0.015760
0.000000
0.000000
0.000000
0.010737
0.000000
0.000000
0.000000
0.008883
0.00000
0.00000
0.00000
Friedmann, D.R.
Kovall, R.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
63.451
93.137
112.569
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C2 H6 O2
62.068
1,2-ETHANEDIOL
ETHYLENE GLYCOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
C5 H12 O5
152.146
Xylitol
D-Xylitol
D-saccharide
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
O
N
89
N
P
N
90
N
O
N
91
N
O
N
92
N
O
N
93
N
C
N
94
R
C
N
95
N
O
N
96
S
C
N
97
N
O
N
98
N
C
N
99
R
C
Y
100
N
N
Y
101
N
C
Y
102
N
N
Y
103
N
C
Y
104
N
C
N
105
N
N
Y
106
N
N
Y
107
N
C
Y
108
N
N
Y
109
N
C
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
O
N
125
N
P
N
126
N
O
N
127
N
O
N
128
N
O
N
129
N
C
N
130
R
C
N
131
N
O
N
132
S
C
N
133
N
O
N
134
N
C
N
135
R
C
N
136
N
N
N
137
N
C
N
138
N
O
N
139
N
N
N
140
N
C
N
141
N
N
N
142
N
C
N
143
N
C
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
P
N
160
N
O
N
161
N
O
N
162
N
O
N
163
N
C
N
164
R
C
N
165
N
O
N
166
S
C
N
167
N
O
N
168
N
C
N
169
R
C
Y
170
N
N
Y
171
N
C
Y
172
N
N
Y
173
N
C
N
174
N
C
N
175
N
O
N
176
N
N
N
177
N
C
N
178
N
N
N
179
N
N
Y
180
N
C
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
O
N
196
N
P
N
197
N
O
N
198
N
O
N
199
N
O
N
200
N
C
N
201
R
C
N
202
N
O
N
203
S
C
N
204
N
O
N
205
N
C
N
206
R
C
N
207
N
N
N
208
N
C
N
209
N
O
N
210
N
N
N
211
N
C
N
212
N
O
N
213
N
C
N
214
N
C
N
215
N
C
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
C
N
232
N
O
N
233
N
C
N
234
N
O
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
N
N
242
S
C
N
243
N
C
N
244
N
O
N
245
N
C
N
246
N
C
N
247
N
C
N
248
N
O
N
249
N
N
N
250
N
O
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
N
N
262
S
C
N
263
N
C
N
264
N
O
N
265
N
C
N
266
N
C
N
267
N
C
N
268
N
O
N
269
N
O
N
270
N
O
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
N
N
281
N
C
N
282
N
C
N
283
N
O
N
284
N
O
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
Y
295
N
C
Y
296
N
N
Y
297
N
C
Y
298
N
C
Y
299
N
N
N
300
N
O
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
N
N
315
S
C
N
316
N
C
N
317
N
O
N
318
S
C
N
319
N
C
N
320
N
C
N
321
N
C
N
322
N
O
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
N
N
337
S
C
N
338
N
C
N
339
N
O
N
340
N
C
N
341
N
C
N
342
N
C
N
343
N
C
N
344
N
O
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
N
N
359
S
C
N
360
N
C
N
361
N
O
N
362
N
C
N
363
N
C
N
364
N
C
N
365
N
C
N
366
N
N
N
367
N
O
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
N
N
384
S
C
N
385
N
C
N
386
N
O
N
387
N
C
N
388
N
C
N
389
N
S
N
390
N
C
N
391
N
O
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
N
N
404
S
C
N
405
N
C
N
406
N
O
N
407
N
C
Y
408
N
C
Y
409
N
C
Y
410
N
C
Y
411
N
C
Y
412
N
C
Y
413
N
C
N
414
N
O
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
N
N
427
S
C
N
428
N
C
N
429
N
O
N
430
N
C
N
431
N
C
N
432
N
C
N
433
N
O
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
N
N
444
S
C
N
445
N
C
N
446
N
O
N
447
N
C
N
448
N
O
N
449
N
O
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
N
N
458
S
C
N
459
N
C
N
460
N
O
N
461
R
C
N
462
N
O
N
463
N
C
N
464
N
O
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
H
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
N
N
475
S
C
N
476
N
C
N
477
N
O
N
478
N
C
Y
479
N
C
Y
480
N
C
Y
481
N
C
Y
482
N
N
Y
483
N
C
Y
484
N
C
Y
485
N
C
Y
486
N
C
Y
487
N
C
N
488
N
O
N
489
N
H
N
490
N
H
N
491
N
H
N
492
N
H
N
493
N
H
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
H
N
498
N
H
N
499
N
H
N
500
N
H
N
501
N
N
N
502
S
C
N
503
N
C
N
504
N
O
N
505
N
C
Y
506
N
C
Y
507
N
C
Y
508
N
C
Y
509
N
C
Y
510
N
C
Y
511
N
C
N
512
N
O
N
513
N
O
N
514
N
H
N
