0.022478
0.000000
0.000000
0.000000
0.011238
0.000000
0.000000
0.000000
0.009470
0.000000
0.000000
0.000000
Lima, C.D.
Yunus, A.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.000
90.000
90.000
44.487
88.980
105.598
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
ZN
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
US
Mol.Cell
MOCEFL
2168
1097-2765
35
669
682
10.1016/j.molcel.2009.07.013
19748360
Structure of the Siz/PIAS SUMO E3 ligase Siz1 and determinants required for SUMO modification of PCNA.
2009
10.2210/pdb3i2d/pdb
pdb_00003i2d
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
100
1
CCD
2006-06-03
ADSC QUANTUM 315
Si
SINGLE WAVELENGTH
M
x-ray
1
0.979
1.0
24-ID-C
APS
0.979
SYNCHROTRON
APS BEAMLINE 24-ID-C
41697.238
E3 SUMO-protein ligase SIZ1
6.-.-.-
residues 112-465
1
man
polymer
65.409
ZINC ION
1
syn
non-polymer
18.015
water
66
nat
water
SAP and Miz-finger domain-containing protein 1, Ubiquitin-like protein ligase 1
no
no
SLTPLSAITVRSMEGPPTVQQQSPSVIRQSPTQRRKTSTTSSTSRAPPPTNPDASSSSSSFAVPTIHFKESPFYKIQRLI
PELVMNVEVTGGRGMCSAKFKLSKADYNLLSNPNSKHRLYLFSGMINPLGSRGNEPIQFPFPNELRCNNVQIKDNIRGFK
SKPGTAKPADLTPHLKPYTQQNNVELIYAFTTKEYKLFGYIVEMITPEQLLEKVLQHPKIIKQATLLYLKKTLREDEEMG
LTTTSTIMSLQCPISYTRMKYPSKSINCKHLQCFDALWFLHSQLQIPTWQCPVCQIDIALENLAISEFVDDILQNCQKNV
EQVELTSDGKWTAILEDDDDSDSDSNDGSRSPEKGTLGEGAAALEHHHHHH
SLTPLSAITVRSMEGPPTVQQQSPSVIRQSPTQRRKTSTTSSTSRAPPPTNPDASSSSSSFAVPTIHFKESPFYKIQRLI
PELVMNVEVTGGRGMCSAKFKLSKADYNLLSNPNSKHRLYLFSGMINPLGSRGNEPIQFPFPNELRCNNVQIKDNIRGFK
SKPGTAKPADLTPHLKPYTQQNNVELIYAFTTKEYKLFGYIVEMITPEQLLEKVLQHPKIIKQATLLYLKKTLREDEEMG
LTTTSTIMSLQCPISYTRMKYPSKSINCKHLQCFDALWFLHSQLQIPTWQCPVCQIDIALENLAISEFVDDILQNCQKNV
EQVELTSDGKWTAILEDDDDSDSDSNDGSRSPEKGTLGEGAAALEHHHHHH
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
yeast
W3031A
sample
SIZ1, ULL1, YDR409W
4932
Saccharomyces cerevisiae
562
Escherichia coli
BL21 (DE3) CP-RIL
PLASMID
PSMT3
1
2.51
50.92
VAPOR DIFFUSION, HANGING DROP
7.5
3.5 M NaCl, 100 mM HEPES 7.5 and either 5% glycerol or xylitol, VAPOR DIFFUSION, HANGING DROP, temperature 288K
288
chem_comp_atom
chem_comp_bond
database_2
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Database references
Data collection
Database references
Derived calculations
1
0
2009-09-15
1
1
2011-07-13
1
2
2012-03-21
1
3
2024-02-21
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2009-06-29
REL
REL
ZN
ZINC ION
HOH
water
ZN
1
2
ZN
ZN
1
A
WAT
2
3
HOH
HOH
2
A
WAT
3
3
HOH
HOH
3
A
WAT
4
3
HOH
HOH
4
A
WAT
5
3
HOH
HOH
5
A
