0.029274
0.000000
0.000000
0.000000
0.021338
0.000000
0.000000
0.000000
0.013946
0.00000
0.00000
0.00000
Giedroc, D.P.
Keane, S.C.
Dann III, C.E.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
34.160
46.864
71.706
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
S
C
N
125
N
C
N
126
N
O
N
127
N
C
Y
128
N
C
Y
129
N
N
Y
130
N
C
Y
131
N
C
Y
132
N
N
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
S
C
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
S
C
N
171
N
C
N
172
N
O
N
173
N
C
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
O
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
N
N
192
S
C
N
193
N
C
N
194
N
O
N
195
N
C
N
196
N
C
N
197
N
C
N
198
N
C
N
199
N
N
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
N
N
217
S
C
N
218
N
C
N
219
N
O
N
220
N
C
N
221
N
C
N
222
N
S
N
223
N
C
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
N
N
237
S
C
N
238
N
C
N
239
N
O
N
240
N
C
Y
241
N
C
Y
242
N
C
Y
243
N
C
Y
244
N
C
Y
245
N
C
Y
246
N
C
N
247
N
O
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
N
N
260
S
C
N
261
N
C
N
262
N
O
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
N
N
277
S
C
N
278
N
C
N
279
N
O
N
280
N
C
N
281
N
O
N
282
N
O
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
R
C
N
295
N
O
N
296
N
C
N
297
N
O
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
N
N
308
S
C
N
309
N
C
N
310
N
O
N
311
N
C
Y
312
N
C
Y
313
N
C
Y
314
N
C
Y
315
N
N
Y
316
N
C
Y
317
N
C
Y
318
N
C
Y
319
N
C
Y
320
N
C
N
321
N
O
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
N
N
335
S
C
N
336
N
C
N
337
N
O
N
338
N
C
Y
339
N
C
Y
340
N
C
Y
341
N
C
Y
342
N
C
Y
343
N
C
Y
344
N
C
N
345
N
O
N
346
N
O
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
N
N
359
S
C
N
360
N
C
N
361
N
O
N
362
N
C
N
363
N
C
N
364
N
C
N
365
N
O
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
Y
235
N
doub
Y
236
N
sing
Y
237
N
sing
N
238
N
sing
Y
239
N
doub
N
240
N
sing
Y
241
N
doub
N
242
N
sing
Y
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
doub
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
doub
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
Y
304
N
doub
Y
305
N
sing
Y
306
N
sing
N
307
N
sing
Y
308
N
doub
Y
309
N
sing
Y
310
N
sing
N
311
N
sing
Y
312
N
sing
Y
313
N
doub
N
314
N
sing
Y
315
N
doub
N
316
N
sing
Y
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
doub
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
Y
332
N
doub
Y
333
N
sing
Y
334
N
sing
N
335
N
sing
Y
336
N
doub
N
337
N
sing
Y
338
N
doub
N
339
N
sing
Y
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
doub
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
394
544
557
10.1016/j.jmb.2009.09.040
19782089
Coronavirus N Protein N-Terminal Domain (NTD) Specifically Binds the Transcriptional Regulatory Sequence (TRS) and Melts TRS-cTRS RNA Duplexes.