515
N
H
N
516
N
H
N
517
N
H
N
518
N
H
N
519
N
H
N
520
N
H
N
521
N
H
N
522
N
H
N
523
N
H
N
524
N
H
N
525
N
N
N
526
S
C
N
527
N
C
N
528
N
O
N
529
N
C
N
530
N
C
N
531
N
C
N
532
N
O
N
533
N
H
N
534
N
H
N
535
N
H
N
536
N
H
N
537
N
H
N
538
N
H
N
539
N
H
N
540
N
H
N
541
N
H
N
542
N
H
N
543
N
H
N
544
N
C
N
545
S
C
N
546
R
C
N
547
R
C
N
548
N
C
N
549
N
O
N
550
N
O
N
551
N
O
N
552
N
O
N
553
N
O
N
554
N
H
N
555
N
H
N
556
N
H
N
557
N
H
N
558
N
H
N
559
N
H
N
560
N
H
N
561
N
H
N
562
N
H
N
563
N
H
N
564
N
H
N
565
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
doub
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
Y
106
N
sing
Y
107
N
sing
Y
108
N
doub
N
109
N
sing
Y
110
N
sing
Y
111
N
sing
Y
112
N
doub
N
113
N
sing
Y
114
N
doub
N
115
N
sing
N
116
N
sing
Y
117
N
sing
Y
118
N
doub
N
119
N
sing
Y
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
Y
179
N
sing
Y
180
N
sing
Y
181
N
doub
N
182
N
sing
Y
183
N
sing
N
184
N
sing
Y
185
N
doub
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
doub
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
doub
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
doub
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
doub
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
doub
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
doub
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
doub
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
doub
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
doub
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
Y
298
N
sing
Y
299
N
doub
Y
300
N
doub
N
301
N
sing
Y
302
N
sing
N
303
N
sing
Y
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
doub
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
doub
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
doub
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
doub
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
doub
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
Y
406
N
doub
Y
407
N
sing
Y
408
N
sing
N
409
N
sing
Y
410
N
doub
N
411
N
sing
Y
412
N
doub
N
413
N
sing
Y
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
doub
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
doub
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
doub
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
doub
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
Y
475
N
doub
Y
476
N
sing
Y
477
N
sing
N
478
N
sing
Y
479
N
doub
Y
480
N
sing
Y
481
N
sing
N
482
N
sing
Y
483
N
sing
Y
484
N
doub
N
485
N
sing
Y
486
N
doub
N
487
N
sing
Y
488
N
sing
N
489
N
sing
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
sing
N
497
N
sing
N
498
N
doub
N
499
N
sing
N
500
N
sing
N
501
N
sing
N
502
N
sing
Y
503
N
doub
Y
504
N
sing
Y
505
N
sing
N
506
N
sing
Y
507
N
doub
N
508
N
sing
Y
509
N
doub
N
510
N
sing
Y
511
N
sing
N
512
N
sing
N
513
N
sing
N
514
N
sing
N
515
N
sing
N
516
N
sing
N
517
N
sing
N
518
N
sing
N
519
N
sing
N
520
N
sing
N
521
N
sing
N
522
N
doub
N
523
N
sing
N
524
N
sing
N
525
N
sing
N
526
N
sing
N
527
N
sing
N
528
N
sing
N
529
N
sing
N
530
N
sing
N
531
N
sing
N
532
N
sing
N
533
N
sing
N
534
N
sing
N
535
N
sing
N
536
N
sing
N
537
N
sing
N
538
N
sing
N
539
N
sing
N
540
N
sing
N
541
N
sing
N
542
N
sing
N
543
N
sing
N
544
N
sing
N
545
N
sing
N
546
N
sing
N
547
N
sing
N
548
N
sing
N
549
N
sing
N
550
N
sing
N
551
N
sing
N
552
N
sing
N
553
N
sing
N
554
N
sing
US
Protein Sci.
PRCIEI
0795
0961-8368
19
34
46
10.1002/pro.280
19866488
Thermodynamic and structural insights into CSL-DNA complexes.
2010
10.2210/pdb3iag/pdb
pdb_00003iag
100
1
CCD
2008-01-01
SINGLE WAVELENGTH
M
x-ray
1
1.0000
1.0
22-ID
APS
1.0000
SYNCHROTRON
APS BEAMLINE 22-ID
