0.028738 0.000000 0.000000 0.000000 0.016404 0.000000 0.000000 0.000000 0.013038 0.000000 0.000000 0.000000 Joint Center for Structural Genomics (JCSG) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.000 90.000 90.000 34.797 60.962 76.701 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C6 H14 O2 118.174 (4R)-2-METHYLPENTANE-2,4-DIOL non-polymer C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking To be published 0353 Crystal structure of Putative signal transduction protein (YP_002936568.1) from Eubacterium rectale at 1.20 A resolution 100 1 Flat collimating mirror, toroid focusing mirror CCD 2009-05-13 MARMOSAIC 325 mm CCD Double crystal monochromator SINGLE WAVELENGTH M x-ray 1 0.97922 1.0 BL9-2 SSRL 0.97922 SYNCHROTRON SSRL BEAMLINE BL9-2 22084.646 Putative signal transduction protein 1 man polymer 118.174 (4R)-2-METHYLPENTANE-2,4-DIOL 1 syn non-polymer 18.015 water 301 nat water no yes G(MSE)SYQNANYSAFYVSEPFSESNLGANSTHDFVYYN(MSE)LR(MSE)WKGEDNSFPFNDAHDKTYNVRDGSDWEKT LKPRLHTRLDNSKNIILFLSSITANSRALREE(MSE)NYGIGTKGLPVIVIYPDYDKKSDIVDSNGNFKKQIKDLWDKLP AFRDN(MSE)SSVATLHIPCTKSVIISALNNEDF(MSE)VNT(MSE)ADAEKYYYKP GMSYQNANYSAFYVSEPFSESNLGANSTHDFVYYNMLRMWKGEDNSFPFNDAHDKTYNVRDGSDWEKTLKPRLHTRLDNS KNIILFLSSITANSRALREEMNYGIGTKGLPVIVIYPDYDKKSDIVDSNGNFKKQIKDLWDKLPAFRDNMSSVATLHIPC TKSVIISALNNEDFMVNTMADAEKYYYKP A 391897 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 33656 YP_002936568.1 515619 Eubacterium rectale ATCC 33656 562 Escherichia coli HK100 Plasmid SpeedET 1 1.84 33.22 VAPOR DIFFUSION, SITTING DROP 9.0 40.0000% MPD, 0.1M Bicine pH 9.0, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K 277 Joint Center for Structural Genomics JCSG PSI, Protein Structure Initiative pdbx_struct_assembly_auth_evidence software software struct_conn struct_ref_seq repository Initial release Version format compliance Author supporting evidence Refinement description Data collection Database references Derived calculations Refinement description 1 0 2009-07-21 1 1 2011-07-13 1 2 2017-10-25 1 3 2019-07-24 _software.classification _software.contact_author _software.contact_author_email _software.language _software.location _software.name _software.type _software.version _struct_conn.pdbx_leaving_atom_flag _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end Y RCSB Y RCSB 2009-06-22 REL REL MRD (4R)-2-METHYLPENTANE-2,4-DIOL HOH water THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. MRD 1 2 MRD MRD 189 A HOH 190 3 HOH HOH 190 