0.017358 0.000000 0.000000 0.000000 0.017358 0.000000 0.000000 0.000000 0.006122 0.00000 0.00000 0.00000 Lee, S. Antony, L. Hartmann, R. Knaus, K.J. Surewicz, K. Surewicz, W.K. Yee, V.C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 16 90.00 90.00 90.00 57.611 57.611 163.337 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Cd 2 112.411 CADMIUM ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK Embo J. EMJODG 0897 0261-4189 29 251 262 10.1038/emboj.2009.333 19927125 Conformational diversity in prion protein variants influences intermolecular beta-sheet formation. 2010 10.2210/pdb3her/pdb pdb_00003her 100 1 2008-03-06 SINGLE WAVELENGTH M x-ray 1 0.9786 1.0 19-ID APS 0.9786 SYNCHROTRON APS BEAMLINE 19-ID 16076.835 Major prion protein UNP residues 90-231 F198S 2 man polymer 112.411 CADMIUM ION 2 syn non-polymer 18.015 water 138 nat water PrP, PrP27-30, PrP33-35C, ASCR no no GQGGGTHSQWNKPSKPKTNMKHMAGAAAAGAVVGGLGGYVLGSAMSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPMDEY SNQNNFVHDCVNITIKQHTVTTTTKGENSTETDVKMMERVVEQMCITQYERESQAYYQRGSS GQGGGTHSQWNKPSKPKTNMKHMAGAAAAGAVVGGLGGYVLGSAMSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPMDEY SNQNNFVHDCVNITIKQHTVTTTTKGENSTETDVKMMERVVEQMCITQYERESQAYYQRGSS A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample PRNP, PRIP, PRP 9606 Homo sapiens 562 Escherichia coli 1 2.11 41.64 VAPOR DIFFUSION, SITTING DROP 8.5 0.1 M Tris, 0.2 M Mg acetate, 8% PEG 6K, 5 mM CdCl2, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K 293 software database_2 struct_conn struct_ref_seq_dif struct_site repository Initial release Version format compliance Refinement description Database references Derived calculations 1 0 2010-01-12 1 1 2011-07-13 1 2 2017-11-01 1 3 2021-10-13 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2009-05-10 REL REL CD CADMIUM ION HOH water CD 300 2 CD CD 300 A CD 301 2 CD CD 301 B HOH 302 3 HOH HOH 302 A HOH 303 3 HOH HOH 303 A HOH 304 3 HOH HOH 304 A HOH 305 3 HOH HOH 305 A HOH 306 3 HOH HOH 306 A HOH 307 3 HOH HOH 307 A HOH 308 3 HOH HOH 308 A HOH 309 3 HOH HOH 309 A HOH 310 3 HOH HOH 310 A HOH 311 3 HOH HOH 311 A HOH 312 3 HOH HOH 312 A HOH 313 3 HOH HOH 313 A HOH 314 3 HOH HOH 314 A HOH 315 3 HOH HOH 315 A HOH 316 3 HOH HOH 316 A HOH 317 3 HOH HOH 317 A HOH 318 3 HOH HOH 318 A HOH 319 3 HOH HOH 319 A HOH 320 3 HOH HOH 320 A HOH 321 