 GLY 23 A HIS 24 n 25 HIS 24 A GLY 25 n 26 GLY 25 A GLN 26 n 27 GLN 26 A ASP 27 n 28 ASP 27 A ILE 28 n 29 ILE 28 A LEU 29 n 30 LEU 29 A ILE 30 n 31 ILE 30 A ARG 31 n 32 ARG 31 A LEU 32 n 33 LEU 32 A PHE 33 n 34 PHE 33 A LYS 34 n 35 LYS 34 A SER 35 n 36 SER 35 A HIS 36 n 37 HIS 36 A PRO 37 n 38 PRO 37 A GLU 38 n 39 GLU 38 A THR 39 n 40 THR 39 A LEU 40 n 41 LEU 40 A GLU 41 n 42 GLU 41 A LYS 42 n 43 LYS 42 A PHE 43 n 44 PHE 43 A ASP 44 n 45 ASP 44 A ARG 45 n 46 ARG 45 A PHE 46 n 47 PHE 46 A LYS 47 n 48 LYS 47 A HIS 48 n 49 HIS 48 A LEU 49 n 50 LEU 49 A LYS 50 n 51 LYS 50 A THR 51 n 52 THR 51 A GLU 52 n 53 GLU 52 A ALA 53 n 54 ALA 53 A GLU 54 n 55 GLU 54 A MET 55 n 56 MET 55 A LYS 56 n 57 LYS 56 A ALA 57 n 58 ALA 57 A SER 58 n 59 SER 58 A GLU 59 n 60 GLU 59 A ASP 60 n 61 ASP 60 A LEU 61 n 62 LEU 61 A LYS 62 n 63 LYS 62 A LYS 63 n 64 LYS 63 A LEU 64 n 65 LEU 64 A GLY 65 n 66 GLY 65 A VAL 66 n 67 VAL 66 A THR 67 n 68 THR 67 A ASN 68 n 69 ASN 68 A LEU 69 n 70 LEU 69 A THR 70 n 71 THR 70 A ALA 71 n 72 ALA 71 A LEU 72 n 73 LEU 72 A GLY 73 n 74 GLY 73 A ALA 74 n 75 ALA 74 A ILE 75 n 76 ILE 75 A LEU 76 n 77 LEU 76 A LYS 77 n 78 LYS 77 A LYS 78 n 79 LYS 78 A LYS 79 n 80 LYS 79 A GLY 80 n 81 GLY 80 A HIS 81 n 82 HIS 81 A HIS 82 n 83 HIS 82 A GLU 83 n 84 GLU 83 A ALA 84 n 85 ALA 84 A GLU 85 n 86 GLU 85 A LEU 86 n 87 LEU 86 A LYS 87 n 88 LYS 87 A PRO 88 n 89 PRO 88 A LEU 89 n 90 LEU 89 A ALA 90 n 91 ALA 90 A GLN 91 n 92 GLN 91 A SER 92 n 93 SER 92 A HIS 93 n 94 HIS 93 A ALA 94 n 95 ALA 94 A THR 95 n 96 THR 95 A LYS 96 n 97 LYS 96 A HIS 97 n 98 HIS 97 A LYS 98 n 99 LYS 98 A ILE 99 n 100 ILE 99 A PRO 100 n 101 PRO 100 A ILE 101 n 102 ILE 101 A LYS 102 n 103 LYS 102 A TYR 103 n 104 TYR 103 A LEU 104 n 105 LEU 104 A GLU 105 n 106 GLU 105 A PHE 106 n 107 PHE 106 A ILE 107 n 108 ILE 107 A SER 108 n 109 SER 108 A GLU 109 n 110 GLU 109 A ALA 110 n 111 ALA 110 A ILE 111 n 112 ILE 111 A ILE 112 n 113 ILE 112 A HIS 113 n 114 HIS 113 A VAL 114 n 115 VAL 114 A LEU 115 n 116 LEU 115 A HIS 116 n 117 HIS 116 A SER 117 n 118 SER 117 A ARG 118 n 119 ARG 118 A HIS 119 n 120 HIS 119 A PRO 120 n 121 PRO 120 A GLY 121 n 122 GLY 121 A ASN 122 n 123 ASN 122 A PHE 123 n 124 PHE 123 A GLY 124 n 125 GLY 124 A ALA 125 n 126 ALA 125 A ASP 126 n 127 ASP 126 A ALA 127 n 128 ALA 127 A GLN 128 n 129 GLN 128 A GLY 129 n 130 GLY 129 A ALA 130 n 131 ALA 130 A MET 131 n 132 MET 131 A ASN 132 n 133 ASN 132 A LYS 133 n 134 LYS 133 A ALA 134 n 135 ALA 134 A LEU 135 n 136 LEU 135 A GLU 136 n 137 GLU 136 A LEU 137 n 138 LEU 137 A PHE 138 n 139 PHE 138 A ARG 139 n 140 ARG 139 A LYS 140 n 141 LYS 140 A ASP 141 n 142 ASP 141 A ILE 142 n 143 ILE 142 A ALA 143 n 144 ALA 143 A ALA 144 n 145 ALA 144 A LYS 145 n 146 LYS 145 A TYR 146 n 147 TYR 146 A LYS 147 n 148 LYS 147 A GLU 148 n 149 GLU 148 A LEU 149 n 150 LEU 149 A GLY 150 n 151 GLY 150 A TYR 151 n 152 TYR 151 A GLN 152 n 153 GLN 152 A GLY 153 n 154 GLY 153 A author_and_software_defined_assembly PISA 1 monomeric A HIS 93 A NE2 HIS 94 1_555 A HEM 154 B FE HEM 1_555 A HEM 154 B NA HEM 1_555 94.2 A HIS 93 A NE2 HIS 94 1_555 A HEM 154 B FE HEM 1_555 A HEM 154 B NB HEM 1_555 94.4 A HEM 154 B NA HEM 1_555 A HEM 154 B FE HEM 1_555 A HEM 154 B NB HEM 1_555 89.6 A HIS 93 A NE2 HIS 94 1_555 A HEM 154 B FE