0.008135 0.004697 0.000000 0.000000 0.009394 0.000000 0.000000 0.000000 0.012241 0.000000 0.000000 0.000000 Cheung, J. Le-Khac, M. Hendrickson, W.A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.000 90.000 120.000 122.920 122.920 81.692 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Na 1 22.990 SODIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N NA N 251 N N N 252 S C N 253 N C N 254 N O N 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C Y 261 N C N 262 N O N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N N N 275 S C N 276 N C N 277 N O N 278 N C N 279 N C N 280 N C N 281 N O N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N N N 292 S C N 293 N C N 294 N O N 295 N C N 296 N O N 297 N O N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N N N 306 S C N 307 N C N 308 N O N 309 R C N 310 N O N 311 N C N 312 N O N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N N N 323 S C N 324 N C N 325 N O N 326 N C Y 327 N C Y 328 N C Y 329 N C Y 330 N N Y 331 N C Y 332 N C Y 333 N C Y 334 N C Y 335 N C N 336 N O N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N N N 350 S C N 351 N C N 352 N O N 353 N C Y 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C Y 359 N C N 360 N O N 361 N O N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N N N 374 S C N 375 N C N 376 N O N 377 N C N 378 N C N 379 N C N 380 N O N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub Y 322 N sing Y 323 N sing N 324 N sing Y 325 N sing Y 326 N doub N 327 N sing Y 328 N doub N 329 N sing Y 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing Y 345 N doub Y 346 N sing Y 347 N sing N 348 N sing Y 349 N doub N 350 N sing Y 351 N doub N 352 N sing Y 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing US Proteins PSFGEY 0867 0887-3585 77 235 241 10.1002/prot.22485 19544572 Crystal structure of a histidine kinase sensor domain with similarity to periplasmic binding proteins. 2009 10.2210/pdb3h7m/pdb pdb_00003h7m 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 100 1 CCD 2005-09-23 MAD M x-ray 1 0.9870 1.0 0.9795 1.0 0.9791 1.0 0.9715 1.0 16.20 96529 0.057 1.02 2.900 20.000 15305 99.80 6.30 X4A NSLS 0.9870, 0.9795, 0.9791, 0.9715 SYNCHROTRON NSLS BEAMLINE X4A 25961.713 Sensor protein 2.7.13.3 1 man polymer 22.990 SODIUM ION 1 syn non-polymer 18.015 water 141 nat water no no GSADAPRDRHRTIVVGGDRDYPPYEFIDQNGKPAGYNVELTRAIAEVMGMTVEFRLGAWSEMFSALKSGRVDVLQGISWS EKRARQIDFTPPHTIVYHAIFARRDSPPAAGLEDLRGRKVALHRDGIMHEYLAERGYGKDLVLTPTPADALRLLAAGGCD