3 HOH HOH 321 A HOH 322 3 HOH HOH 322 A HOH 323 3 HOH HOH 323 A HOH 324 3 HOH HOH 324 A HOH 325 3 HOH HOH 325 A HOH 326 3 HOH HOH 326 A HOH 327 3 HOH HOH 327 A HOH 328 3 HOH HOH 328 A HOH 329 3 HOH HOH 329 A HOH 330 3 HOH HOH 330 A HOH 331 3 HOH HOH 331 A HOH 332 3 HOH HOH 332 A HOH 333 3 HOH HOH 333 A HOH 334 3 HOH HOH 334 A HOH 335 3 HOH HOH 335 A HOH 336 3 HOH HOH 336 A HOH 337 3 HOH HOH 337 A HOH 338 3 HOH HOH 338 A HOH 339 3 HOH HOH 339 A HOH 340 3 HOH HOH 340 A HOH 341 3 HOH HOH 341 A HOH 342 3 HOH HOH 342 A HOH 343 3 HOH HOH 343 A HOH 344 3 HOH HOH 344 A HOH 345 3 HOH HOH 345 A HOH 346 3 HOH HOH 346 A HOH 347 3 HOH HOH 347 A HOH 348 3 HOH HOH 348 A HOH 349 3 HOH HOH 349 A HOH 350 3 HOH HOH 350 A HOH 351 3 HOH HOH 351 A HOH 352 3 HOH HOH 352 A HOH 353 3 HOH HOH 353 A HOH 354 3 HOH HOH 354 A HOH 355 3 HOH HOH 355 A HOH 356 3 HOH HOH 356 A HOH 357 3 HOH HOH 357 A HOH 358 3 HOH HOH 358 A HOH 359 3 HOH HOH 359 A HOH 360 3 HOH HOH 360 A HOH 361 3 HOH HOH 361 A HOH 362 3 HOH HOH 362 A HOH 363 3 HOH HOH 363 A HOH 364 3 HOH HOH 364 A HOH 365 3 HOH HOH 365 A HOH 366 3 HOH HOH 366 A HOH 367 3 HOH HOH 367 A HOH 368 3 HOH HOH 368 A HOH 369 3 HOH HOH 369 A HOH 370 3 HOH HOH 370 A HOH 371 3 HOH HOH 371 A HOH 372 3 HOH HOH 372 A HOH 373 3 HOH HOH 373 A HOH 374 3 HOH HOH 374 A HOH 375 3 HOH HOH 375 A HOH 376 3 HOH HOH 376 A HOH 377 3 HOH HOH 377 A HOH 378 3 HOH HOH 378 A HOH 379 3 HOH HOH 379 A HOH 380 3 HOH HOH 380 A HOH 381 3 HOH HOH 381 A HOH 382 3 HOH HOH 382 A HOH 383 3 HOH HOH 383 A HOH 384 3 HOH HOH 384 A HOH 385 3 HOH HOH 385 A HOH 386 3 HOH HOH 386 A HOH 387 3 HOH HOH 387 A HOH 388 3 HOH HOH 388 B HOH 389 3 HOH HOH 389 B HOH 390 3 HOH HOH 390 B HOH 391 3 HOH HOH 391 B HOH 392 3 HOH HOH 392 B HOH 393 3 HOH HOH 393 B HOH 394 3 HOH HOH 394 B HOH 395 3 HOH HOH 395 B HOH 396 3 HOH HOH 396 B HOH 397 3 HOH HOH 397 B HOH 398 3 HOH HOH 398 B HOH 399 3 HOH HOH 399 B HOH 400 3 HOH HOH 400 B HOH 401 3 HOH HOH 401 B HOH 402 3 HOH HOH 402 B HOH 403 3 HOH HOH 403 B HOH 404 3 HOH HOH 404 B HOH 405 3 HOH HOH 405 B HOH 406 3 HOH HOH 406 B HOH 407 3 HOH HOH 407 B HOH 408 3 HOH HOH 408 B HOH 409 3 HOH HOH 409 B HOH 410 3 HOH HOH 410 B HOH 411 3 HOH HOH 411 B HOH 412 3 HOH HOH 412 B HOH 413 3 HOH HOH 413 B HOH 414 3 HOH HOH 414 B HOH 415 3 HOH HOH 415 B HOH 416 3 HOH HOH 416 B HOH 417 3 HOH HOH 417 B HOH 418 3 HOH HOH 418 B HOH 