4527.974
5'-D(*AP*AP*TP*CP*TP*TP*TP*CP*AP*CP*AP*CP*GP*AP*T)-3'
1
syn
polymer
4648.045
5'-D(*TP*TP*AP*TP*CP*GP*TP*GP*TP*GP*AP*AP*AP*GP*A)-3'
1
syn
polymer
47869.641
Recombining binding protein suppressor of hairless
1
man
polymer
62.068
1,2-ETHANEDIOL
6
syn
non-polymer
152.146
Xylitol
1
man
non-polymer
18.015
water
158
nat
water
J kappa-recombination signal-binding protein, RBP-J kappa
no
no
(DA)(DA)(DT)(DC)(DT)(DT)(DT)(DC)(DA)(DC)(DA)(DC)(DG)(DA)(DT)
AATCTTTCACACGAT
A
polydeoxyribonucleotide
no
no
(DT)(DT)(DA)(DT)(DC)(DG)(DT)(DG)(DT)(DG)(DA)(DA)(DA)(DG)(DA)
TTATCGTGTGAAAGA
B
polydeoxyribonucleotide
no
no
PPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIG
NSDQEMQQLNLEGKNYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTK
VALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRK
VDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEQNKEMINDGASWTIISTDKAEYTFYEGMGP
VLAPVTPVPVVESLQLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPV
TLVRNDGVIYSTSLTFTYTPEP
PPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIG
NSDQEMQQLNLEGKNYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTK
VALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRK
VDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEQNKEMINDGASWTIISTDKAEYTFYEGMGP
VLAPVTPVPVVESLQLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPV
TLVRNDGVIYSTSLTFTYTPEP
C
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
mouse
sample
Igkjrb1, Igkrsbp, RBP-Jk, Rbpj, Rbpsuh
10090
Mus musculus
469008
Escherichia coli
BL21(DE3)
plasmid
pGEX6P-1
1
2.92
57.81
under oil microbatch
Magnesium Formate, PEG 3350, Xylitol, under oil microbatch, temperature 277K
277
2.906
1
20
A
3
B
30
3.839
A_DT3:DA30_B
1
-8.665
-0.115
0.029
-0.145
13.558
1
19
A
4
B
29
1.664
A_DC4:DG29_B
2
-17.418
-0.102
-0.733
-0.145
-1.856
1
20
A
5
B
28
0.436
A_DT5:DA28_B
3
-21.767
-0.139
0.188
0.043
0.202
1
20
A
6
B
27
6.034
A_DT6:DA27_B
4
-19.882
-0.222
-0.129
-0.194
-4.066
1
20
A
7
B
26
2.059
A_DT7:DA26_B
5
-18.223
0.138
-0.175
-0.255
-8.558
1
19
A
8
B
25
-0.350
A_DC8:DG25_B
6
-9.816
0.413
-0.045
-0.196
-11.086
1
20
A
9
B
24
1.959
A_DA9:DT24_B
7
-4.980
0.300
-0.006
-0.223
11.535
1
19
A
10
B
23
-1.565
A_DC10:DG23_B
8
-6.631
0.437
-0.397
-0.107
5.289
1
20
A
11
B
22
1.189
A_DA11:DT22_B
9
-17.342
0.089
0.035
-0.116
-3.098
1
19
A
12
B
21
-4.043
A_DC12:DG21_B
10
-10.231
0.204
0.317
-0.146
3.965
1
19
A
13
B
20
-0.295
A_DG13:DC20_B
11
-17.196
-0.107
0.002
-0.332
4.528
1
20
A
14
B
19
2.276
A_DA14:DT19_B
12
-16.475
-0.130
1.061
-0.214
7.854
1
20
A
15
B
18
1.730
A_DT15:DA18_B
13
-11.172
0.054
-0.445
-0.050
2.593
34.446
A
A
3
4
12.760
B
B
30
29
2.766
7.424
0.009
-0.144
AA_DT3DC4:DG29DA30_BB
1
8.537
-14.674
32.588
-1.217
1.105
3.336
38.039
A
A
4
5
14.884
B
B
29
28
3.526
9.594
-0.021
-0.303
AA_DC4DT5:DA28DG29_BB
2
-3.085
4.786
36.728
-1.768
-0.387
2.935
36.281
A
A
5
6
7.421
B
B
28
27
2.974
4.601
0.148
-0.132
AA_DT5DT6:DA27DA28_BB
3
3.892
-6.278
35.794
-0.798
0.258
3.250
37.845
A
A
6
7
3.271
B
B
27
26
3.259
2.120
-0.052
-0.075
AA_DT6DT7:DA26DA27_BB
4
0.428
-0.661
37.785
-0.386
0.135
3.336
41.587
A
A
7
8
1.245
B
B
26
25
3.336
0.884
0.302
-0.059
AA_DT7DC8:DG25DA26_BB
5
0.242
-0.340
41.577
-0.178
-0.399
3.193
32.729
A
A
8
9
10.329
B
B
25
24
3.282
5.790
0.150
-0.194
AA_DC8DA9:DT24DG25_BB
6
-1.140
2.034
32.207
-1.341
-0.463
2.695
28.503
A
A
9
10
-4.680
B
B
24
23
2.759
-2.291
-0.186
-0.171
AA_DA9DC10:DG23DT24_BB
7
4.817
-9.840
28.009
0.092
1.303
3.467
41.235
A
A
10
11
11.622
B
B
23
22
3.440
8.129
-0.180
0.445
AA_DC10DA11:DT22DG23_BB
8
-2.983
4.265
40.354
-0.303
-0.088
3.457
35.446
A
A
11
12
6.489
B
B
22
21
3.462
3.929
-0.720
-0.483
AA_DA11DC12:DG21DT22_BB
9
-5.256
