0.021023
0.000000
0.008475
0.000000
0.015008
0.000000
0.000000
0.000000
0.019816
0.000000
0.000000
0.000000
Joint Center for Structural Genomics (JCSG)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.000
111.960
90.000
47.567
66.631
54.412
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cl -1
35.453
CHLORIDE ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
Fe 3
55.845
FE (III) ION
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
K 1
39.098
POTASSIUM ION
non-polymer
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be published
0353
Crystal structure of HDOD domain protein with unknown function (NP_953345.1) from GEOBACTER SULFURREDUCENS at 1.90 A resolution
10.2210/pdb3hc1/pdb
pdb_00003hc1
100
1
Flat collimating mirror, toroid focusing mirror
CCD
2009-03-19
MARMOSAIC 325 mm CCD
Double crystal monochromator
MAD
M
x-ray
1
0.91837
1.0
0.97932
1.0
0.97911
1.0
BL9-2
SSRL
0.91837,0.97932,0.97911
SYNCHROTRON
SSRL BEAMLINE BL9-2
33972.445
uncharacterized HDOD domain protein
1
man
polymer
55.845
FE (III) ION
2
syn
non-polymer
35.453
CHLORIDE ION
1
syn
non-polymer
39.098
POTASSIUM ION
1
syn
non-polymer
92.094
GLYCEROL
4
syn
non-polymer
18.015
water
165
nat
water
HD domain protein
no
yes
G(MSE)DISGRDVETRLTLAREF(MSE)SGVDELPTVPDIVLRIAGKLNDPDVAIDEVADLLLQDQVLTARVVHLANSPL
YSAARPISSIRDAVIYLGLDLLREAIFTCAIVDLFKTGKGPLNRSTLWAHSLGVARIAKLIAERTGFLNPVNVYVAGLLH
DVGEVFINFFRGKEFSQVVTLVDEEKITFGQAEERLFGTSHCEVGFALAKRWSLNEFICDTILYHHDIEAVPYKQAAIVA
(MSE)VAFADEYCTLRRLGFEGHKPVDSVRTLLENHPSWGVIRRSLGGSDFDEKLIVAELDSSIVEIRAAVDELFLL
GMDISGRDVETRLTLAREFMSGVDELPTVPDIVLRIAGKLNDPDVAIDEVADLLLQDQVLTARVVHLANSPLYSAARPIS
SIRDAVIYLGLDLLREAIFTCAIVDLFKTGKGPLNRSTLWAHSLGVARIAKLIAERTGFLNPVNVYVAGLLHDVGEVFIN
FFRGKEFSQVVTLVDEEKITFGQAEERLFGTSHCEVGFALAKRWSLNEFICDTILYHHDIEAVPYKQAAIVAMVAFADEY
CTLRRLGFEGHKPVDSVRTLLENHPSWGVIRRSLGGSDFDEKLIVAELDSSIVEIRAAVDELFLL
A
394418
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
GSU2296, NP_953345.1
35554
Geobacter sulfurreducens
562
Escherichia Coli
HK100
Plasmid
SpeedET
1
2.35
47.75
VAPOR DIFFUSION, SITTING DROP
7.0
0.2000M KThioCyanate, 20.0000% PEG-3350, No Buffer pH 7.0, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K
277
Joint Center for Structural Genomics
JCSG
PSI, Protein Structure Initiative
pdbx_struct_assembly_auth_evidence
software
software
struct_conn
database_2
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Advisory
Version format compliance
Author supporting evidence
Refinement description
Data collection
Derived calculations
Refinement description
Database references
Derived calculations
1
0
2009-06-02
1
1
2011-07-13
1
2
2017-10-25
1
3
2019-07-24
1
4
2023-02-01
_software.classification
_software.name
_software.classification
_software.contact_author
_software.contact_author_email
_software.language
_software.location
_software.name
_software.type
_software.version
_struct_conn.pdbx_leaving_atom_flag
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
RCSB
Y
RCSB
2009-05-05
REL
REL
FE
FE (III) ION
CL
CHLORIDE ION
K
POTASSIUM ION
GOL
GLYCEROL
HOH
water
THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE.