419 3 HOH HOH 419 B HOH 420 3 HOH HOH 420 B HOH 421 3 HOH HOH 421 B HOH 422 3 HOH HOH 422 B HOH 423 3 HOH HOH 423 B HOH 424 3 HOH HOH 424 B HOH 425 3 HOH HOH 425 B HOH 426 3 HOH HOH 426 B HOH 427 3 HOH HOH 427 B HOH 428 3 HOH HOH 428 B HOH 429 3 HOH HOH 429 B HOH 430 3 HOH HOH 430 B HOH 431 3 HOH HOH 431 B HOH 432 3 HOH HOH 432 B HOH 433 3 HOH HOH 433 B HOH 434 3 HOH HOH 434 B HOH 435 3 HOH HOH 435 B HOH 436 3 HOH HOH 436 B HOH 437 3 HOH HOH 437 B HOH 438 3 HOH HOH 438 B HOH 439 3 HOH HOH 439 B n 1 90 A n 2 91 A n 3 92 A n 4 93 A n 5 94 A n 6 95 A n 7 96 A n 8 97 A n 9 98 A n 10 99 A n 11 100 A n 12 101 A n 13 102 A n 14 103 A n 15 104 A n 16 105 A n 17 106 A n 18 107 A n 19 108 A n 20 109 A n 21 110 A n 22 111 A n 23 112 A n 24 113 A n 25 114 A n 26 115 A n 27 116 A n 28 117 A n 29 118 A n 30 119 A n 31 120 A n 32 121 A n 33 122 A n 34 123 A n 35 124 A LEU 125 n 36 LEU 125 A GLY 126 n 37 GLY 126 A GLY 127 n 38 GLY 127 A TYR 128 n 39 TYR 128 A VAL 129 n 40 VAL 129 A LEU 130 n 41 LEU 130 A GLY 131 n 42 GLY 131 A SER 132 n 43 SER 132 A ALA 133 n 44 ALA 133 A MET 134 n 45 MET 134 A SER 135 n 46 SER 135 A ARG 136 n 47 ARG 136 A PRO 137 n 48 PRO 137 A ILE 138 n 49 ILE 138 A ILE 139 n 50 ILE 139 A HIS 140 n 51 HIS 140 A PHE 141 n 52 PHE 141 A GLY 142 n 53 GLY 142 A SER 143 n 54 SER 143 A ASP 144 n 55 ASP 144 A TYR 145 n 56 TYR 145 A GLU 146 n 57 GLU 146 A ASP 147 n 58 ASP 147 A ARG 148 n 59 ARG 148 A TYR 149 n 60 TYR 149 A TYR 150 n 61 TYR 150 A ARG 151 n 62 ARG 151 A GLU 152 n 63 GLU 152 A ASN 153 n 64 ASN 153 A MET 154 n 65 MET 154 A HIS 155 n 66 HIS 155 A ARG 156 n 67 ARG 156 A TYR 157 n 68 TYR 157 A PRO 158 n 69 PRO 158 A ASN 159 n 70 ASN 159 A GLN 160 n 71 GLN 160 A VAL 161 n 72 VAL 161 A TYR 162 n 73 TYR 162 A TYR 163 n 74 TYR 163 A ARG 164 n 75 ARG 164 A PRO 165 n 76 PRO 165 A MET 166 n 77 MET 166 A ASP 167 n 78 ASP 167 A GLU 168 n 79 GLU 168 A TYR 169 n 80 TYR 169 A SER 170 n 81 SER 170 A ASN 171 n 82 ASN 171 A GLN 172 n 83 GLN 172 A ASN 173 n 84 ASN 173 A ASN 174 n 85 ASN 174 A PHE 175 n 86 PHE 175 A VAL 176 n 87 VAL 176 A HIS 177 n 88 HIS 177 A ASP 178 n 89 ASP 178 A CYS 179 n 90 CYS 179 A VAL 180 n 91 VAL 180 A ASN 181 n 92 ASN 181 A ILE 182 n 93 ILE 182 A THR 183 n 94 THR 183 A ILE 184 n 95 ILE 184 A LYS 185 n 96 LYS 185 A GLN 186 n 97 GLN 186 A HIS 187 n 98 HIS 187 A THR 188 n 99 THR 188 A VAL 189 n 