2009
10.2210/pdb3hd4/pdb
pdb_00003hd4
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
113.0
1
Osmic mirrors
IMAGE PLATE
2009-01-14
RIGAKU RAXIS IV++
Graphite
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RUH3R
15542.068
Nucleoprotein
N-terminal domain (UNP residues 60-197)
1
man
polymer
18.015
water
121
nat
water
Nucleocapsid protein, Protein N, NC
no
no
MGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQKGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAG
ASYGDSIEGVFWVANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRS
MGSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQKGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAG
ASYGDSIEGVFWVANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRS
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
MHV-A59
A59
sample
N, 7a
11142
Murine hepatitis virus
562
Escherichia coli
BL21(DE3)pLysS
1
1.85
33.64
VAPOR DIFFUSION, HANGING DROP
9.0
30% PEG 1000, 50mM CAPSO, pH 9.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
struct_sheet
repository
Initial release
Source and taxonomy
Version format compliance
Data collection
Database references
Derived calculations
1
0
2009-11-17
1
1
2011-07-13
1
2
2024-02-21
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_sheet.number_strands
RCSB
Y
RCSB
2009-05-06
REL
REL
HOH
water
HOH
1
2
HOH
HOH
1
A
HOH
2
2
HOH
HOH
2
A
HOH
3
2
HOH
HOH
3
A
HOH
4
2
HOH
HOH
4
A
HOH
5
2
HOH
HOH
5
A
HOH
6
2
HOH
HOH
6
A
HOH
7
2
HOH
HOH
7
A
HOH
8
2
HOH
HOH
8
A
HOH
9
2
HOH
HOH
9
A
HOH
10
2
HOH
HOH
10
A
HOH
11
2
HOH
HOH
11
A
HOH
12
2
HOH
HOH
12
A
HOH
13
2
HOH
HOH
13
A
HOH
14
2
HOH
HOH
14
A
HOH
15
2
HOH
HOH
15
A
HOH
16
2
HOH
HOH
16
A
HOH
17
2
HOH
HOH
17
A
HOH
18
2
HOH
HOH
18
A
HOH
19
2
HOH
HOH
19
A
HOH
20
2
HOH
HOH
20
A
HOH
21
2
HOH
HOH
21
A
HOH
22
2
HOH
HOH
22
A
HOH
23
2
HOH
HOH
23
A
HOH
24
2
HOH
HOH
24
A
HOH
25
2
HOH
HOH
25
A
HOH
26
2
HOH
HOH
26
A
HOH
27
2
HOH
HOH
27
A
HOH
28
2
HOH
HOH
28
A
HOH
29
2
HOH
HOH
29
A
HOH
30
2
HOH
HOH
30
A
HOH
31
2
HOH
HOH
31
A
HOH
32
2
HOH
HOH
32
A
HOH
33
2
HOH
HOH
33
A
HOH
34
2
HOH
HOH
34
A
HOH
35
2
HOH
HOH
35
A
HOH
36
2
HOH
HOH
36
A
HOH
37
2
HOH
HOH
37
A
HOH
38
2
HOH
HOH
38
A
HOH
39
2
HOH
HOH
39
A
HOH
40
2
HOH
HOH
40
A
HOH
41
2
HOH
HOH
41
A
HOH
42
2
HOH
HOH
42
A
HOH
43
2
HOH
HOH
43
A
HOH
44
2
HOH
HOH
44
A
HOH
45
2
HOH
HOH
45
A
HOH
46
2
HOH
HOH
46
A
HOH
47
2
HOH
HOH
47
A
HOH
48
2
HOH
HOH
48
A
HOH
49
2
HOH
HOH
49
A
HOH
50
2
HOH
HOH
50
A
HOH
51
2
HOH
HOH
51
