0.011970
0.000000
0.000000
0.000000
0.011117
0.000000
0.000000
0.000000
0.012089
0.000000
0.000000
0.000000
Pairet, B.
Jaenicke, E.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.000
90.000
90.000
83.540
89.950
82.720
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C34 H32 Fe N4 O4
616.487
PROTOPORPHYRIN IX CONTAINING FE
HEME
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
O4 P -3
94.971
PHOSPHATE ION
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
C
N
138
N
C
N
139
N
C
N
140
N
C
Y
141
N
C
Y
142
N
C
Y
143
N
C
Y
144
N
C
N
145
N
C
N
146
N
C
N
147
N
C
N
148
N
C
N
149
N
O
N
150
N
O
N
151
N
C
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
C
N
156
N
C
N
157
N
C
Y
158
N
C
Y
159
N
C
Y
160
N
C
Y
161
N
C
N
162
N
C
N
163
N
C
N
164
N
C
N
165
N
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
C
N
171
N
C
N
172
N
C
N
173
N
O
N
174
N
O
Y
175
N
N
N
176
N
N
Y
177
N
N
N
178
N
N
N
179
N
FE
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
N
N
213
S
C
N
214
N
C
N
215
N
O
N
216
N
C
Y
217
N
C
Y
218
N
N
Y
219
N
C
Y
220
N
C
Y
221
N
N
N
222
N
O
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
O
N
234
N
H
N
235
N
H
N
236
N
N
N
237
S
C
N
238
N
C
N
239
N
O
N
240
S
C
N
241
N
C
N
242
N
C
N
243
N
C
N
244
N
O
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
N
N
259
S
C
N
260
N
C
N
261
N
O
N
262
N
C
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
N
N
281
S
C
N
282
N
C
N
283
N
O
N
284
N
C
N
285
N
C
N
286
N
C
N
287
N
C
N
288
N
N
N
289
N
O
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
N
N
306
S
C
N
307
N
C
N
308
N
O
N
309
N
C
N
310
N
C
N
311
N
S
N
312
N
C
N
313
N
O
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
N
N
326
S
C
N
327
N
C
N
328
N
O
N
329
N
C
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
Y
335
N
C
N
336
N
O
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
P
N
349
N
O
N
350
N
O
N
351
N
O
N
352
N
O
N
353
N
N
N
354
S
C
N
355
N
C
N
356
N
O
N
357
N
C
N
358
N
C
N
359
N
C
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
N
N
371
S
C
N
372
N
C
N
373
N
O
N
374
N
C
N
375
N
O
N
376
N
O
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
N
N
385
S
C
N
386
N
C
N
387
N
O
N
388
R
C
N
389
N
O
N
390
N
C
N
391
N
O
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
N
N
402
S
C
N
403
N
C
N
404
N
O
N
405
N
C
Y
406
N
C
Y
407
N
C
Y
408
N
C
Y
409
N
N
Y
410
N
C
Y
411
N
C
Y
412
N
C
Y
413
N
C
Y
414
N
C
N
415
N
O
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
N
N
429
S
C
N
430
N
C
N
431
N
O
N
432
N
C
Y
433
N
C
Y
434
N
C
Y
435
N
C
Y
436
N
C
Y
437
N
C
Y
438
N
C
N
439
N
O
N
440
N
O
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
N
N
453
S
C
N
454
N
C
N
455
N
O
N
456
N
C
N
457
N
C
N
458
N
C
N
459
N
O
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
doub
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
sing
N
136
N
doub
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
Y
141
N
doub
Y
142
N
sing
Y
143
N
sing
N
144
N
sing
Y
145
N
doub
N
146
N
sing
Y
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
doub
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
doub
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
doub
N
170
N
sing
N
171
N
sing
N
172
N
sing
Y
173
N
sing
Y
174
N
sing
Y
175
N
doub
N
176
N
sing
Y
177
N
sing
N
178
N
sing
Y
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
doub
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
doub
N
189
N
doub
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
doub
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
doub
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
Y
222
N
sing
Y
223
N
doub
Y
224
N
doub
N
225
N
sing
Y
226
N
sing
N
227
N
sing
Y
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
doub
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
doub
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
doub
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
doub
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
doub
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
Y
330
N
doub
Y
331
N
sing
Y
332
N
sing
N
333
N
sing
Y
334
N
doub
N
335
N
sing
Y
336
N
doub
N
337
N
sing
Y
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
doub
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
doub
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
doub
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
doub
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
doub
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
Y
403
N
doub
Y
404
N
sing
Y
405
N
sing
N
406
N
sing
Y
407
N
doub
Y
408
N
sing
Y
409
N
sing
N
410
N
sing
Y
411
N
sing
Y
412
N
doub
N
413
N
sing
Y
414
N
doub
N
415
N
sing
Y
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
doub
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
Y
431
N
doub
Y
432
N
sing
Y
433
N
sing
N
434
N
sing
Y
435
N
doub
N
436
N
sing
Y
437
N
doub
N
438
N
sing
Y
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
doub
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
US
Plos One
1932-6203
5
e12389
e12389
10.1371/journal.pone.0012389
20811494
Structure of the altitude adapted hemoglobin of guinea pig in the R2-state.