FE
1
2
FE
FE
305
A
FE
2
2
FE
FE
306
A
CL
3
3
CL
CL
307
A
K
4
4
K
K
308
A
GOL
5
5
GOL
GOL
309
A
GOL
6
5
GOL
GOL
310
A
GOL
7
5
GOL
GOL
311
A
GOL
8
5
GOL
GOL
312
A
HOH
9
6
HOH
HOH
313
A
HOH
10
6
HOH
HOH
314
A
HOH
11
6
HOH
HOH
315
A
HOH
12
6
HOH
HOH
316
A
HOH
13
6
HOH
HOH
317
A
HOH
14
6
HOH
HOH
318
A
HOH
15
6
HOH
HOH
319
A
HOH
16
6
HOH
HOH
320
A
HOH
17
6
HOH
HOH
321
A
HOH
18
6
HOH
HOH
322
A
HOH
19
6
HOH
HOH
323
A
HOH
20
6
HOH
HOH
324
A
HOH
21
6
HOH
HOH
325
A
HOH
22
6
HOH
HOH
326
A
HOH
23
6
HOH
HOH
327
A
HOH
24
6
HOH
HOH
328
A
HOH
25
6
HOH
HOH
329
A
HOH
26
6
HOH
HOH
330
A
HOH
27
6
HOH
HOH
331
A
HOH
28
6
HOH
HOH
332
A
HOH
29
6
HOH
HOH
333
A
HOH
30
6
HOH
HOH
334
A
HOH
31
6
HOH
HOH
335
A
HOH
32
6
HOH
HOH
336
A
HOH
33
6
HOH
HOH
337
A
HOH
34
6
HOH
HOH
338
A
HOH
35
6
HOH
HOH
339
A
HOH
36
6
HOH
HOH
340
A
HOH
37
6
HOH
HOH
341
A
HOH
38
6
HOH
HOH
342
A
HOH
39
6
HOH
HOH
343
A
HOH
40
6
HOH
HOH
344
A
HOH
41
6
HOH
HOH
345
A
HOH
42
6
HOH
HOH
346
A
HOH
43
6
HOH
HOH
347
A
HOH
44
6
HOH
HOH
348
A
HOH
45
6
HOH
HOH
349
A
HOH
46
6
HOH
HOH
350
A
HOH
47
6
HOH
HOH
351
A
HOH
48
6
HOH
HOH
352
A
HOH
49
6
HOH
HOH
353
A
HOH
50
6
HOH
HOH
354
A
HOH
51
6
HOH
HOH
355
A
HOH
52
6
HOH
HOH
356
A
HOH
53
6
HOH
HOH
357
A
HOH
54
6
HOH
HOH
358
A
HOH
55
6
HOH
HOH
359
A
HOH
56
6
HOH
HOH
360
A
HOH
57
6
HOH
HOH
361
A
HOH
58
6
HOH
HOH
362
A
HOH
59
6
HOH
HOH
363
A
HOH
60
6
HOH
HOH
364
A
HOH
61
6
HOH
HOH
365
A
HOH
62
6
HOH
HOH
366
A
HOH
63
6
HOH
HOH
367
A
HOH
64
6
HOH
HOH
368
A
HOH
65
6
HOH
HOH
369
A
HOH
66
6
HOH
HOH
370
A
HOH
67
6
HOH
HOH
371
A
HOH
68
6
HOH
HOH
372
A
HOH
69
6
HOH
HOH
373
A
HOH
70
6
HOH
HOH
374
A
HOH
71
6
HOH
HOH
375
A
HOH
72
6
HOH
HOH
376
A
HOH
73
6
HOH
HOH
377
A
HOH
74
6
HOH
HOH
378
A
HOH
75
6
HOH
HOH
379
A
HOH
76
6
HOH
HOH
380
A
HOH
77
6
HOH
HOH
381
A
HOH
78
6
HOH
HOH
382
A
HOH
79
6
HOH
HOH
383
A
HOH
80
6
HOH
HOH
384
A
HOH
81
6
HOH
HOH
385
A
HOH
82
6
HOH
HOH
386
A
HOH
83
6
HOH
HOH
387
A
HOH
84
6
HOH
HOH
388
A
HOH
85
6
HOH
HOH
389
A
HOH
86
6
HOH
HOH
390
A
HOH
87
6
HOH
HOH
391
A
HOH
88
6
HOH
HOH
392
A
HOH
89
6
HOH
HOH
393
A
HOH
90
6
HOH
HOH
394
A
HOH
91
6
HOH
HOH
395
A
HOH
92
6
HOH
HOH
396
A
HOH
93
6
HOH
HOH
397
A
HOH
94
6
HOH
HOH
398
A
HOH
95
6
HOH
HOH
399
A
HOH
96
6
HOH
HOH
400
A
HOH
97
6
HOH
HOH
401
A
HOH
98
6
HOH
HOH
402
A
HOH
99
6
HOH
HOH
403
A
HOH
100
6
HOH
HOH
404
A
HOH
101
6
HOH
HOH
405
A
HOH
102
6
HOH
HOH
406
A
HOH
103
6
HOH
HOH
407
A
HOH
104
6
HOH
HOH
408
A
HOH
105
6
HOH
HOH
409
A
HOH
106
6
HOH
HOH
410
A
HOH
107
6
HOH
HOH
411
A
HOH
108
6
HOH
HOH
412
A
HOH
109
6
HOH
HOH
413
A
HOH
110
6
HOH
HOH
414
A
HOH
111
6
HOH
HOH
415
A
HOH
112
6
HOH
HOH
416
A
HOH
113
6
HOH
HOH
417
A
HOH
114
6
HOH
HOH
418
A
HOH
115
6
HOH
HOH
419
A
HOH
116
6
HOH
HOH
420
A
HOH
117
6
HOH
HOH
421
A
HOH
118
6
HOH
HOH
422
A
HOH
119
6
HOH
HOH
423
A
HOH
120
6
HOH
HOH
424
A
HOH
121
6
HOH
HOH
425
A
HOH
122
6
HOH
HOH
426
A
HOH
123
6
HOH
HOH
427
A
HOH
124
6
HOH
HOH
428
A
HOH
125
6
HOH
HOH
429
A
HOH
126
6
HOH
HOH
430
A
HOH
127
6
HOH
HOH
431
A
HOH
128
6
HOH
HOH
432
A
HOH
129
6
HOH
HOH
433
A
HOH
130
6
HOH
HOH
434
A
HOH
131
6
HOH
HOH
435
A
HOH
132
6
HOH
HOH
436
A
HOH
133
6
HOH
HOH
437
A
HOH
134
6
HOH
HOH
438
A
HOH
135
6
HOH
HOH
439
A
HOH
