0.017850 0.000000 0.000000 0.000000 0.014635 0.000000 0.000000 0.000000 0.007254 0.00000 0.00000 0.00000 Garcia-Diaz, M. Bebenek, K. Larrea, A.A. Pedersen, L.C. Kunkel, T.A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.000 90.000 90.000 56.023 68.328 137.850 C10 H15 N2 O7 P 306.209 n 3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE 2',3'-DIDEOXYTHYMIDINE-5'-MONOPHOSPHATE DNA linking C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H17 N2 O13 P3 466.169 n 2',3'-DIDEOXY-THYMIDINE-5'-TRIPHOSPHATE DNA OH 3 prime terminus C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C2 H6 O2 62.068 1,2-ETHANEDIOL ETHYLENE GLYCOL non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mg 2 24.305 MAGNESIUM ION non-polymer Na 1 22.990 SODIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N P N 2 N O N 3 N O N 4 N O N 5 N O N 6 N N N 7 N C N 8 N C N 9 N O N 10 N N N 11 N C N 12 N O N 13 N C N 14 N C N 15 N C N 16 N C N 17 S C N 18 N O N 19 R C N 20 N C N 21 N H N 22 N H N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N N N 37 S C N 38 N C N 39 N O N 40 N C N 41 N O N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N N N 50 S C N 51 N C N 52 N O N 53 N C N 54 N C N 55 N C N 56 N N N 57 N C N 58 N N N 59 N N N 60 N O N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N N N 77 S C N 78 N C N 79 N O N 80 N C N 81 N C N 82 N O N 83 N N N 84 N O N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N N N 94 S C N 95 N C N 96 N O N 97 N C N 98 N C N 99 N O N 100 N O N 101 N O N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N N N 110 R C N 111 N C N 112 N O N 113 N C N 114 N S N 115 N O N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 R P N 124 N O N 125 N O N 126 N O N 127 N C N 128 S C N 129 N O N 130 R C N 131 N N N 132 N C N 133 N C N 134 N O N 135 N N N 136 N C N 137 N O N 138 N C N 139 N C N 140 N C N 141 N C N 142 N O N 143 R P N 144 N O N 145 N O N 146 N O N 147 N P N 148 N O N 149 N O N 150 N O N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N O N 169 N P N 170 N O N 171 N O N 172 N O N 173 N C N 174 R C N 175 N O N 176 S C N 177 N O N 178 N C N 179 R C Y 180 N N Y 181 N C Y 182 N N Y 183 N C Y 184 N C N 185 N N Y 186 N N Y 187 N C Y 188 N N Y 189 N C N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N O N 205 N P N 206 N O N 207 N O N 208 N O N 209 N C N 210 R C N 211 N O N 212 S C N 213 N O N 214 N C N 215 R C N 216 N N N 217 N C N 218 N O N 219 N N N 220 N C N 221 N N N 222 N C N 223 N C N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N O N 239 N P N 240 N O N 241 N O N 242 N O N 243 N C N 244 R C N 245 N O N 246 S C N 247 N O N 248 N C N 249 R C Y 250 N N Y 251 N C Y 252 N N Y 253 N C N 254 N C N 255 N O N 256 N N N 257 N C N 258 N N N 259 N N Y 260 N C N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N O N 276 N P N 277 N O N 278 N O N 279 N O N 280 N C N 281 R C N 282 N O N 283 S C N 284 N O N 285 N C N 286 R C N 287 N N N 288 N C N 289 N O N 290 N N N 291 N C N 292 N O N 293 N C N 294 N C N 295 N C N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N C N 312 N O N 313 N C N 314 N O N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C N 326 N C N 327 N C N 328 N O N 329 N N N 330 N O N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N N N 342 S C N 343 N C N 344 N O N 345 N C N 346 N C N 347 N C N 348 N O N 349 N O N 350 N O N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N N N 361 N C N 362 N C N 363 N O N 364 N O N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N N N 371 S C N 372 N C N 373 N O N 374 N C Y 375 N C Y 376 N N Y 377 N C Y 378 N C Y 379 N N N 380 N O N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N O N 392 N H N 393 N H N 394 N N N 395 S C N 396 N C N 397 N O N 398 S C N 399 N C N 400 N C N 401 N C N 402 N O N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N N N 417 S C N 418 N C N 419 N O N 420 N C N 421 N C N 422 N C N 423 N C N 424 N O N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N N N 439 S C N 440 N C N 441 N O N 442 N C N 443 N C N 444 N C N 445 N C N 446 N N N 447 N O N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N N N 464 S C N 465 N C N 466 N O N 467 N C N 468 N C N 469 N S N 470 N C N 471 N O N 472 N H N 473 N H N 474 N H N 475 N H N 476 N H N 477 N H N 478 N H N 479 N H N 480 N H N 481 N H N 482 N H N 483 N MG N 484 N NA N 485 N N N 486 S C N 487 N C N 488 N O N 489 N C Y 490 N C Y 491 N C Y 492 N C Y 493 N C Y 494 N C Y 495 N C N 496 N O N 497 N H N 498 N H N 499 N H N 500 N H N 501 N H N 502 N H N 503 N H N 504 N H N 505 N H N 506 N H N 507 N H N 508 N N N 509 S C N 510 N C N 511 N O N 512 N C N 513 N C N 514 N C N 515 N O N 516 N H N 517 N H N 518 N H N 519 N H N 520 N H N 521 N H N 522 N H N 523 N H N 524 N H N 525 N N N 526 S C N 527 N C N 528 N O N 529 N C N 530 N O N 531 N O N 532 N H N 533 N H N 534 N H N 535 N H N 536 N H N 537 N H N 538 N H N 539 N N N 540 S C N 541 N C N 542 N O N 543 R C N 544 N O N 545 N C N 546 N O N 547 N H N 548 N H N 549 N H N 550 N H N 551 N H N 552 N H N 553 N H N 554 N H N 555 N H N 556 N N N 557 S C N 558 N C N 559 N O N 560 N C Y 561 N C Y 562 N C Y 563 N C Y 564 N N Y 565 N C Y 566 N C Y 567 N C Y 568 N C Y 569 N C N 570 N O N 571 N H N 572 N H N 573 N H N 574 N H N 575 N H N 576 N H N 577 N H N 578 N H N 579 N H N 580 N H N 581 N H N 582 N H N 583 N N N 584 S C N 585 N C N 586 N O N 587 N C Y 588 N C Y 589 N C Y 590 N C Y 591 N C Y 592 N C Y 593 N C N 594 N O N 595 N O N 596 N H N 597 N H N 598 N H N 599 N H N 600 N H N 601 N H N 602 N H N 603 N H N 604 N H N 605 N H N 606 N H N 607 N N N 608 S C N 609 N C N 610 N O N 611 N C N 612 N C N 613 N C N 614 N O N 615 N H N 616 N H N 617 N H N 618 N H N 619 N H N 620 N H N 621 N H N 622 N H N 623 N H N 624 N H N 625 N H N 1 N doub N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N doub N 12 N sing N 13 N doub N 14 N