WAT
6
3
HOH
HOH
6
A
WAT
7
3
HOH
HOH
7
A
WAT
8
3
HOH
HOH
8
A
WAT
9
3
HOH
HOH
9
A
WAT
10
3
HOH
HOH
10
A
WAT
11
3
HOH
HOH
11
A
WAT
12
3
HOH
HOH
12
A
WAT
13
3
HOH
HOH
13
A
WAT
14
3
HOH
HOH
14
A
WAT
15
3
HOH
HOH
15
A
WAT
16
3
HOH
HOH
16
A
WAT
17
3
HOH
HOH
17
A
WAT
18
3
HOH
HOH
18
A
WAT
19
3
HOH
HOH
19
A
WAT
20
3
HOH
HOH
20
A
WAT
21
3
HOH
HOH
21
A
WAT
22
3
HOH
HOH
22
A
WAT
23
3
HOH
HOH
23
A
WAT
24
3
HOH
HOH
24
A
WAT
25
3
HOH
HOH
25
A
WAT
26
3
HOH
HOH
26
A
WAT
27
3
HOH
HOH
27
A
WAT
28
3
HOH
HOH
28
A
WAT
29
3
HOH
HOH
29
A
WAT
30
3
HOH
HOH
30
A
WAT
31
3
HOH
HOH
31
A
WAT
32
3
HOH
HOH
32
A
WAT
33
3
HOH
HOH
33
A
WAT
34
3
HOH
HOH
34
A
WAT
35
3
HOH
HOH
35
A
WAT
36
3
HOH
HOH
36
A
WAT
37
3
HOH
HOH
37
A
WAT
38
3
HOH
HOH
38
A
WAT
39
3
HOH
HOH
39
A
WAT
40
3
HOH
HOH
40
A
WAT
41
3
HOH
HOH
41
A
WAT
42
3
HOH
HOH
42
A
WAT
43
3
HOH
HOH
43
A
WAT
44
3
HOH
HOH
44
A
WAT
45
3
HOH
HOH
45
A
WAT
46
3
HOH
HOH
46
A
WAT
47
3
HOH
HOH
47
A
WAT
48
3
HOH
HOH
48
A
WAT
49
3
HOH
HOH
49
A
WAT
50
3
HOH
HOH
50
A
WAT
51
3
HOH
HOH
51
A
WAT
52
3
HOH
HOH
52
A
WAT
53
3
HOH
HOH
53
A
WAT
54
3
HOH
HOH
54
A
WAT
55
3
HOH
HOH
55
A
WAT
56
3
HOH
HOH
56
A
WAT
57
3
HOH
HOH
57
A
WAT
58
3
HOH
HOH
58
A
WAT
59
3
HOH
HOH
59
A
WAT
60
3
HOH
HOH
60
A
WAT
61
3
HOH
HOH
61
A
WAT
62
3
HOH
HOH
62
A
WAT
63
3
HOH
HOH
63
A
WAT
64
3
HOH
HOH
64
A
WAT
65
3
HOH
HOH
65
A
WAT
66
3
HOH
HOH
66
A
WAT
1
3
HOH
HOH
481
A
n
1
110
A
n
2
111
A
n
3
112
A
n
4
113
A
n
5
114
A
n
6
115
A
n
7
116
A
n
8
117
A
n
9
118
A
n
10
119
A
n
11
120
A
n
12
121
A
n
13
122
A
n
14
123
A
n
15
124
A
n
16
125
A
n
17
126
A
n
18
127
A
n
19
128
A
n
20
129
A
n
21
130
A
n
22
131
A
n
23
132
A
n
24
133
A
n
25
134
A
n
26
135
A
n
27
136
A
n
28
137
A
n
29
138
A
n
30
139
A
n
31
140
A
n
32
141
A
n
33
142
A
n
34
143
A
n
35
144
A
n
36
145
A
n
37
146
A
n
38
147
A
n
39
148
A
n
40
149
A
n
41
150
A
n
42
151
A
n
43
152
A
n
44
153
A
n
45
154
A
n
46
155
A
n
47
156
A
n
48
157
A
n
49
158
A
THR
159
n
50
THR
159
A
ASN
160
n
51
ASN
160
A
PRO
161
n
52
PRO
161
A
ASP
162
n
53
ASP
162
A
ALA
163
n
54
ALA
163
A
SER
164
n
55
SER
164
A
SER
165
n
56
SER
165
A
SER
166
n
57
SER
166
A
SER
167
n
58
SER
167
A
SER
168
n
59
SER
168
A
SER
169
n
60
SER
169
A
PHE
170
n
61
PHE
170
A
ALA
171
n
62
ALA
171
A
VAL
172
n
63
VAL
172
A
PRO
173
n
64
PRO
173
A
THR
174
n
65
THR
174
A
ILE
175
n
66
ILE
175
A
HIS
176
n
67
HIS
176
A
PHE
177
n
68
PHE
177
A
LYS
178
n
69
LYS
178
A
GLU
179
n
70
GLU
179
A
SER
180
n
71
SER
180
A
PRO
181
n
72
PRO
181
A
PHE
182
n
73
PHE
182
A
TYR
183
n
74
TYR
183
A
LYS
184
n
75
LYS
184