136
6
HOH
HOH
440
A
HOH
137
6
HOH
HOH
441
A
HOH
138
6
HOH
HOH
442
A
HOH
139
6
HOH
HOH
443
A
HOH
140
6
HOH
HOH
444
A
HOH
141
6
HOH
HOH
445
A
HOH
142
6
HOH
HOH
446
A
HOH
143
6
HOH
HOH
447
A
HOH
144
6
HOH
HOH
448
A
HOH
145
6
HOH
HOH
449
A
HOH
146
6
HOH
HOH
450
A
HOH
147
6
HOH
HOH
451
A
HOH
148
6
HOH
HOH
452
A
HOH
149
6
HOH
HOH
453
A
HOH
150
6
HOH
HOH
454
A
HOH
151
6
HOH
HOH
455
A
HOH
152
6
HOH
HOH
456
A
HOH
153
6
HOH
HOH
457
A
HOH
154
6
HOH
HOH
458
A
HOH
155
6
HOH
HOH
459
A
HOH
156
6
HOH
HOH
460
A
HOH
157
6
HOH
HOH
461
A
HOH
158
6
HOH
HOH
462
A
HOH
159
6
HOH
HOH
463
A
HOH
160
6
HOH
HOH
464
A
HOH
161
6
HOH
HOH
465
A
HOH
162
6
HOH
HOH
466
A
HOH
163
6
HOH
HOH
467
A
HOH
164
6
HOH
HOH
468
A
HOH
165
6
HOH
HOH
469
A
HOH
166
6
HOH
HOH
470
A
HOH
167
6
HOH
HOH
471
A
HOH
168
6
HOH
HOH
472
A
HOH
169
6
HOH
HOH
473
A
HOH
170
6
HOH
HOH
474
A
HOH
171
6
HOH
HOH
475
A
HOH
172
6
HOH
HOH
476
A
HOH
173
6
HOH
HOH
477
A
n
1
0
A
n
2
1
A
n
3
2
A
n
4
3
A
n
5
4
A
n
6
5
A
n
7
6
A
ASP
7
n
8
ASP
7
A
VAL
8
n
9
VAL
8
A
GLU
9
n
10
GLU
9
A
THR
10
n
11
THR
10
A
ARG
11
n
12
ARG
11
A
LEU
12
n
13
LEU
12
A
THR
13
n
14
THR
13
A
LEU
14
n
15
LEU
14
A
ALA
15
n
16
ALA
15
A
ARG
16
n
17
ARG
16
A
GLU
17
n
18
GLU
17
A
PHE
18
n
19
PHE
18
A
MSE
19
n
20
MSE
19
A
SER
20
n
21
SER
20
A
GLY
21
n
22
GLY
21
A
VAL
22
n
23
VAL
22
A
ASP
23
n
24
ASP
23
A
GLU
24
n
25
GLU
24
A
LEU
25
n
26
LEU
25
A
PRO
26
n
27
PRO
26
A
THR
27
n
28
THR
27
A
VAL
28
n
29
VAL
28
A
PRO
29
n
30
PRO
29
A
ASP
30
n
31
ASP
30
A
ILE
31
n
32
ILE
31
A
VAL
32
n
33
VAL
32
A
LEU
33
n
34
LEU
33
A
ARG
34
n
35
ARG
34
A
ILE
35
n
36
ILE
35
A
ALA
36
n
37
ALA
36
A
GLY
37
n
38
GLY
37
A
LYS
38
n
39
LYS
38
A
LEU
39
n
40
LEU
39
A
ASN
40
n
41
ASN
40
A
ASP
41
n
42
ASP
41
A
PRO
42
n
43
PRO
42
A
ASP
43
n
44
ASP
43
A
VAL
44
n
45
VAL
44
A
ALA
45
n
46
ALA
45
A
ILE
46
n
47
ILE
46
A
ASP
47
n
48
ASP
47
A
GLU
48
n
49
GLU
48
A
VAL
49
n
50
VAL
49
A
ALA
50
n
51
ALA
50
A
ASP
51
n
52
ASP
51
A
LEU
52
n
53
LEU
52
A
LEU
53
n
54
LEU
53
A
LEU
54
n
55
LEU
54
A
GLN
55
n
56
GLN
55
A
ASP
56
n
57
ASP
56
A
GLN
57
n
58
GLN
57
A
VAL
58
n
59
VAL
58
A
LEU
59
n
60
LEU
59
A
THR
60
n
61
THR
60
A
ALA
61
n
62
ALA
61
A
ARG
62
n
63
ARG
62
A
VAL
63
n
64
VAL
63
A
VAL
64
n
65
VAL
64
A
HIS
65
n
66
HIS
65
A
LEU
66
n
67
LEU
66
A
ALA
67
n
68
ALA
67
A
ASN
68
n
69
ASN
68
A
SER
69
n
70
SER
69
A
PRO
70
n
71
PRO
70
A
LEU
71
n
72
LEU
71
A
TYR
72
n
73
TYR
72
A
SER
73
n
74
SER
73
A
ALA
74
n
75
ALA
74
A
ALA
75
n
76
ALA
75
A
ARG
76
n
77
ARG
76
A
PRO
77
n
78
PRO
77
A
ILE
78
n
79
ILE
78
A
SER
79
n
80
SER
79
A
SER
80
n
81
SER
80
A
ILE
81
n
82
ILE
81
A
ARG
82
n
83
ARG
82
A
ASP
83
n
84
ASP
83
A
ALA
84
n
85
ALA
84
A
VAL
85
n
86
VAL
85
A
ILE
86
n
87
ILE
86
A
TYR
87
n
88
TYR
87
A
LEU
88
n
89
LEU
88
A
GLY
89
n
90
GLY
89
A
LEU
90
n
91
LEU
90
A
ASP
91
n
92
ASP
91
A
LEU
92
n
93
LEU
92
A
LEU
93
n
94
LEU
93
A
ARG
94
n
95
ARG
94
A
GLU
95
n
96
GLU
95
A
ALA
96
n
97
ALA
96
A
ILE
97
n
98
ILE
97
A
PHE
98
n
99
PHE
98
A
THR
99
n
100
THR
99
A
CYS
100
n
101
CYS
100
A
ALA
101
n
102
ALA
101
A
ILE
102
n
103
ILE
102
A
VAL
103
n
104
VAL
103
A
ASP
104
n
105
ASP
104
A
LEU
105
n
106
LEU
105
A
PHE
106
n
107
PHE
106
A
LYS
107
n
108
LYS
107
A
THR
108
n
109