2010
10.2210/pdb3hyu/pdb
pdb_00003hyu
100
1
IMAGE PLATE
2009-03-06
MAR scanner 345 mm plate
MIRRORS
SINGLE WAVELENGTH
M
x-ray
1
1.54
1.0
472680
0.052
1.670
36377
99.20
1.54
ROTATING ANODE
BRUKER AXS MICROSTAR-H
15253.323
Hemoglobin subunit alpha
1
nat
polymer
15946.331
Hemoglobin subunit beta
1
nat
polymer
616.487
PROTOPORPHYRIN IX CONTAINING FE
2
syn
non-polymer
94.971
PHOSPHATE ION
4
syn
non-polymer
18.015
water
229
nat
water
Hemoglobin alpha chain, Alpha-globin
Hemoglobin beta chain, Beta-globin
no
no
VLSAADKNNVKTTWDKIGGHAAEYVAEGLTRMFTSFPTTKTYFHHIDVSPGSGDIKAHGKKVADALTTAVGHLDDLPTAL
STLSDVHAHKLRVDPVNFKFLNHCLLVTLAAHLGADFTPSIHASLDKFFASVSTVLTSKYR
VLSAADKNNVKTTWDKIGGHAAEYVAEGLTRMFTSFPTTKTYFHHIDVSPGSGDIKAHGKKVADALTTAVGHLDDLPTAL
STLSDVHAHKLRVDPVNFKFLNHCLLVTLAAHLGADFTPSIHASLDKFFASVSTVLTSKYR
A
polypeptide(L)
no
no
VHLTAAEKSAILDLWGKVNVGEIGAEALGRLLVVYPWTQRFFEKFGDLSSASAIMSNAHVKSHGAKVLASFSEGLKHLQD
LKGTFAKLSELHCDKLHVDPENFRLLGNMIVIALAHHHPSEFTPCTQAAFQKVTAGVANALAHKYH
VHLTAAEKSAILDLWGKVNVGEIGAEALGRLLVVYPWTQRFFEKFGDLSSASAIMSNAHVKSHGAKVLASFSEGLKHLQD
LKGTFAKLSELHCDKLHVDPENFRLLGNMIVIALAHHHPSEFTPCTQAAFQKVTAGVANALAHKYH
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
guinea pig
Blood
sample
10141
Cavia porcellus
Dunkin Hartley
guinea pig
sample
10141
Cavia porcellus
1
2.49
50.61
hanging drop
6.5
Sodium Phosphate, Ammonia Sulfate, pH 6.5, hanging drop, temperature 298K
298
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_conn
struct_site
repository
Initial release
Version format compliance
Database references
Other
Data collection
Database references
Derived calculations
Refinement description
1
0
2010-06-23
1
1
2011-07-13
1
2
2012-03-28
1
3
2015-02-18
1
4
2023-09-06
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2009-06-23
REL
REL
0.039
404
86.30
0.047
796
100.00
0.046
1003
99.90
0.039
1188
99.90
0.037
1322
100.00
0.040
1456
100.00
0.042
1579
100.00
0.046
1691
100.00
0.048
1800
100.00
0.053
1878
100.00
0.055
1991
100.00
0.058
2077
100.00
0.065
2163
100.00
0.072
2241
100.00
0.083
2312
99.90
0.098
2388
100.00
0.113
2463
100.00
0.133
2544
100.00
0.166
2615
100.00
0.255
2466
92.00
HEM
PROTOPORPHYRIN IX CONTAINING FE
PO4
PHOSPHATE ION
HOH
water
2D5X
PDB ENTRY 2D5X
PDB
experimental model
HEM
1
3
HEM
HEM
142
A
PO4
4
4
PO4
PO4
143
A
HEM
1
3
HEM
HEM
147
B
PO4
1
4
PO4
PO4
148
B
PO4
2
4
PO4
PO4
149
B
PO4
3
4
PO4
PO4
150
B
HOH
144
5
HOH
HOH
144
A
HOH
145
5
HOH
HOH
145
A
HOH
1
5
HOH
HOH
146
A
HOH
147
5
HOH
HOH
147
A
HOH
148
5
HOH
HOH
148
A
HOH
149
5
HOH
HOH
149
A
HOH
150
5
HOH
HOH
150
A
HOH
2
5
HOH
HOH
151
A
HOH
4
5
HOH
HOH
152
A
HOH
153
5
HOH
HOH
153
A
HOH
154
5
HOH
HOH
154
A
HOH
155
5
HOH
HOH
155
A
HOH
7
5
HOH
HOH
156
A
HOH
8
5
HOH
HOH
157
A
HOH
158
5
HOH
HOH
158
A
HOH
9
5
HOH
HOH
159
A
HOH
10
5
HOH
HOH
160
A
HOH
12
5
HOH
HOH
161
A
HOH
13
5
HOH
HOH
162
A
HOH
15
5
HOH
HOH
163
A
HOH
164
5
HOH
HOH
164
A
HOH
165
5
HOH
HOH
165
A
HOH
16
5
HOH
HOH
166
A
HOH
167
5
HOH
HOH
167
A
HOH
17
5
HOH
HOH
168
A
HOH
169
5
HOH
HOH
169
A
HOH
170
5
HOH
HOH
170
A
HOH
171
5
HOH
HOH
171
A
HOH
172
5
HOH
HOH
172
A
HOH
18