YAVVAMVPGMYIIRENRLTNLVPVARSIAAQRYGYAVRQGDAELLARFSEGLAILRKTGQYEAIRAKWLGVLEP GSADAPRDRHRTIVVGGDRDYPPYEFIDQNGKPAGYNVELTRAIAEVMGMTVEFRLGAWSEMFSALKSGRVDVLQGISWS EKRARQIDFTPPHTIVYHAIFARRDSPPAAGLEDLRGRKVALHRDGIMHEYLAERGYGKDLVLTPTPADALRLLAAGGCD YAVVAMVPGMYIIRENRLTNLVPVARSIAAQRYGYAVRQGDAELLARFSEGLAILRKTGQYEAIRAKWLGVLEP A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample GSU2755 35554 Geobacter sulfurreducens 562 Escherichia coli BL21(DE3) plasmid pGEX4T2 1 3.43 64.15 VAPOR DIFFUSION 6.0 isopropanol, PEG3350, calcium acetate, pH 6.0, vapor diffusion, temperature 277K 277 software chem_comp_atom chem_comp_bond database_2 struct_conn struct_ref_seq_dif struct_site repository Initial release Version format compliance Refinement description Data collection Database references Derived calculations 1 0 2009-06-30 1 1 2011-07-13 1 2 2017-11-01 1 3 2024-02-21 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2009-04-27 REL REL 0.036 1.019 100.00 9.30 0.054 1.036 100.00 9.20 0.050 1.004 100.00 8.00 0.053 1.006 100.00 6.40 0.059 1.019 99.80 5.20 0.076 1.040 99.90 5.20 0.112 1.026 99.90 5.20 0.162 1.007 100.00 5.10 0.241 1.035 99.90 4.90 0.283 1.036 98.10 4.40 NA SODIUM ION HOH water NA 1 2 NA NA 1 A HOH 2 3 HOH HOH 2 A HOH 3 3 HOH HOH 3 A HOH 4 3 HOH HOH 4 A HOH 5 3 HOH HOH 5 A HOH 6 3 HOH HOH 6 A HOH 7 3 HOH HOH 7 A HOH 8 3 HOH HOH 8 A HOH 9 3 HOH HOH 9 A HOH 10 3 HOH HOH 10 A HOH 11 3 HOH HOH 11 A HOH 12 3 HOH HOH 12 A HOH 13 3 HOH HOH 13 A HOH 14 3 HOH HOH 14 A HOH 15 3 HOH HOH 15 A HOH 16 3 HOH HOH 16 A HOH 17 3 HOH HOH 17 A HOH 18 3 HOH HOH 18 A HOH 19 3 HOH HOH 19 A HOH 20 3 HOH HOH 20 A HOH 21 3 HOH HOH 21 A HOH 22 3 HOH HOH 22 A HOH 23 3 HOH HOH 23 A HOH 24 3 HOH HOH 24 A HOH 25 3 HOH HOH 25 A HOH 26 3 HOH HOH 26 A HOH 27 3 HOH HOH 27 A HOH 28 3 HOH HOH 28 A HOH 29 3 HOH HOH 29 A HOH 30 3 HOH HOH 30 A HOH 31 3 HOH HOH 31 A HOH 32 3 HOH HOH 32 A HOH 33 3 HOH HOH 33 A HOH 34 3 HOH HOH 34 A HOH 35 3 HOH HOH 35 A HOH 36 3 HOH HOH 36 A HOH 37 3 HOH HOH 37 A HOH 38 3 HOH HOH 38 A HOH 39 3 HOH HOH 39 A HOH 40 3 HOH HOH 40 A HOH 41 3 HOH HOH 41 A HOH 42 3 HOH HOH 42 A HOH 43 3 HOH HOH 43 A HOH 44 3 HOH HOH 44 A HOH 45 3 HOH HOH 45 A HOH 1 3 HOH HOH 280 A HOH 52 3 HOH HOH 281 A HOH 53 3 HOH HOH 282 A HOH 54 3 HOH HOH 283 A HOH 55 3 HOH HOH 284 A HOH 56 3 HOH HOH 285 A HOH 57 3 HOH HOH 286 A HOH 58 3 HOH HOH 287 A HOH 59 3 HOH HOH 288 A HOH 60 3 HOH HOH 289 A HOH 61 3 HOH HOH 290 A HOH 62 3 HOH HOH 291 A HOH 63 3 HOH HOH 292 A HOH 64 3 