THR
108
A
GLY
109
n
110
GLY
109
A
LYS
110
n
111
LYS
110
A
GLY
111
n
112
GLY
111
A
PRO
112
n
113
PRO
112
A
LEU
113
n
114
LEU
113
A
ASN
114
n
115
ASN
114
A
ARG
115
n
116
ARG
115
A
SER
116
n
117
SER
116
A
THR
117
n
118
THR
117
A
LEU
118
n
119
LEU
118
A
TRP
119
n
120
TRP
119
A
ALA
120
n
121
ALA
120
A
HIS
121
n
122
HIS
121
A
SER
122
n
123
SER
122
A
LEU
123
n
124
LEU
123
A
GLY
124
n
125
GLY
124
A
VAL
125
n
126
VAL
125
A
ALA
126
n
127
ALA
126
A
ARG
127
n
128
ARG
127
A
ILE
128
n
129
ILE
128
A
ALA
129
n
130
ALA
129
A
LYS
130
n
131
LYS
130
A
LEU
131
n
132
LEU
131
A
ILE
132
n
133
ILE
132
A
ALA
133
n
134
ALA
133
A
GLU
134
n
135
GLU
134
A
ARG
135
n
136
ARG
135
A
THR
136
n
137
THR
136
A
GLY
137
n
138
GLY
137
A
PHE
138
n
139
PHE
138
A
LEU
139
n
140
LEU
139
A
ASN
140
n
141
ASN
140
A
PRO
141
n
142
PRO
141
A
VAL
142
n
143
VAL
142
A
ASN
143
n
144
ASN
143
A
VAL
144
n
145
VAL
144
A
TYR
145
n
146
TYR
145
A
VAL
146
n
147
VAL
146
A
ALA
147
n
148
ALA
147
A
GLY
148
n
149
GLY
148
A
LEU
149
n
150
LEU
149
A
LEU
150
n
151
LEU
150
A
HIS
151
n
152
HIS
151
A
ASP
152
n
153
ASP
152
A
VAL
153
n
154
VAL
153
A
GLY
154
n
155
GLY
154
A
GLU
155
n
156
GLU
155
A
VAL
156
n
157
VAL
156
A
PHE
157
n
158
PHE
157
A
ILE
158
n
159
ILE
158
A
ASN
159
n
160
ASN
159
A
PHE
160
n
161
PHE
160
A
PHE
161
n
162
PHE
161
A
ARG
162
n
163
ARG
162
A
GLY
163
n
164
GLY
163
A
LYS
164
n
165
LYS
164
A
GLU
165
n
166
GLU
165
A
PHE
166
n
167
PHE
166
A
SER
167
n
168
SER
167
A
GLN
168
n
169
GLN
168
A
VAL
169
n
170
VAL
169
A
VAL
170
n
171
VAL
170
A
THR
171
n
172
THR
171
A
LEU
172
n
173
LEU
172
A
VAL
173
n
174
VAL
173
A
ASP
174
n
175
ASP
174
A
GLU
175
n
176
GLU
175
A
GLU
176
n
177
GLU
176
A
LYS
177
n
178
LYS
177
A
ILE
178
n
179
ILE
178
A
THR
179
n
180
THR
179
A
PHE
180
n
181
PHE
180
A
GLY
181
n
182
GLY
181
A
GLN
182
n
183
GLN
182
A
ALA
183
n
184
ALA
183
A
GLU
184
n
185
GLU
184
A
GLU
185
n
186
GLU
185
A
ARG
186
n
187
ARG
186
A
LEU
187
n
188
LEU
187
A
PHE
188
n
189
PHE
188
A
GLY
189
n
190
GLY
189
A
THR
190
n
191
THR
190
A
SER
191
n
192
SER
191
A
HIS
192
n
193
HIS
192
A
CYS
193
n
194
CYS
193
A
GLU
194
n
195
GLU
194
A
VAL
195
n
196
VAL
195
A
GLY
196
n
197
GLY
196
A
PHE
197
n
198
PHE
197
A
ALA
198
n
199
ALA
198
A
LEU
199
n
200
LEU
199
A
ALA
200
n
201
ALA
200
A
LYS
201
n
202
LYS
201
A
ARG
202
n
203
ARG
202
A
TRP
203
n
204
TRP
203
A
SER
204
n
205
SER
204
A
LEU
205
n
206
LEU
205
A
ASN
206
n
207
ASN
206
A
GLU
207
n
208
GLU
207
A
PHE
208
n
209
PHE
208
A
ILE
209
n
210
ILE
209
A
CYS
210
n
211
CYS
210
A
ASP
211
n
212
ASP
211
A
THR
212
n
213
THR
212
A
ILE
213
n
214
ILE
213
A
LEU
214
n
215
LEU
214
A
TYR
215
n
216
TYR
215
A
HIS
216
n
217
HIS
216
A
HIS
217
n
218
HIS
217
A
ASP
218
n
219
ASP
218
A
ILE
219
n
220
ILE
219
A
GLU
220
n
221
GLU
220
A
ALA
221
n
222
ALA
221
A
VAL
222
n
223
VAL
222
A
PRO
223
n
224
PRO
223
A
TYR
224
n
225
TYR
224
A
LYS
225
n
226
LYS
225
A
GLN
226
n
227
GLN
226
A
ALA
227
n
228
ALA
227
A
ALA
228
n
229
ALA
228
A
ILE
229
n
230
ILE
229
A
VAL
230
n
231
VAL
230
A
ALA
231
n
232
ALA
231
A
MSE
232
n
233
MSE
232
A
VAL
233
n
234
VAL
233
A
ALA
234
n
235
ALA
234
A
PHE
235
n
236
PHE
235
A
ALA
236
n
237
ALA
236
A
ASP
237
n
238
ASP
237
A
GLU
238
n
239