5
HOH
HOH
173
A
HOH
174
5
HOH
HOH
174
A
HOH
175
5
HOH
HOH
175
A
HOH
20
5
HOH
HOH
176
A
HOH
177
5
HOH
HOH
177
A
HOH
178
5
HOH
HOH
178
A
HOH
179
5
HOH
HOH
179
A
HOH
22
5
HOH
HOH
180
A
HOH
23
5
HOH
HOH
181
A
HOH
182
5
HOH
HOH
182
A
HOH
183
5
HOH
HOH
183
A
HOH
184
5
HOH
HOH
184
A
HOH
24
5
HOH
HOH
185
A
HOH
25
5
HOH
HOH
186
A
HOH
26
5
HOH
HOH
187
A
HOH
188
5
HOH
HOH
188
A
HOH
29
5
HOH
HOH
189
A
HOH
190
5
HOH
HOH
190
A
HOH
191
5
HOH
HOH
191
A
HOH
30
5
HOH
HOH
192
A
HOH
31
5
HOH
HOH
193
A
HOH
32
5
HOH
HOH
194
A
HOH
195
5
HOH
HOH
195
A
HOH
33
5
HOH
HOH
196
A
HOH
36
5
HOH
HOH
197
A
HOH
198
5
HOH
HOH
198
A
HOH
38
5
HOH
HOH
199
A
HOH
200
5
HOH
HOH
200
A
HOH
39
5
HOH
HOH
201
A
HOH
40
5
HOH
HOH
202
A
HOH
203
5
HOH
HOH
203
A
HOH
41
5
HOH
HOH
204
A
HOH
44
5
HOH
HOH
205
A
HOH
227
5
HOH
HOH
206
A
HOH
207
5
HOH
HOH
207
A
HOH
45
5
HOH
HOH
208
A
HOH
209
5
HOH
HOH
209
A
HOH
49
5
HOH
HOH
210
A
HOH
211
5
HOH
HOH
211
A
HOH
212
5
HOH
HOH
212
A
HOH
50
5
HOH
HOH
213
A
HOH
51
5
HOH
HOH
214
A
HOH
215
5
HOH
HOH
215
A
HOH
216
5
HOH
HOH
216
A
HOH
52
5
HOH
HOH
217
A
HOH
218
5
HOH
HOH
218
A
HOH
219
5
HOH
HOH
219
A
HOH
53
5
HOH
HOH
220
A
HOH
54
5
HOH
HOH
221
A
HOH
55
5
HOH
HOH
222
A
HOH
223
5
HOH
HOH
223
A
HOH
224
5
HOH
HOH
224
A
HOH
56
5
HOH
HOH
225
A
HOH
57
5
HOH
HOH
226
A
HOH
60
5
HOH
HOH
227
A
HOH
228
5
HOH
HOH
228
A
HOH
229
5
HOH
HOH
229
A
HOH
63
5
HOH
HOH
230
A
HOH
66
5
HOH
HOH
231
A
HOH
67
5
HOH
HOH
232
A
HOH
69
5
HOH
HOH
233
A
HOH
71
5
HOH
HOH
234
A
HOH
73
5
HOH
HOH
235
A
HOH
74
5
HOH
HOH
236
A
HOH
75
5
HOH
HOH
237
A
HOH
78
5
HOH
HOH
238
A
HOH
79
5
HOH
HOH
239
A
HOH
80
5
HOH
HOH
240
A
HOH
82
5
HOH
HOH
241
A
HOH
83
5
HOH
HOH
242
A
HOH
85
5
HOH
HOH
243
A
HOH
86
5
HOH
HOH
244
A
HOH
87
5
HOH
HOH
245
A
HOH
88
5
HOH
HOH
246
A
HOH
91
5
HOH
HOH
247
A
HOH
93
5
HOH
HOH
248
A
HOH
95
5
HOH
HOH
249
A
HOH
98
5
HOH
HOH
250
A
HOH
99
5
HOH
HOH
251
A
HOH
100
5
HOH
HOH
252
A
HOH
103
5
HOH
HOH
253
A
HOH
105
5
HOH
HOH
254
A
HOH
108
5
HOH
HOH
255
A
HOH
110
5
HOH
HOH
256
A
HOH
111
5
HOH
HOH
257
A
HOH
113
5
HOH
HOH
258
A
HOH
114
5
HOH
HOH
259
A
HOH
117
5
HOH
HOH
260
A
HOH
119
5
HOH
HOH
261
A
HOH
120
5
HOH
HOH
262
A
HOH
123
5
HOH
HOH
263
A
HOH
125
5
HOH
HOH
264
A
HOH
126
5
HOH
HOH
265
A
HOH
127
5
HOH
HOH
266
A
HOH
128
5
HOH
HOH
267
A
HOH
129
5
HOH
HOH
268
A
HOH
131
5
HOH
HOH
269
A
HOH
132
5
HOH
HOH
270
A
HOH
134
5
HOH
HOH
271
A
HOH
135
5
HOH
HOH
272
A
HOH
136
5
HOH
HOH
273
A
HOH
137
5
HOH
HOH
274
A
HOH
140
5
HOH
HOH
275
A
HOH
142
5
HOH
HOH
276
A
HOH
143
5
HOH
HOH
277
A
HOH
151
5
HOH
HOH
151
B
HOH
152
5
HOH
HOH
152
B
HOH
3
5
HOH
HOH
153
B
HOH
5
5
HOH
HOH
154
B
HOH
6
5
HOH
HOH
155
B
HOH
156
5
HOH
HOH
156
B
HOH
157
5
HOH
HOH
157
B
HOH
11
5
HOH
HOH
158
B
HOH
159
5
HOH
HOH
159
B
HOH
160
5
HOH
HOH
160
B
HOH
161
5
HOH
HOH
161
B
HOH
162
5
HOH
HOH
162
B
HOH
163
5
HOH
HOH
163
B
HOH
14
5
HOH
HOH
164
B
HOH
19
5
HOH
HOH
165
B
HOH
166
5
HOH
HOH
166
B
HOH
21
5
HOH
HOH
167
B
HOH
168
5
HOH
HOH
168
B
HOH
27
5
HOH
HOH
169
B
HOH
28
5
HOH
HOH
170
B
HOH
34
5
HOH
HOH
171
B
HOH
35
5
HOH
HOH
172
B
HOH
173
5
HOH
HOH
173
B
HOH
37
5
HOH
HOH
174
B
HOH
42
5