sing N 15 N sing N 16 N sing N 17 N doub N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N doub N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N doub N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N doub N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N doub N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N doub N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N doub N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N doub N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N doub N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N doub N 138 N sing N 139 N doub N 140 N sing N 141 N sing N 142 N sing N 143 N doub N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N doub N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N doub N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N doub N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing Y 188 N sing Y 189 N sing Y 190 N doub N 191 N sing Y 192 N sing Y 193 N sing Y 194 N doub N 195 N sing Y 196 N doub N 197 N sing N 198 N sing Y 199 N sing Y 200 N doub N 201 N sing Y 202 N sing N 203 N sing N 204 N sing N 205 N doub N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N doub N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N doub N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N doub N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing Y 261 N sing Y 262 N sing Y 263 N doub N 264 N sing Y 265 N sing N 266 N sing Y 267 N doub N 268 N doub N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N doub N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N doub N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N doub N 303 N sing N 304 N sing N 305 N sing N 306 N doub N 307 N sing N 308 N sing N 309 N doub N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N doub N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N doub N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N doub N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N doub N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N doub N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N doub N 376 N sing N 377 N sing N 378 N sing N 379 N sing Y 380 N sing Y 381 N doub Y 382 N doub N 383 N sing Y 384 N sing N 385 N sing Y 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N doub N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N doub N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N doub N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N doub N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N sing N 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N doub N 484 N sing N 485 N sing N 486 N sing N 487 N sing Y 488 N doub Y 489 N sing Y 490 N sing N 491 N sing Y 492 N doub N 493 N sing Y 494 N doub N 495 N sing Y 496 N sing N 497 N sing N 498 N sing N 499 N sing N 500 N sing N 501 N sing N 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N doub N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N sing N 512 N sing N 513 N sing N 514 N sing N 515 N sing N 516 N sing N 517 N sing N 518 N sing N 519 N sing N 520 N sing N 521 N sing N 522 N sing N 523 N doub N 524 N sing N 525 N sing N 526 N sing N 527 N sing N 528 N sing N 529 N sing N 530 N sing N 531 N sing N 532 N sing N 533 N sing N 534 N sing N 535 N sing N 536 N doub N 537 N sing N 538 N sing N 539 N sing N 540 N sing N 541 N sing N 542 N sing N 543 N sing N 544 N sing N 545 N sing N 546 N sing N 547 N sing N 548 N sing N 549 N sing N 550 N sing N 551 N sing N 552 N doub N 553 N sing N 554 N sing N 555 N sing N 556 N sing Y 557 N doub Y 558 N sing Y 559 N sing N 560 N sing Y 561 N doub Y 562 N sing Y 563 N sing N 564 N sing Y 565 N sing Y 566 N doub N 567 N sing Y 568 N doub N 569 N sing Y 570 N sing N 571 N sing N 572 N sing N 573 N sing N 574 N sing N 575 N sing N 576 N sing N 577 N sing N 578 N sing N 579 N sing N 580 N doub N 581 N sing N 582 N sing N 583 N sing N 584 N sing Y 585 N doub Y 586 N sing Y 587 N sing N 588 N sing Y 589 N doub N 590 N sing Y 591 N doub N 592 N sing Y 593 N sing N 594 N sing N 595 N sing N 596 N sing N 597 N sing N 598 N sing N 599 N sing N 600 N sing N 601 N sing N 602 N sing N 603 N sing N 604 N doub N 605 N sing N 606 N sing N 607 N sing N 608 N sing N 609 N sing N 610 N sing N 611 N sing N 612 N sing N 613 N sing N 614 N sing N 615 N sing To be Published 0353 Scrunching during DNA repair synthesis 10.2210/pdb3hwt/pdb pdb_00003hwt 100 1 CCD 2005-07-22 MAR CCD 165 mm SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU MICROMAX-007 HF 37447.688 DNA polymerase lambda 2.7.7.7, 4.2.99.- UNP residues 242-575 C543A 1 man polymer 3671.418 5'-D(*CP*GP*GP*CP*AP*AP*AP*TP*AP*CP*TP*G)-3' 1 syn polymer 1792.230 5'-D(*CP*AP*GP*TP*AP*(2DT))-3' 1 syn polymer 1191.818 5'-D(P*GP*CP*CP*G)-3' 1 syn polymer 466.169 2',3'-DIDEOXY-THYMIDINE-5'-TRIPHOSPHATE 1 syn non-polymer 24.305 MAGNESIUM ION 1 syn non-polymer 22.990 SODIUM ION 1 syn non-polymer 62.068 1,2-ETHANEDIOL 1 syn non-polymer 18.015 water 351 nat water Pol Lambda, DNA polymerase kappa, DNA polymerase beta-2, Pol beta2 no no MAQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESG HLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQ KAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLP GPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGAKVGPGRVLPTPTEKDVF RLLGLPYREPAERDW MAQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESG HLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQ KAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLP GPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGAKVGPGRVLPTPTEKDVF RLLGLPYREPAERDW A polypeptide(L) no no (DC)(DG)(DG)(DC)(DA)(DA)(DA)(DT)(DA)(DC)(DT)(DG) CGGCAAATACTG T polydeoxyribonucleotide no yes (DC)(DA)(DG)(DT)(DA)(2DT) CAGTAT P polydeoxyribonucleotide no no (DG)(DC)(DC)(DG) GCCG D polydeoxyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human BL21(DE3)RILP sample POLL 9606 Homo sapiens 562 Escherichia coli pET 1 2.99 58.88 VAPOR DIFFUSION, HANGING DROP 5.5 19% 2-propanol, ).1 M Na Cacodylate, pH 5.5, Na Citrate 0.2M, VAPOR DIFFUSION, HANGING DROP, temperature 277K 277 -16.589 1 19 T 1 D 4 -3.562 T_DC1:DG4_D 1 -1.655 -0.030 0.228 -0.221 0.382 1 19 T 2 D 3 -3.255 T_DG2:DC3_D 2 2.852 -0.169 -0.097 -0.212 12.353 1 19 T 3 D 2 -2.162 T_DG3:DC2_D 3 0.192 -0.183 0.346 -0.032 9.112 1 19 T 4 D 1 -1.967 T_DC4:DG1_D 4 -8.593 0.264 -0.258 -0.127 2.643 1 20 T 7 P 6 2.723 T_DA7:2DT6_P 5 -1.978 -0.033 0.072 -0.195 3.868 1 20 T 8 P 5 1.182 T_DT8:DA5_P 6 -10.140 -0.029 -0.242 -0.079 -9.183 1 20 T 9 P 4 1.463 T_DA9:DT4_P 7 -4.010 -0.027 -0.317 0.044 3.817 1 19 T 10 P 3 -1.917 T_DC10:DG3_P 8 -6.583 0.071 -0.050 -0.030 7.312 1 20 T 11 P 2 3.193 T_DT11:DA2_P 9 -8.773 -0.091 -0.090 -0.030 19.388 1 19 T 12 P 1 -0.711 T_DG12:DC1_P 10 -12.225 -0.159 0.221 -0.096 3.089 28.285 T T 1 2 9.013 D D 4 3 2.970 4.370 1.001 0.233 TT_DC1DG2:DC3DG4_DD 1 4.440 -9.157 27.605 -0.473 -1.083 3.155 34.381 T T 2 3 1.572 D D 3 2 3.099 0.926 -0.588 0.240 TT_DG2DG3:DC2DC3_DD 2 -4.809 8.161 34.041 0.266 0.273 3.325 37.311 T T 3 4 8.436 D D 2 1 3.467 5.373 0.434 -0.950 TT_DG3DC4:DG1DC2_DD 3 3.318 -5.209 36.792 -2.228 -0.219 3.303 31.459 T T 7 8 4.991 P P 6 5 3.353 2.702 0.594 -0.685 TT_DA7DT8:DA52DT6_PP 4 1.125 -2.077 31.326 -1.779 -0.881 3.207 38.753 T T 8 9 16.760 P P 5 4 3.583 10.976 -0.636 -0.754 TT_DT8DA9:DT4DA5_PP 5 1.909 -2.915 37.176 -2.561 1.206 2.939 31.197 T T 9 10 7.675 P P 4 3 3.000 4.114 -0.742 -0.518 TT_DA9DC10:DG3DT4_PP 6 -1.490 2.779 30.896 -1.676 1.121 3.210 30.987 T T 10 11 4.740 P P 3 2 3.266 2.528 -0.122 -0.427 TT_DC10DT11:DA2DG3_PP 7 1.745 -3.271 30.838 -1.284 0.562 3.135 34.880 T T 11 12 22.922 P P 2 1 3.104 13.400 0.463 0.761 TT_DT11DG12:DC1DA2_PP 8 -1.890 3.233 32.223 -0.751 -1.058 software database_2 pdbx_struct_conn_angle struct_conn struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond pdbx_initial_refinement_model repository Initial release Version format compliance Derived calculations Refinement description Database references Derived calculations Data collection Refinement description 1 0 2009-08-25 1 1 2011-07-13 1 2 2013-09-25 1 3 2017-11-01 1 4 2021-10-13 1 5 2023-09-06 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2009-06-18 REL REL D3T 2',3'-DIDEOXY-THYMIDINE-5'-TRIPHOSPHATE MG MAGNESIUM ION NA SODIUM ION EDO 1,2-ETHANEDIOL HOH water Chemical synthesis sample Chemical synthesis sample Chemical synthesis sample 1XSN PDB ENTRY 1XSN PDB experimental model D3T 338 5 D3T D3T 576 A MG 168 6 MG MG 168 A NA 169 7 NA NA 169 A EDO 2801 8 EDO EDO 2801 A TIP 4 9 HOH HOH 4 A TIP 5 9 HOH HOH 5 A TIP 6 9 HOH HOH 6 A TIP 8 9 HOH HOH 8 A TIP 10 9 HOH HOH 10 A TIP 11 9 HOH HOH 11 A TIP 13 9 HOH HOH 13 A TIP 15 9 HOH HOH 15 A TIP 16 9 HOH HOH 16 A TIP 18 9 HOH HOH 18 A TIP 19 9 HOH HOH 19 A TIP 22 9 HOH HOH 22 A TIP 26 9 HOH HOH 26 A TIP 28 9 HOH HOH 28 A TIP 29 9 HOH HOH 29 A TIP 30 9 HOH HOH 30 A TIP 31 9 HOH HOH 31 A TIP 34 9 HOH HOH 34 A TIP 35 9 HOH HOH 35 A TIP 37 9 HOH HOH 37 A TIP 38 9 HOH HOH 38 A TIP 39 9 HOH HOH 39 A TIP 40 9 HOH HOH 40 A TIP 41 9 HOH HOH 41 A TIP 44 9 HOH HOH 44 A TIP 46 9 HOH HOH 46 A TIP 47 9 HOH HOH 47 A TIP 48 9 HOH HOH 48 A TIP 51 9 HOH HOH 51 A TIP 52 9 HOH HOH 52 A TIP 53 9 HOH HOH 53 A TIP 57 9 HOH HOH 57 A TIP 59 9 HOH HOH 59 A TIP 60 9 HOH HOH 60 A TIP 62 9 HOH HOH 62 A TIP 63 9 HOH HOH 63 A TIP 64 9 HOH HOH 64 A TIP 66 9 HOH HOH 66 A TIP 67 9 HOH HOH 67 A TIP 68 9 HOH HOH 68 A TIP 70 9 HOH HOH 70 A TIP 71 9 HOH HOH 71 A TIP 73 9 HOH HOH 73 A TIP 74 9 HOH HOH 74 A TIP 75 9 HOH HOH 75 A TIP 79 9 HOH HOH 79 A TIP 80 9 HOH HOH 80 A TIP 82 9 HOH HOH 82 A TIP 83 9 HOH HOH 83 A TIP 84 9 HOH HOH 84 A TIP 85 9 HOH HOH 85 A TIP 86 9 HOH HOH 86 A TIP 90 9 HOH HOH 90 A TIP 91 9 HOH HOH 91 A TIP 92 9 HOH HOH 92 A TIP 95 9 HOH HOH 95 A TIP 96 9 HOH HOH 96 A TIP 98 9 HOH HOH 98 A TIP 99 9 HOH HOH 99 A TIP 100 9 HOH HOH 100 A TIP 101 9 HOH HOH 101 A TIP 103 9 HOH HOH 103 A TIP 104 9 HOH HOH 104 A TIP 105 9 HOH HOH 105 A TIP 106 9 HOH HOH 106 A TIP 109 9 HOH HOH 109 A TIP 111 9 HOH HOH 111 A TIP 114 9 HOH HOH 114 A TIP 115 9 HOH HOH 115 A TIP 116 9 HOH HOH 116 A TIP 118 9 HOH HOH 118 A TIP 119 9 HOH HOH 119 A TIP 120 9 HOH HOH 120 A TIP 121 9 HOH HOH 121 A TIP 122 9 HOH HOH 122 A TIP 123 9 HOH HOH 123 A TIP 124 9 HOH HOH 124 A TIP 131 9 HOH HOH 131 A TIP 132 9 HOH HOH 132 A TIP 135 9 HOH HOH 135 A TIP 136 9 HOH HOH 136 A TIP 137 9 HOH HOH 137 A TIP 138 9 HOH HOH 138 A TIP 139 9 HOH HOH 139 A TIP 142 9 HOH HOH 142 A TIP 143 9 HOH HOH 143 A TIP 144 9 HOH HOH 144 A TIP 146 9 HOH HOH 146 A TIP 147 9 HOH HOH 147 A TIP 148 9 HOH HOH 148 A TIP 149 9 HOH HOH 149 A TIP 150 9 HOH HOH 150 A TIP 151 9 HOH HOH 151 A TIP 154 9 HOH HOH 154 A TIP 155 9 HOH HOH 155 A TIP 158 9 HOH HOH 158 A TIP 160 9 HOH HOH 160 A TIP 161 9 HOH HOH 161 A TIP 162 9 HOH HOH 162 A TIP 165 9 HOH HOH 165 A TIP 170 9 HOH HOH 170 A TIP 173 9 HOH HOH 173 A TIP 177 9 HOH HOH 177 A TIP 179 9 HOH HOH 179 A TIP 180 9 HOH HOH 180 A TIP 181 9 HOH HOH 181 A TIP 182 9 HOH HOH 182 A TIP 184 9 HOH HOH 184 A TIP 185 9 HOH HOH 185 A TIP 186 9 HOH HOH 186 A TIP 187 9 HOH HOH 187 A TIP 190 9 HOH HOH 190 A TIP 192 9 HOH HOH 192 A TIP 193 9 HOH HOH 193 A TIP 194 9 HOH HOH 194 A TIP 195 9 HOH HOH 195 A TIP 196 9 HOH HOH 196 A TIP 200 9 HOH HOH 200 A TIP 201 9 HOH HOH 201 A TIP 202 9 HOH HOH 202 A TIP 205 9 HOH HOH 205 A TIP 206 9 HOH HOH 206 A TIP 207 9 HOH HOH 207 A TIP 212 9 HOH HOH 212 A TIP 213 9 HOH HOH 213 A TIP 214 9 HOH HOH 214 A TIP 215 9 HOH HOH 215 A TIP 216 9 HOH HOH 216 A TIP 217 9 HOH HOH 217 A TIP 218 9 HOH HOH 218 A TIP 221 9 HOH HOH 221 A TIP 222 9 HOH HOH 222 A TIP 223 9 HOH HOH 223 A TIP 224 9 HOH HOH 224 A TIP 225 9 HOH HOH 225 A TIP 228 9 HOH HOH 228 A TIP 230 9 HOH HOH 