GLU
238
A
TYR
239
n
240
TYR
239
A
CYS
240
n
241
CYS
240
A
THR
241
n
242
THR
241
A
LEU
242
n
243
LEU
242
A
ARG
243
n
244
ARG
243
A
ARG
244
n
245
ARG
244
A
LEU
245
n
246
LEU
245
A
GLY
246
n
247
GLY
246
A
PHE
247
n
248
PHE
247
A
GLU
248
n
249
GLU
248
A
GLY
249
n
250
GLY
249
A
HIS
250
n
251
HIS
250
A
LYS
251
n
252
LYS
251
A
PRO
252
n
253
PRO
252
A
VAL
253
n
254
VAL
253
A
ASP
254
n
255
ASP
254
A
SER
255
n
256
SER
255
A
VAL
256
n
257
VAL
256
A
ARG
257
n
258
ARG
257
A
THR
258
n
259
THR
258
A
LEU
259
n
260
LEU
259
A
LEU
260
n
261
LEU
260
A
GLU
261
n
262
GLU
261
A
ASN
262
n
263
ASN
262
A
HIS
263
n
264
HIS
263
A
PRO
264
n
265
PRO
264
A
SER
265
n
266
SER
265
A
TRP
266
n
267
TRP
266
A
GLY
267
n
268
GLY
267
A
VAL
268
n
269
VAL
268
A
ILE
269
n
270
ILE
269
A
ARG
270
n
271
ARG
270
A
ARG
271
n
272
ARG
271
A
SER
272
n
273
SER
272
A
LEU
273
n
274
LEU
273
A
GLY
274
n
275
GLY
274
A
GLY
275
n
276
GLY
275
A
SER
276
n
277
SER
276
A
ASP
277
n
278
ASP
277
A
PHE
278
n
279
PHE
278
A
ASP
279
n
280
ASP
279
A
GLU
280
n
281
GLU
280
A
LYS
281
n
282
LYS
281
A
LEU
282
n
283
LEU
282
A
ILE
283
n
284
ILE
283
A
VAL
284
n
285
VAL
284
A
ALA
285
n
286
ALA
285
A
GLU
286
n
287
GLU
286
A
LEU
287
n
288
LEU
287
A
ASP
288
n
289
ASP
288
A
SER
289
n
290
SER
289
A
SER
290
n
291
SER
290
A
ILE
291
n
292
ILE
291
A
VAL
292
n
293
VAL
292
A
GLU
293
n
294
GLU
293
A
ILE
294
n
295
ILE
294
A
ARG
295
n
296
ARG
295
A
ALA
296
n
297
ALA
296
A
ALA
297
n
298
ALA
297
A
VAL
298
n
299
VAL
298
A
ASP
299
n
300
ASP
299
A
GLU
300
n
301
GLU
300
A
LEU
301
n
302
LEU
301
A
PHE
302
n
303
PHE
302
A
LEU
303
n
304
LEU
303
A
LEU
304
n
305
LEU
304
A
2.0054
-0.0966
0.0314
0.8397
0.2026
0.7802
0.0214
0.1005
0.0185
-0.0287
0.0084
-0.0422
0.0131
0.0421
-0.0298
0.0093
-0.0011
0.0029
0.0081
-0.0014
0.0032
refined
-2.2540
31.3479
21.8305
X-RAY DIFFRACTION
A
7
A
304
X-RAY DIFFRACTION
1
author_and_software_defined_assembly
PISA
1
monomeric
gel filtration
A
HIS
121
A
NE2
HIS
122
1_555
A
FE
306
C
FE
FE
1_555
A
HIS
151
A
NE2
HIS
152
1_555
88.0
A
HIS
121
A
NE2
HIS
122
1_555
A
FE
306
C
FE
FE
1_555
A
ASP
152
A
OD2
ASP
153
1_555
88.6
A
HIS
151
A
NE2
HIS
152
1_555
A
FE
306
C
FE
FE
1_555
A
ASP
152
A
OD2
ASP
153
1_555
82.2
A
HIS
121
A
NE2
HIS
122
1_555
A
FE
306
C
FE
FE
1_555
A
ASP
237
A
OD1
ASP
238
1_555
83.8
A
HIS
151
A
NE2
HIS
152
1_555
A
FE
306
C
FE
FE
1_555
A
ASP
237
A
OD1
ASP
238
1_555
97.2
A
ASP
152
A
OD2
ASP
153
1_555
A
FE
306
C
FE
FE
1_555
A
ASP
237
A
OD1
ASP
238
1_555
172.4
A
HIS
121
A
NE2
HIS
122
1_555
A
FE
306
C
FE
FE
1_555
A
GLU
248
A
OE1
GLU
249
1_555
86.8
A
HIS
151
A
NE2
HIS
152
1_555
A
FE
306
C
FE
FE
1_555
A
GLU
248
A
OE1
GLU
249
1_555
169.1
A
ASP
152
A
OD2
ASP
153
1_555
A
FE
306
C
FE
FE
1_555
A
GLU
248
A
OE1
GLU
249
1_555
88.1
A
ASP
237
A
OD1
ASP
238
1_555
A
FE
306
C
FE
FE
1_555
A
GLU
248
A
OE1
GLU
249
1_555
91.8
A
HIS
121
A
NE2
HIS
122
1_555
A
FE
306
C
FE
FE
1_555
A
HOH
318
J
O
HOH
1_555
169.0
A
HIS
151
A
NE2
HIS
152
1_555
A
FE
306
C
FE
FE
1_555
A
HOH
318
J
O
HOH
1_555
96.9
A
ASP
152
A
OD2
ASP
153
1_555
A
FE
306
C
FE
FE
1_555
A
HOH
318
J
O
HOH
1_555
101.8
A
ASP
237
A
OD1
ASP
238
1_555
A
FE
306
C
FE
FE
1_555
A
HOH
318
J
O
HOH
1_555
85.8
A
GLU
248
A