A
HOH
52
2
HOH
HOH
52
A
HOH
53
2
HOH
HOH
53
A
HOH
54
2
HOH
HOH
54
A
HOH
55
2
HOH
HOH
55
A
HOH
56
2
HOH
HOH
56
A
HOH
57
2
HOH
HOH
57
A
HOH
58
2
HOH
HOH
58
A
HOH
59
2
HOH
HOH
198
A
HOH
60
2
HOH
HOH
199
A
HOH
61
2
HOH
HOH
200
A
HOH
63
2
HOH
HOH
201
A
HOH
64
2
HOH
HOH
202
A
HOH
65
2
HOH
HOH
203
A
HOH
66
2
HOH
HOH
204
A
HOH
68
2
HOH
HOH
205
A
HOH
69
2
HOH
HOH
206
A
HOH
70
2
HOH
HOH
207
A
HOH
71
2
HOH
HOH
208
A
HOH
72
2
HOH
HOH
209
A
HOH
73
2
HOH
HOH
210
A
HOH
74
2
HOH
HOH
211
A
HOH
75
2
HOH
HOH
212
A
HOH
76
2
HOH
HOH
213
A
HOH
77
2
HOH
HOH
214
A
HOH
78
2
HOH
HOH
215
A
HOH
79
2
HOH
HOH
216
A
HOH
80
2
HOH
HOH
217
A
HOH
81
2
HOH
HOH
218
A
HOH
83
2
HOH
HOH
219
A
HOH
84
2
HOH
HOH
220
A
HOH
85
2
HOH
HOH
221
A
HOH
86
2
HOH
HOH
222
A
HOH
87
2
HOH
HOH
223
A
HOH
88
2
HOH
HOH
224
A
HOH
89
2
HOH
HOH
225
A
HOH
90
2
HOH
HOH
226
A
HOH
91
2
HOH
HOH
227
A
HOH
92
2
HOH
HOH
228
A
HOH
93
2
HOH
HOH
229
A
HOH
94
2
HOH
HOH
230
A
HOH
95
2
HOH
HOH
231
A
HOH
96
2
HOH
HOH
232
A
HOH
97
2
HOH
HOH
233
A
HOH
98
2
HOH
HOH
234
A
HOH
99
2
HOH
HOH
235
A
HOH
100
2
HOH
HOH
236
A
HOH
101
2
HOH
HOH
237
A
HOH
102
2
HOH
HOH
238
A
HOH
104
2
HOH
HOH
239
A
HOH
105
2
HOH
HOH
240
A
HOH
106
2
HOH
HOH
241
A
HOH
107
2
HOH
HOH
242
A
HOH
108
2
HOH
HOH
243
A
HOH
109
2
HOH
HOH
244
A
HOH
110
2
HOH
HOH
245
A
HOH
111
2
HOH
HOH
246
A
HOH
112
2
HOH
HOH
247
A
HOH
113
2
HOH
HOH
248
A
HOH
114
2
HOH
HOH
249
A
HOH
115
2
HOH
HOH
250
A
HOH
116
2
HOH
HOH
251
A
HOH
117
2
HOH
HOH
252
A
HOH
119
2
HOH
HOH
253
A
HOH
120
2
HOH
HOH
254
A
HOH
121
2
HOH
HOH
255
A
HOH
122
2
HOH
HOH
256
A
HOH
123
2
HOH
HOH
257
A
HOH
125
2
HOH
HOH
258
A
HOH
126
2
HOH
HOH
259
A
HOH
127
2
HOH
HOH
260
A
n
1
59
A
n
2
60
A
n
3
61
A
n
4
62
A
n
5
63
A
PRO
64
n
6
PRO
64
A
HIS
65
n
7
HIS
65
A
TYR
66
n
8
TYR
66
A
SER
67
n
9
SER
67
A
TRP
68
n
10
TRP
68
A
PHE
69
n
11
PHE
69
A
SER
70
n
12
SER
70
A
GLY
71
n
13
GLY
71
A
ILE
72
n
14
ILE
72
A
THR
73
n
15
THR
73
A
GLN
74
n
16
GLN
74
A
PHE
75
n
17
PHE
75
A
GLN
76
n
18
GLN
76
A
LYS
77
n
19
LYS
77
A
GLY
78
n
20
GLY
78
A
LYS
79
n
21
LYS
79
A
GLU
80
n
22
GLU
80
A
PHE
81
n
23
PHE
81
A
GLN
82
n
24
GLN
82
A
PHE
83
n
25
PHE
83
A
ALA
84
n
26
ALA
84
A
GLU
85
n
27
GLU
85
A
GLY
86
n
28
GLY
86
A
GLN
87
n
29
GLN
87
A
GLY
88
n
30
GLY
88
A
VAL
89
n
31
VAL
89
A
PRO
90
n
32
PRO
90
A
ILE
91
n
33
ILE
91
A
ALA
92
n
34
ALA
92
A
ASN
93
n
35
ASN
93
A
GLY
94
n
36
GLY
94
A
ILE
95
n
37
ILE
95
A
PRO
96
n
38
PRO
96
A
ALA
97
n
39
ALA
97
A
SER
98
n
40
SER
98
A
GLU
99
n
41
GLU