A HOH 191 3 HOH HOH 191 A HOH 192 3 HOH HOH 192 A HOH 193 3 HOH HOH 193 A HOH 194 3 HOH HOH 194 A HOH 195 3 HOH HOH 195 A HOH 196 3 HOH HOH 196 A HOH 197 3 HOH HOH 197 A HOH 198 3 HOH HOH 198 A HOH 199 3 HOH HOH 199 A HOH 200 3 HOH HOH 200 A HOH 201 3 HOH HOH 201 A HOH 202 3 HOH HOH 202 A HOH 203 3 HOH HOH 203 A HOH 204 3 HOH HOH 204 A HOH 205 3 HOH HOH 205 A HOH 206 3 HOH HOH 206 A HOH 207 3 HOH HOH 207 A HOH 208 3 HOH HOH 208 A HOH 209 3 HOH HOH 209 A HOH 210 3 HOH HOH 210 A HOH 211 3 HOH HOH 211 A HOH 212 3 HOH HOH 212 A HOH 213 3 HOH HOH 213 A HOH 214 3 HOH HOH 214 A HOH 215 3 HOH HOH 215 A HOH 216 3 HOH HOH 216 A HOH 217 3 HOH HOH 217 A HOH 218 3 HOH HOH 218 A HOH 219 3 HOH HOH 219 A HOH 220 3 HOH HOH 220 A HOH 221 3 HOH HOH 221 A HOH 222 3 HOH HOH 222 A HOH 223 3 HOH HOH 223 A HOH 224 3 HOH HOH 224 A HOH 225 3 HOH HOH 225 A HOH 226 3 HOH HOH 226 A HOH 227 3 HOH HOH 227 A HOH 228 3 HOH HOH 228 A HOH 229 3 HOH HOH 229 A HOH 230 3 HOH HOH 230 A HOH 231 3 HOH HOH 231 A HOH 232 3 HOH HOH 232 A HOH 233 3 HOH HOH 233 A HOH 234 3 HOH HOH 234 A HOH 235 3 HOH HOH 235 A HOH 236 3 HOH HOH 236 A HOH 237 3 HOH HOH 237 A HOH 238 3 HOH HOH 238 A HOH 239 3 HOH HOH 239 A HOH 240 3 HOH HOH 240 A HOH 241 3 HOH HOH 241 A HOH 242 3 HOH HOH 242 A HOH 243 3 HOH HOH 243 A HOH 244 3 HOH HOH 244 A HOH 245 3 HOH HOH 245 A HOH 246 3 HOH HOH 246 A HOH 247 3 HOH HOH 247 A HOH 248 3 HOH HOH 248 A HOH 249 3 HOH HOH 249 A HOH 250 3 HOH HOH 250 A HOH 251 3 HOH HOH 251 A HOH 252 3 HOH HOH 252 A HOH 253 3 HOH HOH 253 A HOH 254 3 HOH HOH 254 A HOH 255 3 HOH HOH 255 A HOH 256 3 HOH HOH 256 A HOH 257 3 HOH HOH 257 A HOH 258 3 HOH HOH 258 A HOH 259 3 HOH HOH 259 A HOH 260 3 HOH HOH 260 A HOH 261 3 HOH HOH 261 A HOH 262 3 HOH HOH 262 A HOH 263 3 HOH HOH 263 A HOH 264 3 HOH HOH 264 A HOH 265 3 HOH HOH 265 A HOH 266 3 HOH HOH 266 A HOH 267 3 HOH HOH 267 A HOH 268 3 HOH HOH 268 A HOH 269 3 HOH HOH 269 A HOH 270 3 HOH HOH 270 A HOH 271 3 HOH HOH 271 A HOH 272 3 HOH HOH 272 A HOH 273 3 HOH HOH 273 A HOH 274 3 HOH HOH 274 A HOH 275 3 HOH HOH 275 A HOH 276 3 HOH HOH 276 A HOH 277 3 HOH HOH 277 A HOH 278 3 HOH HOH 278 A HOH 279 3 HOH HOH 279 A HOH 280 3 HOH HOH 280 A HOH 281 3 HOH HOH 281 A HOH 282 3 HOH HOH 282 A HOH 283 3 HOH HOH 283 A HOH 284 3 HOH HOH 284 A HOH 285 3 HOH HOH 285 A HOH 286 3 HOH HOH 286 A HOH 287 3 HOH HOH 287 A HOH 288 3 HOH HOH 288 A HOH 289 3 HOH HOH 289 A HOH 290 3 HOH HOH 290 A HOH 291 3 HOH HOH 291 A HOH 292 3 HOH HOH 292 A HOH 293 3 HOH HOH 