8.680
34.852
-1.408
0.359
3.221
29.274
A
A
12
13
23.598
B
B
21
20
3.219
11.596
0.585
0.559
AA_DC12DG13:DC20DG21_BB
10
2.591
-5.273
26.802
-1.478
-0.579
2.741
42.538
A
A
13
14
0.848
B
B
20
19
2.886
0.610
0.302
-0.228
AA_DG13DA14:DT19DC20_BB
11
-10.005
13.910
41.393
-0.368
-1.299
2.883
34.781
A
A
14
15
7.328
B
B
19
18
3.263
4.309
-0.447
-0.790
AA_DA14DT15:DA18DT19_BB
12
10.145
-17.251
33.040
-1.956
2.242
software
chem_comp
entity
pdbx_entity_nonpoly
struct_site
struct_site_gen
chem_comp
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Refinement description
Derived calculations
Structure summary
Data collection
Database references
Structure summary
1
0
2009-11-10
1
1
2011-07-13
1
2
2017-11-01
1
3
2020-07-29
1
4
2024-02-21
_chem_comp.name
_chem_comp.type
_entity.pdbx_description
_pdbx_entity_nonpoly.name
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
RCSB
Y
RCSB
2009-07-13
REL
REL
EDO
1,2-ETHANEDIOL
XYL
Xylitol
HOH
water
synthesized
sample
synthesized
sample
EDO
5
4
EDO
EDO
16
A
XYL
1
5
XYL
XYL
17
A
EDO
1
4
EDO
EDO
1
C
EDO
2
4
EDO
EDO
2
C
EDO
3
4
EDO
EDO
3
C
EDO
4
4
EDO
EDO
4
C
EDO
6
4
EDO
EDO
6
C
HOH
35
6
HOH
HOH
35
A
HOH
84
6
HOH
HOH
84
A
HOH
42
6
HOH
HOH
42
B
HOH
155
6
HOH
HOH
155
B
HOH
158
6
HOH
HOH
158
B
HOH
5
6
HOH
HOH
5
C
HOH
7
6
HOH
HOH
7
C
HOH
8
6
HOH
HOH
8
C
HOH
9
6
HOH
HOH
9
C
HOH
10
6
HOH
HOH
10
C
HOH
11
6
HOH
HOH
11
C
HOH
12
6
HOH
HOH
12
C
HOH
13
6
HOH
HOH
13
C
HOH
14
6
HOH
HOH
14
C
HOH
15
6
HOH
HOH
15
C
HOH
16
6
HOH
HOH
16
C
HOH
17
6
HOH
HOH
17
C
HOH
18
6
HOH
HOH
18
C
HOH
19
6
HOH
HOH
19
C
HOH
20
6
HOH
HOH
20
C
HOH
21
6
HOH
HOH
21
C
HOH
22
6
HOH
HOH
22
C
HOH
23
6
HOH
HOH
23
C
HOH
24
6
HOH
HOH
24
C
HOH
25
6
HOH
HOH
25
C
HOH
26
6
HOH
HOH
26
C
HOH
27
6
HOH
HOH
27
C
HOH
28
6
HOH
HOH
28
C
HOH
29
6
HOH
HOH
29
C
HOH
30
6
HOH
HOH
30
C
HOH
31
6
HOH
HOH
31
C
HOH
32
6
HOH
HOH
32
C
HOH
33
6
HOH
HOH
33
C
HOH
34
6
HOH
HOH
34
C
HOH
36
6
HOH
HOH
36
C
HOH
37
6
HOH
HOH
37
C
HOH
38
6
HOH
HOH
38
C
HOH
39
6
HOH
HOH
39
C
HOH
40
6
HOH
HOH
40
C
HOH
41
6
HOH
HOH
41
C
HOH
43
6
HOH
HOH
43
C
HOH
44
6
HOH
HOH
44
C
HOH
45
6
HOH
HOH
45
C
HOH
46
6
HOH
HOH
46
C
HOH
47
6
HOH
HOH
47
C
HOH
48
6
HOH
HOH
48
C
HOH
49
6
HOH
HOH
49
C
HOH
50
6
HOH
HOH
50
C
HOH
51
6
HOH
HOH
51
C
HOH
52
6
HOH
HOH
52
C
HOH
1
6
HOH
HOH
475
C
HOH
2
6
HOH
HOH
476
C
HOH
3
6
HOH
HOH
477
C
HOH
4
6
HOH
HOH
478
C
HOH
6
6
HOH
HOH
479
C
HOH
53
6
HOH
HOH
480
C
HOH
54
6
HOH
HOH
481
C
HOH
55
6
HOH
HOH
482
C
HOH
56
6
HOH
HOH
483
C
HOH
57
6
HOH
HOH
484
C
HOH
58
6
HOH
HOH
485
C
HOH
59
6
HOH
HOH
486
C
HOH
60
6
HOH
HOH
487
C
HOH
61
6
HOH
HOH
488
C
HOH
62
6
HOH
HOH
489
C
HOH
63
6
HOH
HOH
490
C
HOH
64
6
HOH
HOH
491
C
HOH
65
6
HOH
HOH
492
C
HOH
66
6
HOH
HOH
493
C
HOH
67
6
HOH
HOH
494
C
HOH
68
6
HOH
HOH
495
C
HOH
69
6
HOH
HOH
496
C
HOH
70
6
HOH
HOH
497
C
HOH
71
6
HOH
HOH
498
C
HOH
72
6
HOH
HOH
499
C
HOH
73
6
HOH
HOH
500
C
HOH
74
6
HOH
HOH
501
C
HOH
75
6
HOH
HOH
502
C
HOH
76
6
HOH
HOH
503
C
HOH
77
6
HOH
HOH
504
C
HOH
78
6
HOH
HOH
505
C
HOH
79
6
HOH
HOH
506
C
HOH
80
6
HOH
HOH
507
C
HOH
81
6
HOH
HOH
508
C
HOH
82
6
HOH
HOH
509
C
HOH
83
6
HOH
HOH
510
C
HOH
85
6
HOH
HOH
511
C
HOH
86
6
HOH
HOH
512
C
HOH
87
6
HOH
HOH
513
C
HOH
88
6
HOH
HOH
514
C
HOH
89
6
HOH
HOH
515
C
HOH
90
6
HOH
HOH
516
C
HOH
91
6
HOH
HOH
517
C
HOH
92
6
HOH
HOH
518
C
HOH
93
6
HOH
HOH
519
C
HOH
94
6
HOH
HOH
520
C
HOH
95
6
HOH
HOH
521
C
HOH
96
6
HOH
HOH
522
C
HOH
97
6
HOH
HOH
523
C
HOH
98
6
HOH
HOH
524
C
HOH
99
6
HOH
HOH
525
C
HOH
100
6
HOH
HOH
526
C
HOH
101
6
HOH
HOH
527
C
HOH
102
6
HOH
HOH
528
C
HOH
103
6
HOH
HOH
529
C
HOH
104
6
HOH
HOH
530
C
HOH
105
6
HOH
HOH
531
C
HOH
106
6
HOH
HOH
532
C
HOH
107
6
HOH
HOH
533
C
HOH
108
6
HOH
HOH
534
C
HOH
109
6
HOH
HOH
535
C
HOH
110
6