230 A TIP 231 9 HOH HOH 231 A TIP 234 9 HOH HOH 234 A TIP 235 9 HOH HOH 235 A TIP 236 9 HOH HOH 236 A TIP 238 9 HOH HOH 238 A TIP 239 9 HOH HOH 239 A TIP 240 9 HOH HOH 240 A TIP 241 9 HOH HOH 577 A TIP 242 9 HOH HOH 578 A TIP 243 9 HOH HOH 579 A TIP 244 9 HOH HOH 580 A TIP 245 9 HOH HOH 581 A TIP 247 9 HOH HOH 582 A TIP 248 9 HOH HOH 583 A TIP 251 9 HOH HOH 584 A TIP 252 9 HOH HOH 585 A TIP 253 9 HOH HOH 586 A TIP 254 9 HOH HOH 587 A TIP 256 9 HOH HOH 588 A TIP 258 9 HOH HOH 589 A TIP 259 9 HOH HOH 590 A TIP 262 9 HOH HOH 591 A TIP 269 9 HOH HOH 592 A TIP 270 9 HOH HOH 593 A TIP 271 9 HOH HOH 594 A TIP 272 9 HOH HOH 595 A TIP 273 9 HOH HOH 596 A TIP 276 9 HOH HOH 597 A TIP 277 9 HOH HOH 598 A TIP 278 9 HOH HOH 599 A TIP 279 9 HOH HOH 600 A TIP 280 9 HOH HOH 601 A TIP 281 9 HOH HOH 602 A TIP 283 9 HOH HOH 603 A TIP 287 9 HOH HOH 604 A TIP 288 9 HOH HOH 605 A TIP 289 9 HOH HOH 606 A TIP 290 9 HOH HOH 607 A TIP 291 9 HOH HOH 608 A TIP 292 9 HOH HOH 609 A TIP 293 9 HOH HOH 610 A TIP 295 9 HOH HOH 611 A TIP 296 9 HOH HOH 612 A TIP 297 9 HOH HOH 613 A TIP 298 9 HOH HOH 614 A TIP 299 9 HOH HOH 615 A TIP 300 9 HOH HOH 616 A TIP 305 9 HOH HOH 617 A TIP 306 9 HOH HOH 618 A TIP 307 9 HOH HOH 619 A TIP 309 9 HOH HOH 620 A TIP 312 9 HOH HOH 621 A TIP 314 9 HOH HOH 622 A TIP 315 9 HOH HOH 623 A TIP 316 9 HOH HOH 624 A TIP 317 9 HOH HOH 625 A TIP 318 9 HOH HOH 626 A TIP 319 9 HOH HOH 627 A TIP 320 9 HOH HOH 628 A TIP 321 9 HOH HOH 629 A TIP 322 9 HOH HOH 630 A TIP 323 9 HOH HOH 631 A TIP 327 9 HOH HOH 632 A TIP 328 9 HOH HOH 633 A TIP 330 9 HOH HOH 634 A TIP 332 9 HOH HOH 635 A TIP 333 9 HOH HOH 636 A TIP 334 9 HOH HOH 637 A TIP 338 9 HOH HOH 638 A TIP 339 9 HOH HOH 639 A TIP 340 9 HOH HOH 640 A TIP 341 9 HOH HOH 641 A TIP 342 9 HOH HOH 642 A TIP 345 9 HOH HOH 643 A TIP 346 9 HOH HOH 644 A TIP 347 9 HOH HOH 645 A TIP 348 9 HOH HOH 646 A TIP 349 9 HOH HOH 647 A TIP 351 9 HOH HOH 648 A TIP 352 9 HOH HOH 649 A TIP 354 9 HOH HOH 650 A TIP 356 9 HOH HOH 651 A TIP 357 9 HOH HOH 652 A TIP 358 9 HOH HOH 653 A TIP 363 9 HOH HOH 654 A TIP 364 9 HOH HOH 655 A TIP 365 9 HOH HOH 656 A TIP 366 9 HOH HOH 657 A TIP 367 9 HOH HOH 658 A TIP 368 9 HOH HOH 659 A TIP 369 9 HOH HOH 660 A TIP 374 9 HOH HOH 661 A TIP 375 9 HOH HOH 662 A TIP 379 9 HOH HOH 663 A TIP 380 9 HOH HOH 664 A TIP 381 9 HOH HOH 665 A TIP 382 9 HOH HOH 666 A TIP 383 9 HOH HOH 667 A TIP 385 9 HOH HOH 668 A TIP 386 9 HOH HOH 669 A TIP 387 9 HOH HOH 670 A TIP 388 9 HOH HOH 671 A TIP 391 9 HOH HOH 672 A TIP 392 9 HOH HOH 673 A TIP 394 9 HOH HOH 674 A TIP 3 9 HOH HOH 13 T TIP 14 9 HOH HOH 14 T TIP 24 9 HOH HOH 24 T TIP 25 9 HOH HOH 25 T TIP 33 9 HOH HOH 33 T TIP 36 9 HOH HOH 36 T TIP 43 9 HOH HOH 43 T TIP 49 9 HOH HOH 49 T TIP 50 9 HOH HOH 50 T TIP 54 9 HOH HOH 54 T TIP 56 9 HOH HOH 56 T TIP 58 9 HOH HOH 58 T TIP 61 9 HOH HOH 61 T TIP 65 9 HOH HOH 65 T TIP 69 9 HOH HOH 69 T TIP 72 9 HOH HOH 72 T TIP 77 9 HOH HOH 77 T TIP 78 9 HOH HOH 78 T TIP 88 9 HOH HOH 88 T TIP 89 9 HOH HOH 89 T TIP 94 9 HOH HOH 94 T TIP 97 9 HOH HOH 97 T TIP 107 9 HOH HOH 107 T TIP 108 9 HOH HOH 108 T TIP 112 9 HOH HOH 112 T TIP 113 9 HOH HOH 113 T TIP 117 9 HOH HOH 117 T TIP 125 9 HOH HOH 125 T TIP 127 9 HOH HOH 127 T TIP 130 9 HOH HOH 130 T TIP 133 9 HOH HOH 133 T TIP 141 9 HOH HOH 141 T TIP 145 9 HOH HOH 145 T TIP 153 9 HOH HOH 153 T TIP 159 9 HOH HOH 159 T TIP 166 9 HOH HOH 166 T TIP 167 9 HOH HOH 167 T TIP 171 9 HOH HOH 171 T TIP 183 9 HOH HOH 183 T TIP 188 9 HOH HOH 188 T TIP 197 9 HOH HOH 197 T TIP 199 9 HOH HOH 199 T TIP 203 9 HOH HOH 203 T TIP 210 9 HOH HOH 210 T TIP 211 9 HOH HOH 211 T TIP 226 9 HOH HOH 226 T TIP 233 9 HOH HOH 233 T TIP 246 9 HOH HOH 246 T TIP 249 9 HOH HOH 249 T TIP 260 9 HOH HOH 260 T TIP 265 9 HOH HOH 265 T TIP 268 9 HOH HOH 268 T TIP 303 9 HOH HOH 303 T TIP 308 9 HOH HOH 308 T TIP 313 9 HOH HOH 313 T TIP 362 9 HOH HOH 362 T TIP 371 9 HOH HOH 371 T TIP 376 9 HOH HOH 376 T TIP 378 9 HOH HOH 378 T TIP 7 9 HOH HOH 7 P TIP 9 9 HOH HOH 9 P TIP 12 9 HOH HOH 12 P TIP 17 9 HOH HOH 17 P TIP 20 9 HOH HOH 20 P TIP 21 9 HOH HOH 21 P TIP 23 9 HOH HOH 23 P TIP 27 9 HOH HOH 27 P TIP 32 9 HOH HOH 32 P TIP 42 9 HOH HOH 42 P TIP 45 9 HOH HOH 45 P TIP 55 9 HOH HOH 55 P TIP 76 9 HOH HOH 76 P TIP 81 9 HOH HOH 81 P TIP 87 9 HOH HOH 87 P TIP 102 9 HOH HOH 102 P TIP 110 9 HOH HOH 110 P TIP 129 9 HOH HOH 129 P TIP 134 9 HOH HOH 134 P TIP 140 9 HOH HOH 140 P TIP 156 9 HOH HOH 156 P TIP 164 9 HOH HOH 164 P TIP 174 9 HOH HOH 174 P TIP 198 9 HOH HOH 198 P TIP 209 9 HOH HOH 209 P TIP 219 9 HOH HOH 219 P TIP 227 9 HOH HOH 227 P TIP 229 9 HOH HOH 229 P TIP 237 9 HOH HOH 237 P TIP 257 9 HOH HOH 257 P TIP 264 9 HOH HOH 264 P TIP 267 9 HOH HOH 267 P TIP 325 9 HOH HOH 325 P TIP 326 9 HOH HOH 326 P TIP 343 9 HOH HOH 343 P TIP 360 9 HOH HOH 360 P TIP 390 9 HOH HOH 390 P TIP 126 9 HOH HOH 126 D TIP 128 9 HOH HOH 128 D TIP 152 9 HOH HOH 152 D TIP 157 9 HOH HOH 157 D TIP 189 9 HOH HOH 189 D TIP 220 9 HOH HOH 220 D TIP 255 9 HOH HOH 255 D TIP 324 9 HOH HOH 324 D TIP 331 9 HOH HOH 331 D TIP 336 9 HOH HOH 336 D TIP 337 9 HOH HOH 337 D TIP 361 9 HOH HOH 361 D TIP 370 9 HOH HOH 370 D n 1 241 A n 2 242 A n 3 243 A n 4 244 A n 5 245 A n 6 246 A n 7 247 A n 8 248 A n 9 249 A n 10 250 A n 11 251 A n 12 252 A n 13 253 A n 14 254 A n 15 255 A n 16 256 A THR 257 n 17 THR 257 A GLU 258 n 18 GLU 258 A LYS 259 n 19 LYS 259 A LEU 260 n 20 LEU 260 A GLU 261 n 21 GLU 261 A VAL 262 n 22 VAL 262 A LEU 263 n 23 LEU 263 A ALA 264 n 24 ALA 264 A LYS 265 n 25 LYS 265 A ALA 266 n 26 ALA 266 A TYR 267 n 27 TYR 267 A SER 268 n 28 SER 268 A VAL 269 n 29 VAL 269 A GLN 270 n 30 GLN 270 A GLY 271 n 31 GLY 271 A ASP 272 n 32 ASP 272 A LYS 273 n 33 LYS 273 A TRP 274 n 34 TRP 274 A ARG 275 n 35 ARG 275 A ALA 276 n 36 ALA 276 A LEU 277 n 37 LEU 277 A GLY 278 n 38 GLY 278 A TYR 279 n 39 TYR 279 A ALA 280 n 40 ALA 280 A LYS 281 n 41 LYS 281 A ALA 282 n 42 ALA 282 A ILE 283 n 43 ILE 283 