293 A HOH 294 3 HOH HOH 294 A HOH 295 3 HOH HOH 295 A HOH 296 3 HOH HOH 296 A HOH 297 3 HOH HOH 297 A HOH 298 3 HOH HOH 298 A HOH 299 3 HOH HOH 299 A HOH 300 3 HOH HOH 300 A HOH 301 3 HOH HOH 301 A HOH 302 3 HOH HOH 302 A HOH 2 3 HOH HOH 303 A HOH 3 3 HOH HOH 304 A HOH 4 3 HOH HOH 305 A HOH 5 3 HOH HOH 306 A HOH 6 3 HOH HOH 307 A HOH 7 3 HOH HOH 308 A HOH 8 3 HOH HOH 309 A HOH 9 3 HOH HOH 310 A HOH 10 3 HOH HOH 311 A HOH 11 3 HOH HOH 312 A HOH 12 3 HOH HOH 313 A HOH 13 3 HOH HOH 314 A HOH 14 3 HOH HOH 315 A HOH 15 3 HOH HOH 316 A HOH 16 3 HOH HOH 317 A HOH 17 3 HOH HOH 318 A HOH 18 3 HOH HOH 319 A HOH 19 3 HOH HOH 320 A HOH 20 3 HOH HOH 321 A HOH 21 3 HOH HOH 322 A HOH 22 3 HOH HOH 323 A HOH 23 3 HOH HOH 324 A HOH 24 3 HOH HOH 325 A HOH 25 3 HOH HOH 326 A HOH 26 3 HOH HOH 327 A HOH 27 3 HOH HOH 328 A HOH 28 3 HOH HOH 329 A HOH 29 3 HOH HOH 330 A HOH 30 3 HOH HOH 331 A HOH 31 3 HOH HOH 332 A HOH 32 3 HOH HOH 333 A HOH 33 3 HOH HOH 334 A HOH 34 3 HOH HOH 335 A HOH 35 3 HOH HOH 336 A HOH 36 3 HOH HOH 337 A HOH 37 3 HOH HOH 338 A HOH 38 3 HOH HOH 339 A HOH 39 3 HOH HOH 340 A HOH 40 3 HOH HOH 341 A HOH 41 3 HOH HOH 342 A HOH 42 3 HOH HOH 343 A HOH 43 3 HOH HOH 344 A HOH 44 3 HOH HOH 345 A HOH 45 3 HOH HOH 346 A HOH 46 3 HOH HOH 347 A HOH 47 3 HOH HOH 348 A HOH 48 3 HOH HOH 349 A HOH 49 3 HOH HOH 350 A HOH 50 3 HOH HOH 351 A HOH 51 3 HOH HOH 352 A HOH 52 3 HOH HOH 353 A HOH 53 3 HOH HOH 354 A HOH 54 3 HOH HOH 355 A HOH 55 3 HOH HOH 356 A HOH 56 3 HOH HOH 357 A HOH 57 3 HOH HOH 358 A HOH 58 3 HOH HOH 359 A HOH 59 3 HOH HOH 360 A HOH 60 3 HOH HOH 361 A HOH 61 3 HOH HOH 362 A HOH 62 3 HOH HOH 363 A HOH 63 3 HOH HOH 364 A HOH 64 3 HOH HOH 365 A HOH 65 3 HOH HOH 366 A HOH 66 3 HOH HOH 367 A HOH 67 3 HOH HOH 368 A HOH 68 3 HOH HOH 369 A HOH 69 3 HOH HOH 370 A HOH 70 3 HOH HOH 371 A HOH 71 3 HOH HOH 372 A HOH 72 3 HOH HOH 373 A HOH 73 3 HOH HOH 374 A HOH 74 3 HOH HOH 375 A HOH 75 3 HOH HOH 376 A HOH 76 3 HOH HOH 377 A HOH 77 3 HOH HOH 378 A HOH 78 3 HOH HOH 379 A HOH 79 3 HOH HOH 380 A HOH 80 3 HOH HOH 381 A HOH 81 3 HOH HOH 382 A HOH 82 3 HOH HOH 383 A HOH 83 3 HOH HOH 384 A HOH 84 3 HOH HOH 385 A HOH 85 3 HOH HOH 386 A HOH 86 3 HOH HOH 387 A HOH 87 3 HOH HOH 388 A HOH 88 3 HOH HOH 389 A HOH 89 3 HOH HOH 390 A HOH 90 3 HOH HOH 391 A HOH 91 3 HOH HOH 392 A HOH 92 3 HOH HOH 393 A HOH 93 3 HOH HOH 394 A HOH 94 3 HOH HOH 395 A HOH 95 3 HOH HOH 396 A HOH 96 3 HOH HOH 397 A HOH 97 3 HOH HOH 398 A HOH 98 3 HOH HOH 399 A HOH 99 3 HOH HOH 400 A HOH 