HOH
HOH
536
C
HOH
111
6
HOH
HOH
537
C
HOH
112
6
HOH
HOH
538
C
HOH
113
6
HOH
HOH
539
C
HOH
114
6
HOH
HOH
540
C
HOH
115
6
HOH
HOH
541
C
HOH
116
6
HOH
HOH
542
C
HOH
117
6
HOH
HOH
543
C
HOH
118
6
HOH
HOH
544
C
HOH
119
6
HOH
HOH
545
C
HOH
120
6
HOH
HOH
546
C
HOH
121
6
HOH
HOH
547
C
HOH
122
6
HOH
HOH
548
C
HOH
123
6
HOH
HOH
549
C
HOH
124
6
HOH
HOH
550
C
HOH
125
6
HOH
HOH
551
C
HOH
126
6
HOH
HOH
552
C
HOH
127
6
HOH
HOH
553
C
HOH
128
6
HOH
HOH
554
C
HOH
129
6
HOH
HOH
555
C
HOH
130
6
HOH
HOH
556
C
HOH
131
6
HOH
HOH
557
C
HOH
132
6
HOH
HOH
558
C
HOH
133
6
HOH
HOH
559
C
HOH
134
6
HOH
HOH
560
C
HOH
135
6
HOH
HOH
561
C
HOH
136
6
HOH
HOH
562
C
HOH
137
6
HOH
HOH
563
C
HOH
138
6
HOH
HOH
564
C
HOH
139
6
HOH
HOH
565
C
HOH
140
6
HOH
HOH
566
C
HOH
141
6
HOH
HOH
567
C
HOH
142
6
HOH
HOH
568
C
HOH
143
6
HOH
HOH
569
C
HOH
144
6
HOH
HOH
570
C
HOH
145
6
HOH
HOH
571
C
HOH
146
6
HOH
HOH
572
C
HOH
147
6
HOH
HOH
573
C
HOH
148
6
HOH
HOH
574
C
HOH
149
6
HOH
HOH
575
C
HOH
150
6
HOH
HOH
576
C
HOH
151
6
HOH
HOH
577
C
HOH
152
6
HOH
HOH
578
C
HOH
153
6
HOH
HOH
579
C
HOH
154
6
HOH
HOH
580
C
HOH
156
6
HOH
HOH
581
C
HOH
157
6
HOH
HOH
582
C
DA
1
n
1
DA
1
A
DA
2
n
2
DA
2
A
DT
3
n
3
DT
3
A
DC
4
n
4
DC
4
A
DT
5
n
5
DT
5
A
DT
6
n
6
DT
6
A
DT
7
n
7
DT
7
A
DC
8
n
8
DC
8
A
DA
9
n
9
DA
9
A
DC
10
n
10
DC
10
A
DA
11
n
11
DA
11
A
DC
12
n
12
DC
12
A
DG
13
n
13
DG
13
A
DA
14
n
14
DA
14
A
DT
15
n
15
DT
15
A
DT
16
n
1
DT
16
B
DT
17
n
2
DT
17
B
DA
18
n
3
DA
18
B
DT
19
n
4
DT
19
B
DC
20
n
5
DC
20
B
DG
21
n
6
DG
21
B
DT
22
n
7
DT
22
B
DG
23
n
8
DG
23
B
DT
24
n
9
DT
24
B
DG
25
n
10
DG
25
B
DA
26
n
11
DA
26
B
DA
27
n
12
DA
27
B
DA
28
n
13
DA
28
B
DG
29
n
14
DG
29
B
DA
30
n
15
DA
30
B
PRO
53
n
1
PRO
53
C
PRO
54
n
2
PRO
54
C
LYS
55
n
3
LYS
55
C
ARG
56
n
4
ARG
56
C
LEU
57
n
5
LEU
57
C
THR
58
n
6
THR
58
C
ARG
59
n
7
ARG
59
C
GLU
60
n
8
GLU
60
C
ALA
61
n
9
ALA
61
C
MET
62
n
10
MET
62
C
ARG
63
n
11
ARG
63
C
ASN
64
n
12
ASN
64
C
TYR
65
n
13
TYR
65
C
LEU
66
n
14
LEU
66
C
LYS
67
n
15
LYS
67
C
GLU
68
n
16
GLU
68
C
ARG
69
n
17
ARG
69
C
GLY
70
n
18
GLY
70
C
ASP
71
n
19
ASP
71
C
GLN
72
n
20
GLN
72
C
THR
73
n
21
THR
73
C
VAL
74
n
22
VAL
74
C
LEU
75
n
23
LEU
75
C
ILE
76
n
24
ILE
76
C
LEU
77
n
25
LEU
77
C
HIS
78
n
26
HIS
78
C
ALA
79
n
27
ALA
79
C
LYS
80
n
28
LYS
80
C
VAL
81
n
29
VAL
81
C
ALA
82
n
30
ALA
82
C
GLN
83
n
31
GLN
83
C
LYS
84
n
32
LYS
84
C
SER
85
n
33
SER
85
C
TYR
86
n
34
TYR
86
C
GLY
87
n
35
GLY
87
C
ASN
88
n
36
ASN
88
C
GLU
89
n
37
GLU
89
C
LYS
90
n
38
LYS
90
C
ARG
91
n
39
ARG
91
C
PHE
92
n
40
PHE
92
C
PHE
93
n
41
PHE
93
C
CYS
94
n
42
CYS
94
C
PRO
95
n
43
PRO
95
C
PRO
96
n
44
PRO
96
C
PRO
97
n
45
PRO
97
C
CYS
98
n
46
CYS
98
C
VAL
99
n
47
VAL
99
C
TYR
100
n
48
TYR
100
C
LEU
101
n
49
LEU
101
C
MET
102
n
50
MET
102
C
GLY
103
n
51
GLY
103
C
SER
104
n
52
SER
104
C
GLY
105
n
53
GLY
105
C
TRP
106
n
54
TRP
106
C
LYS
107
n
55
LYS
107
C
LYS
108
n
56
LYS
108
C
LYS
109
n
57
LYS
109
C
LYS
110
n
58
LYS
110
C
GLU
111
n
59
GLU
111
C
GLN
112
n
60
GLN
112
C
MET
113
n
61
MET
113
C
GLU
114
n
62
GLU
114
C
ARG
115
n
63
ARG
115
C
ASP
116
n
64
ASP
116
C
GLY
117
n
65
GLY
117
C
CYS
118
n
66
CYS
118
C
SER
119
n
67
SER
119
C
GLU
120
n
68
GLU
120
C
GLN
121
n
69
GLN
121
C
GLU
122
n
70
GLU
122
C
SER
123
n
71
SER
123
C
GLN
124
n
72
GLN
124
C
PRO
125
n
73
PRO
125
C
CYS
126
n
74
CYS
126
C
ALA
127
n
75
ALA
127
C
PHE
128
n
76
PHE
128
C
ILE
129
n
77
ILE
129
C
GLY
130
n
78
GLY
130
C
ILE
131
n
79
ILE
131
C
GLY
132
n
80
GLY
132
C
ASN
133
n
81
ASN
133
C
SER
134
n
82
SER
134
C
ASP
135
n
83
ASP
135
C
GLN
136
n
84
GLN
136
C
GLU
137
n
85
GLU
137
C
MET
138
n
86
MET
138
C
GLN
139
n
87
GLN
139
C
GLN
140
n
88
GLN
140
C
LEU
141
n
89
LEU
141
C
ASN
142
n
90
ASN
142
C
LEU
143
n
91
LEU
143