A
ILE
185
n
76
ILE
185
A
GLN
186
n
77
GLN
186
A
ARG
187
n
78
ARG
187
A
LEU
188
n
79
LEU
188
A
ILE
189
n
80
ILE
189
A
PRO
190
n
81
PRO
190
A
GLU
191
n
82
GLU
191
A
LEU
192
n
83
LEU
192
A
VAL
193
n
84
VAL
193
A
MET
194
n
85
MET
194
A
ASN
195
n
86
ASN
195
A
VAL
196
n
87
VAL
196
A
GLU
197
n
88
GLU
197
A
VAL
198
n
89
VAL
198
A
THR
199
n
90
THR
199
A
GLY
200
n
91
GLY
200
A
GLY
201
n
92
GLY
201
A
ARG
202
n
93
ARG
202
A
GLY
203
n
94
GLY
203
A
MET
204
n
95
MET
204
A
CYS
205
n
96
CYS
205
A
SER
206
n
97
SER
206
A
ALA
207
n
98
ALA
207
A
LYS
208
n
99
LYS
208
A
PHE
209
n
100
PHE
209
A
LYS
210
n
101
LYS
210
A
LEU
211
n
102
LEU
211
A
SER
212
n
103
SER
212
A
LYS
213
n
104
LYS
213
A
ALA
214
n
105
ALA
214
A
ASP
215
n
106
ASP
215
A
TYR
216
n
107
TYR
216
A
ASN
217
n
108
ASN
217
A
LEU
218
n
109
LEU
218
A
LEU
219
n
110
LEU
219
A
SER
220
n
111
SER
220
A
ASN
221
n
112
ASN
221
A
PRO
222
n
113
PRO
222
A
ASN
223
n
114
ASN
223
A
SER
224
n
115
SER
224
A
LYS
225
n
116
LYS
225
A
HIS
226
n
117
HIS
226
A
ARG
227
n
118
ARG
227
A
LEU
228
n
119
LEU
228
A
TYR
229
n
120
TYR
229
A
LEU
230
n
121
LEU
230
A
PHE
231
n
122
PHE
231
A
SER
232
n
123
SER
232
A
GLY
233
n
124
GLY
233
A
MET
234
n
125
MET
234
A
ILE
235
n
126
ILE
235
A
ASN
236
n
127
ASN
236
A
PRO
237
n
128
PRO
237
A
LEU
238
n
129
LEU
238
A
GLY
239
n
130
GLY
239
A
SER
240
n
131
SER
240
A
ARG
241
n
132
ARG
241
A
GLY
242
n
133
GLY
242
A
ASN
243
n
134
ASN
243
A
GLU
244
n
135
GLU
244
A
PRO
245
n
136
PRO
245
A
ILE
246
n
137
ILE
246
A
GLN
247
n
138
GLN
247
A
PHE
248
n
139
PHE
248
A
PRO
249
n
140
PRO
249
A
PHE
250
n
141
PHE
250
A
PRO
251
n
142
PRO
251
A
ASN
252
n
143
ASN
252
A
GLU
253
n
144
GLU
253
A
LEU
254
n
145
LEU
254
A
ARG
255
n
146
ARG
255
A
CYS
256
n
147
CYS
256
A
ASN
257
n
148
ASN
257
A
ASN
258
n
149
ASN
258
A
VAL
259
n
150
VAL
259
A
GLN
260
n
151
GLN
260
A
ILE
261
n
152
ILE
261
A
LYS
262
n
153
LYS
262
A
ASP
263
n
154
ASP
263
A
ASN
264
n
155
ASN
264
A
ILE
265
n
156
ILE
265
A
ARG
266
n
157
ARG
266
A
GLY
267
n
158
GLY
267
A
PHE
268
n
159
PHE
268
A
LYS
269
n
160
LYS
269
A
SER
270
n
161
SER
270
A
LYS
271
n
162
LYS
271
A
PRO
272
n
163
PRO
272
A
GLY
273
n
164
GLY
273
A
THR
274
n
165
THR
274
A
ALA
275
n
166
ALA
275
A
LYS
276
n
167
LYS
276
A
PRO
277
n
168
PRO
277
A
ALA
278
n
169
ALA
278
A
ASP
279
n
170
ASP
279
A
LEU
280
n
171
LEU
280
A
THR
281
n
172
THR
281
A
PRO
282
n
173
PRO
282
A
HIS
283
n
174
HIS
283
A
LEU
284
n
175
LEU
284
A
LYS
285
n
176
LYS
285
A
PRO
286
n
177
PRO
286
A
TYR
287
n
178
TYR
287
A
THR
288
n
179
THR
288
A
GLN