HOH
HOH
175
B
HOH
176
5
HOH
HOH
176
B
HOH
43
5
HOH
HOH
177
B
HOH
46
5
HOH
HOH
178
B
HOH
47
5
HOH
HOH
179
B
HOH
180
5
HOH
HOH
180
B
HOH
181
5
HOH
HOH
181
B
HOH
48
5
HOH
HOH
182
B
HOH
58
5
HOH
HOH
183
B
HOH
59
5
HOH
HOH
184
B
HOH
185
5
HOH
HOH
185
B
HOH
186
5
HOH
HOH
186
B
HOH
187
5
HOH
HOH
187
B
HOH
61
5
HOH
HOH
188
B
HOH
189
5
HOH
HOH
189
B
HOH
62
5
HOH
HOH
190
B
HOH
64
5
HOH
HOH
191
B
HOH
192
5
HOH
HOH
192
B
HOH
193
5
HOH
HOH
193
B
HOH
194
5
HOH
HOH
194
B
HOH
65
5
HOH
HOH
195
B
HOH
196
5
HOH
HOH
196
B
HOH
197
5
HOH
HOH
197
B
HOH
68
5
HOH
HOH
198
B
HOH
199
5
HOH
HOH
199
B
HOH
70
5
HOH
HOH
200
B
HOH
201
5
HOH
HOH
201
B
HOH
202
5
HOH
HOH
202
B
HOH
72
5
HOH
HOH
203
B
HOH
204
5
HOH
HOH
204
B
HOH
76
5
HOH
HOH
205
B
HOH
206
5
HOH
HOH
206
B
HOH
81
5
HOH
HOH
207
B
HOH
208
5
HOH
HOH
208
B
HOH
84
5
HOH
HOH
209
B
HOH
210
5
HOH
HOH
210
B
HOH
89
5
HOH
HOH
211
B
HOH
90
5
HOH
HOH
212
B
HOH
213
5
HOH
HOH
213
B
HOH
214
5
HOH
HOH
214
B
HOH
92
5
HOH
HOH
215
B
HOH
94
5
HOH
HOH
216
B
HOH
217
5
HOH
HOH
217
B
HOH
96
5
HOH
HOH
218
B
HOH
97
5
HOH
HOH
219
B
HOH
220
5
HOH
HOH
220
B
HOH
221
5
HOH
HOH
221
B
HOH
222
5
HOH
HOH
222
B
HOH
101
5
HOH
HOH
223
B
HOH
102
5
HOH
HOH
224
B
HOH
225
5
HOH
HOH
225
B
HOH
226
5
HOH
HOH
226
B
HOH
77
5
HOH
HOH
227
B
HOH
104
5
HOH
HOH
228
B
HOH
106
5
HOH
HOH
229
B
HOH
230
5
HOH
HOH
230
B
HOH
107
5
HOH
HOH
231
B
HOH
109
5
HOH
HOH
232
B
HOH
112
5
HOH
HOH
233
B
HOH
115
5
HOH
HOH
234
B
HOH
116
5
HOH
HOH
235
B
HOH
118
5
HOH
HOH
236
B
HOH
121
5
HOH
HOH
237
B
HOH
122
5
HOH
HOH
238
B
HOH
124
5
HOH
HOH
239
B
HOH
130
5
HOH
HOH
240
B
HOH
133
5
HOH
HOH
241
B
HOH
138
5
HOH
HOH
242
B
HOH
139
5
HOH
HOH
243
B
HOH
141
5
HOH
HOH
244
B
HOH
146
5
HOH
HOH
245
B
34.090
2.500
2.500
19.590
19.590
Phaser MODE: MR_AUTO
VAL
1
n
1
VAL
1
A
LEU
2
n
2
LEU
2
A
SER
3
n
3
SER
3
A
ALA
4
n
4
ALA
4
A
ALA
5
n
5
ALA
5
A
ASP
6
n
6
ASP
6
A
LYS
7
n
7
LYS
7
A
ASN
8
n
8
ASN
8
A
ASN
9
n
9
ASN
9
A
VAL
10
n
10
VAL
10
A
LYS
11
n
11
LYS
11
A
THR
12
n
12
THR
12
A
THR
13
n
13
THR
13
A
TRP
14
n
14
TRP
14
A
ASP
15
n
15
ASP
15
A
LYS
16
n
16
LYS
16
A
ILE
17
n
17
ILE
17
A
GLY
18
n
18
GLY
18
A
GLY
19
n
19
GLY
19
A
HIS
20
n
20
HIS
20
A
ALA
21
n
21
ALA
21
A
ALA
22
n
22
ALA
22
A
GLU
23
n
23
GLU
23
A
TYR
24
n
24
TYR
24
A
VAL
25
n
25
VAL
25
A
ALA
26
n
26
ALA
26
A
GLU
27
n
27
GLU
27
A
GLY
28
n
28
GLY
28
A
LEU
29
n
29
LEU
29
A
THR
30
n
30
THR
30
A
ARG
31
n
31
ARG
31
A
MET
32
n
32
MET
32
A
PHE
33
n
33
PHE
33
A
THR
34
n
34
THR
34
A
SER
35
n
35
SER
35
A
PHE
36
n
36
PHE
36
A
PRO
37
n
37
PRO
37
A
THR
38
n
38
THR
38
A
THR
39
n
39
THR
39
A
LYS
40
n
40
LYS
40
A
THR
41
n
41
THR
41
A
TYR
42
n
42
TYR
42
A
PHE
43
n
43
PHE
43
A
HIS
44
n
44
HIS
44
A
HIS
45
n
45
HIS
45
A
ILE
46
n
46
ILE
46
A
ASP
47
n
47
ASP
47
A
VAL
48
n
48
VAL
48
A
SER
49
n
49
SER
49
A
PRO
50
n
50
PRO
50
A
GLY
51
n
51
GLY
51
A
SER
52
n
52
SER
52
A
GLY
53
n
53
GLY
53
A
ASP
54
n
54
ASP
54
A
ILE
55
n
55
ILE
55
A
LYS
56
n
56
LYS
56
A
ALA
57
n
57
ALA
57
A
HIS
58
n
58
HIS
58
A
GLY
59
n
59
GLY
59
A
LYS
60
n
60
LYS
60
A
LYS
61
n
61
LYS
61
A
VAL
62
n
62
VAL
62
A
ALA
63
n
63
ALA
63
A
ASP
64
n
64