C
GLU
144
n
92
GLU
144
C
GLY
145
n
93
GLY
145
C
LYS
146
n
94
LYS
146
C
ASN
147
n
95
ASN
147
C
TYR
148
n
96
TYR
148
C
CYS
149
n
97
CYS
149
C
THR
150
n
98
THR
150
C
ALA
151
n
99
ALA
151
C
LYS
152
n
100
LYS
152
C
THR
153
n
101
THR
153
C
LEU
154
n
102
LEU
154
C
TYR
155
n
103
TYR
155
C
ILE
156
n
104
ILE
156
C
SER
157
n
105
SER
157
C
ASP
158
n
106
ASP
158
C
SER
159
n
107
SER
159
C
ASP
160
n
108
ASP
160
C
LYS
161
n
109
LYS
161
C
ARG
162
n
110
ARG
162
C
LYS
163
n
111
LYS
163
C
HIS
164
n
112
HIS
164
C
PHE
165
n
113
PHE
165
C
MET
166
n
114
MET
166
C
LEU
167
n
115
LEU
167
C
SER
168
n
116
SER
168
C
VAL
169
n
117
VAL
169
C
LYS
170
n
118
LYS
170
C
MET
171
n
119
MET
171
C
PHE
172
n
120
PHE
172
C
TYR
173
n
121
TYR
173
C
GLY
174
n
122
GLY
174
C
ASN
175
n
123
ASN
175
C
SER
176
n
124
SER
176
C
ASP
177
n
125
ASP
177
C
ASP
178
n
126
ASP
178
C
ILE
179
n
127
ILE
179
C
GLY
180
n
128
GLY
180
C
VAL
181
n
129
VAL
181
C
PHE
182
n
130
PHE
182
C
LEU
183
n
131
LEU
183
C
SER
184
n
132
SER
184
C
LYS
185
n
133
LYS
185
C
ARG
186
n
134
ARG
186
C
ILE
187
n
135
ILE
187
C
LYS
188
n
136
LYS
188
C
VAL
189
n
137
VAL
189
C
ILE
190
n
138
ILE
190
C
SER
191
n
139
SER
191
C
LYS
192
n
140
LYS
192
C
PRO
193
n
141
PRO
193
C
SER
194
n
142
SER
194
C
LYS
195
n
143
LYS
195
C
LYS
196
n
144
LYS
196
C
LYS
197
n
145
LYS
197
C
GLN
198
n
146
GLN
198
C
SER
199
n
147
SER
199
C
LEU
200
n
148
LEU
200
C
LYS
201
n
149
LYS
201
C
ASN
202
n
150
ASN
202
C
ALA
203
n
151
ALA
203
C
ASP
204
n
152
ASP
204
C
LEU
205
n
153
LEU
205
C
CYS
206
n
154
CYS
206
C
ILE
207
n
155
ILE
207
C
ALA
208
n
156
ALA
208
C
SER
209
n
157
SER
209
C
GLY
210
n
158
GLY
210
C
THR
211
n
159
THR
211
C
LYS
212
n
160
LYS
212
C
VAL
213
n
161
VAL
213
C
ALA
214
n
162
ALA
214
C
LEU
215
n
163
LEU
215
C
PHE
216
n
164
PHE
216
C
ASN
217
n
165
ASN
217
C
ARG
218
n
166
ARG
218
C
LEU
219
n
167
LEU
219
C
ARG
220
n
168
ARG
220
C
SER
221
n
169
SER
221
C
GLN
222
n
170
GLN
222
C
THR
223
n
171
THR
223
C
VAL
224
n
172
VAL
224
C
SER
225
n
173
SER
225
C
THR
226
n
174
THR
226
C
ARG
227
n
175
ARG
227
C
TYR
228
n
176
TYR
228
C
LEU
229
n
177
LEU
229
C
HIS
230
n
178
HIS
230
C
VAL
231
n
179
VAL
231
C
GLU
232
n
180
GLU
232
C
GLY
233
n
181
GLY
233
C
GLY
234
n
182
GLY
234
C
ASN
235
n
183
ASN
235
C
PHE
236
n
184
PHE
236
C
HIS
237
n
185
HIS
237
C
ALA
238
n
186
ALA
238
C
SER
239
n
187
SER
239
C
SER
240
n
188
SER
240
C
GLN
241
n
189
GLN
241
C
GLN
242
n
190
GLN
242
C
TRP
243
n
191
TRP
243
C
GLY
244
n
192
GLY
244
C
ALA
245
n
193
ALA
245
C
PHE
246
n
194
PHE
246
C
TYR
247
n
195
TYR
247
C
ILE
248
n
196
ILE
248
C
HIS
249
n
197
HIS
249
C
LEU
250
n
198
LEU
250
C
LEU
251
n
199
LEU
251
C
ASP
252
n
200
ASP
252
C
ASP
253
n
201
ASP
253
C
ASP
254
n
202
ASP
254
C
GLU
255
n
203
GLU
255
C
SER
256
n
204
SER
256
C
GLU
257
n
205
GLU
257
C
GLY
258
n
206
GLY
258
C
GLU
259
n
207
GLU
259
C
GLU
260
n
208
GLU
260
C
PHE
261
n
209
PHE
261
C
THR
262
n
210
THR
262
C
VAL
263
n
211
VAL
263
C
ARG
264
n
212
ARG
264
C
ASP
265
n
213
ASP
265
C
GLY
266
n
214
GLY
266
C
TYR
267
n
215
TYR
267
C
ILE
268
n
216
ILE
268
C
HIS
269
n
217
HIS
269
C
TYR
270
n
218
TYR
270
C
GLY
271
n
219
GLY
271
C
GLN
272
n
220
GLN
272
C
THR
273
n
221
THR
273
C
VAL
274
n
222
VAL
274
C
LYS
275
n
223
LYS
275
C
LEU
276
n
224
LEU
276
C
VAL
277
n
225
VAL
277
C
CYS
278
n
226
CYS
278
C
SER
279
n
227
SER
279
C
VAL
280
n
228
VAL
280
C
THR
281
n
229
THR
281
C
GLY
282
n
230
GLY
282
C
MET
283
n
231
MET
283
C
ALA
284
n
232
ALA
284
C
LEU
285
n
233
LEU
285
C
PRO
286
n
234
PRO
286
C
ARG
287
n
235
ARG
287
C
LEU
288
n
236
LEU
288
C
ILE
289
n
237
ILE
289
C
ILE
290
n
238
ILE
290
C
ARG
291
n
239
ARG
291
C
LYS
292
n
240
LYS
292
C
VAL
293
n
241
VAL
293
C
ASP
294
n
242
ASP
294
C
LYS
295
n
243
LYS