289
n
180
GLN
289
A
GLN
290
n
181
GLN
290
A
ASN
291
n
182
ASN
291
A
ASN
292
n
183
ASN
292
A
VAL
293
n
184
VAL
293
A
GLU
294
n
185
GLU
294
A
LEU
295
n
186
LEU
295
A
ILE
296
n
187
ILE
296
A
TYR
297
n
188
TYR
297
A
ALA
298
n
189
ALA
298
A
PHE
299
n
190
PHE
299
A
THR
300
n
191
THR
300
A
THR
301
n
192
THR
301
A
LYS
302
n
193
LYS
302
A
GLU
303
n
194
GLU
303
A
TYR
304
n
195
TYR
304
A
LYS
305
n
196
LYS
305
A
LEU
306
n
197
LEU
306
A
PHE
307
n
198
PHE
307
A
GLY
308
n
199
GLY
308
A
TYR
309
n
200
TYR
309
A
ILE
310
n
201
ILE
310
A
VAL
311
n
202
VAL
311
A
GLU
312
n
203
GLU
312
A
MET
313
n
204
MET
313
A
ILE
314
n
205
ILE
314
A
THR
315
n
206
THR
315
A
PRO
316
n
207
PRO
316
A
GLU
317
n
208
GLU
317
A
GLN
318
n
209
GLN
318
A
LEU
319
n
210
LEU
319
A
LEU
320
n
211
LEU
320
A
GLU
321
n
212
GLU
321
A
LYS
322
n
213
LYS
322
A
VAL
323
n
214
VAL
323
A
LEU
324
n
215
LEU
324
A
GLN
325
n
216
GLN
325
A
HIS
326
n
217
HIS
326
A
PRO
327
n
218
PRO
327
A
LYS
328
n
219
LYS
328
A
ILE
329
n
220
ILE
329
A
ILE
330
n
221
ILE
330
A
LYS
331
n
222
LYS
331
A
GLN
332
n
223
GLN
332
A
ALA
333
n
224
ALA
333
A
THR
334
n
225
THR
334
A
LEU
335
n
226
LEU
335
A
LEU
336
n
227
LEU
336
A
TYR
337
n
228
TYR
337
A
LEU
338
n
229
LEU
338
A
LYS
339
n
230
LYS
339
A
LYS
340
n
231
LYS
340
A
THR
341
n
232
THR
341
A
LEU
342
n
233
LEU
342
A
ARG
343
n
234
ARG
343
A
GLU
344
n
235
GLU
344
A
ASP
345
n
236
ASP
345
A
GLU
346
n
237
GLU
346
A
n
238
347
A
n
239
348
A
n
240
349
A
n
241
350
A
n
242
351
A
n
243
352
A
THR
353
n
244
THR
353
A
SER
354
n
245
SER
354
A
THR
355
n
246
THR
355
A
ILE
356
n
247
ILE
356
A
MET
357
n
248
MET
357
A
SER
358
n
249
SER
358
A
LEU
359
n
250
LEU
359
A
GLN
360
n
251
GLN
360
A
CYS
361
n
252
CYS
361
A
PRO
362
n
253
PRO
362
A
ILE
363
n
254
ILE
363
A
SER
364
n
255
SER
364
A
TYR
365
n
256
TYR
365
A
THR
366
n
257
THR
366
A
ARG
367
n
258
ARG
367
A
MET
368
n
259
MET
368
A
LYS
369
n
260
LYS
369
A
TYR
370
n
261
TYR
370
A
PRO
371
n
262
PRO
371
A
SER
372
n
263
SER
372
A
LYS
373
n
264
LYS
373
A
SER
374
n
265
SER
374
A
ILE
375
n
266
ILE
375
A
ASN
376
n
267
ASN
376
A
CYS
377
n
268
CYS
377
A
LYS
378
n
269
LYS
378
A
HIS
379
n
270
HIS
379
A
LEU
380
n
271
LEU
380
A
GLN
381
n
272
GLN
381
A
CYS
382
n
273
CYS
382
A
PHE
383
n
274
PHE
383
A
ASP
384
n
275
ASP
384
A
ALA
385
n
276
ALA
385
A
LEU
386
n
277
LEU
386
A
TRP
387
n
278
TRP
387
A
PHE
388
n
279
PHE
388
A
LEU
389
n
280
LEU
389
A
HIS
390
n
281
HIS
390
A
SER
391
n
282
SER
391
A
GLN
392
n
283
GLN
392
A
LEU
393
n
284
LEU
393
A
GLN
394
n
285
GLN
394
A
ILE
395
n