OE1
GLU
249
1_555
A
FE
306
C
FE
FE
1_555
A
HOH
318
J
O
HOH
1_555
89.9
A
ASP
152
A
OD1
ASP
153
1_555
A
FE
305
B
FE
FE
1_555
A
HIS
192
A
NE2
HIS
193
1_555
89.3
A
ASP
152
A
OD1
ASP
153
1_555
A
FE
305
B
FE
FE
1_555
A
HIS
216
A
NE2
HIS
217
1_555
92.2
A
HIS
192
A
NE2
HIS
193
1_555
A
FE
305
B
FE
FE
1_555
A
HIS
216
A
NE2
HIS
217
1_555
97.1
A
ASP
152
A
OD1
ASP
153
1_555
A
FE
305
B
FE
FE
1_555
A
HIS
217
A
NE2
HIS
218
1_555
171.5
A
HIS
192
A
NE2
HIS
193
1_555
A
FE
305
B
FE
FE
1_555
A
HIS
217
A
NE2
HIS
218
1_555
85.0
A
HIS
216
A
NE2
HIS
217
1_555
A
FE
305
B
FE
FE
1_555
A
HIS
217
A
NE2
HIS
218
1_555
82.3
A
ASP
152
A
OD1
ASP
153
1_555
A
FE
305
B
FE
FE
1_555
A
GLU
248
A
OE2
GLU
249
1_555
94.2
A
HIS
192
A
NE2
HIS
193
1_555
A
FE
305
B
FE
FE
1_555
A
GLU
248
A
OE2
GLU
249
1_555
89.8
A
HIS
216
A
NE2
HIS
217
1_555
A
FE
305
B
FE
FE
1_555
A
GLU
248
A
OE2
GLU
249
1_555
170.7
A
HIS
217
A
NE2
HIS
218
1_555
A
FE
305
B
FE
FE
1_555
A
GLU
248
A
OE2
GLU
249
1_555
92.0
A
ASP
152
A
OD1
ASP
153
1_555
A
FE
305
B
FE
FE
1_555
A
HOH
318
J
O
HOH
1_555
94.8
A
HIS
192
A
NE2
HIS
193
1_555
A
FE
305
B
FE
FE
1_555
A
HOH
318
J
O
HOH
1_555
175.5
A
HIS
216
A
NE2
HIS
217
1_555
A
FE
305
B
FE
FE
1_555
A
HOH
318
J
O
HOH
1_555
84.9
A
HIS
217
A
NE2
HIS
218
1_555
A
FE
305
B
FE
FE
1_555
A
HOH
318
J
O
HOH
1_555
91.3
A
GLU
248
A
OE2
GLU
249
1_555
A
FE
305
B
FE
FE
1_555
A
HOH
318
J
O
HOH
1_555
87.8
A
MSE
19
SELENOMETHIONINE
A
MSE
20
MET
A
MSE
232
SELENOMETHIONINE
A
MSE
233
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
CG
ASP
7
A
CG
ASP
8
1
Y
1
A
OD1
ASP
7
A
OD1
ASP
8
1
Y
1
A
OD2
ASP
7
A
OD2
ASP
8
1
Y
1
A
CD
ARG
34
A
CD
ARG
35
1
Y
1
A
NE
ARG
34
A
NE
ARG
35
1
Y
1
A
CZ
ARG
34
A
CZ
ARG
35
1
Y
1
A
NH1
ARG
34
A
NH1
ARG
35
1
Y
1
A
NH2
ARG
34
A
NH2
ARG
35
1
Y
1
A
CG
GLN
57
A
CG
GLN
58
1
Y
1
A
CD
GLN
57
A
CD
GLN
58
1
Y
1
A
OE1
GLN
57
A
OE1
GLN
58
1
Y
1
A
NE2
GLN
57
A
NE2
GLN
58
1
Y
1
A
CG
GLN
168
A
CG
GLN
169
1
Y
1
A
CD
GLN
168
A
CD
GLN
169
1
Y
1
A
OE1
GLN
168
A
OE1
GLN
169
1
Y
1
A
NE2
GLN
168
A
NE2
GLN
169
1
Y
1
A
CG
GLU
175
A
CG
GLU
176
1
Y
1
A
CD
GLU
175
A
CD
GLU
176
1
Y
1
A
OE1
GLU
175
A
OE1
GLU
176
1
Y
1
A
OE2
GLU
175
A
OE2
GLU
176
1
Y
1
A
CG
LEU
303
A
CG
LEU
304
1
Y
1
A
CD1
LEU
303
A
CD1
LEU
304
1
Y
1
A
CD2
LEU
303
A
CD2
LEU
304
1
Y
1
A
GLY
0
A
GLY
1
1
Y
1
A
MSE
1
A
MSE
2
1
Y
1
A
ASP
2
A
ASP
3
1
Y
1
A
ILE
3
A
ILE
4
1
Y
1
A
SER
4
A
SER
5
1
Y
1
A
GLY
5
A
GLY
6
1
Y
1
A
ARG
6
A
ARG
7
1
Y
1
A
A
O
OG
ALA
SER
67
73
2.18
1
3.33
0.50
120.30
123.63
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
202
202
202
N
1
-4.09
0.50
120.30
116.21
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
202
202
202
N
1
3.02
0.50
120.30
123.32
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
295
295
295
N
1
A
ALA
74
68.27
-143.03
1
A
PHE
247
-150.20
-11.28
71.65
26.721
2.10
-1.490
0.000
0.710
1.040
0.000
0.980
0.959
0.939
1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3. ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. 4. GLYCEROL, POTASSIUM AND CHLORIDE MODELED ARE PRESENT IN CRYSTALLIZATION/CRYO CONDITIONS. 5. THE PRESENCE OF FE IONS WERE CONFIRMED BY ANOMALOUS DIFFERENCE FOURIERS AND X-RAY FLUORESCENCE EXPERIMENTS.