HOH HOH 293 A HOH 65 3 HOH HOH 294 A HOH 66 3 HOH HOH 295 A HOH 67 3 HOH HOH 296 A HOH 68 3 HOH HOH 297 A HOH 69 3 HOH HOH 298 A HOH 70 3 HOH HOH 299 A HOH 71 3 HOH HOH 300 A HOH 72 3 HOH HOH 301 A HOH 73 3 HOH HOH 302 A HOH 74 3 HOH HOH 303 A HOH 75 3 HOH HOH 304 A HOH 76 3 HOH HOH 305 A HOH 77 3 HOH HOH 306 A HOH 78 3 HOH HOH 307 A HOH 79 3 HOH HOH 308 A HOH 80 3 HOH HOH 309 A HOH 81 3 HOH HOH 310 A HOH 82 3 HOH HOH 311 A HOH 83 3 HOH HOH 312 A HOH 84 3 HOH HOH 313 A HOH 85 3 HOH HOH 314 A HOH 86 3 HOH HOH 315 A HOH 87 3 HOH HOH 316 A HOH 88 3 HOH HOH 317 A HOH 89 3 HOH HOH 318 A HOH 90 3 HOH HOH 319 A HOH 91 3 HOH HOH 320 A HOH 92 3 HOH HOH 321 A HOH 93 3 HOH HOH 322 A HOH 94 3 HOH HOH 323 A HOH 95 3 HOH HOH 324 A HOH 96 3 HOH HOH 325 A HOH 97 3 HOH HOH 326 A HOH 98 3 HOH HOH 327 A HOH 99 3 HOH HOH 328 A HOH 100 3 HOH HOH 329 A HOH 101 3 HOH HOH 330 A HOH 102 3 HOH HOH 331 A HOH 103 3 HOH HOH 332 A HOH 104 3 HOH HOH 333 A HOH 105 3 HOH HOH 334 A HOH 106 3 HOH HOH 335 A HOH 107 3 HOH HOH 336 A HOH 108 3 HOH HOH 337 A HOH 109 3 HOH HOH 338 A HOH 110 3 HOH HOH 339 A HOH 111 3 HOH HOH 340 A HOH 112 3 HOH HOH 341 A HOH 113 3 HOH HOH 342 A HOH 114 3 HOH HOH 343 A HOH 115 3 HOH HOH 344 A HOH 116 3 HOH HOH 345 A HOH 117 3 HOH HOH 346 A HOH 118 3 HOH HOH 347 A HOH 119 3 HOH HOH 348 A HOH 120 3 HOH HOH 349 A HOH 121 3 HOH HOH 350 A HOH 122 3 HOH HOH 351 A HOH 123 3 HOH HOH 352 A HOH 124 3 HOH HOH 353 A HOH 125 3 HOH HOH 354 A HOH 126 3 HOH HOH 355 A HOH 127 3 HOH HOH 356 A HOH 128 3 HOH HOH 357 A HOH 129 3 HOH HOH 358 A HOH 130 3 HOH HOH 359 A HOH 131 3 HOH HOH 360 A HOH 132 3 HOH HOH 361 A HOH 133 3 HOH HOH 362 A HOH 134 3 HOH HOH 363 A HOH 135 3 HOH HOH 364 A HOH 136 3 HOH HOH 365 A HOH 137 3 HOH HOH 366 A HOH 138 3 HOH HOH 367 A HOH 139 3 HOH HOH 368 A HOH 140 3 HOH HOH 369 A HOH 141 3 HOH HOH 370 A HOH 46 3 HOH HOH 371 A HOH 47 3 HOH HOH 372 A HOH 48 3 HOH HOH 373 A HOH 49 3 HOH HOH 374 A HOH 50 3 HOH HOH 375 A HOH 51 3 HOH HOH 376 A n 1 46 A n 2 47 A n 3 48 A n 4 49 A n 5 50 A n 6 51 A ARG 52 n 7 ARG 52 A ASP 53 n 8 ASP 53 A ARG 54 n 9 ARG 54 A HIS 55 n 10 HIS 55 A ARG 56 n 11 ARG 56 A THR 57 n 12 THR 57 A ILE 58 n 13 ILE 58 A VAL 59 n 14 VAL 59 A VAL 60 n 15 VAL 60 A GLY 61 n 16 GLY 61 A GLY 62 n 17 GLY 62 A ASP 63 n 18 ASP 63 A ARG 64 n 19 ARG 64 A ASP 65 n 20 ASP 65 A TYR 66 n 21 TYR 66 A PRO 67 n 22 PRO 67 A PRO 68 n 23 PRO 68 A TYR 69 n 24 TYR 69 A GLU 70 n 25 GLU 70 A PHE 71 n 26 PHE 71 A ILE 72 n 27 ILE 72 A ASP 73 n 28 ASP 73 A GLN 74 