286
ILE
395
A
PRO
396
n
287
PRO
396
A
THR
397
n
288
THR
397
A
TRP
398
n
289
TRP
398
A
GLN
399
n
290
GLN
399
A
CYS
400
n
291
CYS
400
A
PRO
401
n
292
PRO
401
A
VAL
402
n
293
VAL
402
A
CYS
403
n
294
CYS
403
A
GLN
404
n
295
GLN
404
A
ILE
405
n
296
ILE
405
A
ASP
406
n
297
ASP
406
A
ILE
407
n
298
ILE
407
A
ALA
408
n
299
ALA
408
A
LEU
409
n
300
LEU
409
A
GLU
410
n
301
GLU
410
A
ASN
411
n
302
ASN
411
A
LEU
412
n
303
LEU
412
A
ALA
413
n
304
ALA
413
A
ILE
414
n
305
ILE
414
A
SER
415
n
306
SER
415
A
GLU
416
n
307
GLU
416
A
PHE
417
n
308
PHE
417
A
VAL
418
n
309
VAL
418
A
ASP
419
n
310
ASP
419
A
ASP
420
n
311
ASP
420
A
ILE
421
n
312
ILE
421
A
LEU
422
n
313
LEU
422
A
GLN
423
n
314
GLN
423
A
ASN
424
n
315
ASN
424
A
CYS
425
n
316
CYS
425
A
GLN
426
n
317
GLN
426
A
LYS
427
n
318
LYS
427
A
ASN
428
n
319
ASN
428
A
VAL
429
n
320
VAL
429
A
GLU
430
n
321
GLU
430
A
GLN
431
n
322
GLN
431
A
VAL
432
n
323
VAL
432
A
GLU
433
n
324
GLU
433
A
LEU
434
n
325
LEU
434
A
THR
435
n
326
THR
435
A
SER
436
n
327
SER
436
A
ASP
437
n
328
ASP
437
A
GLY
438
n
329
GLY
438
A
LYS
439
n
330
LYS
439
A
TRP
440
n
331
TRP
440
A
THR
441
n
332
THR
441
A
ALA
442
n
333
ALA
442
A
ILE
443
n
334
ILE
443
A
LEU
444
n
335
LEU
444
A
n
336
445
A
n
337
446
A
n
338
447
A
n
339
448
A
n
340
449
A
n
341
450
A
n
342
451
A
n
343
452
A
n
344
453
A
n
345
454
A
n
346
455
A
n
347
456
A
n
348
457
A
n
349
458
A
n
350
459
A
n
351
460
A
n
352
461
A
n
353
462
A
n
354
463
A
n
355
464
A
n
356
465
A
n
357
466
A
n
358
467
A
n
359
468
A
n
360
469
A
n
361
470
A
n
362
471
A
n
363
472
A
n
364
473
A
n
365
474
A
n
366
475
A
n
367
476
A
n
368
477
A
n
369
478
A
n
370
479
A
n
371
480
A
author_and_software_defined_assembly
PISA
1
monomeric
A
CYS
377
A
SG
CYS
268
1_555
A
ZN
1
B
ZN
ZN
1_555
A
HIS
379
A
NE2
HIS
270
1_555
110.8
A
CYS
377
A
SG
CYS
268
1_555
A
ZN
1
B
ZN
ZN
1_555
A
CYS
400
A
SG
CYS
291
1_555
110.2
A
HIS
379
A
NE2
HIS
270
1_555
A
ZN
1
B
ZN
ZN
1_555
A
CYS
400
A
SG
CYS
291
1_555
105.2
A
CYS
377
A
SG
CYS
268
1_555
A
ZN
1
B
ZN
ZN
1_555
A
CYS
403
A
SG
CYS
294
1_555
117.1
A
HIS
379
A
NE2
HIS
270
1_555
A
ZN
1
B
ZN
ZN
1_555
A
CYS
403
A
SG
CYS
294
1_555
108.9
A
CYS
400
A
SG
CYS
291
1_555
A
ZN
1
B
ZN
ZN
1_555
A
CYS
403
A
SG
CYS
294
1_555
103.8
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
VAL
196
A
N
VAL
87
A
O
TYR
304
A
O
TYR
195
A
O
VAL
311
A
O
VAL
202
A
N
ARG
227
A
N
ARG
118
A
N
LEU
230
A
N
LEU
121
A
O
ALA
278
A
O
ALA
169
A
N
CYS
205
A
N
CYS
96
A
O
LEU
295
A
O
LEU
186
A
O
GLU
294
A
O
GLU
185
A
N
ARG
255
A
N
ARG
146
A
N