A ALA 284 n 44 ASN 284 A ALA 285 n 45 ALA 285 A LEU 286 n 46 LEU 286 A LYS 287 n 47 LYS 287 A ALA 288 n 48 SER 288 A ALA 289 n 49 PHE 289 A ALA 290 n 50 HIS 290 A ALA 291 n 51 LYS 291 A PRO 292 n 52 PRO 292 A ALA 293 n 53 VAL 293 A ALA 294 n 54 THR 294 A SER 295 n 55 SER 295 A TYR 296 n 56 TYR 296 A ALA 297 n 57 GLN 297 A GLU 298 n 58 GLU 298 A ALA 299 n 59 ALA 299 A CYS 300 n 60 CYS 300 A SER 301 n 61 SER 301 A ILE 302 n 62 ILE 302 A PRO 303 n 63 PRO 303 A GLY 304 n 64 GLY 304 A ILE 305 n 65 ILE 305 A GLY 306 n 66 GLY 306 A LYS 307 n 67 LYS 307 A ARG 308 n 68 ARG 308 A MET 309 n 69 MET 309 A ALA 310 n 70 ALA 310 A ALA 311 n 71 GLU 311 A LYS 312 n 72 LYS 312 A ILE 313 n 73 ILE 313 A ALA 314 n 74 ILE 314 A GLU 315 n 75 GLU 315 A ALA 316 n 76 ILE 316 A ALA 317 n 77 LEU 317 A ALA 318 n 78 GLU 318 A SER 319 n 79 SER 319 A GLY 320 n 80 GLY 320 A ALA 321 n 81 HIS 321 A ALA 322 n 82 LEU 322 A ALA 323 n 83 ARG 323 A ALA 324 n 84 LYS 324 A LEU 325 n 85 LEU 325 A ALA 326 n 86 ASP 326 A ALA 327 n 87 HIS 327 A ILE 328 n 88 ILE 328 A SER 329 n 89 SER 329 A GLU 330 n 90 GLU 330 A SER 331 n 91 SER 331 A VAL 332 n 92 VAL 332 A PRO 333 n 93 PRO 333 A VAL 334 n 94 VAL 334 A LEU 335 n 95 LEU 335 A GLU 336 n 96 GLU 336 A LEU 337 n 97 LEU 337 A PHE 338 n 98 PHE 338 A SER 339 n 99 SER 339 A ASN 340 n 100 ASN 340 A ILE 341 n 101 ILE 341 A TRP 342 n 102 TRP 342 A GLY 343 n 103 GLY 343 A ALA 344 n 104 ALA 344 A GLY 345 n 105 GLY 345 A THR 346 n 106 THR 346 A LYS 347 n 107 LYS 347 A THR 348 n 108 THR 348 A ALA 349 n 109 ALA 349 A GLN 350 n 110 GLN 350 A MET 351 n 111 MET 351 A TRP 352 n 112 TRP 352 A TYR 353 n 113 TYR 353 A GLN 354 n 114 GLN 354 A GLN 355 n 115 GLN 355 A GLY 356 n 116 GLY 356 A PHE 357 n 117 PHE 357 A ARG 358 n 118 ARG 358 A SER 359 n 119 SER 359 A LEU 360 n 120 LEU 360 A GLU 361 n 121 GLU 361 A ASP 362 n 122 ASP 362 A ILE 363 n 123 ILE 363 A ARG 364 n 124 ARG 364 A SER 365 n 125 SER 365 A GLN 366 n 126 GLN 366 A ALA 367 n 127 ALA 367 A SER 368 n 128 SER 368 A LEU 369 n 129 LEU 369 A THR 370 n 130 THR 370 A THR 371 n 131 THR 371 A GLN 372 n 132 GLN 372 A GLN 373 n 133 GLN 373 A ALA 374 n 134 ALA 374 A ILE 375 n 135 ILE 375 A GLY 376 n 136 GLY 376 A LEU 377 n 137 LEU 377 A LYS 378 n 138 LYS 378 A HIS 379 n 139 HIS 379 A TYR 380 n 140 TYR 380 A SER 381 n 141 SER 381 A ASP 382 n 142 ASP 382 A PHE 383 n 143 PHE 383 A LEU 384 n 144 LEU 384 A GLU 385 n 145 GLU 385 A ARG 386 n 146 ARG 386 A MET 387 n 147 MET 387 A PRO 388 n 148 PRO 388 A ARG 389 n 149 ARG 389 A ALA 390 n 150 GLU 390 A GLU 391 n 151 GLU 391 A ALA 392 n 152 ALA 392 A THR 393 n 153 THR 393 A GLU 394 n 154 GLU 394 A ILE 395 n 155 ILE 395 A GLU 396 n 156 GLU 396 A GLN 397 n 157 GLN 397 A THR 398 n 158 THR 398 A VAL 399 n 159 VAL 399 A GLN 400 n 160 GLN 400 A LYS 401 n 161 LYS 401 A ALA 402 n 162 ALA 402 A ALA 403 n 163 ALA 403 A GLN 404 n 164 GLN 404 A ALA 405 n 165 ALA 405 A PHE 406 n 166 PHE 406 A ASN 407 n 167 ASN 407 A SER 408 n 168 SER 408 A GLY 409 n 169 GLY 409 A LEU 410 n 170 LEU 410 A LEU 411 n 171 LEU 411 A CYS 412 n 172 CYS 412 A VAL 413 n 173 VAL 413 A ALA 414 n 174 ALA 414 A CYS 415 n 175 CYS 415 A GLY 416 n 176 GLY 416 A SER 417 n 177 SER 417 A TYR 418 n 178 TYR 418 A ARG 419 n 179 ARG 419 A ARG 420 n 180 ARG 420 A GLY 421 n 181 GLY 421 A LYS 422 n 182 LYS 422 A ALA 423 n 183 ALA 423 A THR 424 n 184 THR 424 A CYS 425 n 185 CYS 425 A GLY 426 n 186 GLY 426 A ASP 427 n 187 ASP 427 A VAL 428 n 188 VAL 428 A ASP 429 n 189 ASP 429 A VAL 430 n 190 VAL 430 A LEU 431 n 191 LEU 431 A ILE 432 n 192 ILE 432 A THR 433 n 193 THR 433 A HIS 434 n 194 HIS 434 A PRO 435 n 195 PRO 435 A ASP 436 n 196 ASP 436 A GLY 437 n 197 GLY 437 A ALA 438 n 198 ARG 438 A ALA 439 n 199 SER 439 A HIS 440 n 200 HIS 440 A ALA 441 n 201 ARG 441 A GLY 442 n 202 GLY 442 A ILE 443 n 203 ILE 443 A PHE 444 n 204 PHE 444 A SER 445 n 205 SER 445 A ALA 446 n 206 ARG 446 A LEU 447 n 207 LEU 447 A LEU 448 n 208 LEU 448 A ALA 449 n 209 ASP 449 A SER 450 n 210 SER 450 A LEU 451 n 211 LEU 451 A ARG 452 n 212 ARG 452 A ALA 453 n 213 GLN 453 A GLU 454 n 214 GLU 454 A GLY 455 n 215 GLY 455 A PHE 456 n 216 PHE 456 A LEU 457 n 217 LEU 457 A THR 458 n 218 THR 458 A ASP 459 n 219 ASP 459 A ASP 460 n 220 ASP 460 A LEU 461 n 221 LEU 461 A VAL 462 n 222 VAL 462 A SER 463 n 223 SER 463 A GLN 464 n 224 GLN 464 A GLU 465 n 225 GLU 465 A GLU 466 n 226 GLU 466 A ASN 467 n 227 ASN 467 A GLY 468 n 228 GLY 468 A ALA 469 n 229 GLN 469 A GLN 470 n 230 GLN 470 A GLN 471 n 231 GLN 471 A LYS 472 n 232 LYS 472 A TYR 473 n 233 TYR 473 A LEU 474 n 234 LEU 474 A GLY 475 n 235 GLY 475 A VAL 476 n 236 VAL 476 A CYS 477 n 237 CYS 477 A ARG 478 n 238 ARG 478 A LEU 479 n 239 LEU 479 A PRO 480 n 240 PRO 480 A GLY 481 n 241 GLY 481 A PRO 482 n 242 PRO 482 A GLY 483 n 243 GLY 483 A ARG 484 n 244 ARG 484 A ARG 485 n 245 ARG 485 A HIS 486 n 246 HIS 486 A ARG 487 n 247 ARG 487 A ARG 488 n 248 ARG 488 A LEU 489 n 249 LEU 489 A ASP 490 n 250 ASP 490 A ILE 491 n 251 ILE 491 A ILE 492 n 252 ILE 492 A VAL 493 n 253 VAL 493 A VAL 494 n 254 VAL 494 A PRO 495 n 255 PRO 495 A TYR 496 n 256 TYR 496 A SER 497 n 257 SER 497 A GLU 498 n 258 GLU 498 A PHE 499 n 259 PHE 499 A ALA 500 n 260 ALA 500 A CYS 501 n 261 CYS 501 A ALA 502 n 262 ALA 502 A LEU 503 n 263 LEU 503 A LEU 504 n 264 LEU 504 A TYR 505 n 265 TYR 505 A PHE 506 n 266 PHE 506 A THR 507 n 267 THR 507 A GLY 508 n 268 GLY 508 A SER 509 n 269 SER 509 A ALA 510 n 270 ALA 510 A HIS 511 n 271 HIS 511 A PHE 512 n 272 PHE 512 A ASN 513 n 273 ASN 513 A ARG 514 n 274 ARG 514 A SER 515 n 275 SER 515 A MET 516 n 276 MET 516 A ARG 517 n 277 ARG 517 A ALA 518 n 278 ALA 518 A LEU 519 n 279 LEU 519 A ALA 520 n 280 ALA 520 A LYS 521 n 281 LYS 521 A THR 522 n 282 THR 522 A LYS 523 n 283 LYS 523 A GLY 524 n 284 GLY 524 A MET 525 n 285 MET 525 A SER 526 n 286 SER 526 A LEU 527 n 287 LEU 527 A SER 528 n 288 SER 528 A GLU 529 n 289 GLU 