n 29 GLN 74 A ASN 75 n 30 ASN 75 A GLY 76 n 31 GLY 76 A LYS 77 n 32 LYS 77 A PRO 78 n 33 PRO 78 A ALA 79 n 34 ALA 79 A GLY 80 n 35 GLY 80 A TYR 81 n 36 TYR 81 A ASN 82 n 37 ASN 82 A VAL 83 n 38 VAL 83 A GLU 84 n 39 GLU 84 A LEU 85 n 40 LEU 85 A THR 86 n 41 THR 86 A ARG 87 n 42 ARG 87 A ALA 88 n 43 ALA 88 A ILE 89 n 44 ILE 89 A ALA 90 n 45 ALA 90 A GLU 91 n 46 GLU 91 A VAL 92 n 47 VAL 92 A MET 93 n 48 MET 93 A GLY 94 n 49 GLY 94 A MET 95 n 50 MET 95 A THR 96 n 51 THR 96 A VAL 97 n 52 VAL 97 A GLU 98 n 53 GLU 98 A PHE 99 n 54 PHE 99 A ARG 100 n 55 ARG 100 A LEU 101 n 56 LEU 101 A GLY 102 n 57 GLY 102 A ALA 103 n 58 ALA 103 A TRP 104 n 59 TRP 104 A SER 105 n 60 SER 105 A GLU 106 n 61 GLU 106 A MET 107 n 62 MET 107 A PHE 108 n 63 PHE 108 A SER 109 n 64 SER 109 A ALA 110 n 65 ALA 110 A LEU 111 n 66 LEU 111 A LYS 112 n 67 LYS 112 A SER 113 n 68 SER 113 A GLY 114 n 69 GLY 114 A ARG 115 n 70 ARG 115 A VAL 116 n 71 VAL 116 A ASP 117 n 72 ASP 117 A VAL 118 n 73 VAL 118 A LEU 119 n 74 LEU 119 A GLN 120 n 75 GLN 120 A GLY 121 n 76 GLY 121 A ILE 122 n 77 ILE 122 A SER 123 n 78 SER 123 A TRP 124 n 79 TRP 124 A SER 125 n 80 SER 125 A GLU 126 n 81 GLU 126 A LYS 127 n 82 LYS 127 A ARG 128 n 83 ARG 128 A ALA 129 n 84 ALA 129 A ARG 130 n 85 ARG 130 A GLN 131 n 86 GLN 131 A ILE 132 n 87 ILE 132 A ASP 133 n 88 ASP 133 A PHE 134 n 89 PHE 134 A THR 135 n 90 THR 135 A PRO 136 n 91 PRO 136 A PRO 137 n 92 PRO 137 A HIS 138 n 93 HIS 138 A THR 139 n 94 THR 139 A ILE 140 n 95 ILE 140 A VAL 141 n 96 VAL 141 A TYR 142 n 97 TYR 142 A HIS 143 n 98 HIS 143 A ALA 144 n 99 ALA 144 A ILE 145 n 100 ILE 145 A PHE 146 n 101 PHE 146 A ALA 147 n 102 ALA 147 A ARG 148 n 103 ARG 148 A ARG 149 n 104 ARG 149 A ASP 150 n 105 ASP 150 A SER 151 n 106 SER 151 A PRO 152 n 107 PRO 152 A PRO 153 n 108 PRO 153 A ALA 154 n 109 ALA 154 A ALA 155 n 110 ALA 155 A GLY 156 n 111 GLY 156 A LEU 157 n 112 LEU 157 A GLU 158 n 113 GLU 158 A ASP 159 n 114 ASP 159 A LEU 160 n 115 LEU 160 A ARG 161 n 116 ARG 161 A GLY 162 n 117 GLY 162 A ARG 163 n 118 ARG 163 A LYS 164 n 119 LYS 164 A VAL 165 n 120 VAL 165 A ALA 166 n 121 ALA 166 A LEU 167 n 122 LEU 167 A HIS 168 n 123 HIS 168 A ARG 169 n 124 ARG 169 A ASP 170 n 125 ASP 170 A GLY 171 n 126 GLY 171 A ILE 172 n 127 ILE 172 A MET 173 n 128 MET 173 A HIS 174 n 129 HIS 174 A GLU 175 n 130 GLU 175 A TYR 176 n 131 TYR 176 A LEU 177 n 132 LEU 177 A ALA 178 n 133 ALA 178 A GLU 179 n 134 GLU 179 A ARG 180 n 135 ARG 180 A GLY 181 n 136 GLY 181 A TYR 182 n 137 TYR 182 A