100 3 HOH HOH 401 A HOH 101 3 HOH HOH 402 A HOH 102 3 HOH HOH 403 A HOH 103 3 HOH HOH 404 A HOH 104 3 HOH HOH 405 A HOH 105 3 HOH HOH 406 A HOH 106 3 HOH HOH 407 A HOH 107 3 HOH HOH 408 A HOH 108 3 HOH HOH 409 A HOH 109 3 HOH HOH 410 A HOH 110 3 HOH HOH 411 A HOH 111 3 HOH HOH 412 A HOH 112 3 HOH HOH 413 A HOH 113 3 HOH HOH 414 A HOH 114 3 HOH HOH 415 A HOH 115 3 HOH HOH 416 A HOH 116 3 HOH HOH 417 A HOH 117 3 HOH HOH 418 A HOH 118 3 HOH HOH 419 A HOH 119 3 HOH HOH 420 A HOH 120 3 HOH HOH 421 A HOH 121 3 HOH HOH 422 A HOH 122 3 HOH HOH 423 A HOH 123 3 HOH HOH 424 A HOH 124 3 HOH HOH 425 A HOH 125 3 HOH HOH 426 A HOH 126 3 HOH HOH 427 A HOH 127 3 HOH HOH 428 A HOH 128 3 HOH HOH 429 A HOH 129 3 HOH HOH 430 A HOH 130 3 HOH HOH 431 A HOH 131 3 HOH HOH 432 A HOH 132 3 HOH HOH 433 A HOH 133 3 HOH HOH 434 A HOH 134 3 HOH HOH 435 A HOH 135 3 HOH HOH 436 A HOH 136 3 HOH HOH 437 A HOH 137 3 HOH HOH 438 A HOH 138 3 HOH HOH 439 A HOH 139 3 HOH HOH 440 A HOH 140 3 HOH HOH 441 A HOH 141 3 HOH HOH 442 A HOH 142 3 HOH HOH 443 A HOH 143 3 HOH HOH 444 A HOH 144 3 HOH HOH 445 A HOH 145 3 HOH HOH 446 A HOH 146 3 HOH HOH 447 A HOH 147 3 HOH HOH 448 A HOH 148 3 HOH HOH 449 A HOH 149 3 HOH HOH 450 A HOH 150 3 HOH HOH 451 A HOH 151 3 HOH HOH 452 A HOH 152 3 HOH HOH 453 A HOH 153 3 HOH HOH 454 A HOH 154 3 HOH HOH 455 A HOH 155 3 HOH HOH 456 A HOH 156 3 HOH HOH 457 A HOH 157 3 HOH HOH 458 A HOH 158 3 HOH HOH 459 A HOH 159 3 HOH HOH 460 A HOH 160 3 HOH HOH 461 A HOH 161 3 HOH HOH 462 A HOH 162 3 HOH HOH 463 A HOH 163 3 HOH HOH 464 A HOH 164 3 HOH HOH 465 A HOH 165 3 HOH HOH 466 A HOH 166 3 HOH HOH 467 A HOH 167 3 HOH HOH 468 A HOH 168 3 HOH HOH 469 A HOH 169 3 HOH HOH 470 A HOH 170 3 HOH HOH 471 A HOH 171 3 HOH HOH 472 A HOH 172 3 HOH HOH 473 A HOH 173 3 HOH HOH 474 A HOH 174 3 HOH HOH 475 A HOH 175 3 HOH HOH 476 A HOH 176 3 HOH HOH 477 A HOH 177 3 HOH HOH 478 A HOH 178 3 HOH HOH 479 A HOH 179 3 HOH HOH 480 A HOH 180 3 HOH HOH 481 A HOH 181 3 HOH HOH 482 A HOH 182 3 HOH HOH 483 A HOH 183 3 HOH HOH 484 A HOH 184 3 HOH HOH 485 A HOH 185 3 HOH HOH 486 A HOH 186 3 HOH HOH 487 A HOH 187 3 HOH HOH 488 A HOH 188 3 HOH HOH 489 A HOH 189 3 HOH HOH 490 A n 1 0 A n 2 1 A n 3 2 A TYR 3 n 4 TYR 3 A GLN 4 n 5 GLN 4 A ASN 5 n 6 ASN 5 A ALA 6 n 7 ALA 6 A ASN 7 n 8 ASN 7 A TYR 8 n 9 TYR 8 A SER 9 n 10 SER 9 A ALA 10 n 11 ALA 10 A PHE 11 n 12 PHE 11 A TYR 12 n 13 TYR 12 A VAL 13 n 14 VAL 13 A SER 14 n 15 SER 14 A GLU 15 n 16 GLU 15 A PRO 16 n 17 PRO 16 A PHE 17 n 18 PHE 