100 VAL 189 A THR 190 n 101 THR 190 A THR 191 n 102 THR 191 A THR 192 n 103 THR 192 A n 104 193 A n 105 194 A n 106 195 A n 107 196 A n 108 197 A SER 198 n 109 SER 198 A THR 199 n 110 THR 199 A GLU 200 n 111 GLU 200 A THR 201 n 112 THR 201 A ASP 202 n 113 ASP 202 A VAL 203 n 114 VAL 203 A LYS 204 n 115 LYS 204 A MET 205 n 116 MET 205 A MET 206 n 117 MET 206 A GLU 207 n 118 GLU 207 A ARG 208 n 119 ARG 208 A VAL 209 n 120 VAL 209 A VAL 210 n 121 VAL 210 A GLU 211 n 122 GLU 211 A GLN 212 n 123 GLN 212 A MET 213 n 124 MET 213 A CYS 214 n 125 CYS 214 A ILE 215 n 126 ILE 215 A THR 216 n 127 THR 216 A GLN 217 n 128 GLN 217 A TYR 218 n 129 TYR 218 A GLU 219 n 130 GLU 219 A ARG 220 n 131 ARG 220 A GLU 221 n 132 GLU 221 A SER 222 n 133 SER 222 A GLN 223 n 134 GLN 223 A ALA 224 n 135 ALA 224 A TYR 225 n 136 TYR 225 A TYR 226 n 137 TYR 226 A n 138 227 A n 139 228 A n 140 229 A n 141 230 A n 142 231 A n 1 90 B n 2 91 B n 3 92 B n 4 93 B n 5 94 B n 6 95 B n 7 96 B n 8 97 B n 9 98 B n 10 99 B n 11 100 B n 12 101 B n 13 102 B n 14 103 B n 15 104 B n 16 105 B n 17 106 B n 18 107 B n 19 108 B n 20 109 B n 21 110 B n 22 111 B n 23 112 B n 24 113 B n 25 114 B n 26 115 B n 27 116 B n 28 117 B n 29 118 B n 30 119 B n 31 120 B n 32 121 B n 33 122 B n 34 123 B n 35 124 B n 36 125 B GLY 126 n 37 GLY 126 B GLY 127 n 38 GLY 127 B TYR 128 n 39 TYR 128 B VAL 129 n 40 VAL 129 B LEU 130 n 41 LEU 130 B GLY 131 n 42 GLY 131 B SER 132 n 43 SER 132 B ALA 133 n 44 ALA 133 B MET 134 n 45 MET 134 B SER 135 n 46 SER 135 B ARG 136 n 47 ARG 136 B PRO 137 n 48 PRO 137 B ILE 138 n 49 ILE 138 B ILE 139 n 50 ILE 139 B HIS 140 n 51 HIS 140 B PHE 141 n 52 PHE 141 B GLY 142 n 53 GLY 142 B SER 143 n 54 SER 143 B ASP 144 n 55 ASP 144 B TYR 145 n 56 TYR 145 B GLU 146 n 57 GLU 146 B ASP 147 n 58 ASP 147 B ARG 148 n 59 ARG 148 B TYR 149 n 60 TYR 149 B TYR 150 n 61 TYR 150 B ARG 151 n 62 ARG 151 B GLU 152 n 63 GLU 152 B ASN 153 n 64 ASN 153 B MET 154 n 65 MET 154 B HIS 155 n 66 HIS 155 B ARG 156 n 67 ARG 156 B TYR 157 n 68 TYR 157 B PRO 158 n 69 PRO 158 B ASN 159 n 70 ASN 159 B GLN 160 n 71 GLN 160 B VAL 161 n 72 VAL 161 B TYR 162 n 73 TYR 162 B TYR 163 n 74 TYR 163 B ARG 164 n 75 ARG 164 B PRO 165 n 76 PRO 165 B MET 166 n 77 MET 166 B ASP 167 n 78 ASP 167 B GLU 168 n 79 GLU 168 B TYR 169 n 80 TYR 169 B SER 170 n 81 SER 170 B ASN 171 n 82 ASN 171 B GLN 172 n 