GLY 183 n 138 GLY 183 A LYS 184 n 139 LYS 184 A ASP 185 n 140 ASP 185 A LEU 186 n 141 LEU 186 A VAL 187 n 142 VAL 187 A LEU 188 n 143 LEU 188 A THR 189 n 144 THR 189 A PRO 190 n 145 PRO 190 A THR 191 n 146 THR 191 A PRO 192 n 147 PRO 192 A ALA 193 n 148 ALA 193 A ASP 194 n 149 ASP 194 A ALA 195 n 150 ALA 195 A LEU 196 n 151 LEU 196 A ARG 197 n 152 ARG 197 A LEU 198 n 153 LEU 198 A LEU 199 n 154 LEU 199 A ALA 200 n 155 ALA 200 A ALA 201 n 156 ALA 201 A GLY 202 n 157 GLY 202 A GLY 203 n 158 GLY 203 A CYS 204 n 159 CYS 204 A ASP 205 n 160 ASP 205 A TYR 206 n 161 TYR 206 A ALA 207 n 162 ALA 207 A VAL 208 n 163 VAL 208 A VAL 209 n 164 VAL 209 A ALA 210 n 165 ALA 210 A MET 211 n 166 MET 211 A VAL 212 n 167 VAL 212 A PRO 213 n 168 PRO 213 A GLY 214 n 169 GLY 214 A MET 215 n 170 MET 215 A TYR 216 n 171 TYR 216 A ILE 217 n 172 ILE 217 A ILE 218 n 173 ILE 218 A ARG 219 n 174 ARG 219 A GLU 220 n 175 GLU 220 A ASN 221 n 176 ASN 221 A ARG 222 n 177 ARG 222 A LEU 223 n 178 LEU 223 A THR 224 n 179 THR 224 A ASN 225 n 180 ASN 225 A LEU 226 n 181 LEU 226 A VAL 227 n 182 VAL 227 A PRO 228 n 183 PRO 228 A VAL 229 n 184 VAL 229 A ALA 230 n 185 ALA 230 A ARG 231 n 186 ARG 231 A SER 232 n 187 SER 232 A ILE 233 n 188 ILE 233 A ALA 234 n 189 ALA 234 A ALA 235 n 190 ALA 235 A GLN 236 n 191 GLN 236 A ARG 237 n 192 ARG 237 A TYR 238 n 193 TYR 238 A GLY 239 n 194 GLY 239 A TYR 240 n 195 TYR 240 A ALA 241 n 196 ALA 241 A VAL 242 n 197 VAL 242 A ARG 243 n 198 ARG 243 A GLN 244 n 199 GLN 244 A GLY 245 n 200 GLY 245 A ASP 246 n 201 ASP 246 A ALA 247 n 202 ALA 247 A GLU 248 n 203 GLU 248 A LEU 249 n 204 LEU 249 A LEU 250 n 205 LEU 250 A ALA 251 n 206 ALA 251 A ARG 252 n 207 ARG 252 A PHE 253 n 208 PHE 253 A SER 254 n 209 SER 254 A GLU 255 n 210 GLU 255 A GLY 256 n 211 GLY 256 A LEU 257 n 212 LEU 257 A ALA 258 n 213 ALA 258 A ILE 259 n 214 ILE 259 A LEU 260 n 215 LEU 260 A ARG 261 n 216 ARG 261 A LYS 262 n 217 LYS 262 A THR 263 n 218 THR 263 A GLY 264 n 219 GLY 264 A GLN 265 n 220 GLN 265 A TYR 266 n 221 TYR 266 A GLU 267 n 222 GLU 267 A ALA 268 n 223 ALA 268 A ILE 269 n 224 ILE 269 A ARG 270 n 225 ARG 270 A ALA 271 n 226 ALA 271 A LYS 272 n 227 LYS 272 A TRP 273 n 228 TRP 273 A LEU 274 n 229 LEU 274 A GLY 275 n 230 GLY 275 A VAL 276 n 231 VAL 276 A LEU 277 n 232 LEU 277 A GLU 278 n 233 GLU 278 A PRO 279 n 234 PRO 279 A author_and_software_defined_assembly PISA 1 monomeric A ALA 129 A O ALA 84 1_555 A NA 1 B NA NA 1_555 A ASP 133 A OD1 ASP 88 1_555 114.9 A ALA 129 A O ALA 84 