0.226
0.180
0.182
1.900
28.375
1268
24920
5.100
99.960
1.00
0.50
7.555
0.108
RANDOM
LIKELY RESIDUAL
1
THROUGHOUT
0.00
MAD
0.152
0.143
0.800
0.800
1.200
MAXIMUM LIKELIHOOD WITH PHASES
MASK
1.900
28.375
165
2505
28
0
2312
0.017
0.022
2432
0.003
0.020
1618
1.574
1.975
3317
1.060
3.000
3953
5.217
5.000
314
31.629
23.551
107
14.375
15.000
401
15.443
15.000
18
0.098
0.200
394
0.007
0.020
2715
0.002
0.020
504
2.054
3.000
1512
0.595
3.000
613
3.179
5.000
2451
5.441
8.000
920
7.655
11.000
858
0.346
0.269
1.949
92
1721
1813
20
99.890
23.082
1.90
28.375
3HC1
24939
0.090
0.090
1
11.6
3.800
100.000
0.761
1.90
1.95
1.9
6894
1820
0.761
1
3.80
100.00
0.574
1.95
2.00
2.5
6862
1804
0.574
1
3.80
100.00
0.422
2.00
2.06
3.5
6563
1725
0.422
1
3.80
100.00
0.365
2.06
2.12
3.9
6382
1678
0.365
1
3.80
100.00
0.285
2.12
2.19
5.0
6318
1656
0.285
1
3.80
100.00
0.246
2.19
2.27
5.7
6053
1588
0.246
1
3.80
100.00
0.218
2.27
2.36
6.3
5821
1525
0.218
1
3.80
100.00
0.171
2.36
2.45
7.9
5583
1463
0.171
1
3.80
100.00
0.145
2.45
2.56
9.1
5443
1423
0.145
1
3.80
100.00
0.118
2.56
2.69
11.2
5186
1355
0.118
1
3.80
100.00
0.102
2.69
2.83
12.8
4944
1292
0.102
1
3.80
100.00
0.092
2.83
3.00
14.5
4678
1223
0.092
1
3.80
100.00
0.078
3.00
3.21
18.1
4379
1147
0.078
1
3.80
100.00
0.062
3.21
3.47
21.5
4060
1062
0.062
1
3.80
100.00
0.051
3.47
3.80
25.7
3767
986
0.051
1
3.80
100.00
0.043
3.80
4.25
30.2
3423
899
0.043
1
3.80
100.00
0.040
4.25
4.91
31.0
3041
798
0.040
1
3.80
100.00
0.043
4.91
6.01
29.5
2569
679
0.043
1
3.80
100.00
0.039
6.01
8.50
30.8
1944
519
0.039
1
3.70
100.00
0.037
8.50
28.38
34.0
1063
297
0.037
1
3.60
97.90
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
5.5.0053
refinement
P.D. Adams
PDAdams@lbl.gov
C++
http://www.phenix-online.org/
PHENIX
package
phasing
George M. Sheldrick
gsheldr@shelx.uni-ac.gwdg.de
Fortran_77
http://shelx.uni-ac.gwdg.de/SHELX/
SHELX
package
model building
D.C. & J.S. Richardson lab
molprobity@kinemage.biochem.duke.edu
http://kinemage.biochem.duke.edu/molprobity/
MolProbity
package
3beta29
data scaling
Phil R. Evans
pre@mrc-lmb.cam.ac.uk
5/04/2004
Fortran_77
http://www.ccp4.ac.uk/dist/html/scala.html
SCALA
other
3.2.5
data extraction
PDB
help@deposit.rcsb.org
June 11, 2008
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.006
data reduction
MOSFLM
phasing
autoSHARP
Crystal structure of HDOD domain protein with unknown function (NP_953345.1) from GEOBACTER SULFURREDUCENS at 1.90 A resolution
1
N
N
2
N
N
2
N
N
3
N
N
4
N
N
5
N
N
5
N
N
5
N
N
5
N
N
6
N
N
ANALYTICAL SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS THE ASSIGNMENT OF A MONOMER AS A SIGNIFICANT OLIGOMERIZATION STATE STATE IN SOLUTION.
A
ASP
7
A
ASP
8
HELX_P
A
GLY
21
A
GLY
22
1
1
15
A
PRO
29
A
PRO
30
HELX_P
A
LEU
39
A
LEU
40
1
2
11
A
ALA
45
A
ALA
46
HELX_P
A
LEU
54
A
LEU
55
1
3
10
A
ASP
56
A
ASP
57
HELX_P
A
SER
69
A
SER
70
1
4
14
A
SER
69
A
SER
70
HELX_P
A
ALA
74
A
ALA
75
1
5
6
A
SER
80
A
SER
81
HELX_P
A
THR
108
A
THR
109
1
6
29
A
ASN
114
A
ASN
115
HELX_P
A
THR
136
A
THR
137
1
7
23
A
ASN
140
A
ASN
141
HELX_P
A
LEU
150
A
LEU
151
1
8
11
A
ASP
152
A
ASP
153
HELX_P
A
ARG
162
A
ARG
163
1
9
11
A
ARG
162
A
ARG
163
HELX_P
A
LYS
177
A
LYS
178
1
10
16
A
THR
179
A
THR
180
HELX_P
A
GLY
189
A
GLY
190
1
11
11
A
SER
191
A
SER
192
HELX_P
A
TRP
203
A
TRP
204
1
12
13
A
ASN
206
A
ASN
207
HELX_P