83 GLN 172 B ASN 173 n 84 ASN 173 B ASN 174 n 85 ASN 174 B PHE 175 n 86 PHE 175 B VAL 176 n 87 VAL 176 B HIS 177 n 88 HIS 177 B ASP 178 n 89 ASP 178 B CYS 179 n 90 CYS 179 B VAL 180 n 91 VAL 180 B ASN 181 n 92 ASN 181 B ILE 182 n 93 ILE 182 B THR 183 n 94 THR 183 B ILE 184 n 95 ILE 184 B LYS 185 n 96 LYS 185 B GLN 186 n 97 GLN 186 B HIS 187 n 98 HIS 187 B THR 188 n 99 THR 188 B VAL 189 n 100 VAL 189 B THR 190 n 101 THR 190 B n 102 191 B n 103 192 B n 104 193 B n 105 194 B n 106 195 B n 107 196 B n 108 197 B SER 198 n 109 SER 198 B THR 199 n 110 THR 199 B GLU 200 n 111 GLU 200 B THR 201 n 112 THR 201 B ASP 202 n 113 ASP 202 B VAL 203 n 114 VAL 203 B LYS 204 n 115 LYS 204 B MET 205 n 116 MET 205 B MET 206 n 117 MET 206 B GLU 207 n 118 GLU 207 B ARG 208 n 119 ARG 208 B VAL 209 n 120 VAL 209 B VAL 210 n 121 VAL 210 B GLU 211 n 122 GLU 211 B GLN 212 n 123 GLN 212 B MET 213 n 124 MET 213 B CYS 214 n 125 CYS 214 B ILE 215 n 126 ILE 215 B THR 216 n 127 THR 216 B GLN 217 n 128 GLN 217 B TYR 218 n 129 TYR 218 B GLU 219 n 130 GLU 219 B ARG 220 n 131 ARG 220 B GLU 221 n 132 GLU 221 B SER 222 n 133 SER 222 B GLN 223 n 134 GLN 223 B ALA 224 n 135 ALA 224 B TYR 225 n 136 TYR 225 B TYR 226 n 137 TYR 226 B GLN 227 n 138 GLN 227 B n 139 228 B n 140 229 B n 141 230 B n 142 231 B software_defined_assembly PISA 2 dimeric author_defined_assembly 1 monomeric author_defined_assembly 1 monomeric 1890 -15 11090 A HIS 140 A ND1 HIS 51 1_555 A CD 300 C CD CD 1_555 A ASP 147 A OD1 ASP 58 1_555 160.9 A HIS 140 A ND1 HIS 51 1_555 A CD 300 C CD CD 1_555 A ASP 147 A OD2 ASP 58 1_555 109.6 A ASP 147 A OD1 ASP 58 1_555 A CD 300 C CD CD 1_555 A ASP 147 A OD2 ASP 58 1_555 54.7 A HIS 140 A ND1 HIS 51 1_555 A CD 300 C CD CD 1_555 A HOH 324 E O HOH 1_555 98.0 A ASP 147 A OD1 ASP 58 1_555 A CD 300 C CD CD 1_555 A HOH 324 E O HOH 1_555 91.8 A ASP 147 A OD2 ASP 58 1_555 A CD 300 C CD CD 1_555 A HOH 324 E O HOH 1_555 85.4 A HIS 140 A ND1 HIS 51 1_555 A CD 300 C CD CD 1_555 A HOH 325 E O HOH 1_555 84.8 A ASP 147 A OD1 ASP 58 1_555 A CD 300 C CD CD 1_555 A HOH 325 E O HOH 1_555 84.4 A ASP 147 A OD2 ASP 58 1_555 A CD 300 C CD CD 1_555 A HOH 325 E O HOH 1_555 90.1 A HOH 324 E O HOH 1_555 A CD 300 C CD CD 1_555 A HOH 325 E O HOH 1_555 175.3 B HIS 140 B ND1 HIS 51 1_555 B CD 301 D CD CD 1_555 B ASP 147 B OD1 ASP 58 1_555 162.9 B HIS 140 B ND1 HIS 51 1_555 