HEM 1_555 A HEM 154 B NC HEM 1_555 99.8 A HEM 154 B NA HEM 1_555 A HEM 154 B FE HEM 1_555 A HEM 154 B NC HEM 1_555 166.0 A HEM 154 B NB HEM 1_555 A HEM 154 B FE HEM 1_555 A HEM 154 B NC HEM 1_555 89.4 A HIS 93 A NE2 HIS 94 1_555 A HEM 154 B FE HEM 1_555 A HEM 154 B ND HEM 1_555 97.7 A HEM 154 B NA HEM 1_555 A HEM 154 B FE HEM 1_555 A HEM 154 B ND HEM 1_555 89.3 A HEM 154 B NB HEM 1_555 A HEM 154 B FE HEM 1_555 A HEM 154 B ND HEM 1_555 167.9 A HEM 154 B NC HEM 1_555 A HEM 154 B FE HEM 1_555 A HEM 154 B ND HEM 1_555 88.9 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A ASP 20 -163.00 73.46 1 A HIS 81 -91.66 56.37 1 A TYR 151 -108.75 -61.30 protein_rep.param CVheme.par water_rep.param ion.param 90.09 16.792 4.79 -0.513 -1.174 0.000 -0.513 0.000 1.027 0.233 0.214 1.700 45.16 1066 22372 22079 4.600 94.500 1.00 0.46 random 1 Restrained THROUGHOUT 0.00 FOURIER SYNTHESIS 2mgl Engh & Huber 53.229 0.22 0.02 5.00 0.13 0.06 1.700 45.16 323 1589 43 0 1223 0.007 1.4 17.8 0.77 0.279 0.022 0.247 1.81 152 2862 77.7 15.0 1.540 45.160 3H57 31218 24865 3.0 0.040 0.950 1 23.8 3.900 734 79.600 0.118 1.54 1.60 3.9 715 566 0.420 1.26 18.20 data processing Jim W. Pflugrath Jim.Pflugrath@Rigaku.com Jun 25 2008 http://www.rigaku.com/software/dtrek.html d*TREK package 9.9.3L refinement Axel T. Brunger axel.brunger@yale.edu Fortran_77 http://cns-online.org/ CNS package 1.1 data extraction PDB help@deposit.rcsb.org June 11, 2008 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.005 data collection CrystalClear data reduction CrystalClear data scaling d*TREK phasing CNS Myoglobin Cavity Mutant H64LV68N Deoxy form 1 N N 2 N N 3 N N A SER 3 A SER 4 HELX_P A GLU 18 A GLU 19 1 1 16 A ASP 20 A ASP 21 HELX_P A HIS 36 A HIS 37 1 2 17 A PRO 37 A PRO 38 HELX_P A PHE 43 A PHE 44 5 3 7 A THR 51 A THR 52 HELX_P A SER 58 A SER 59 1 4 8 A SER 58 A SER 59 HELX_P A LYS 78 A LYS 79 1 5 21 A HIS 82 A HIS 83 HELX_P A LYS 96 A LYS 97 1 6 15 A PRO 100 A PRO 101 HELX_P A HIS 119 A HIS 120 1 7 20 A GLY 124 A GLY 125 HELX_P A GLY 150 A GLY 151 1 8 27 metalc 2.110 A HIS 93 A NE2 HIS 94 1_555 A HEM 154 B FE HEM 1_555 OXYGEN STORAGE, OXYGEN TRANSPORT Myoglobin, active site hydration, ligand entry and exit, oxygen storage and transport, Heme, Iron, Metal-binding, Muscle protein, Oxygen transport, Transport, OXYGEN STORAGE MYG_PHYCA UNP 1 1 P02185 MVLSEGEWQLVLHVWAKVEADVAGHGQDILIRLFKSHPETLEKFDRFKHLKTEAEMKASEDLKKHGVTVLTALGAILKKK GHHEAELKPLAQSHATKHKIPIKYLEFISEAIIHVLHSRHPGDFGADAQGAMNKALELFRKDIAAKYKELGYQG 1 154 3H57 0 153 P02185 A 1 1 154 1 HIS engineered mutation LEU 64 3H57 A P02185 UNP 65 65 1 VAL engineered mutation ASN 68 3H57 A P02185 UNP 69 69 1 ASP engineered mutation ASN 122 3H57 A P02185 UNP 123 123 BINDING SITE FOR RESIDUE HEM A 154 A HEM 154 Software 18 A LYS 42 A LYS 43 18 1_555 A PHE 43 A PHE 44 18 1_555 A ARG 45 A ARG 46 18 1_555 A THR 67 A THR 68 18 1_555 A ASN 68 A ASN 69 18 1_555 A ALA 71 A ALA 72 18 1_555 A LEU 89 A LEU 90 18 1_555 A SER 92 A SER 93 18 1_555 A HIS 93 A HIS 94 18 1_555 A HIS 97 A HIS 98 18 1_555 A ILE 99 A ILE 100 18 1_555 A TYR 103 A TYR 104 18 1_555 A HOH 227 C HOH 18 1_555 A HOH 448 C HOH 18 1_555 A HOH 455 C HOH 18 1_555 A HOH 462 C HOH 18 1_555 A HOH 464 C HOH 18 1_555 A HOH 551 C HOH 18 1_555 168 P 6