ASP
64
A
ALA
65
n
65
ALA
65
A
LEU
66
n
66
LEU
66
A
THR
67
n
67
THR
67
A
THR
68
n
68
THR
68
A
ALA
69
n
69
ALA
69
A
VAL
70
n
70
VAL
70
A
GLY
71
n
71
GLY
71
A
HIS
72
n
72
HIS
72
A
LEU
73
n
73
LEU
73
A
ASP
74
n
74
ASP
74
A
ASP
75
n
75
ASP
75
A
LEU
76
n
76
LEU
76
A
PRO
77
n
77
PRO
77
A
THR
78
n
78
THR
78
A
ALA
79
n
79
ALA
79
A
LEU
80
n
80
LEU
80
A
SER
81
n
81
SER
81
A
THR
82
n
82
THR
82
A
LEU
83
n
83
LEU
83
A
SER
84
n
84
SER
84
A
ASP
85
n
85
ASP
85
A
VAL
86
n
86
VAL
86
A
HIS
87
n
87
HIS
87
A
ALA
88
n
88
ALA
88
A
HIS
89
n
89
HIS
89
A
LYS
90
n
90
LYS
90
A
LEU
91
n
91
LEU
91
A
ARG
92
n
92
ARG
92
A
VAL
93
n
93
VAL
93
A
ASP
94
n
94
ASP
94
A
PRO
95
n
95
PRO
95
A
VAL
96
n
96
VAL
96
A
ASN
97
n
97
ASN
97
A
PHE
98
n
98
PHE
98
A
LYS
99
n
99
LYS
99
A
PHE
100
n
100
PHE
100
A
LEU
101
n
101
LEU
101
A
ASN
102
n
102
ASN
102
A
HIS
103
n
103
HIS
103
A
CYS
104
n
104
CYS
104
A
LEU
105
n
105
LEU
105
A
LEU
106
n
106
LEU
106
A
VAL
107
n
107
VAL
107
A
THR
108
n
108
THR
108
A
LEU
109
n
109
LEU
109
A
ALA
110
n
110
ALA
110
A
ALA
111
n
111
ALA
111
A
HIS
112
n
112
HIS
112
A
LEU
113
n
113
LEU
113
A
GLY
114
n
114
GLY
114
A
ALA
115
n
115
ALA
115
A
ASP
116
n
116
ASP
116
A
PHE
117
n
117
PHE
117
A
THR
118
n
118
THR
118
A
PRO
119
n
119
PRO
119
A
SER
120
n
120
SER
120
A
ILE
121
n
121
ILE
121
A
HIS
122
n
122
HIS
122
A
ALA
123
n
123
ALA
123
A
SER
124
n
124
SER
124
A
LEU
125
n
125
LEU
125
A
ASP
126
n
126
ASP
126
A
LYS
127
n
127
LYS
127
A
PHE
128
n
128
PHE
128
A
PHE
129
n
129
PHE
129
A
ALA
130
n
130
ALA
130
A
SER
131
n
131
SER
131
A
VAL
132
n
132
VAL
132
A
SER
133
n
133
SER
133
A
THR
134
n
134
THR
134
A
VAL
135
n
135
VAL
135
A
LEU
136
n
136
LEU
136
A
THR
137
n
137
THR
137
A
SER
138
n
138
SER
138
A
LYS
139
n
139
LYS
139
A
TYR
140
n
140
TYR
140
A
ARG
141
n
141
ARG
141
A
VAL
1
n
1
VAL
1
B
HIS
2
n
2
HIS
2
B
LEU
3
n
3
LEU
3
B
THR
4
n
4
THR
4
B
ALA
5
n
5
ALA
5
B
ALA
6
n
6
ALA
6
B
GLU
7
n
7
GLU
7
B
LYS
8
n
8
LYS
8
B
SER
9
n
9
SER
9
B
ALA
10
n
10
ALA
10
B
ILE
11
n
11
ILE
11
B
LEU
12
n
12
LEU
12
B
ASP
13
n
13
ASP
13
B
LEU
14
n
14
LEU
14
B
TRP
15
n
15
TRP
15
B
GLY
16
n
16
GLY
16
B
LYS
17
n
17
LYS
17
B
VAL
18
n
18
VAL
18
B
ASN
19
n
19
ASN
19
B
VAL
20
n
20
VAL
20
B
GLY
21
n
21
GLY
21
B
GLU
22
n
22
GLU
22
B
ILE
23
n
23
ILE
23
B
GLY
24
n
24
GLY
24
B
ALA
25
n
25
ALA
25
B
GLU
26
n
26
GLU
26
B
ALA
27
n
27
ALA
27
B
LEU
28
n
28
LEU
28
B
GLY
29
n
29
GLY
29
B
ARG
30
n
30
ARG
30
B
LEU
31
n
31
LEU
31
B
LEU
32
n
32
LEU
32
B
VAL
33
n
33
VAL
33
B
VAL
34
n
34
VAL
34
B
TYR
35
n
35
TYR
35
B
PRO
36
n
36
PRO
36
B
TRP
37
n
37
TRP
37
B
THR
38
n
38
THR
38
B
GLN
39
n
39
GLN
39
B
ARG
40
n
40
ARG
40
B
PHE
41
n
41
PHE
41
B
PHE
42
n
42
PHE
42
B
GLU
43
n
43
GLU
43
B
LYS
44
n
44
LYS
44
B
PHE
45
n
45
PHE
45
B
GLY
46
n
46
GLY
46
B
ASP
47
n
47
ASP
47
B
LEU
48
n
48
LEU
48
B
SER
49
n
49
SER
49
B
SER
50
n
50
SER
50
B
ALA
51
n
51
ALA
51
B
SER
52
n
52
SER
52
B
ALA
53
n
53
ALA
53
B
ILE
54
n
54
ILE
54
B
MET
55
n
55
MET
55
B
SER
56
n
56
SER
56
B
ASN
57
n
57
ASN
57
B
ALA
58
n
58
ALA
58
B
HIS
59
n
59
HIS
59
B
VAL
60
n
60
VAL
60
B
LYS
61
n
61
LYS
61
B
SER
62
n
62
SER
62
B
HIS
63