A
HIS
216
A
HIS
217
1
13
11
A
ASP
218
A
ASP
219
HELX_P
A
VAL
222
A
VAL
223
5
14
5
A
ALA
227
A
ALA
228
HELX_P
A
ARG
243
A
ARG
244
1
15
17
A
SER
255
A
SER
256
HELX_P
A
HIS
263
A
HIS
264
1
16
9
A
PRO
264
A
PRO
265
HELX_P
A
LEU
273
A
LEU
274
1
17
10
A
ASP
279
A
ASP
280
HELX_P
A
PHE
302
A
PHE
303
1
18
24
covale
1.327
both
A
PHE
18
A
C
PHE
19
1_555
A
MSE
19
A
N
MSE
20
1_555
covale
1.329
both
A
MSE
19
A
C
MSE
20
1_555
A
SER
20
A
N
SER
21
1_555
covale
1.350
both
A
ALA
231
A
C
ALA
232
1_555
A
MSE
232
A
N
MSE
233
1_555
covale
1.319
both
A
MSE
232
A
C
MSE
233
1_555
A
VAL
233
A
N
VAL
234
1_555
metalc
2.213
A
HIS
121
A
NE2
HIS
122
1_555
A
FE
306
C
FE
FE
1_555
metalc
2.331
A
HIS
151
A
NE2
HIS
152
1_555
A
FE
306
C
FE
FE
1_555
metalc
2.167
A
ASP
152
A
OD1
ASP
153
1_555
A
FE
305
B
FE
FE
1_555
metalc
2.125
A
ASP
152
A
OD2
ASP
153
1_555
A
FE
306
C
FE
FE
1_555
metalc
2.297
A
HIS
192
A
NE2
HIS
193
1_555
A
FE
305
B
FE
FE
1_555
metalc
2.189
A
HIS
216
A
NE2
HIS
217
1_555
A
FE
305
B
FE
FE
1_555
metalc
2.194
A
HIS
217
A
NE2
HIS
218
1_555
A
FE
305
B
FE
FE
1_555
metalc
2.253
A
ASP
237
A
OD1
ASP
238
1_555
A
FE
306
C
FE
FE
1_555
metalc
2.248
A
GLU
248
A
OE2
GLU
249
1_555
A
FE
305
B
FE
FE
1_555
metalc
2.241
A
GLU
248
A
OE1
GLU
249
1_555
A
FE
306
C
FE
FE
1_555
metalc
1.891
A
FE
305
B
FE
FE
1_555
A
HOH
318
J
O
HOH
1_555
metalc
1.989
A
FE
306
C
FE
FE
1_555
A
HOH
318
J
O
HOH
1_555
structural genomics, unknown function
NP_953345.1, HDOD domain protein with unknown function, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, unknown function
Q74AQ6_GEOSL
UNP
1
1
Q74AQ6
MDISGRDVETRLTLAREFMSGVDELPTVPDIVLRIAGKLNDPDVAIDEVADLLLQDQVLTARVVHLANSPLYSAARPISS
IRDAVIYLGLDLLREAIFTCAIVDLFKTGKGPLNRSTLWAHSLGVARIAKLIAERTGFLNPVNVYVAGLLHDVGEVFINF
FRGKEFSQVVTLVDEEKITFGQAEERLFGTSHCEVGFALAKRWSLNEFICDTILYHHDIEAVPYKQAAIVAMVAFADEYC
TLRRLGFEGHKPVDSVRTLLENHPSWGVIRRSLGGSDFDEKLIVAELDSSIVEIRAAVDELFLL
1
304
3HC1
1
304
Q74AQ6
A
1
2
305
1
expression tag
GLY
0
3HC1
A
Q74AQ6
UNP
1
BINDING SITE FOR RESIDUE FE A 305
A
FE
305
Software
7
BINDING SITE FOR RESIDUE FE A 306
A
FE
306
Software
7
BINDING SITE FOR RESIDUE CL A 307
A
CL
307
Software
1
BINDING SITE FOR RESIDUE GOL A 309
A
GOL
309
Software
5
BINDING SITE FOR RESIDUE GOL A 310
A
GOL
310
Software
1
BINDING SITE FOR RESIDUE GOL A 311
A
GOL
311
Software
6
BINDING SITE FOR RESIDUE GOL A 312
A
GOL
312
Software
9
A
ASP
152
A
ASP
153
7
1_555
A
HIS
192
A
HIS
193
7
1_555
A
HIS
216
A
HIS
217
7
1_555
A
HIS
217
A
HIS
218
7
1_555
A
GLU
248
A
GLU
249
7
1_555
A
FE
306
C
FE
7
1_555
A
HOH
318
J
HOH
7
1_555
A
HIS
121
A
HIS
122
7
1_555
A
HIS
151
A
HIS
152
7
1_555
A
ASP
152
A
ASP
153
7
1_555
A
ASP
237
A
ASP
238
7
1_555
A
GLU
248
A
GLU
249
7
1_555
A
FE
305
B
FE
7
1_555
A
HOH
318
J
HOH
7
1_555
A
ARG
16
A
ARG
17
1
1_555
A
ASP
56
A
ASP
57
5
1_555
A
VAL
58
A
VAL
59
5
1_555
A
LEU
59
A
LEU
60
5
1_555
A
ARG
62
A
ARG
63
5
1_555
A
ASP
104
A
ASP
105
5
1_555
A
ARG
62
A
ARG
63
1
1_555
A
LEU
71
A
LEU
72
6
1_555
A
TYR
72
A
TYR
73
6
1_555
A
LEU
92
A
LEU
93
6
1_555
A
GLU
95
A
GLU
96
6
1_555
A
LYS
130
A
LYS
131
6
1_555
A
GLU
134
A
GLU
135
6
1_555
A
PRO
26
A
PRO
27
9
1_555
A
THR
27
A
THR
28
9
1_555
A
VAL
28
A
VAL
29
9
1_555
A
PRO
29
A
PRO
30
9
1_555
A
ASP
104
A
ASP
105
9
1_555
A
LEU
105
A
LEU
106
9
1_555
A
THR
108
A
THR
109
9
1_555
A
HOH
325
J
HOH
9
1_555
A
HOH
465
J
HOH
9
1_555
4
P 1 21 1