17 A SER 18 n 19 SER 18 A GLU 19 n 20 GLU 19 A SER 20 n 21 SER 20 A ASN 21 n 22 ASN 21 A LEU 22 n 23 LEU 22 A GLY 23 n 24 GLY 23 A ALA 24 n 25 ALA 24 A ASN 25 n 26 ASN 25 A SER 26 n 27 SER 26 A THR 27 n 28 THR 27 A HIS 28 n 29 HIS 28 A ASP 29 n 30 ASP 29 A PHE 30 n 31 PHE 30 A VAL 31 n 32 VAL 31 A TYR 32 n 33 TYR 32 A TYR 33 n 34 TYR 33 A ASN 34 n 35 ASN 34 A MSE 35 n 36 MSE 35 A LEU 36 n 37 LEU 36 A ARG 37 n 38 ARG 37 A MSE 38 n 39 MSE 38 A TRP 39 n 40 TRP 39 A LYS 40 n 41 LYS 40 A GLY 41 n 42 GLY 41 A GLU 42 n 43 GLU 42 A ASP 43 n 44 ASP 43 A ASN 44 n 45 ASN 44 A SER 45 n 46 SER 45 A PHE 46 n 47 PHE 46 A PRO 47 n 48 PRO 47 A PHE 48 n 49 PHE 48 A ASN 49 n 50 ASN 49 A ASP 50 n 51 ASP 50 A ALA 51 n 52 ALA 51 A HIS 52 n 53 HIS 52 A ASP 53 n 54 ASP 53 A LYS 54 n 55 LYS 54 A THR 55 n 56 THR 55 A TYR 56 n 57 TYR 56 A ASN 57 n 58 ASN 57 A VAL 58 n 59 VAL 58 A ARG 59 n 60 ARG 59 A ASP 60 n 61 ASP 60 A GLY 61 n 62 GLY 61 A SER 62 n 63 SER 62 A ASP 63 n 64 ASP 63 A TRP 64 n 65 TRP 64 A GLU 65 n 66 GLU 65 A LYS 66 n 67 LYS 66 A THR 67 n 68 THR 67 A LEU 68 n 69 LEU 68 A LYS 69 n 70 LYS 69 A PRO 70 n 71 PRO 70 A ARG 71 n 72 ARG 71 A LEU 72 n 73 LEU 72 A HIS 73 n 74 HIS 73 A THR 74 n 75 THR 74 A ARG 75 n 76 ARG 75 A LEU 76 n 77 LEU 76 A ASP 77 n 78 ASP 77 A ASN 78 n 79 ASN 78 A SER 79 n 80 SER 79 A LYS 80 n 81 LYS 80 A ASN 81 n 82 ASN 81 A ILE 82 n 83 ILE 82 A ILE 83 n 84 ILE 83 A LEU 84 n 85 LEU 84 A PHE 85 n 86 PHE 85 A LEU 86 n 87 LEU 86 A SER 87 n 88 SER 87 A SER 88 n 89 SER 88 A ILE 89 n 90 ILE 89 A THR 90 n 91 THR 90 A ALA 91 n 92 ALA 91 A ASN 92 n 93 ASN 92 A SER 93 n 94 SER 93 A ARG 94 n 95 ARG 94 A ALA 95 n 96 ALA 95 A LEU 96 n 97 LEU 96 A ARG 97 n 98 ARG 97 A GLU 98 n 99 GLU 98 A GLU 99 n 100 GLU 99 A MSE 100 n 101 MSE 100 A ASN 101 n 102 ASN 101 A TYR 102 n 103 TYR 102 A GLY 103 n 104 GLY 103 A ILE 104 n 105 ILE 104 A GLY 105 n 106 GLY 105 A THR 106 n 107 THR 106 A LYS 107 n 108 LYS 107 A GLY 108 n 109 GLY 108 A LEU 109 n 110 LEU 109 A PRO 110 n 111 PRO 110 A VAL 111 n 112 VAL 111 A ILE 112 n 113 ILE 112 A VAL 113 n 114 VAL 113 A ILE 114 n 115 ILE 114 A TYR 115 n 116 TYR 115 A PRO 116 n 117 PRO 116 A ASP 117 n 118 ASP 117 A TYR 118 n 119 TYR 118 A ASP 119 n 120 ASP 119 A LYS 120 n 121 LYS 120 A LYS 121 n 122 LYS 121 A SER 122 n 123 SER 122 A ASP 123 n 124 ASP 123 A ILE 124 n 125 ILE 124 A VAL 125 n 126 VAL 125 A ASP 126 n 127 ASP 126 A SER 127 n 128 SER 127 A ASN 128 n 129 ASN 128 A GLY 129 n 130 GLY 129 A ASN 130 n 131 ASN 130 A