99
A
GLN
100
n
42
GLN
100
A
LYS
101
n
43
LYS
101
A
GLY
102
n
44
GLY
102
A
TYR
103
n
45
TYR
103
A
TRP
104
n
46
TRP
104
A
TYR
105
n
47
TYR
105
A
ARG
106
n
48
ARG
106
A
HIS
107
n
49
HIS
107
A
ASN
108
n
50
ASN
108
A
ARG
109
n
51
ARG
109
A
ARG
110
n
52
ARG
110
A
SER
111
n
53
SER
111
A
PHE
112
n
54
PHE
112
A
ALA
113
n
55
LYS
113
A
THR
114
n
56
THR
114
A
PRO
115
n
57
PRO
115
A
ASP
116
n
58
ASP
116
A
GLY
117
n
59
GLY
117
A
GLN
118
n
60
GLN
118
A
GLN
119
n
61
GLN
119
A
LYS
120
n
62
LYS
120
A
GLN
121
n
63
GLN
121
A
LEU
122
n
64
LEU
122
A
LEU
123
n
65
LEU
123
A
PRO
124
n
66
PRO
124
A
ARG
125
n
67
ARG
125
A
TRP
126
n
68
TRP
126
A
TYR
127
n
69
TYR
127
A
PHE
128
n
70
PHE
128
A
TYR
129
n
71
TYR
129
A
TYR
130
n
72
TYR
130
A
LEU
131
n
73
LEU
131
A
GLY
132
n
74
GLY
132
A
THR
133
n
75
THR
133
A
GLY
134
n
76
GLY
134
A
PRO
135
n
77
PRO
135
A
HIS
136
n
78
HIS
136
A
ALA
137
n
79
ALA
137
A
GLY
138
n
80
GLY
138
A
ALA
139
n
81
ALA
139
A
SER
140
n
82
SER
140
A
TYR
141
n
83
TYR
141
A
GLY
142
n
84
GLY
142
A
ASP
143
n
85
ASP
143
A
SER
144
n
86
SER
144
A
ILE
145
n
87
ILE
145
A
GLU
146
n
88
GLU
146
A
GLY
147
n
89
GLY
147
A
VAL
148
n
90
VAL
148
A
PHE
149
n
91
PHE
149
A
TRP
150
n
92
TRP
150
A
VAL
151
n
93
VAL
151
A
ALA
152
n
94
ALA
152
A
ASN
153
n
95
ASN
153
A
SER
154
n
96
SER
154
A
GLN
155
n
97
GLN
155
A
ALA
156
n
98
ALA
156
A
ASP
157
n
99
ASP
157
A
THR
158
n
100
THR
158
A
ASN
159
n
101
ASN
159
A
THR
160
n
102
THR
160
A
ARG
161
n
103
ARG
161
A
SER
162
n
104
SER
162
A
ASP
163
n
105
ASP
163
A
ILE
164
n
106
ILE
164
A
VAL
165
n
107
VAL
165
A
GLU
166
n
108
GLU
166
A
ARG
167
n
109
ARG
167
A
ASP
168
n
110
ASP
168
A
PRO
169
n
111
PRO
169
A
SER
170
n
112
SER
170
A
SER
171
n
113
SER
171
A
HIS
172
n
114
HIS
172
A
GLU
173
n
115
GLU
173
A
ALA
174
n
116
ALA
174
A
ILE
175
n
117
ILE
175
A
PRO
176
n
118
PRO
176
A
THR
177
n
119
THR
177
A
ARG
178
n
120
ARG
178
A
PHE
179
n
121
PHE
179
A
ALA
180
n
122
ALA
180
A
PRO
181
n
123
PRO
181
A
GLY
182
n
124
GLY
182
A
THR
183
n
125
THR
183
A
VAL
184
n
126
VAL
184
A
LEU
185
n
127
LEU
185
A
PRO
186
n
128
PRO
186
A
GLN
187
n
129
GLN
187
A
GLY
188
n
130
GLY
188
A
PHE
189
n
131
PHE
189
A
TYR
190
n
132
TYR
190
A
VAL
191
n
133
VAL
191
A
GLU
192
n
134
GLU
192
A
GLY
193
n
135
GLY
193
A
SER
194
n
136
SER
194
A
n
137
195
A
n
138
196
A
n
139
197
A
-0.8872
1.5633
0.5919
-0.1701
-0.6636
1.5692
0.1916
0.0262
0.1273
0.0308
-0.0352
0.1981
0.1465
-0.1642
-0.1372
0.1532
-0.0256
0.0222
0.2088
-0.0163
0.2035
refined