295
C
GLN
296
n
244
GLN
296
C
THR
297
n
245
THR
297
C
ALA
298
n
246
ALA
298
C
LEU
299
n
247
LEU
299
C
LEU
300
n
248
LEU
300
C
ASP
301
n
249
ASP
301
C
ALA
302
n
250
ALA
302
C
ASP
303
n
251
ASP
303
C
ASP
304
n
252
ASP
304
C
PRO
305
n
253
PRO
305
C
VAL
306
n
254
VAL
306
C
SER
307
n
255
SER
307
C
GLN
308
n
256
GLN
308
C
LEU
309
n
257
LEU
309
C
HIS
310
n
258
HIS
310
C
LYS
311
n
259
LYS
311
C
CYS
312
n
260
CYS
312
C
ALA
313
n
261
ALA
313
C
PHE
314
n
262
PHE
314
C
TYR
315
n
263
TYR
315
C
LEU
316
n
264
LEU
316
C
LYS
317
n
265
LYS
317
C
ASP
318
n
266
ASP
318
C
THR
319
n
267
THR
319
C
GLU
320
n
268
GLU
320
C
ARG
321
n
269
ARG
321
C
MET
322
n
270
MET
322
C
TYR
323
n
271
TYR
323
C
LEU
324
n
272
LEU
324
C
CYS
325
n
273
CYS
325
C
LEU
326
n
274
LEU
326
C
SER
327
n
275
SER
327
C
GLN
328
n
276
GLN
328
C
GLU
329
n
277
GLU
329
C
ARG
330
n
278
ARG
330
C
ILE
331
n
279
ILE
331
C
ILE
332
n
280
ILE
332
C
GLN
333
n
281
GLN
333
C
PHE
334
n
282
PHE
334
C
GLN
335
n
283
GLN
335
C
ALA
336
n
284
ALA
336
C
THR
337
n
285
THR
337
C
PRO
338
n
286
PRO
338
C
CYS
339
n
287
CYS
339
C
PRO
340
n
288
PRO
340
C
LYS
341
n
289
LYS
341
C
GLU
342
n
290
GLU
342
C
GLN
343
n
291
GLN
343
C
ASN
344
n
292
ASN
344
C
LYS
345
n
293
LYS
345
C
GLU
346
n
294
GLU
346
C
MET
347
n
295
MET
347
C
ILE
348
n
296
ILE
348
C
ASN
349
n
297
ASN
349
C
ASP
350
n
298
ASP
350
C
GLY
351
n
299
GLY
351
C
ALA
352
n
300
ALA
352
C
SER
353
n
301
SER
353
C
TRP
354
n
302
TRP
354
C
THR
355
n
303
THR
355
C
ILE
356
n
304
ILE
356
C
ILE
357
n
305
ILE
357
C
SER
358
n
306
SER
358
C
THR
359
n
307
THR
359
C
ASP
360
n
308
ASP
360
C
LYS
361
n
309
LYS
361
C
ALA
362
n
310
ALA
362
C
GLU
363
n
311
GLU
363
C
TYR
364
n
312
TYR
364
C
THR
365
n
313
THR
365
C
PHE
366
n
314
PHE
366
C
TYR
367
n
315
TYR
367
C
GLU
368
n
316
GLU
368
C
GLY
369
n
317
GLY
369
C
MET
370
n
318
MET
370
C
GLY
371
n
319
GLY
371
C
PRO
372
n
320
PRO
372
C
VAL
373
n
321
VAL
373
C
LEU
374
n
322
LEU
374
C
ALA
375
n
323
ALA
375
C
PRO
376
n
324
PRO
376
C
VAL
377
n
325
VAL
377
C
THR
378
n
326
THR
378
C
PRO
379
n
327
PRO
379
C
VAL
380
n
328
VAL
380
C
PRO
381
n
329
PRO
381
C
VAL
382
n
330
VAL
382
C
VAL
383
n
331
VAL
383
C
GLU
384
n
332
GLU
384
C
SER
385
n
333
SER
385
C
LEU
386
n
334
LEU
386
C
GLN
387
n
335
GLN
387
C
LEU
388
n
336
LEU
388
C
ASN
389
n
337
ASN
389
C
GLY
390
n
338
GLY
390
C
GLY
391
n
339
GLY
391
C
GLY
392
n
340
GLY
392
C
ASP
393
n
341
ASP
393
C
VAL
394
n
342
VAL
394
C
ALA
395
n
343
ALA
395
C
MET
396
n
344
MET
396
C
LEU
397
n
345
LEU
397
C
GLU
398
n
346
GLU
398
C
LEU
399
n
347
LEU
399
C
THR
400
n
348
THR
400
C
GLY
401
n
349
GLY
401
C
GLN
402
n
350
GLN
402
C
ASN
403
n
351
ASN
403
C
PHE
404
n
352
PHE
404
C
THR
405
n
353
THR
405
C
PRO
406
n
354
PRO
406
C
ASN
407
n
355
ASN
407
C
LEU
408
n
356
LEU
408
C
ARG
409
n
357
ARG
409
C
VAL
410
n
358
VAL
410
C
TRP
411
n
359
TRP
411
C
PHE
412
n
360
PHE
412
C
GLY
413
n
361
GLY
413
C
ASP
414
n
362
ASP
414
C
VAL
415
n
363
VAL
415
C
GLU
416
n
364
GLU
416
C
ALA
417
n
365
ALA
417
C
GLU
418
n
366
GLU
418
C
THR
419
n
367
THR
419
C
MET
420
n
368
MET
420
C
TYR
421
n
369
TYR
421
C
ARG
422
n
370
ARG
422
C
CYS
423
n
371
CYS
423
C
GLY
424
n
372
GLY
424
C
GLU
425
n
373
GLU
425
C
SER
426
n
374
SER
426
C
MET
427
n
375
MET
427
C
LEU
428
n
376
LEU
428
C
CYS
429
n
377
CYS
429
C
VAL
430
n
378
VAL
430
C
VAL
431
n
379
VAL
431
C
PRO
432
n
380
PRO
432
C
ASP
433
n
381
ASP
433
C
ILE
434
n
382
ILE
434
C
SER
435
n
383
SER
435
C
ALA
436
n
384
ALA
436
C
PHE
437
n
385
PHE
437
C
ARG
438
n
386
ARG
438
C
GLU
439
n
387
GLU
439
C
GLY
440
n
388
GLY
440
C
TRP
441
n
389
TRP
441
C
ARG
442
n
390
ARG
442
C
TRP
443
n
391
TRP
443
C
VAL
444
n
392
VAL
444
C
ARG
445
n
393
ARG
445
C
GLN
446
n
394
GLN
446
C
PRO
447
n