n
63
HIS
63
B
GLY
64
n
64
GLY
64
B
ALA
65
n
65
ALA
65
B
LYS
66
n
66
LYS
66
B
VAL
67
n
67
VAL
67
B
LEU
68
n
68
LEU
68
B
ALA
69
n
69
ALA
69
B
SER
70
n
70
SER
70
B
PHE
71
n
71
PHE
71
B
SER
72
n
72
SER
72
B
GLU
73
n
73
GLU
73
B
GLY
74
n
74
GLY
74
B
LEU
75
n
75
LEU
75
B
LYS
76
n
76
LYS
76
B
HIS
77
n
77
HIS
77
B
LEU
78
n
78
LEU
78
B
GLN
79
n
79
GLN
79
B
ASP
80
n
80
ASP
80
B
LEU
81
n
81
LEU
81
B
LYS
82
n
82
LYS
82
B
GLY
83
n
83
GLY
83
B
THR
84
n
84
THR
84
B
PHE
85
n
85
PHE
85
B
ALA
86
n
86
ALA
86
B
LYS
87
n
87
LYS
87
B
LEU
88
n
88
LEU
88
B
SER
89
n
89
SER
89
B
GLU
90
n
90
GLU
90
B
LEU
91
n
91
LEU
91
B
HIS
92
n
92
HIS
92
B
CYS
93
n
93
CYS
93
B
ASP
94
n
94
ASP
94
B
LYS
95
n
95
LYS
95
B
LEU
96
n
96
LEU
96
B
HIS
97
n
97
HIS
97
B
VAL
98
n
98
VAL
98
B
ASP
99
n
99
ASP
99
B
PRO
100
n
100
PRO
100
B
GLU
101
n
101
GLU
101
B
ASN
102
n
102
ASN
102
B
PHE
103
n
103
PHE
103
B
ARG
104
n
104
ARG
104
B
LEU
105
n
105
LEU
105
B
LEU
106
n
106
LEU
106
B
GLY
107
n
107
GLY
107
B
ASN
108
n
108
ASN
108
B
MET
109
n
109
MET
109
B
ILE
110
n
110
ILE
110
B
VAL
111
n
111
VAL
111
B
ILE
112
n
112
ILE
112
B
ALA
113
n
113
ALA
113
B
LEU
114
n
114
LEU
114
B
ALA
115
n
115
ALA
115
B
HIS
116
n
116
HIS
116
B
HIS
117
n
117
HIS
117
B
HIS
118
n
118
HIS
118
B
PRO
119
n
119
PRO
119
B
SER
120
n
120
SER
120
B
GLU
121
n
121
GLU
121
B
PHE
122
n
122
PHE
122
B
THR
123
n
123
THR
123
B
PRO
124
n
124
PRO
124
B
CYS
125
n
125
CYS
125
B
THR
126
n
126
THR
126
B
GLN
127
n
127
GLN
127
B
ALA
128
n
128
ALA
128
B
ALA
129
n
129
ALA
129
B
PHE
130
n
130
PHE
130
B
GLN
131
n
131
GLN
131
B
LYS
132
n
132
LYS
132
B
VAL
133
n
133
VAL
133
B
THR
134
n
134
THR
134
B
ALA
135
n
135
ALA
135
B
GLY
136
n
136
GLY
136
B
VAL
137
n
137
VAL
137
B
ALA
138
n
138
ALA
138
B
ASN
139
n
139
ASN
139
B
ALA
140
n
140
ALA
140
B
LEU
141
n
141
LEU
141
B
ALA
142
n
142
ALA
142
B
HIS
143
n
143
HIS
143
B
LYS
144
n
144
LYS
144
B
TYR
145
n
145
TYR
145
B
HIS
146
n
146
HIS
146
B
author_defined_assembly
4
tetrameric
2
A
HIS
87
A
NE2
HIS
87
1_555
A
HEM
142
C
FE
HEM
1_555
A
HEM
142
C
NA
HEM
1_555
92.6
A
HIS
87
A
NE2
HIS
87
1_555
A
HEM
142
C
FE
HEM
1_555
A
HEM
142
C
NB
HEM
1_555
92.1
A
HEM
142
C
NA
HEM
1_555
A
HEM
142
C
FE
HEM
1_555
A
HEM
142
C
NB
HEM
1_555
89.8
A
HIS
87
A
NE2
HIS
87
1_555
A
HEM
142
C
FE
HEM
1_555
A
HEM
142
C
NC
HEM
1_555
90.5
A
HEM
142
C
NA
HEM
1_555
A
HEM
142
C
FE
HEM
1_555
A
HEM
142
C
NC
HEM
1_555
176.8
A
HEM
142
C
NB
HEM
1_555
A
HEM
142
C
FE
HEM
1_555
A
HEM
142
C
NC
HEM
1_555
89.3
A
HIS
87
A
NE2
HIS
87
1_555
A
HEM
142
C
FE
HEM
1_555
A
HEM
142
C
ND
HEM
1_555
91.0
A
HEM
142
C
NA
HEM
1_555
A
HEM
142
C
FE
HEM
1_555
A
HEM
142
C
ND
HEM
1_555
89.9
A
HEM
142
C
NB
HEM
1_555
A
HEM
142
C
FE
HEM
1_555
A
HEM
142
C
ND
HEM
1_555
176.9
A
HEM
142
C
NC
HEM
1_555
A
HEM
142
C
FE
HEM
1_555
A
HEM
142
C
ND
HEM
1_555
90.8
A
HIS
87
A
NE2
HIS
87
1_555
A
HEM
142
C
FE
HEM
1_555
A
HOH
214
I
O
HOH
1_555
175.2
A
HEM
142
C
NA
HEM
1_555
A
HEM
142
C
FE
HEM
1_555
A
HOH
214
I
O
HOH
1_555
91.9
A
HEM
142
C
NB
HEM
1_555
A
HEM
142
C
FE
HEM
1_555
A
HOH
214
I
O
HOH
1_555
86.2
A
HEM
142
C
NC
HEM
1_555
A
HEM
142
C
FE