CYS
256
A
N
CYS
147
A
O
VAL
259
A
O
VAL
150
A
N
THR
355
A
N
THR
246
A
O
LEU
434
A
O
LEU
325
A
N
GLU
433
A
N
GLU
324
A
O
THR
441
A
O
THR
332
A
O
PHE
383
A
O
PHE
274
A
N
SER
372
A
N
SER
263
A
N
LYS
373
A
N
LYS
264
A
O
ALA
413
A
O
ALA
304
1
A
CG2
THR
159
A
CG2
THR
50
1
Y
1
A
CG
PHE
170
A
CG
PHE
61
1
Y
1
A
CD1
PHE
170
A
CD1
PHE
61
1
Y
1
A
CD2
PHE
170
A
CD2
PHE
61
1
Y
1
A
CE1
PHE
170
A
CE1
PHE
61
1
Y
1
A
CE2
PHE
170
A
CE2
PHE
61
1
Y
1
A
CZ
PHE
170
A
CZ
PHE
61
1
Y
1
A
CG
LEU
444
A
CG
LEU
335
1
Y
1
A
CD1
LEU
444
A
CD1
LEU
335
1
Y
1
A
CD2
LEU
444
A
CD2
LEU
335
1
Y
1
A
SER
110
A
SER
1
1
Y
1
A
LEU
111
A
LEU
2
1
Y
1
A
THR
112
A
THR
3
1
Y
1
A
PRO
113
A
PRO
4
1
Y
1
A
LEU
114
A
LEU
5
1
Y
1
A
SER
115
A
SER
6
1
Y
1
A
ALA
116
A
ALA
7
1
Y
1
A
ILE
117
A
ILE
8
1
Y
1
A
THR
118
A
THR
9
1
Y
1
A
VAL
119
A
VAL
10
1
Y
1
A
ARG
120
A
ARG
11
1
Y
1
A
SER
121
A
SER
12
1
Y
1
A
MET
122
A
MET
13
1
Y
1
A
GLU
123
A
GLU
14
1
Y
1
A
GLY
124
A
GLY
15
1
Y
1
A
PRO
125
A
PRO
16
1
Y
1
A
PRO
126
A
PRO
17
1
Y
1
A
THR
127
A
THR
18
1
Y
1
A
VAL
128
A
VAL
19
1
Y
1
A
GLN
129
A
GLN
20
1
Y
1
A
GLN
130
A
GLN
21
1
Y
1
A
GLN
131
A
GLN
22
1
Y
1
A
SER
132
A
SER
23
1
Y
1
A
PRO
133
A
PRO
24
1
Y
1
A
SER
134
A
SER
25
1
Y
1
A
VAL
135
A
VAL
26
1
Y
1
A
ILE
136
A
ILE
27
1
Y
1
A
ARG
137
A
ARG
28
1
Y
1
A
GLN
138
A
GLN
29
1
Y
1
A
SER
139
A
SER
30
1
Y
1
A
PRO
140
A
PRO
31
1
Y
1
A
THR
141
A
THR
32
1
Y
1
A
GLN
142
A
GLN
33
1
Y
1
A
ARG
143
A
ARG
34
1
Y
1
A
ARG
144
A
ARG
35
1
Y
1
A
LYS
145
A
LYS
36
1
Y
1
A
THR
146
A
THR
37
1
Y
1
A
SER
147
A
SER
38
1
Y
1
A
THR
148
A
THR
39
1
Y
1
A
THR
149
A
THR
40
1
Y
1
A
SER
150
A
SER
41
1
Y
1
A
SER
151
A
SER
42
1
Y
1
A
THR
152
A
THR
43
1
Y
1
A
SER
153
A
SER
44
1
Y
1
A
ARG
154
A
ARG
45
1
Y
1
A
ALA
155
A
ALA
46
1
Y
1
A
PRO
156
A
PRO
47
1
Y
1
A
PRO
157
A
PRO
48
1
Y
1
A
PRO
158
A
PRO
49
1
Y
1
A
GLU
347
A
GLU
238
1
Y
1
A
MET
348
A
MET
239
1
Y
1
A
GLY
349
A
GLY
240
1
Y
1
A
LEU
350
A
LEU
241
1
Y
1
A
THR
351
A
THR
242
1
Y
1
A
THR
352
A
THR
243
1
Y
1
A
GLU
445
A
GLU
336
1
Y
1
A
ASP
446
A
ASP
337
1
Y
1
A
ASP
447
A
ASP
338
1
Y
1
A
ASP
448
A
ASP
339
1
Y
1
A
ASP
449
A
ASP
340
1
Y
1
A
SER
450
A
SER
341
1
Y
1
A
ASP
451
A
ASP
342
1
Y
1
A
SER
452
A
SER
343
1
Y
1
A
ASP
453
A
ASP
344
1
Y
1
A
SER
454
A
SER
345
1
Y
1
A
ASN
455
A
ASN
346
1
Y
1
A
ASP
456
A
ASP
347
1
Y
1
A
GLY
457
A
GLY
348
1
Y
1
A
SER
458
A
SER
349
1
Y
1
A
ARG
459
A
ARG
350
1
Y
1
A
SER
460
A
SER
351
1
Y
1
A
PRO
461
A
PRO
352
1
Y
1
A
GLU
462
A
GLU
353
1
Y
1
A
LYS
463
A
LYS
354
1
Y
1
A
GLY
464
A
GLY
355
1
Y
1
A
THR
465
A
THR
356
1