529 A HIS 530 n 290 HIS 530 A ALA 531 n 291 ALA 531 A LEU 532 n 292 LEU 532 A SER 533 n 293 SER 533 A THR 534 n 294 THR 534 A ALA 535 n 295 ALA 535 A VAL 536 n 296 VAL 536 A VAL 537 n 297 VAL 537 A ARG 538 n 298 ARG 538 A ASN 539 n 299 ASN 539 A THR 540 n 300 THR 540 A ALA 541 n 301 HIS 541 A GLY 542 n 302 GLY 542 A ALA 543 n 303 ALA 543 A LYS 544 n 304 LYS 544 A ALA 545 n 305 VAL 545 A GLY 546 n 306 GLY 546 A PRO 547 n 307 PRO 547 A GLY 548 n 308 GLY 548 A ARG 549 n 309 ARG 549 A VAL 550 n 310 VAL 550 A LEU 551 n 311 LEU 551 A PRO 552 n 312 PRO 552 A THR 553 n 313 THR 553 A PRO 554 n 314 PRO 554 A THR 555 n 315 THR 555 A GLU 556 n 316 GLU 556 A LYS 557 n 317 LYS 557 A ASP 558 n 318 ASP 558 A VAL 559 n 319 VAL 559 A PHE 560 n 320 PHE 560 A ARG 561 n 321 ARG 561 A LEU 562 n 322 LEU 562 A LEU 563 n 323 LEU 563 A GLY 564 n 324 GLY 564 A LEU 565 n 325 LEU 565 A PRO 566 n 326 PRO 566 A TYR 567 n 327 TYR 567 A ARG 568 n 328 ARG 568 A ALA 569 n 329 GLU 569 A PRO 570 n 330 PRO 570 A ALA 571 n 331 ALA 571 A GLU 572 n 332 GLU 572 A ARG 573 n 333 ARG 573 A ASP 574 n 334 ASP 574 A TRP 575 n 335 TRP 575 A DC 1 n 1 DC 1 T DG 2 n 2 DG 2 T DG 3 n 3 DG 3 T DC 4 n 4 DC 4 T DA 5 n 5 DA 5 T DA 6 n 6 DA 6 T DA 7 n 7 DA 7 T DT 8 n 8 DT 8 T DA 9 n 9 DA 9 T DC 10 n 10 DC 10 T DT 11 n 11 DT 11 T DG 12 n 12 DG 12 T DC 1 n 1 DC 1 P DA 2 n 2 DA 2 P DG 3 n 3 DG 3 P DT 4 n 4 DT 4 P DA 5 n 5 DA 5 P 2DT 6 n 6 2DT 6 P DG 1 n 1 DG 1 D DC 2 n 2 DC 2 D DC 3 n 3 DC 3 D DG 4 n 4 DG 4 D author_and_software_defined_assembly PISA 4 tetrameric 6260 -32 16960 A HOH 121 I O HOH 1_555 A MG 168 F MG MG 1_555 A ASP 427 A OD2 ASP 187 1_555 88.2 A HOH 121 I O HOH 1_555 A MG 168 F MG MG 1_555 A ASP 429 A OD2 ASP 189 1_555 90.7 A ASP 427 A OD2 ASP 187 1_555 A MG 168 F MG MG 1_555 A ASP 429 A OD2 ASP 189 1_555 93.5 A HOH 121 I O HOH 1_555 A MG 168 F MG MG 1_555 A D3T 576 E O1A D3T 1_555 173.6 A ASP 427 A OD2 ASP 187 1_555 A MG 168 F MG MG 1_555 A D3T 576 E O1A D3T 1_555 97.6 A ASP 429 A OD2 ASP 189 1_555 A MG 168 F MG MG 1_555 A D3T 576 E O1A D3T 1_555 91.4 A HOH 121 I O HOH 1_555 A MG 168 F MG MG 1_555 A D3T 576 E O1B D3T 1_555 88.3 A ASP 427 A OD2 ASP 187 1_555 A MG 168 F MG MG 1_555 A D3T 576 E O1B D3T 1_555 170.6 A ASP 429 A OD2 ASP 189 1_555 A MG 168 F MG MG 1_555 A D3T 576 E O1B D3T 1_555 95.3 A D3T 576 E O1A D3T 1_555 A MG 168 F MG MG 1_555 A D3T 576 E O1B D3T 1_555 85.6 A HOH 121 I O HOH 1_555 A MG 168 F MG MG 1_555 A D3T 576 E O3G D3T 1_555 92.4 A ASP 427 A OD2 ASP 187 1_555 A MG 168 F MG MG 1_555 A D3T 576 E O3G D3T 1_555 89.7 A ASP 429 A OD2 ASP 189 1_555 A MG 168 F MG MG 1_555 A D3T 576 E O3G D3T 1_555 175.6 A D3T 576 E O1A D3T 1_555 A MG 168 F MG MG 1_555 A D3T 576 E O3G D3T 1_555 85.1 A D3T 576 E O1B D3T 1_555 A MG 168 F MG MG 1_555 A D3T 576 E O3G D3T 1_555 81.7 A HOH 132 I O HOH 1_555 A NA 169 G NA NA 1_555 A SER 339 A A O SER 99 1_555 91.8 A HOH 132 I O HOH 1_555 A NA 169 G NA NA 1_555 A SER 339 B A O SER 99 1_555 88.2 A SER 339 A A O SER 99 1_555 A NA 169 G NA NA 1_555 A SER 339 B A O SER 99 1_555 5.1 A HOH 132 I O HOH 1_555 A NA 169 G NA NA 1_555 A ILE 341 A O ILE 101 1_555 88.5 A SER 339 A A O SER 99 1_555 A NA 169 G NA NA 1_555 A ILE 341 A O ILE 101 1_555 95.1 A SER 339 B A O SER 99 1_555 A NA 169 G NA NA 1_555 A ILE 341 A O ILE 101 1_555 98.7 A HOH 132 I O HOH 1_555 A NA 169 G NA NA 1_555 A ALA 344 A O ALA 104 1_555 172.5 A SER 339 A A O SER 99 1_555 A NA 169 G NA NA 1_555 A ALA 344 A O ALA 104 1_555 84.7 A SER 339 B A O SER 99 1_555 A NA 169 G NA NA 1_555 A ALA 344 A O ALA 104 1_555 88.7 A ILE 341 A O ILE 101 1_555 A NA 169 G NA NA 1_555 A ALA 344 A O ALA 104 1_555 85.2 A HOH 132 I O HOH 1_555 A NA 169 G NA NA 1_555 P DA 5 C OP1 DA 5 1_555 91.7 A SER 339 A A O SER 99 1_555 A NA 169 G NA NA 1_555 P DA 5 C OP1 DA 5 1_555 164.4 A SER 339 B A O SER 99 1_555 A NA 169 G NA NA 1_555 P DA 5 C OP1 DA 5 1_555 161.1 A ILE 341 A O ILE 101 1_555 A NA 169 G NA NA 1_555 P DA 5 C OP1 DA 5 1_555 100.2 A ALA 344 A O ALA 104 1_555 A NA 169 G NA NA 1_555 P DA 5 C OP1 DA 5 1_555 93.4 A HOH 132 I O HOH 1_555 A NA 169 G NA NA 1_555 P HOH 12 K O HOH 1_555 90.0 A SER 339 A A O SER 99 1_555 A NA 169 G NA NA 1_555 P HOH 12 K O HOH 1_555 81.2 A SER 339 B A O SER 99 1_555 A NA 169 G NA NA 1_555 P HOH 12 K O HOH 1_555 77.5 A ILE 341 A O ILE 101 1_555 A NA 169 G NA NA 1_555 P HOH 12 K O HOH 1_555 175.9 A ALA 344 A O ALA 104 1_555 A NA 169 G NA NA 1_555 P HOH 12 K O HOH 1_555 95.9 P DA 5 C OP1 DA 5 1_555 A NA 169 G NA NA 1_555 P HOH 12 K O HOH 1_555 83.6 P 2DT 6 3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE C 2DT 6 DT 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N MET 387 A N MET 147 A O CYS 425 A O CYS 185 A N LEU 411 A N LEU 171 A O THR 433 A O THR 193 A N ILE 432 A N ILE 192 A O ILE 492 A O ILE 252 A O ARG 487 A O ARG 247 A N CYS 477 A N CYS 237 A O LEU 474 A O LEU 234 A N VAL 462 A N VAL 222 A N SER 526 A N SER 286 A O SER 533 A O SER 293 A N THR 534 A N THR 294 A O ARG 549 A O ARG 309 A N VAL 537 A N VAL 297 A O VAL 545 A O VAL 305 1 A CG GLU 258 A CG GLU 18 1 Y 1 A CD GLU 258 A CD GLU 18 1 Y 1 A OE1 GLU 258 A OE1 GLU 18 1 Y 1 A OE2 GLU 258 A OE2 GLU 18 1 Y 1 A CG LYS 259 A CG LYS 19 1 Y 1 A CD LYS 259 A CD LYS 19 1 Y 1 A CE LYS 259 A CE LYS 19 1 Y 1 A NZ LYS 259 A NZ LYS 19 1 Y 1 A CG ASN 284 A CG ASN 44 1 Y 1 A OD1 ASN 284 A OD1 ASN 44 1 Y 1 A ND2 ASN 284 A ND2 ASN 44 1 Y 1 A OG SER 288 A OG SER 48 1 Y 1 A CG PHE 289 A CG PHE 49 1 Y 1 A CD1 PHE 289 A CD1 PHE 49 1 Y 1 A CD2 PHE 289 A CD2 PHE 49 1 Y 1 A CE1 PHE 289 A CE1 PHE 49 1 Y 1 A CE2 PHE 289 A CE2 PHE 49 1 Y 1 A CZ PHE 289 A CZ PHE 49 1 Y 1 A CG HIS 290 A CG HIS 50 1 Y 1 A ND1 HIS 290 A ND1 HIS 50 1 Y 1 A CD2 HIS 290 A CD2 HIS 50 1 Y 1 A CE1 HIS 290 A CE1 HIS 50 1 Y 1 A NE2 HIS 290 A NE2 HIS 50 1 Y 1 A CG LYS 291 A CG LYS 51 1 Y 1 A CD LYS 291 A CD LYS 51 1 Y 1 A CE LYS 291 A CE LYS 51 1 Y 1 A NZ LYS 291 A NZ LYS 51 1 