B CD 301 D CD CD 1_555 B ASP 147 B OD2 ASP 58 1_555 116.9 B ASP 147 B OD1 ASP 58 1_555 B CD 301 D CD CD 1_555 B ASP 147 B OD2 ASP 58 1_555 51.0 B HIS 140 B ND1 HIS 51 1_555 B CD 301 D CD CD 1_555 B HOH 438 F O HOH 1_555 85.9 B ASP 147 B OD1 ASP 58 1_555 B CD 301 D CD CD 1_555 B HOH 438 F O HOH 1_555 79.3 B ASP 147 B OD2 ASP 58 1_555 B CD 301 D CD CD 1_555 B HOH 438 F O HOH 1_555 75.7 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 5_654 -x+3/2,y+1/2,-z-1/4 crystal symmetry operation 86.4165000000 28.8055000000 -40.8342500000 A N VAL 129 A N VAL 40 A O TYR 163 A O TYR 74 B N VAL 129 B N VAL 40 B O TYR 163 B O TYR 74 1 A GLY 90 A GLY 1 1 Y 1 A GLN 91 A GLN 2 1 Y 1 A GLY 92 A GLY 3 1 Y 1 A GLY 93 A GLY 4 1 Y 1 A GLY 94 A GLY 5 1 Y 1 A THR 95 A THR 6 1 Y 1 A HIS 96 A HIS 7 1 Y 1 A SER 97 A SER 8 1 Y 1 A GLN 98 A GLN 9 1 Y 1 A TRP 99 A TRP 10 1 Y 1 A ASN 100 A ASN 11 1 Y 1 A LYS 101 A LYS 12 1 Y 1 A PRO 102 A PRO 13 1 Y 1 A SER 103 A SER 14 1 Y 1 A LYS 104 A LYS 15 1 Y 1 A PRO 105 A PRO 16 1 Y 1 A LYS 106 A LYS 17 1 Y 1 A THR 107 A THR 18 1 Y 1 A ASN 108 A ASN 19 1 Y 1 A MET 109 A MET 20 1 Y 1 A LYS 110 A LYS 21 1 Y 1 A HIS 111 A HIS 22 1 Y 1 A MET 112 A MET 23 1 Y 1 A ALA 113 A ALA 24 1 Y 1 A GLY 114 A GLY 25 1 Y 1 A ALA 115 A ALA 26 1 Y 1 A ALA 116 A ALA 27 1 Y 1 A ALA 117 A ALA 28 1 Y 1 A ALA 118 A ALA 29 1 Y 1 A GLY 119 A GLY 30 1 Y 1 A ALA 120 A ALA 31 1 Y 1 A VAL 121 A VAL 32 1 Y 1 A VAL 122 A VAL 33 1 Y 1 A GLY 123 A GLY 34 1 Y 1 A GLY 124 A GLY 35 1 Y 1 A THR 193 A THR 104 1 Y 1 A LYS 194 A LYS 105 1 Y 1 A GLY 195 A GLY 106 1 Y 1 A GLU 196 A GLU 107 1 Y 1 A ASN 197 A ASN 108 1 Y 1 A GLN 227 A GLN 138 1 Y 1 A ARG 228 A ARG 139 1 Y 1 A GLY 229 A GLY 140 1 Y 1 A SER 230 A SER 141 1 Y 1 A SER 231 A SER 142 1 Y 1 B GLY 90 B GLY 1 1 Y 1 B GLN 91 B GLN 2 1 Y 1 B GLY 92 B GLY 3 1 Y 1 B GLY 93 B GLY 4 1 Y 1 B GLY 94 B GLY 5 1 Y 1 B THR 95 B THR 6 1 Y 1 B HIS 96 B HIS 7 1 Y 1 B SER 97 B SER 8 1 Y 1 B GLN 98 B GLN 9 1 Y 1 B TRP 99 B TRP 10 1 Y 1 B ASN 100 B ASN 11 1 Y 1 B LYS 101 B LYS 12 1 Y 1 B PRO 102 B PRO 13 1 Y 1 B SER 103 B SER 14 1 Y 1 B LYS 104 B LYS 15 1 Y 1 B PRO 105 B PRO 16 1 Y 1 B LYS 106 B LYS 17 1 Y 1 B THR 107 B THR 18 1 Y 1 B ASN 108 B ASN 19 1 Y 1 B MET 109 B MET 20 1 Y 1 B LYS 110 B LYS 21 1 Y 1 B HIS 111 B HIS 22 1 Y 1 B MET 112 B MET 23 1 Y 1 B ALA 113 B ALA 24 1 Y 1 B GLY 114 B GLY 25 1 