Y
1
A
LEU
466
A
LEU
357
1
Y
1
A
GLY
467
A
GLY
358
1
Y
1
A
GLU
468
A
GLU
359
1
Y
1
A
GLY
469
A
GLY
360
1
Y
1
A
ALA
470
A
ALA
361
1
Y
1
A
ALA
471
A
ALA
362
1
Y
1
A
ALA
472
A
ALA
363
1
Y
1
A
LEU
473
A
LEU
364
1
Y
1
A
GLU
474
A
GLU
365
1
Y
1
A
HIS
475
A
HIS
366
1
Y
1
A
HIS
476
A
HIS
367
1
Y
1
A
HIS
477
A
HIS
368
1
Y
1
A
HIS
478
A
HIS
369
1
Y
1
A
HIS
479
A
HIS
370
1
Y
1
A
HIS
480
A
HIS
371
1
Y
1
A
SER
164
-127.50
-152.74
1
A
SER
165
-157.92
-37.96
1
A
PHE
170
-143.74
-119.39
1
A
ALA
171
-171.17
111.86
1
A
VAL
172
78.24
83.68
1
A
ASN
217
-65.90
-72.13
1
A
LEU
218
-38.23
-38.94
1
A
SER
220
-56.30
-77.22
1
A
ASN
221
-22.05
142.07
1
A
LYS
225
-90.69
30.99
1
A
TYR
287
2.73
-79.50
1
A
GLN
289
-178.82
118.08
1
A
LEU
342
-49.77
-10.99
1
A
GLU
344
-63.86
99.70
1
A
ASP
345
-126.25
-158.34
1
A
LYS
373
178.96
162.37
1
A
LYS
378
-103.70
77.83
1
A
HIS
379
179.47
150.47
1
A
PRO
396
-63.16
91.37
1
A
GLN
404
58.37
4.96
1
A
ASN
424
-146.49
38.36
1
A
LYS
427
-43.90
-13.25
protein_rep.param
protein.top
dna-rna_rep.param
dna-rna.top
water_rep.param
water.top
ion.param
ion.top
141.48
66.641
19.83
36.740
0.000
0.000
-18.640
0.000
-18.100
BULK SOLVENT MODEL USED
0.259
0.010
0.211
2.600
34.02
672
13476
13193
5.100
97.900
1.00
1.00
RANDOM
1237748.000
0.000
1
RESTRAINED
THROUGHOUT
0.00
SAD
Engh & Huber
FLAT MODEL
40.547
0.350
0.440
0.340
40.000
0.520
0.470
2.600
34.02
66
2302
1
0
2235
0.008
1.500
24.500
1.040
3.580
1.500
5.480
2.000
5.570
2.000
7.480
2.500
0.369
0.037
0.351
2.760
99
1918
2017
6
4.900
91.800
51.900
2.6
34.02
3I2D
13901
13595
-0.5
0.073
1
22
97.8
0.434
2.6
2.69
2.6
1
89.2
refinement
Axel T. Brunger
axel.brunger@yale.edu
Fortran_77
http://cns-online.org/
CNS
package
1.2
data extraction
PDB
help@deposit.rcsb.org
June 11, 2008
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.005
data collection
ADSC
Quantum
data reduction
DENZO
data scaling
SCALEPACK
phasing
SHARP
Crystal Structure of S. Cerevisiae SUMO E3 Ligase SIZ1
1
N
N
2
N
N
3
N
N
A
SER
212
A
SER
103
HELX_P
A
ASN
221
A
ASN
112
1
1
10
A
SER
240
A
SER
131
HELX_P
A
GLU
244
A
GLU
135
5
2
5
A
PRO
272
A
PRO
163
HELX_P
A
LYS
276
A
LYS
167
5
3
5
A
THR
281
A
THR
172
HELX_P
A
LEU
284
A
LEU
175
5
4
4
A
THR
315
A
THR
206
HELX_P
A
GLN
325
A
GLN
216
1
5
11
A
ILE
330
A
ILE
221
HELX_P
A
GLU
344
A
GLU
235
1
6
15
A
ALA
385
A
ALA
276
HELX_P
A
ILE
395
A
ILE
286
1
7
11
A
ALA
408
A
ALA
299
HELX_P
A
GLU
410
A
GLU
301
5
8
3
A
SER
415
A
SER
306
HELX_P
A
GLN
423
A
GLN
314
1
9
9
metalc
2.118
A
ZN
1
B
ZN
ZN
1_555
A
CYS
377