1_555 A NA 1 B NA NA 1_555 A GLN 244 A OE1 GLN 199 1_555 65.1 A ASP 133 A OD1 ASP 88 1_555 A NA 1 B NA NA 1_555 A GLN 244 A OE1 GLN 199 1_555 60.0 A ALA 129 A O ALA 84 1_555 A NA 1 B NA NA 1_555 A HOH 304 C O HOH 1_555 81.2 A ASP 133 A OD1 ASP 88 1_555 A NA 1 B NA NA 1_555 A HOH 304 C O HOH 1_555 107.8 A GLN 244 A OE1 GLN 199 1_555 A NA 1 B NA NA 1_555 A HOH 304 C O HOH 1_555 69.0 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O GLU 98 A O GLU 53 A N VAL 60 A N VAL 15 A N GLY 61 A N GLY 16 A O VAL 118 A O VAL 73 A N LEU 119 A N LEU 74 A O ALA 241 A O ALA 196 A O ALA 230 A O ALA 185 A N ILE 145 A N ILE 100 A N PHE 146 A N PHE 101 A O ALA 207 A O ALA 162 A O TYR 206 A O TYR 161 A N ALA 166 A N ALA 121 A N LEU 167 A N LEU 122 A O THR 189 A O THR 144 A N TYR 66 A N TYR 21 A O GLU 70 A O GLU 25 A N PHE 71 A N PHE 26 A O ALA 79 A O ALA 34 1 A GLY 46 A GLY 1 1 Y 1 A SER 47 A SER 2 1 Y 1 A ALA 48 A ALA 3 1 Y 1 A ASP 49 A ASP 4 1 Y 1 A ALA 50 A ALA 5 1 Y 1 A PRO 51 A PRO 6 1 Y 1 A THR 57 -39.63 125.63 1 A SER 105 -62.99 2.49 1 A SER 151 -29.68 154.11 1 A ARG 169 -54.64 96.98 1 A GLU 179 -54.84 5.80 1 A ASP 185 -87.78 32.39 1 A SER 232 27.86 34.41 1 A ALA 247 -35.58 -24.77 protein_rep.param protein.top water_rep.param ion.top ion.param water.top 55.100 -2.990 2.060 0.000 -2.990 0.000 5.980 0.285 0.011 0.228 2.400 19.870 735 14682 5.000 99.800 RANDOM 1761706.125 0.000 1 RESTRAINED THROUGHOUT 0.00 MAD FLAT MODEL 46.846 0.306 0.460 0.340 5.000 0.390 0.320 2.400 19.870 141 1951 1 0 1809 0.010 1.600 22.700 0.930 4.170 1.500 5.950 2.000 6.560 2.000 8.360 2.500 0.374 0.036 0.306 2.550 108 2280 2388 6 4.500 100.000 2.400 20.000 3H7M 14718 0.046 1.030 1 14.700 5.100 100.000 0.419 2.40 2.49 1434 1.053 4.20 99.90 0.331 2.49 2.58 1438 1.053 4.30 100.00 0.247 2.58 2.70 1425 1.035 4.30 100.00 0.171 2.70 2.84 1460 1.021 4.30 100.00 0.116 2.84 3.02 1444 1.033 4.30 99.90 0.087 3.02 3.25 1459 1.020 4.40 99.90 0.059 3.25 3.58 1459 1.042 4.70 99.80 0.043 3.58 4.09 1492 1.022 5.60 100.00 0.034 4.09 5.14 1503 0.994 7.10 99.90 0.031 5.14 20.00 1604 1.047 7.20 100.00 data reduction Zbyszek Otwinowski zbyszek@mix.swmed.edu http://www.lnls.br/infra/linhasluz/denzo-hkl.htm DENZO package data scaling Zbyszek Otwinowski zbyszek@mix.swmed.edu http://www.lnls.br/infra/linhasluz/denzo-hkl.htm SCALEPACK package phasing de La Fortelle sharp-develop@globalphasing.com http://babinet.globalphasing.com/sharp/ SHARP package phasing K. Cowtan ccp4@dl.ac.uk Fortran_77 http://www.ccp4.ac.uk/main.html