PHE 131 n 132 PHE 131 A LYS 132 n 133 LYS 132 A LYS 133 n 134 LYS 133 A GLN 134 n 135 GLN 134 A ILE 135 n 136 ILE 135 A LYS 136 n 137 LYS 136 A ASP 137 n 138 ASP 137 A LEU 138 n 139 LEU 138 A TRP 139 n 140 TRP 139 A ASP 140 n 141 ASP 140 A LYS 141 n 142 LYS 141 A LEU 142 n 143 LEU 142 A PRO 143 n 144 PRO 143 A ALA 144 n 145 ALA 144 A PHE 145 n 146 PHE 145 A ARG 146 n 147 ARG 146 A ASP 147 n 148 ASP 147 A ASN 148 n 149 ASN 148 A MSE 149 n 150 MSE 149 A SER 150 n 151 SER 150 A SER 151 n 152 SER 151 A VAL 152 n 153 VAL 152 A ALA 153 n 154 ALA 153 A THR 154 n 155 THR 154 A LEU 155 n 156 LEU 155 A HIS 156 n 157 HIS 156 A ILE 157 n 158 ILE 157 A PRO 158 n 159 PRO 158 A CYS 159 n 160 CYS 159 A THR 160 n 161 THR 160 A LYS 161 n 162 LYS 161 A SER 162 n 163 SER 162 A VAL 163 n 164 VAL 163 A ILE 164 n 165 ILE 164 A ILE 165 n 166 ILE 165 A SER 166 n 167 SER 166 A ALA 167 n 168 ALA 167 A LEU 168 n 169 LEU 168 A ASN 169 n 170 ASN 169 A ASN 170 n 171 ASN 170 A GLU 171 n 172 GLU 171 A ASP 172 n 173 ASP 172 A PHE 173 n 174 PHE 173 A MSE 174 n 175 MSE 174 A VAL 175 n 176 VAL 175 A ASN 176 n 177 ASN 176 A THR 177 n 178 THR 177 A MSE 178 n 179 MSE 178 A ALA 179 n 180 ALA 179 A ASP 180 n 181 ASP 180 A ALA 181 n 182 ALA 181 A GLU 182 n 183 GLU 182 A LYS 183 n 184 LYS 183 A TYR 184 n 185 TYR 184 A TYR 185 n 186 TYR 185 A TYR 186 n 187 TYR 186 A LYS 187 n 188 LYS 187 A PRO 188 n 189 PRO 188 A author_and_software_defined_assembly PISA 1 monomeric gel filtration A MSE 35 SELENOMETHIONINE A MSE 36 MET A MSE 38 SELENOMETHIONINE A MSE 39 MET A MSE 100 SELENOMETHIONINE A MSE 101 MET A MSE 149 SELENOMETHIONINE A MSE 150 MET A MSE 174 SELENOMETHIONINE A MSE 175 MET A MSE 178 SELENOMETHIONINE A MSE 179 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ALA 6 A N ALA 7 A O LYS 80 A O LYS 81 A N ILE 82 A N ILE 83 A O ILE 112 A O ILE 113 A N VAL 113 A N VAL 114 A O LEU 155 A O LEU 156 A N THR 154 A N THR 155 A O TYR 184 A O TYR 185 1 A CG TYR 3 A CG TYR 4 1 Y 1 A CD1 TYR 3 A CD1 TYR 4 1 Y 1 A CD2 TYR 3 A CD2 TYR 4 1 Y 1 A CE1 TYR 3 A CE1 TYR 4 1 Y 1 A CE2 TYR 3 A CE2 TYR 4 1 Y 1 A CZ TYR 3 A CZ TYR 4 1 Y 1 A OH TYR 3 A OH TYR 4 1 Y 1 A CD LYS 54 A CD LYS 55 1 Y 1 A CE LYS 54 A CE LYS 55 1 Y 1 A NZ LYS 54 A NZ LYS 55 1 Y 1 A CE LYS 66 A CE LYS 67 1 Y 1 A NZ LYS 66 A NZ LYS 67 1 Y 1 A CE LYS 120 A CE LYS 121 1 Y 1 A NZ LYS 120 A NZ LYS 121 1 Y 1 A GLY 0 A GLY 1 1 Y 1 A MSE 1 A MSE 2 1 Y 1 A SER 2 A SER 3 1 Y 1 3.75 0.50 120.30 124.05 A A A NE CZ NH1 ARG ARG ARG 97 