A
SG
CYS
268
1_555
metalc
2.115
A
ZN
1
B
ZN
ZN
1_555
A
HIS
379
A
NE2
HIS
270
1_555
metalc
2.319
A
ZN
1
B
ZN
ZN
1_555
A
CYS
400
A
SG
CYS
291
1_555
metalc
2.294
A
ZN
1
B
ZN
ZN
1_555
A
CYS
403
A
SG
CYS
294
1_555
LIGASE
SUMO, SIGNAL TRANSDUCTION, REPLICATION, RING E3, PIAS, SIZ, UBIQUITIN, UBC9, Ligase, Metal-binding, Nucleus, Phosphoprotein, Ubl conjugation pathway, Zinc-finger
A
PHE
250
A
PHE
141
1
A
PRO
251
A
PRO
142
0.52
SIZ1_YEAST
UNP
1
112
Q04195
TPLSAITVRSMEGPPTVQQQSPSVIRQSPTQRRKTSTTSSTSRAPPPTNPDASSSSSSFAVPTIHFKESPFYKIQRLIPE
LVMNVEVTGGRGMCSAKFKLSKADYNLLSNPNSKHRLYLFSGMINPLGSRGNEPIQFPFPNELRCNNVQIKDNIRGFKSK
PGTAKPADLTPHLKPYTQQNNVELIYAFTTKEYKLFGYIVEMITPEQLLEKVLQHPKIIKQATLLYLKKTLREDEEMGLT
TTSTIMSLQCPISYTRMKYPSKSINCKHLQCFDALWFLHSQLQIPTWQCPVCQIDIALENLAISEFVDDILQNCQKNVEQ
VELTSDGKWTAILEDDDDSDSDSNDGSRSPEKGT
112
465
3I2D
112
465
Q04195
A
1
3
356
1
expression tag
SER
110
3I2D
A
Q04195
UNP
1
1
expression tag
LEU
111
3I2D
A
Q04195
UNP
2
1
expression tag
LEU
466
3I2D
A
Q04195
UNP
357
1
expression tag
GLY
467
3I2D
A
Q04195
UNP
358
1
expression tag
GLU
468
3I2D
A
Q04195
UNP
359
1
expression tag
GLY
469
3I2D
A
Q04195
UNP
360
1
expression tag
ALA
470
3I2D
A
Q04195
UNP
361
1
expression tag
ALA
471
3I2D
A
Q04195
UNP
362
1
expression tag
ALA
472
3I2D
A
Q04195
UNP
363
1
expression tag
LEU
473
3I2D
A
Q04195
UNP
364
1
expression tag
GLU
474
3I2D
A
Q04195
UNP
365
1
expression tag
HIS
475
3I2D
A
Q04195
UNP
366
1
expression tag
HIS
476
3I2D
A
Q04195
UNP
367
1
expression tag
HIS
477
3I2D
A
Q04195
UNP
368
1
expression tag
HIS
478
3I2D
A
Q04195
UNP
369
1
expression tag
HIS
479
3I2D
A
Q04195
UNP
370
1
expression tag
HIS
480
3I2D
A
Q04195
UNP
371
4
4
3
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
TYR
183
A
TYR
74
A
VAL
196
A
VAL
87
A
TYR
304
A
TYR
195
A
MET
313
A
MET
204
A
HIS
226
A
HIS
117
A
MET
234
A
MET
125
A
ALA
278
A
ALA
169
A
ASP
279
A
ASP
170
A
THR
199
A
THR
90
A
PHE
209
A
PHE
100
A
ASN
291
A
ASN
182
A
THR
300
A
THR
191
A
ASN
252
A
ASN
143
A
CYS
256
A
CYS
147
A
VAL
259
A
VAL
150
A
GLN
260
A
GLN
151
A
SER
354
A
SER
245
A
SER
358
A
SER
249
A
GLN
431
A
GLN
322
A
THR
435
A
THR
326
A
TRP
440
A
TRP
331
A
ALA
442
A
ALA
333
A
PHE
383
A
PHE
274
A
ASP
384
A
ASP
275
A
PRO
371
A
PRO
262
A
SER
374
A
SER
265
A
LEU
412
A
LEU
303
A
ILE
414
A
ILE
305
BINDING SITE FOR RESIDUE ZN A 1
A
ZN
1
Software
4
A
CYS
377
A
CYS
268
4
1_555
A
HIS
379
A
HIS
270
4
1_555
A
CYS
400
A
CYS
291
4
1_555
A
CYS
403
A
CYS
294
4
1_555
19
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