HEM
1_555
A
HOH
214
I
O
HOH
1_555
85.0
A
HEM
142
C
ND
HEM
1_555
A
HEM
142
C
FE
HEM
1_555
A
HOH
214
I
O
HOH
1_555
90.7
B
HIS
92
B
NE2
HIS
92
1_555
B
HEM
147
E
FE
HEM
1_555
B
HEM
147
E
NA
HEM
1_555
90.4
B
HIS
92
B
NE2
HIS
92
1_555
B
HEM
147
E
FE
HEM
1_555
B
HEM
147
E
NB
HEM
1_555
92.1
B
HEM
147
E
NA
HEM
1_555
B
HEM
147
E
FE
HEM
1_555
B
HEM
147
E
NB
HEM
1_555
88.0
B
HIS
92
B
NE2
HIS
92
1_555
B
HEM
147
E
FE
HEM
1_555
B
HEM
147
E
NC
HEM
1_555
92.6
B
HEM
147
E
NA
HEM
1_555
B
HEM
147
E
FE
HEM
1_555
B
HEM
147
E
NC
HEM
1_555
176.6
B
HEM
147
E
NB
HEM
1_555
B
HEM
147
E
FE
HEM
1_555
B
HEM
147
E
NC
HEM
1_555
90.1
B
HIS
92
B
NE2
HIS
92
1_555
B
HEM
147
E
FE
HEM
1_555
B
HEM
147
E
ND
HEM
1_555
91.5
B
HEM
147
E
NA
HEM
1_555
B
HEM
147
E
FE
HEM
1_555
B
HEM
147
E
ND
HEM
1_555
89.7
B
HEM
147
E
NB
HEM
1_555
B
HEM
147
E
FE
HEM
1_555
B
HEM
147
E
ND
HEM
1_555
175.8
B
HEM
147
E
NC
HEM
1_555
B
HEM
147
E
FE
HEM
1_555
B
HEM
147
E
ND
HEM
1_555
92.0
B
HIS
92
B
NE2
HIS
92
1_555
B
HEM
147
E
FE
HEM
1_555
B
HOH
165
J
O
HOH
1_555
176.8
B
HEM
147
E
NA
HEM
1_555
B
HEM
147
E
FE
HEM
1_555
B
HOH
165
J
O
HOH
1_555
92.8
B
HEM
147
E
NB
HEM
1_555
B
HEM
147
E
FE
HEM
1_555
B
HOH
165
J
O
HOH
1_555
88.0
B
HEM
147
E
NC
HEM
1_555
B
HEM
147
E
FE
HEM
1_555
B
HOH
165
J
O
HOH
1_555
84.3
B
HEM
147
E
ND
HEM
1_555
B
HEM
147
E
FE
HEM
1_555
B
HOH
165
J
O
HOH
1_555
88.6
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
3_554
-x,y,-z-1/2
crystal symmetry operation
0.0000000000
0.0000000000
-41.3600000000
1
A
A
O
O
HOH
HOH
144
229
1.98
1
B
B
OE2
O
GLU
HOH
73
230
2.04
1
B
B
O
O
HOH
HOH
186
213
2.16
1
A
A
O
O
HOH
HOH
188
222
2.17
1
3.22
0.50
120.30
123.52
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
141
141
141
N
1
A
ASP
75
-152.88
69.92
1
B
ASP
80
-151.44
55.03
1
B
CYS
93
-92.91
-60.84
48.02
12.375
3.82
0.000
0.000
0.000
0.010
0.000
-0.010
0.949
0.939
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY
0.203
0.177
0.179
0.179
1.670
19.590
1822
36376
36376
5.000
99.320
0.208
0.181
1.00
0.50
0.893
1.459
0.051
0.097
0.094
RANDOM
1
THROUGHOUT
0.00
MOLECULAR REPLACEMENT
0.097
0.094
0.800
0.800
1.400
PDB ENTRY 2D5X
MAXIMUM LIKELIHOOD
MASK
1.670
19.590
229
2537
106
0
2202
0.011
0.021
2375
1.165
2.056
3252
4.485
5.000
285
36.444
23.667
90
11.144
15.000
365
7.518
15.000
6
0.076
0.200
355
0.007
0.021
1766
0.684
1.500
1426
1.344
2.000
2285
2.241
3.000
949
3.544
4.500
967
0.349
0.304
1.710
112
2335
2447
2466
20
92.130
20.501
1.670
19.59
3HYU
36376
36376
-3
-3
0.052
1
35.8
99.700
0.255
1.67
1.71
9.95
17763
2466
2466
1
92.00
data scaling
Wolfgang Kabsch
http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html
XSCALE
package
phasing
Randy J. Read
cimr-phaser@lists.cam.ac.uk
Mon Jan 29 16:49:23 2007
http://www-structmed.cimr.cam.ac.uk/phaser/
PHASER
program
2.1.4
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
data extraction
PDB
help@deposit.rcsb.org
June 11, 2008
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.005
data collection
MAR345dtb
data reduction
XDS
Crystal structure of the altitude adapted hemoglobin of guinea pig.