Y 1 B ALA 115 B ALA 26 1 Y 1 B ALA 116 B ALA 27 1 Y 1 B ALA 117 B ALA 28 1 Y 1 B ALA 118 B ALA 29 1 Y 1 B GLY 119 B GLY 30 1 Y 1 B ALA 120 B ALA 31 1 Y 1 B VAL 121 B VAL 32 1 Y 1 B VAL 122 B VAL 33 1 Y 1 B GLY 123 B GLY 34 1 Y 1 B GLY 124 B GLY 35 1 Y 1 B LEU 125 B LEU 36 1 Y 1 B THR 191 B THR 102 1 Y 1 B THR 192 B THR 103 1 Y 1 B THR 193 B THR 104 1 Y 1 B LYS 194 B LYS 105 1 Y 1 B GLY 195 B GLY 106 1 Y 1 B GLU 196 B GLU 107 1 Y 1 B ASN 197 B ASN 108 1 Y 1 B ARG 228 B ARG 139 1 Y 1 B GLY 229 B GLY 140 1 Y 1 B SER 230 B SER 141 1 Y 1 B SER 231 B SER 142 1 Y 1 A A OG1 O THR HOH 188 358 2.10 1 A A OE1 O GLN HOH 212 375 2.16 A 1 A B NH1 OE1 ARG GLU 208 211 2.07 A 1_555 5_654 1 A B N OE1 GLY GLU 142 207 2.08 1_555 5_654 77.88 35.107 17.17 0.000 0.000 0.000 0.000 0.000 0.000 0.940 0.917 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. U VALUES: REFINED INDIVIDUALLY 0.265 0.226 0.227 1.850 28.810 1217 24056 5.100 98.430 1.00 0.50 2.885 0.090 RANDOM 1 THROUGHOUT 0.00 MOLECULAR REPLACEMENT 0.145 0.141 0.800 0.800 1.400 MAXIMUM LIKELIHOOD MASK 1.850 28.810 138 1794 2 0 1654 0.013 0.021 1701 1.409 1.924 2308 4.902 5.000 200 34.554 23.810 105 15.169 15.000 292 15.931 15.000 15 0.095 0.200 233 0.006 0.021 1361 1.091 1.500 974 2.016 2.000 1594 2.782 3.000 727 4.511 4.500 708 0.304 0.259 1.899 99 1602 1701 20 97.530 1.850 50.000 3HER 24056 0.039 1.028 1 33.439 5.800 91.700 0.447 1.85 1.92 2056 1.102 5.90 86.20 0.293 1.92 1.99 2050 1.064 5.70 86.40 0.186 1.99 2.08 2056 1.077 5.60 86.20 0.135 2.08 2.19 2078 1.057 5.40 86.70 0.098 2.19 2.33 2123 1.040 5.20 87.90 0.083 2.33 2.51 2205 1.006 4.90 91.30 0.071 2.51 2.76 2320 0.959 5.00 95.50 0.049 2.76 3.16 2397 1.017 5.30 97.60 0.030 3.16 3.99 2483 0.914 6.20 99.40 0.025 3.99 50.00 2660 1.052 8.50 98.70 data reduction Zbyszek Otwinowski hkl@hkl-xray.com http://www.hkl-xray.com/ DENZO package data scaling Zbyszek Otwinowski hkl@hkl-xray.com http://www.hkl-xray.com/ SCALEPACK package refinement Garib N. Murshudov garib@ysbl.york.ac.uk Fortran_77 http://www.ccp4.ac.uk/dist/html/refmac5.html REFMAC program 5.5.0066 data extraction PDB help@deposit.rcsb.org June 11, 2008 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.005 data collection HKL-2000 data reduction HKL-2000 data scaling HKL-2000 phasing MOLREP Human prion protein variant F198S with V129 1 N N 1 N N 2 N N 2 N