Y 1 A CG1 VAL 293 A CG1 VAL 53 1 Y 1 A CG2 VAL 293 A CG2 VAL 53 1 Y 1 A OG1 THR 294 A OG1 THR 54 1 Y 1 A CG2 THR 294 A CG2 THR 54 1 Y 1 A CG GLN 297 A CG GLN 57 1 Y 1 A CD GLN 297 A CD GLN 57 1 Y 1 A OE1 GLN 297 A OE1 GLN 57 1 Y 1 A NE2 GLN 297 A NE2 GLN 57 1 Y 1 A CG GLU 311 A CG GLU 71 1 Y 1 A CD GLU 311 A CD GLU 71 1 Y 1 A OE1 GLU 311 A OE1 GLU 71 1 Y 1 A OE2 GLU 311 A OE2 GLU 71 1 Y 1 A CG1 ILE 314 A CG1 ILE 74 1 Y 1 A CG2 ILE 314 A CG2 ILE 74 1 Y 1 A CD1 ILE 314 A CD1 ILE 74 1 Y 1 A CG1 ILE 316 A CG1 ILE 76 1 Y 1 A CG2 ILE 316 A CG2 ILE 76 1 Y 1 A CD1 ILE 316 A CD1 ILE 76 1 Y 1 A CG LEU 317 A CG LEU 77 1 Y 1 A CD1 LEU 317 A CD1 LEU 77 1 Y 1 A CD2 LEU 317 A CD2 LEU 77 1 Y 1 A CG GLU 318 A CG GLU 78 1 Y 1 A CD GLU 318 A CD GLU 78 1 Y 1 A OE1 GLU 318 A OE1 GLU 78 1 Y 1 A OE2 GLU 318 A OE2 GLU 78 1 Y 1 A CG HIS 321 A CG HIS 81 1 Y 1 A ND1 HIS 321 A ND1 HIS 81 1 Y 1 A CD2 HIS 321 A CD2 HIS 81 1 Y 1 A CE1 HIS 321 A CE1 HIS 81 1 Y 1 A NE2 HIS 321 A NE2 HIS 81 1 Y 1 A CG LEU 322 A CG LEU 82 1 Y 1 A CD1 LEU 322 A CD1 LEU 82 1 Y 1 A CD2 LEU 322 A CD2 LEU 82 1 Y 1 A CG ARG 323 A CG ARG 83 1 Y 1 A CD ARG 323 A CD ARG 83 1 Y 1 A NE ARG 323 A NE ARG 83 1 Y 1 A CZ ARG 323 A CZ ARG 83 1 Y 1 A NH1 ARG 323 A NH1 ARG 83 1 Y 1 A NH2 ARG 323 A NH2 ARG 83 1 Y 1 A CG LYS 324 A CG LYS 84 1 Y 1 A CD LYS 324 A CD LYS 84 1 Y 1 A CE LYS 324 A CE LYS 84 1 Y 1 A NZ LYS 324 A NZ LYS 84 1 Y 1 A CG ASP 326 A CG ASP 86 1 Y 1 A OD1 ASP 326 A OD1 ASP 86 1 Y 1 A OD2 ASP 326 A OD2 ASP 86 1 Y 1 A CG HIS 327 A CG HIS 87 1 Y 1 A ND1 HIS 327 A ND1 HIS 87 1 Y 1 A CD2 HIS 327 A CD2 HIS 87 1 Y 1 A CE1 HIS 327 A CE1 HIS 87 1 Y 1 A NE2 HIS 327 A NE2 HIS 87 1 Y 1 A CG GLU 390 A CG GLU 150 1 Y 1 A CD GLU 390 A CD GLU 150 1 Y 1 A OE1 GLU 390 A OE1 GLU 150 1 Y 1 A OE2 GLU 390 A OE2 GLU 150 1 Y 1 A CD GLN 397 A CD GLN 157 1 Y 1 A OE1 GLN 397 A OE1 GLN 157 1 Y 1 A NE2 GLN 397 A NE2 GLN 157 1 Y 1 A CG ARG 438 A CG ARG 198 1 Y 1 A CD ARG 438 A CD ARG 198 1 Y 1 A NE ARG 438 A NE ARG 198 1 Y 1 A CZ ARG 438 A CZ ARG 198 1 Y 1 A NH1 ARG 438 A NH1 ARG 198 1 Y 1 A NH2 ARG 438 A NH2 ARG 198 1 Y 1 A OG SER 439 A OG SER 199 1 Y 1 A CG ARG 441 A CG ARG 201 1 Y 1 A CD ARG 441 A CD ARG 201 1 Y 1 A NE ARG 441 A NE ARG 201 1 Y 1 A CZ ARG 441 A CZ ARG 201 1 Y 1 A NH1 ARG 441 A NH1 ARG 201 1 Y 1 A NH2 ARG 441 A NH2 ARG 201 1 Y 1 A CG ARG 446 A CG ARG 206 1 Y 1 A CD ARG 446 A CD ARG 206 1 Y 1 A NE ARG 446 A NE ARG 206 1 Y 1 A CZ ARG 446 A CZ ARG 206 1 Y 1 A NH1 ARG 446 A NH1 ARG 206 1 Y 1 A NH2 ARG 446 A NH2 ARG 206 1 Y 1 A CG ASP 449 A CG ASP 209 1 Y 1 A OD1 ASP 449 A OD1 ASP 209 1 Y 1 A OD2 ASP 449 A OD2 ASP 209 1 Y 1 A CG GLN 453 A CG GLN 213 1 Y 1 A CD GLN 453 A CD GLN 213 1 Y 1 A OE1 GLN 453 A OE1 GLN 213 1 Y 1 A NE2 GLN 453 A NE2 GLN 213 1 Y 1 A CG GLN 469 A CG GLN 229 1 Y 1 A CD GLN 469 A CD GLN 229 1 Y 1 A OE1 GLN 469 A OE1 GLN 229 1 Y 1 A NE2 GLN 469 A NE2 GLN 229 1 Y 1 A CG HIS 541 A CG HIS 301 1 Y 1 A ND1 HIS 541 A ND1 HIS 301 1 Y 1 A CD2 HIS 541 A CD2 HIS 301 1 Y 1 A CE1 HIS 541 A CE1 HIS 301 1 Y 1 A NE2 HIS 541 A NE2 HIS 301 1 Y 1 A CG1 VAL 545 A CG1 VAL 305 1 Y 1 A CG2 VAL 545 A CG2 VAL 305 1 Y 1 A CG GLU 569 A CG GLU 329 1 Y 1 A CD GLU 569 A CD GLU 329 1 Y 1 A OE1 GLU 569 A OE1 GLU 329 1 Y 1 A OE2 GLU 569 A OE2 GLU 329 1 Y 1 A MET 241 A MET 1 1 Y 1 A ALA 242 A ALA 2 1 Y 1 A GLN 243 A GLN 3 1 Y 1 A PRO 244 A PRO 4 1 Y 1 A SER 245 A SER 5 1 Y 1 A SER 246 A SER 6 1 Y 1 A GLN 247 A GLN 7 1 Y 1 A LYS 248 A LYS 8 1 Y 1 A ALA 249 A ALA 9 1 Y 1 A THR 250 A THR 10 1 Y 1 A ASN 251 A ASN 11 1 Y 1 A HIS 252 A HIS 12 1 Y 1 A ASN 253 A ASN 13 1 Y 1 A LEU 254 A LEU 14 1 Y 1 A HIS 255 A HIS 15 1 Y 1 A ILE 256 A ILE 16 1 Y 1 T DT 8 0.060 SIDE CHAIN 1 D DG 1 0.070 SIDE CHAIN 1 A A C N ILE ARG 363 364 0.141 0.023 1.336 1.477 B Y 1 D D P OP3 DG DG 1 1 -0.088 0.012 1.607 1.519 N 1 A HIS 290 -47.36 -16.29 1 A GLU 318 -107.56 -74.10 1 A ASN 407 -162.43 86.97 1 A CYS 415 -111.32 -140.42 1 A ARG 438 -151.69 -34.39 1 A SER 463 -161.69 92.48 CNS_TOPPAR:protein_rep.param CNS_TOPPAR:dna-rna_rep.param CNS_TOPPAR:water_rep.param T12tern3.par 85.70 42.678 23.13 -7.900 0.000 0.000 13.124 0.000 -5.225 0.261 0.228 1.950 50.000 1823 36678 4.600 93.100 1.00 0.40 1 0.00 MOLECULAR REPLACEMENT PDB ENTRY 1XSN 72.350 1.950 50.000 351 3213 34 446 2382 1.205 1.500 1.732 2.000 1.931 2.000 2.432 2.500 1.950 50.000 3HWT 38019 0.089 1.066 1 10.283 4.100 96.000 0.399 1.95 2.02 3545 1.187 1 2.80 91.20 0.296 2.02 2.10 3793 1.128 1 3.00 98.00 0.207 2.10 2.20 3884 1.068 1 3.20 99.20 0.154 2.20 2.31 3904 1.024 1 3.40 99.80 0.126 2.31 2.46 3918 1.052 1 3.60 99.80 0.109 2.46 2.65 3913 1.039 1 3.90 99.60 0.120 2.65 2.91 3910 1.091 1 4.50 99.20 0.101 2.91 3.33 3856 1.069 1 4.80 96.90 0.090 3.33 4.20 3667 0.997 1 5.20 91.20 0.070 4.20 50.00 3629 1.075 1 6.60 85.80 data reduction Zbyszek Otwinowski hkl@hkl-xray.com http://www.hkl-xray.com/ DENZO package data scaling Zbyszek Otwinowski hkl@hkl-xray.com http://www.hkl-xray.com/ SCALEPACK package phasing Alexei Vaguine alexei@ysbl.york.ac.uk Fortran_77 http://www.ccp4.ac.uk/dist/html/molrep.html MOLREP program refinement Axel T. Brunger axel.brunger@yale.edu Fortran_77 http://cns-online.org/ CNS package data extraction PDB help@deposit.rcsb.org June 11, 2008 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.005 data collection HKL-2000 Ternary complex of DNA polymerase lambda bound to a two nucleotide gapped DNA substrate with a scrunched dA 1 N N 2 N N 3 N N 4 N N 5 N N 6 N N 7 N N 8 N N 9 N N 9 N N 9 N N 9 N N A THR 257 A THR 17 HELX_P A GLY 271 A GLY 31 1 1 15 A ASP 272 A ASP 32 HELX_P A LYS 287 A LYS 47 1 2 16 A SER 295 A SER 55 HELX_P A ILE 302 A ILE 62 1 3 8 A GLY 306 A GLY 66 HELX_P A GLY 320 A GLY 80 1 4 15 A LEU 322 A LEU 82 HELX_P A ILE 328 A ILE 88 5 5 7 A SER 331 A SER 91 HELX_P A ASN 340 A ASN 100 1 6 10 A GLY 345 A GLY 105 HELX_P A GLN 355 A GLN 115 1 7 11 A SER 359 A SER 119 HELX_P