97 97 B B B N 1 -4.37 0.50 120.30 115.93 A A A NE CZ NH2 ARG ARG ARG 97 97 97 B B B N 1 A SER 20 B -49.10 -7.72 1 A THR 55 -176.86 136.36 1 A THR 67 -134.51 -57.72 77.73 12.960 3.76 0.040 0.000 0.000 -0.010 0.000 -0.030 0.982 0.978 1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.85 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3. (4R)-2-METHYLPENTANE-2,4-DIOL (MRD) MODELED IS PRESENT IN CRYSTALLIZATION SOLUTION. 4. CISPEPTIDE 28-29 ARE SUPPORTED BY DENSITY. 0.139 0.117 0.118 1.200 32.461 2621 51494 5.100 99.350 1.00 0.17 1.059 0.021 RANDOM 1 THROUGHOUT 0.00 SAD 0.036 0.034 0.800 0.800 1.200 MAXIMUM LIKELIHOOD WITH PHASES MASK 1.200 32.461 301 1808 8 0 1499 0.014 0.022 1743 0.001 0.020 1186 1.533 1.944 2391 0.949 3.000 2914 6.344 5.000 233 35.497 24.889 90 11.499 15.000 308 19.899 15.000 9 0.093 0.200 252 0.009 0.020 2003 0.002 0.020 362 1.596 1.500 1044 0.525 1.500 412 2.347 2.000 1712 3.239 3.000 699 4.371 4.500 662 1.371 3.000 2929 0.225 0.201 1.231 190 3330 3520 20 93.640 8.178 1.20 32.461 3HYN 51559 -3.00 0.076 1 9.100 99.300 0.374 1.20 1.24 2.4 14177 4529 95.00 0.318 1.24 1.29 3.0 18177 5194 100.00 0.268 1.29 1.35 3.7 18508 5256 100.00 0.224 1.35 1.42 4.5 17865 5057 99.90 0.188 1.42 1.51 5.5 18528 5220 100.00 0.147 1.51 1.63 7.4 18782 5289 99.90 0.121 1.63 1.79 9.2 17854 5055 99.70 0.092 1.79 2.05 12.0 20302 5232 99.60 0.077 2.05 2.58 17.9 32414 5240 99.80 0.056 2.58 32.461 23.6 36452 5483 99.00 refinement Garib N. Murshudov garib@ysbl.york.ac.uk Fortran_77 http://www.ccp4.ac.uk/dist/html/refmac5.html REFMAC program 5.5.0092 refinement P.D. Adams PDAdams@lbl.gov C++ http://www.phenix-online.org/ PHENIX package phasing George M. Sheldrick gsheldr@shelx.uni-ac.gwdg.de Fortran_77 http://shelx.uni-ac.gwdg.de/SHELX/ SHELX package model building D.C. & J.S. Richardson lab molprobity@kinemage.biochem.duke.edu http://kinemage.biochem.duke.edu/molprobity/ MolProbity package 3beta29 data scaling Wolfgang Kabsch http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html XSCALE package data extraction PDB help@deposit.rcsb.org June 11, 2008 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.006 data reduction XDS phasing SHELXD phasing autoSHARP Putative signal transduction protein Crystal structure of a putative signal transduction protein (eubrec_0645) from eubacterium rectale atcc 33656 at 1.20 A resolution 1 N N 2 N N 3 N N ANALYTICAL SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS THE ASSIGNMENT OF A