-7.8741
-9.8314
12.0772
X-RAY DIFFRACTION
1.3646
-0.3842
-0.7523
0.1712
0.0794
0.5664
-0.0179
-0.0138
0.0930
-0.0152
0.0755
-0.0567
-0.1145
0.2044
-0.0731
0.1602
-0.0203
-0.0175
0.1542
-0.0194
0.1993
refined
4.2641
-3.3105
7.1865
X-RAY DIFFRACTION
0.4828
0.6411
-1.0972
1.0385
-0.1429
4.9410
0.0741
-0.2088
-0.0487
0.1097
-0.0818
0.0507
-0.2542
0.5525
0.0703
0.1025
0.0160
0.0121
0.1679
0.0078
0.1665
refined
-2.7999
-1.1406
11.7004
X-RAY DIFFRACTION
6.9432
-0.7022
3.0151
5.2366
7.9660
-0.9327
-0.2511
-1.5400
0.2854
-0.1273
-0.1344
-0.5151
-0.9890
-0.0705
0.0275
0.5189
0.0223
0.0305
0.5860
0.1854
0.4998
refined
1.5885
-8.5529
33.6061
X-RAY DIFFRACTION
0.4847
0.1006
-0.4743
-0.6922
1.8755
1.2440
0.0611
-0.5523
-0.0498
0.2067
0.1678
0.1967
0.4727
0.1605
-0.2129
0.2556
0.0099
0.0368
0.3572
-0.0139
0.1699
refined
2.7248
-4.8593
23.5146
X-RAY DIFFRACTION
1.4696
-0.4577
1.0367
1.6290
-0.0930
1.5935
-0.0263
0.0205
0.0763
-0.0408
-0.0101
0.1499
-0.1726
-0.1007
0.0352
0.1520
0.0225
0.0025
0.1626
-0.0088
0.1770
refined
-5.8685
2.7917
5.4754
X-RAY DIFFRACTION
0.1883
0.8344
0.0890
1.9142
-1.5679
0.9467
-0.0632
-0.0195
0.0970
-0.0606
0.2894
0.4317
0.0016
-0.4500
-0.2165
0.1901
-0.0097
-0.0059
0.2027
0.0288
0.2309
refined
-13.4927
-10.6117
6.5000
X-RAY DIFFRACTION
5.8846
0.9708
-2.0331
1.6635
-0.6504
0.7822
-0.3291
-0.6502
-0.4843
-0.4247
0.0478
-0.0321
0.1791
0.1312
0.2134
0.1850
0.0183
0.0082
0.1954
0.0154
0.1807
refined
-0.8402
-15.5466
7.8835
X-RAY DIFFRACTION
-0.0415
0.3289
0.4431
0.0486
0.4425
1.4723
0.0609
-0.1151
-0.1755
-0.0047
-0.1501
-0.1844
0.0256
0.0210
0.0728
0.1714
-0.0355
0.0092
0.1781
-0.0339
0.1803
refined
9.3269
-6.3638
2.3489
X-RAY DIFFRACTION
3.5306
-4.3339
-0.8806
-1.7439
1.3225
5.4771
-0.1631
0.0758
-0.2395
-0.0135
0.1301
-0.3512
0.5150
0.5068
-0.0481
0.1904
0.0410
-0.0114
0.2767
-0.0178
0.2016
refined
9.3312
-7.8675
13.6427
X-RAY DIFFRACTION
A
64
A
70
X-RAY DIFFRACTION
1
(chain A and resid 64:70)
A
71
A
99
X-RAY DIFFRACTION
2
(chain A and resid 71:99)
A
100
A
108
X-RAY DIFFRACTION
3
(chain A and resid 100:108)
A
109
A
118
X-RAY DIFFRACTION
4
(chain A and resid 109:118)
A
119
A
127
X-RAY DIFFRACTION
5
(chain A and resid 119:127)
A
128
A
160
X-RAY DIFFRACTION
6
(chain A and resid 128:160)
A
161
A
172
X-RAY DIFFRACTION
7
(chain A and resid 161:172)
A
173
A
178
X-RAY DIFFRACTION
8
(chain A and resid 173:178)
A
179
A
185
X-RAY DIFFRACTION
9
(chain A and resid 179:185)
A
186
A