A ALA 367 A ALA 127 1 8 9 A THR 370 A THR 130 HELX_P A HIS 379 A HIS 139 1 9 10 A SER 381 A SER 141 HELX_P A GLU 385 A GLU 145 5 10 5 A ARG 389 A ARG 149 HELX_P A ASN 407 A ASN 167 1 11 19 A CYS 415 A CYS 175 HELX_P A ARG 420 A ARG 180 1 12 6 A ILE 443 A ILE 203 HELX_P A GLU 454 A GLU 214 1 13 12 A PRO 495 A PRO 255 HELX_P A SER 497 A SER 257 5 14 3 A GLU 498 A GLU 258 HELX_P A GLY 508 A GLY 268 1 15 11 A SER 509 A SER 269 HELX_P A LYS 523 A LYS 283 1 16 15 A THR 555 A THR 315 HELX_P A LEU 563 A LEU 323 1 17 9 A GLU 569 A GLU 329 HELX_P A ASP 574 A ASP 334 5 18 6 covale 1.611 both P DA 5 C O3' DA 5 1_555 P 2DT 6 C P 2DT 6 1_555 metalc 2.137 A HOH 121 I O HOH 1_555 A MG 168 F MG MG 1_555 metalc 2.466 A HOH 132 I O HOH 1_555 A NA 169 G NA NA 1_555 metalc 1.966 A MG 168 F MG MG 1_555 A ASP 427 A OD2 ASP 187 1_555 metalc 2.155 A MG 168 F MG MG 1_555 A ASP 429 A OD2 ASP 189 1_555 metalc 2.019 A MG 168 F MG MG 1_555 A D3T 576 E O1A D3T 1_555 metalc 1.920 A MG 168 F MG MG 1_555 A D3T 576 E O1B D3T 1_555 metalc 2.180 A MG 168 F MG MG 1_555 A D3T 576 E O3G D3T 1_555 metalc 2.366 A A NA 169 G NA NA 1_555 A SER 339 A O SER 99 1_555 metalc 2.365 B A NA 169 G NA NA 1_555 A SER 339 A O SER 99 1_555 metalc 2.554 A NA 169 G NA NA 1_555 A ILE 341 A O ILE 101 1_555 metalc 2.345 A NA 169 G NA NA 1_555 A ALA 344 A O ALA 104 1_555 metalc 2.541 A NA 169 G NA NA 1_555 P DA 5 C OP1 DA 5 1_555 metalc 2.468 A NA 169 G NA NA 1_555 P HOH 12 K O HOH 1_555 hydrog WATSON-CRICK T DC 1 B N3 DC 1 1_555 D DG 4 D N1 DG 4 1_555 hydrog WATSON-CRICK T DC 1 B N4 DC 1 1_555 D DG 4 D O6 DG 4 1_555 hydrog WATSON-CRICK T DC 1 B O2 DC 1 1_555 D DG 4 D N2 DG 4 1_555 hydrog WATSON-CRICK T DG 2 B N1 DG 2 1_555 D DC 3 D N3 DC 3 1_555 hydrog WATSON-CRICK T DG 2 B N2 DG 2 1_555 D DC 3 D O2 DC 3 1_555 hydrog WATSON-CRICK T DG 2 B O6 DG 2 1_555 D DC 3 D N4 DC 3 1_555 hydrog WATSON-CRICK T DG 3 B N1 DG 3 1_555 D DC 2 D N3 DC 2 1_555 hydrog WATSON-CRICK T DG 3 B N2 DG 3 1_555 D DC 2 D O2 DC 2 1_555 hydrog WATSON-CRICK T DG 3 B O6 DG 3 1_555 D DC 2 D N4 DC 2 1_555 hydrog WATSON-CRICK T DC 4 B N3 DC 4 1_555 D DG 1 D N1 DG 1 1_555 hydrog WATSON-CRICK T DC 4 B N4 DC 4 1_555 D DG 1 D O6 DG 1 1_555 hydrog WATSON-CRICK T DC 4 B O2 DC 4 1_555 D DG 1 D N2 DG 1 1_555 hydrog WATSON-CRICK T DA 7 B N1 DA 7 1_555 P 2DT 6 C N3 2DT 6 1_555 hydrog WATSON-CRICK T DA 7 B N6 DA 7 1_555 P 2DT 6 C O4 2DT 6 1_555 hydrog WATSON-CRICK T DT 8 B N3 DT 8 1_555 P DA 5 C N1 DA 5 1_555 hydrog WATSON-CRICK T DT 8 B O4 DT 8 1_555 P DA 5 C N6 DA 5 1_555 hydrog WATSON-CRICK T DA 9 B N1 DA 9 1_555 P DT 4 C N3 DT 4 1_555 hydrog WATSON-CRICK T DA 9 B N6 DA 9 1_555 P DT 4 C O4 DT 4 1_555 hydrog WATSON-CRICK T DC 10 B N3 DC 10 1_555 P DG 3 C N1 DG 3 1_555 hydrog WATSON-CRICK T DC 10 B N4 DC 10 1_555 P DG 3 C O6 DG 3 1_555 hydrog WATSON-CRICK T DC 10 B O2 DC 10 1_555 P DG 3 C N2 DG 3 1_555 hydrog WATSON-CRICK T DT 11 B N3 DT 11 1_555 P DA 2 C N1 DA 2 1_555 hydrog WATSON-CRICK T DT 11 B O4 DT 11 1_555 P DA 2 C N6 DA 2 1_555 hydrog WATSON-CRICK T DG 12 B N1 DG 12 1_555 P DC 1 C N3 DC 1 1_555 hydrog WATSON-CRICK T DG 12 B N2 DG 12 1_555 P DC 1 C O2 DC 1 1_555 hydrog WATSON-CRICK T DG 12 B O6 DG 12 1_555 P DC 1 C N4 DC 1 1_555 TRANSFERASE/DNA helix-hairpin-helix, DNA damage, DNA repair, DNA replication, DNA synthesis, DNA-binding, DNA-directed DNA polymerase, Lyase, Manganese, Metal-binding, Nucleotidyltransferase, Nucleus, Phosphoprotein, Transferase, TRANSFERASE-DNA COMPLEX A GLY 508 A GLY 268 1 A SER 509 A SER 269 1.13 DPOLL_HUMAN UNP 1 242 Q9UGP5 AQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGH LRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQK AAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPG PGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFR LLGLPYREPAERDW 3HWT PDB 2 1 3HWT CGGCAAATACTG 3HWT PDB 3 1 3HWT CAGTAT 3HWT PDB 4 1 3HWT GCCG 242 575 3HWT 242 575 Q9UGP5 A 1 2 335 1 12 3HWT 1 12 3HWT T 2 1 12 1 6 3HWT 1 6 3HWT P 3 1 6 1 4 3HWT 1 4 3HWT D 4 1 4 1 expression tag MET 241 3HWT A Q9UGP5 UNP 1 1 CYS engineered mutation ALA 543 3HWT A Q9UGP5 UNP 543 303 2 5 3 2 anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A MET 387 A MET 147 A PRO 388 A PRO 148 A THR 424 A THR 184 A CYS 425 A CYS 185 A LEU 411 A LEU 171 A ALA 414 A ALA 174 A ASP 427 A ASP 187 A THR 433 A THR 193 A ARG 487 A ARG 247 A VAL 493 A VAL 253 A LYS 472 A LYS 232 A CYS 477 A CYS 237 A LEU 457 A LEU 217 A VAL 462 A VAL 222 A SER 526 A SER 286 A LEU 527 A LEU 287 A LEU 532 A LEU 292 A THR 534 A THR 294 A ARG 549 A ARG 309 A VAL 550 A VAL 310 A VAL 537 A VAL 297 A ARG 538 A ARG 298 A LYS 544 A LYS 304 A GLY 546 A GLY 306 BINDING SITE FOR RESIDUE D3T A 576 A D3T 576 Software 22 BINDING SITE FOR RESIDUE MG A 168 A MG 168 Software 4 BINDING SITE FOR RESIDUE NA A 169 A NA 169 Software 6 BINDING SITE FOR RESIDUE EDO A 2801 A EDO 2801 Software 6 A HOH 5 I HOH 22 1_555 A HOH 26 I HOH 22 1_555 A HOH 47 I HOH 22 1_555 A HOH 121 I HOH 22 1_555 A MG 168 F MG 22 1_555 A HOH 222 I HOH 22 1_555 A HOH 228 I HOH 22 1_555 A ARG 386 A ARG 146 22 1_555 A GLY 416 A GLY 176 22 1_555 A SER 417 A SER 177 22 1_555 A ARG 420 A ARG 180 22 1_555 A GLY 426 A GLY 186 22 1_555 A ASP 427 A ASP 187 22 1_555 A ASP 429 A ASP 189 22 1_555 A TYR 505 A TYR 265 22 1_555 A PHE 506 A PHE 266 22 1_555 A GLY 508 A GLY 268 22 1_555 A ALA 510 A ALA 270 22 1_555 A ASN 513 A ASN 273 22 1_555 A HOH 585 I HOH 22 1_555 P 2DT 6 C 2DT 6 22 1_555 T DA 6 B DA 6 22 1_555 A HOH 121 I HOH 4 1_555 A ASP 427 A ASP 187 4 1_555 A ASP 429 A ASP 189 4 1_555 A D3T 576 E D3T 4 1_555 A HOH 132 I HOH 6 1_555 A SER 339 A SER 99 6 1_555 A ILE 341 A ILE 101 6 1_555 A ALA 344 A ALA 104 6 1_555 P DA 5 C DA 5 6 1_555 P HOH 12 K HOH 6 1_555 A HOH 150 I HOH 6 1_555 A THR 348 A THR 108 6 4_555 A MET 351 A MET 111 6 4_555 A ARG 485 A ARG 245 6 1_555 A HOH 604 I HOH 6 1_555 P DG 3 C DG 3 6 4_555 19 P 21 21 21