MONOMER AS THE SIGNIFICANT OLIGOMERIZATION STATE IN SOLUTION. A GLY 23 A GLY 24 HELX_P A THR 27 A THR 28 5 1 5 A ASP 29 A ASP 30 HELX_P A ASP 43 A ASP 44 1 2 15 A THR 67 A THR 68 HELX_P A ASN 78 A ASN 79 1 3 12 A SER 93 A SER 94 HELX_P A ILE 104 A ILE 105 1 4 12 A LYS 120 A LYS 121 HELX_P A ILE 124 A ILE 125 5 5 5 A LYS 132 A LYS 133 HELX_P A LYS 141 A LYS 142 1 6 10 A LEU 142 A LEU 143 HELX_P A ASP 147 A ASP 148 1 7 6 A ASN 148 A ASN 149 HELX_P A SER 151 A SER 152 5 8 4 A THR 160 A THR 161 HELX_P A ASN 169 A ASN 170 1 9 10 A ASN 170 A ASN 171 HELX_P A MSE 178 A MSE 179 5 10 9 covale 1.325 both A ASN 34 A C ASN 35 1_555 A MSE 35 A N MSE 36 1_555 covale 1.340 both A MSE 35 A C MSE 36 1_555 A LEU 36 A N LEU 37 1_555 covale 1.320 both A ARG 37 A C ARG 38 1_555 A MSE 38 A N MSE 39 1_555 covale 1.332 both A MSE 38 A C MSE 39 1_555 A TRP 39 A N TRP 40 1_555 covale 1.326 both A GLU 99 A C GLU 100 1_555 A MSE 100 A N MSE 101 1_555 covale 1.349 both A MSE 100 A C MSE 101 1_555 A ASN 101 A N ASN 102 1_555 covale 1.328 both A ASN 148 A C ASN 149 1_555 A MSE 149 A N MSE 150 1_555 covale 1.339 both A MSE 149 A C MSE 150 1_555 A SER 150 A N SER 151 1_555 covale 1.343 both A PHE 173 A C PHE 174 1_555 A MSE 174 A N MSE 175 1_555 covale 1.339 both A MSE 174 A C MSE 175 1_555 A VAL 175 A N VAL 176 1_555 covale 1.336 both A THR 177 A C THR 178 1_555 A MSE 178 A N MSE 179 1_555 covale 1.317 both A MSE 178 A C MSE 179 1_555 A ALA 179 A N ALA 180 1_555 SIGNALING PROTEIN Duf1863 family protein, nucleotide-binding protein, structural genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, signaling protein A GLU 15 A GLU 16 1 A PRO 16 A PRO 17 -2.36 A HIS 28 A HIS 29 1 A ASP 29 A ASP 30 -0.48 3HYN PDB 1 1 3HYN GMSYQNANYSAFYVSEPFSESNLGANSTHDFVYYNMLRMWKGEDNSFPFNDAHDKTYNVRDGSDWEKTLKPRLHTRLDNS KNIILFLSSITANSRALREEMNYGIGTKGLPVIVIYPDYDKKSDIVDSNGNFKKQIKDLWDKLPAFRDNMSSVATLHIPC TKSVIISALNNEDFMVNTMADAEKYYYKP 0 188 3HYN 0 188 3HYN A 1 1 189 5 parallel parallel parallel parallel A ALA 6 A ALA 7 A ALA 10 A ALA 11 A SER 79 A SER 80 A PHE 85 A PHE 86 A VAL 111 A VAL 112 A TYR 115 A TYR 116 A ALA 153 A ALA 154 A PRO 158 A PRO 159 A GLU 182 A GLU 183 A TYR 185 A TYR 186 BINDING SITE FOR RESIDUE MRD A 189 Software 9 A ASN 21 A ASN 22 9 3_545 A LEU 22 A LEU 23 9 3_545 A GLY 23 A GLY 24 9 3_545 A ASN 170 A ASN 171 9 1_555 A ASP 172 A ASP 173 9 1_555 A PHE 173 A PHE 174 9 1_555 A TYR 184 A TYR 185 9 1_555 A TYR 185 A TYR 186 9 1_555 A HOH 247 C HOH 9 1_555 19 P 21 21 21