N 3 N N 3 N N A SER 143 A SER 54 HELX_P A MET 154 A MET 65 1 1 12 A HIS 155 A HIS 66 HELX_P A TYR 157 A TYR 68 5 2 3 A ASN 171 A ASN 82 HELX_P A THR 191 A THR 102 1 3 21 A THR 199 A THR 110 HELX_P A GLN 223 A GLN 134 1 4 25 B SER 143 B SER 54 HELX_P B MET 154 B MET 65 1 5 12 B HIS 155 B HIS 66 HELX_P B TYR 157 B TYR 68 5 6 3 B ASN 171 B ASN 82 HELX_P B THR 190 B THR 101 1 7 20 B THR 199 B THR 110 HELX_P B GLN 227 B GLN 138 1 8 29 disulf 2.069 A CYS 179 A SG CYS 90 1_555 A CYS 214 A SG CYS 125 1_555 disulf 2.063 B CYS 179 B SG CYS 90 1_555 B CYS 214 B SG CYS 125 1_555 metalc 2.301 A HIS 140 A ND1 HIS 51 1_555 A CD 300 C CD CD 1_555 metalc 2.375 A ASP 147 A OD1 ASP 58 1_555 A CD 300 C CD CD 1_555 metalc 2.370 A ASP 147 A OD2 ASP 58 1_555 A CD 300 C CD CD 1_555 metalc 2.472 A CD 300 C CD CD 1_555 A HOH 324 E O HOH 1_555 metalc 2.506 A CD 300 C CD CD 1_555 A HOH 325 E O HOH 1_555 metalc 2.033 B HIS 140 B ND1 HIS 51 1_555 B CD 301 D CD CD 1_555 metalc 2.582 B ASP 147 B OD1 ASP 58 1_555 B CD 301 D CD CD 1_555 metalc 2.519 B ASP 147 B OD2 ASP 58 1_555 B CD 301 D CD CD 1_555 metalc 2.620 B CD 301 D CD CD 1_555 B HOH 438 F O HOH 1_555 MEMBRANE PROTEIN Prion Protein, Cell membrane, Disease mutation, Disulfide bond, Glycoprotein, Golgi apparatus, GPI-anchor, Lipoprotein, Membrane, Polymorphism, Prion, MEMBRANE PROTEIN PRIO_HUMAN UNP 1 90 P04156 GQGGGTHSQWNKPSKPKTNMKHMAGAAAAGAVVGGLGGYMLGSAMSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPMDEY SNQNNFVHDCVNITIKQHTVTTTTKGENFTETDVKMMERVVEQMCITQYERESQAYYQRGSS 90 231 3HER 90 231 P04156 A 1 1 142 90 231 3HER 90 231 P04156 B 1 1 142 1 MET variant VAL 129 3HER A P04156 UNP 129 40 1 PHE engineered mutation SER 198 3HER A P04156 UNP 198 109 2 MET variant VAL 129 3HER B P04156 UNP 129 40 2 PHE engineered mutation SER 198 3HER B P04156 UNP 198 109 2 2 anti-parallel anti-parallel A VAL 129 A VAL 40 A LEU 130 A LEU 41 A TYR 162 A TYR 73 A TYR 163 A TYR 74 B VAL 129 B VAL 40 B LEU 130 B LEU 41 B TYR 162 B TYR 73 B TYR 163 B TYR 74 BINDING SITE FOR RESIDUE CD A 300 A CD 300 Software 5 BINDING SITE FOR RESIDUE CD B 301 B CD 301 Software 4 A HIS 140 A HIS 51 5 1_555 A ASP 147 A ASP 58 5 1_555 A HOH 324 E HOH 5 1_555 A HOH 325 E HOH 5 1_555 B HIS 177 B HIS 88 5 5_654 A HIS 177 A HIS 88 4 5_644 B HIS 140 B HIS 51 4 1_555 B ASP 147 B ASP 58 4 1_555 B HOH 438 F HOH 4 1_555 96 P 43 21 2