1
N
N
2
N
N
3
N
N
4
N
N
3
N
N
4
N
N
4
N
N
4
N
N
5
N
N
5
N
N
A
SER
3
A
SER
3
HELX_P
A
GLY
18
A
GLY
18
1
1
16
A
HIS
20
A
HIS
20
HELX_P
A
PHE
36
A
PHE
36
1
2
17
A
PRO
37
A
PRO
37
HELX_P
A
HIS
44
A
HIS
44
5
3
8
A
SER
52
A
SER
52
HELX_P
A
GLY
71
A
GLY
71
1
4
20
A
ASP
75
A
ASP
75
HELX_P
A
LEU
80
A
LEU
80
1
5
6
A
LEU
80
A
LEU
80
HELX_P
A
ALA
88
A
ALA
88
1
6
9
A
ASP
94
A
ASP
94
HELX_P
A
GLY
114
A
GLY
114
1
7
21
A
ALA
115
A
ALA
115
HELX_P
A
PHE
117
A
PHE
117
5
8
3
A
THR
118
A
THR
118
HELX_P
A
THR
137
A
THR
137
1
9
20
B
THR
4
B
THR
4
HELX_P
B
GLY
16
B
GLY
16
1
10
13
B
ASN
19
B
ASN
19
HELX_P
B
TYR
35
B
TYR
35
1
11
17
B
PRO
36
B
PRO
36
HELX_P
B
GLY
46
B
GLY
46
5
12
11
B
SER
50
B
SER
50
HELX_P
B
ASN
57
B
ASN
57
1
13
8
B
ASN
57
B
ASN
57
HELX_P
B
LEU
75
B
LEU
75
1
14
19
B
ASP
80
B
ASP
80
HELX_P
B
PHE
85
B
PHE
85
1
15
6
B
PHE
85
B
PHE
85
HELX_P
B
LYS
95
B
LYS
95
1
16
11
B
PRO
100
B
PRO
100
HELX_P
B
HIS
118
B
HIS
118
1
17
19
B
THR
123
B
THR
123
HELX_P
B
ALA
142
B
ALA
142
1
18
20
B
HIS
143
B
HIS
143
HELX_P
B
HIS
146
B
HIS
146
5
19
4
metalc
1.979
A
HIS
87
A
NE2
HIS
87
1_555
A
HEM
142
C
FE
HEM
1_555
metalc
2.083
A
HEM
142
C
FE
HEM
1_555
A
HOH
214
I
O
HOH
1_555
metalc
1.994
B
HIS
92
B
NE2
HIS
92
1_555
B
HEM
147
E
FE
HEM
1_555
metalc
2.096
B
HEM
147
E
FE
HEM
1_555
B
HOH
165
J
O
HOH
1_555
OXYGEN TRANSPORT
Oxygen Transport, Altitude Adaptation, Heme, Iron, Metal-binding, Transport
HBA_CAVPO
UNP
1
2
P01947
VLSAADKNNVKTTWDKIGGHAAEYVAEGLTRMFTSFPTTKTYFHHIDVSPGSGDIKAHGKKVADALTTAVGHLDDLPTAL
STLSDVHAHKLRVDPVNFKFLNHCLLVTLAAHLGADFTPSIHASLDKFFASVSTVLTSKYR
HBB_CAVPO
UNP
2
1
P02095
VHLTAAEKSAILDLWGKVNVGEIGAEALGRLLVVYPWTQRFFEKFGDLSSASAIMSNAHVKSHGAKVLASFSEGLKHLQD
LKGTFAKLSELHCDKLHVDPENFRLLGNMIVIALAHHHPSEFTPCTQAAFQKVTAGVANALAHKYH
2
142
3HYU
1
141
P01947
A
1
1
141
1
146
3HYU
1
146
P02095
B
2
1
146
BINDING SITE FOR RESIDUE HEM A 142
A
HEM
142
Software
14
BINDING SITE FOR RESIDUE PO4 A 143
A
PO4
143
Software
3
BINDING SITE FOR RESIDUE HEM B 147
B
HEM
147
Software
12
BINDING SITE FOR RESIDUE PO4 B 148
B
PO4
148
Software
4
BINDING SITE FOR RESIDUE PO4 B 149
B
PO4
149
Software
5
BINDING SITE FOR RESIDUE PO4 B 150
B
PO4
150
Software
6
A
TYR
42
A
TYR
42
14
1_555
A
PHE
43
A
PHE
43
14
1_555
A
HIS
45
A
HIS
45
14
1_555
A
HIS
58
A
HIS
58
14
1_555
A
LYS
61
A
LYS
61
14
1_555
A
LEU
83
A
LEU
83
14
1_555
A
HIS
87
A
HIS
87
14
1_555
A
LEU
91
A
LEU
91
14
1_555
A
ASN
97
A
ASN
97
14
1_555
A
PHE
98
A
PHE
98
14
1_555
A
LEU
101
A
LEU
101
14
1_555
A
LEU
136
A
LEU
136
14
1_555
A
HOH
172
I
HOH
14
1_555
A
HOH
214
I
HOH
14
1_555
A
PHE
36
A
PHE
36
3
1_555
A
PHE
100
A
PHE
100
3
1_555
B
ASN
108
B
ASN
108
3
1_555
B
PHE
41
B
PHE
41
12
1_555
B
PHE
42
B
PHE
42
12
1_555
B
LYS
44
B
LYS
44
12
1_555
B
HIS
63
B
HIS
63
12
1_555
B
VAL
67
B
VAL
67
12
1_555
B
HIS
92
B
HIS
92
12
1_555
B
LEU
96
B
LEU
96
12
1_555
B
ASN
102
B
ASN
102
12
1_555
B
LEU
106
B
LEU
106
12
1_555
B
LEU
141
B
LEU
141
12
1_555
B
HOH
165
J
HOH
12
1_555
B
HOH
199
J
HOH
12
1_555
B
THR
123
B
THR
123
4
1_555
B
HOH
155
J
HOH
4
1_555
B
HOH
191
J
HOH
4
1_555
B
HOH
214
J
HOH
4
1_555
B
VAL
1
B
VAL
1
5
1_555
B
LEU
78
B
LEU
78
5
1_555
B
LEU
81
B
LEU
81
5
1_555
B
LYS
82
B
LYS
82
5
1_555
B
HOH
176
J
HOH
5
1_555
B
HIS
117
B
HIS
117
6
1_555
B
HIS
118
B
HIS
118
6
1_555
B
PRO
119
B
PRO
119
6
1_555
B
SER
120
B
SER
120
6
1_555
B
GLU
121
B
GLU
121
6
1_555
B
HOH
222
J
HOH
6
1_555
20
C 2 2 21