DM program refinement Axel T. Brunger axel.brunger@yale.edu Fortran_77 http://cns.csb.yale.edu/v1.1/ CNS package 1.1 data extraction PDB sw-help@rcsb.rutgers.edu September 10, 2007 C++ http://pdb.rutgers.edu/software/ PDB_EXTRACT package 3.004 Crystal Structure of a Histidine Kinase Sensor Domain with Similarity to Periplasmic Binding Proteins 1 N N 2 N N 3 N N A GLY 80 A GLY 35 HELX_P A GLY 94 A GLY 49 1 1 15 A ALA 103 A ALA 58 HELX_P A SER 105 A SER 60 5 2 3 A GLU 106 A GLU 61 HELX_P A SER 113 A SER 68 1 3 8 A SER 125 A SER 80 HELX_P A ARG 130 A ARG 85 1 4 6 A GLY 156 A GLY 111 HELX_P A ARG 161 A ARG 116 5 5 6 A GLY 171 A GLY 126 HELX_P A GLU 179 A GLU 134 1 6 9 A ARG 180 A ARG 135 HELX_P A GLY 181 A GLY 136 5 7 2 A TYR 182 A TYR 137 HELX_P A LYS 184 A LYS 139 5 8 3 A THR 191 A THR 146 HELX_P A ALA 201 A ALA 156 1 9 11 A MET 211 A MET 166 HELX_P A ASN 221 A ASN 176 1 10 11 A ASP 246 A ASP 201 HELX_P A GLY 264 A GLY 219 1 11 19 A GLY 264 A GLY 219 HELX_P A TRP 273 A TRP 228 1 12 10 metalc 2.758 A NA 1 B NA NA 1_555 A ALA 129 A O ALA 84 1_555 metalc 2.656 A NA 1 B NA NA 1_555 A ASP 133 A OD1 ASP 88 1_555 metalc 2.871 A NA 1 B NA NA 1_555 A GLN 244 A OE1 GLN 199 1_555 metalc 2.986 A NA 1 B NA NA 1_555 A HOH 304 C O HOH 1_555 TRANSFERASE histidine kinase sensor domain, Kinase, Phosphoprotein, Transferase A PRO 67 A PRO 22 1 A PRO 68 A PRO 23 0.02 Q749I7_GEOSL UNP 1 52 Q749I7 RDRHRTIVVGGDRDYPPYEFIDQNGKPAGYNVELTRAIAEVMGMTVEFRLGAWSEMFSALKSGRVDVLQGISWSEKRARQ IDFTPPHTIVYHAIFARRDSPPAAGLEDLRGRKVALHRDGIMHEYLAERGYGKDLVLTPTPADALRLLAAGGCDYAVVAM VPGMYIIRENRLTNLVPVARSIAAQRYGYAVRQGDAELLARFSEGLAILRKTGQYEAIRAKWLGVLEP 48 279 3H7M 48 279 Q749I7 A 1 3 234 1 expression tag GLY 46 3H7M A Q749I7 UNP 1 1 expression tag SER 47 3H7M A Q749I7 UNP 2 8 3 parallel parallel anti-parallel anti-parallel anti-parallel parallel parallel anti-parallel anti-parallel A VAL 97 A VAL 52 A GLY 102 A GLY 57 A ILE 58 A ILE 13 A ASP 63 A ASP 18 A VAL 118 A VAL 73 A SER 123 A SER 78 A LEU 226 A LEU 181 A ARG 243 A ARG 198 A ILE 132 A ILE 87 A ARG 148 A ARG 103 A TYR 206 A TYR 161 A ALA 210 A ALA 165 A VAL 165 A VAL 120 A HIS 168 A HIS 123 A LEU 186 A LEU 141 A THR 189 A THR 144 A ASP 65 A ASP 20 A TYR 66 A TYR 21 A GLU 70 A GLU 25 A ILE 72 A ILE 27 A PRO 78 A PRO 33 A ALA 79 A ALA 34 BINDING SITE FOR RESIDUE NA A 1 A NA 1 Software 5 A ALA 129 A ALA 84 5 1_555 A ILE 132 A ILE 87 5 1_555 A ASP 133 A ASP 88 5 1_555 A GLN 244 A GLN 199 5 1_555 A HOH 304 C HOH 5 1_555 179 P 65 2 2