194
X-RAY DIFFRACTION
10
(chain A and resid 186:194)
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
PHE
149
A
O
PHE
91
A
N
TRP
104
A
N
TRP
46
A
N
HIS
107
A
N
HIS
49
A
O
ARG
125
A
O
ARG
67
A
O
TRP
126
A
O
TRP
68
A
N
ILE
72
A
N
ILE
14
A
N
THR
73
A
N
THR
15
A
O
TYR
190
A
O
TYR
132
1
A
CG
LYS
113
A
CG
LYS
55
1
Y
1
A
CD
LYS
113
A
CD
LYS
55
1
Y
1
A
CE
LYS
113
A
CE
LYS
55
1
Y
1
A
NZ
LYS
113
A
NZ
LYS
55
1
Y
1
A
MET
59
A
MET
1
1
Y
1
A
GLY
60
A
GLY
2
1
Y
1
A
SER
61
A
SER
3
1
Y
1
A
VAL
62
A
VAL
4
1
Y
1
A
VAL
63
A
VAL
5
1
Y
1
A
GLY
195
A
GLY
137
1
Y
1
A
ARG
196
A
ARG
138
1
Y
1
A
SER
197
A
SER
139
1
Y
1
-3.46
0.50
120.30
116.84
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
109
109
109
N
104.06
29.664
11.94
1.509
0.000
-0.000
0.198
-0.000
-1.707
0.226
0.185
0.189
1.747
22.273
1078
11055
12133
8.880
99.480
1.00
1.00
0.864
0.310
1
1.34
20.000
0.900
1.110
ML
FLAT BULK SOLVENT MODEL
41.469
0.362
1.747
22.273
121
1167
0
0
1046
0.010
1084
1.087
1474
0.076
139
0.005
197
15.992
374
0.278
0.219
1.827
130
1313
1443
8
97.000
0.252
0.209
1.923
122
1379
1501
8
99.000
0.244
0.194
2.044
139
1345
1484
8
100.000
0.222
0.177
2.201
140
1356
1496
8
100.000
0.236
0.179
2.422
123
1399
1522
8
100.000
0.235
0.186
2.773
144
1369
1513
8
100.000
0.203
0.177
3.491
131
1403
1534
8
100.000
0.194
0.160
22.275
149
1491
1640
8
100.000
25.280
1.75
22.3
3HD4
12172
12133
0
0
0.049
1
5.2
99.5
0.405
1.75
1.78
1
3.7
97.2
data collection
CrystalClear
phasing
PHASER
refinement
PHENIX
(phenix.refine)
data reduction
HKL-2000
data scaling
HKL-2000
MHV Nucleocapsid Protein NTD
1
N
N
2
N
N
A
PRO
96
A
PRO
38
HELX_P
A
GLU
99
A
GLU
41
5
1
4
VIRAL PROTEIN
Beta platform Beta hairpin, Golgi apparatus, Nucleus, Phosphoprotein, Ribonucleoprotein, RNA-binding, Transcription, Transcription regulation, Viral nucleoprotein, Virion, VIRAL PROTEIN
NCAP_CVMA5
UNP
1
60
P03416
GSVVPHYSWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQKGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGA
SYGDSIEGVFWVANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRS
60
197
3HD4
60
197
P03416
A
1
2
139
1
initiating methionine
MET
59
3HD4
A
P03416
UNP
1
5
1
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
VAL
148
A
VAL
90
A
ALA
152
A
ALA
94
A
LYS
101
A
LYS
43
A
HIS
107
A
HIS
49
A
ARG
125
A
ARG
67
A
TYR
130
A
TYR
72
A
ILE
72
A
ILE
14
A
GLN
74
A
GLN
16
A
PHE
189
A
PHE
131
A
VAL
191
A
VAL
133
A
GLN
119
A
GLN
61
A
GLN
121
A
GLN
63
19
P 21 21 21