395
PRO
447
C
VAL
448
n
396
VAL
448
C
GLN
449
n
397
GLN
449
C
VAL
450
n
398
VAL
450
C
PRO
451
n
399
PRO
451
C
VAL
452
n
400
VAL
452
C
THR
453
n
401
THR
453
C
LEU
454
n
402
LEU
454
C
VAL
455
n
403
VAL
455
C
ARG
456
n
404
ARG
456
C
ASN
457
n
405
ASN
457
C
ASP
458
n
406
ASP
458
C
GLY
459
n
407
GLY
459
C
VAL
460
n
408
VAL
460
C
ILE
461
n
409
ILE
461
C
TYR
462
n
410
TYR
462
C
SER
463
n
411
SER
463
C
THR
464
n
412
THR
464
C
SER
465
n
413
SER
465
C
LEU
466
n
414
LEU
466
C
THR
467
n
415
THR
467
C
PHE
468
n
416
PHE
468
C
THR
469
n
417
THR
469
C
TYR
470
n
418
TYR
470
C
THR
471
n
419
THR
471
C
PRO
472
n
420
PRO
472
C
GLU
473
n
421
GLU
473
C
PRO
474
n
422
PRO
474
C
author_and_software_defined_assembly
PISA
3
trimeric
4640
2
25840
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
C
O
CYS
149
C
O
CYS
97
C
N
VAL
99
C
N
VAL
47
C
O
CYS
98
C
O
CYS
46
C
N
LEU
77
C
N
LEU
25
C
N
HIS
78
C
N
HIS
26
C
O
ASP
360
C
O
ASP
308
C
O
TRP
354
C
O
TRP
302
C
N
CYS
312
C
N
CYS
260
C
O
TYR
315
C
O
TYR
263
C
N
ILE
289
C
N
ILE
237
C
N
LYS
292
C
N
LYS
240
C
O
LEU
299
C
O
LEU
247
C
N
ALA
298
C
N
ALA
246
C
O
GLU
346
C
O
GLU
294
C
O
MET
347
C
O
MET
295
C
N
THR
337
C
N
THR
285
C
N
THR
337
C
N
THR
285
C
O
MET
347
C
O
MET
295
C
O
GLU
346
C
O
GLU
294
C
N
ALA
298
C
N
ALA
246
C
O
LEU
299
C
O
LEU
247
C
N
LYS
292
C
N
LYS
240
C
O
LEU
288
C
O
LEU
236
C
N
VAL
274
C
N
VAL
222
C
O
VAL
277
C
O
VAL
225
C
N
TYR
247
C
N
TYR
195
C
O
PHE
246
C
O
PHE
194
C
N
VAL
213
C
N
VAL
161
C
N
PHE
216
C
N
PHE
164
C
O
THR
355
C
O
THR
303
C
N
TYR
367
C
N
TYR
315
C
O
ILE
461
C
O
ILE
409
C
O
TYR
462
C
O
TYR
410
C
N
LEU
454
C
N
LEU
402
C
O
THR
453
C
O
THR
401
C
N
TRP
411
C
N
TRP
359
C
N
PHE
412
C
N
PHE
360
C
O
VAL
415
C
O
VAL
363
C
O
HIS
237
C
O
HIS
185
C
N
HIS
230
C
N
HIS
178
C
O
ARG
227
C
O
ARG
175
C
N
ASN
217
C
N
ASN
165
C
N
PHE
216
C
N
PHE
164
C
O
THR
355
C
O
THR
303
C
N
TYR
367
C
N
TYR
315
C
O
ILE
461
C
O
ILE
409
C
O
TYR
462
C
O
TYR
410
C
N
LEU
454
C
N
LEU
402
C
O
THR
453
C
O
THR
401
C
N
TRP
411
C
N
TRP
359
C
N
PHE
412
C
N
PHE
360
C
O
VAL
415
C
O
VAL
363
C
N
ALA
82
C
N
ALA
30
C
O
ILE
190
C
O
ILE
138
C
O
ILE
187
C
O
ILE
135
C
N
PHE
165
C
N
PHE
113
C
O
GLN
139
C
O
GLN
87
C
N
ILE
129
C
N
ILE
77
C
N
CYS
126
C
N
CYS
74
C
O
PHE
172
C
O
PHE
120
C
N
VAL
169
C
N
VAL
117
C
O
PHE
182
C
O
PHE
130
C
N
CYS
325
C
N
CYS
273
C
O
ILE
332
C
O
ILE
280
C
N
GLN
387
C
N
GLN
335
C
O
GLU
398
C
O
GLU
346
C
N
LEU
399
C
N
LEU
347
C
O
MET
427
C
O
MET
375
C
O
LEU
428
C
O
LEU
376
C
N
MET
420
C
N
MET
368
1
C
C
GLY
GLU
258
259
-75.06
1
13.02
1.20
119.70
132.72
A
A
A
C3'
O3'
P
DA
DA
DA
1
1
2
Y
1
-13.90
1.90
104.00
90.10
A
A
A
O3'
P
O5'
DA
DA
DA
1
2
2
Y
1
-28.65
2.20
105.20
76.55
A
A
A
O3'
P
OP1
DA
DA
DA
1
2
2
Y
1
9.37
1.50
119.60
128.97
A
A
A
OP1
P
OP2
DA
DA
DA
2
2
2
N
1
8.83
1.20
110.70
119.53
A
A
A
O5'
P
OP1
DA
DA
DA
2
2
2
N
1
2.52
0.30
108.30
110.82
A
A
A
O4'
C1'
N9
DA
DA
DA
2
2
2
N
1
-17.89
1.90
104.00
86.11
A
A
A
O3'
P
O5'
DA
DT
DT
2
3
3
Y
1
-13.39
2.20
105.20
91.81
A
A
A
O3'
P
OP2
DA
DT
DT
2
3
3
Y
1
-23.34
2.20
105.20
81.86
A
A
A
O3'
P
OP1
DA
DT
DT
2
3
3
Y
1
-19.50
1.90
104.00
84.50
A
A
A
O3'
P
O5'
DT
DC
DC
3
4
4
Y
1
-14.05
2.20
105.20
91.15
A
A
A
O3'
P
OP2
DT
DC
DC
3
4
4
Y
1
-19.79
2.20
105.20
85.41
A
A
A
O3'
P
OP1
DT
DC
DC
3
4
4
Y
1
4.33
0.30
108.30
112.63
A
A
A
O4'
C1'
N1
DC
DC
DC
4
4
4
N
1
-4.45
0.70
108.00
103.55
A
A
A
O4'
C1'
N1
DT
DT
DT
6
6
6
N
1
4.03
0.60
119.00
123.03
A
A
A
C4
C5
C7
DT
DT
DT
6
6
6
N
1
10.67
1.20
119.70
130.37
A
A
A
C3'
O3'
P
DT
DT
DT
6
6
7
Y
1
-15.33
1.90
104.00
88.67
A
A
A
O3'
P
O5'
DT
DT
DT
6
7
7
Y
1
-22.90
2.20
105.20
82.30
A
A
A
O3'
P
OP1
DT
DT
DT
6
7
7
Y
1
9.70
1.50
119.60
129.30
A
A
A
OP1
P
OP2
DT
DT
DT
7
7
7
N
1
7.67
1.20
110.70
118.37
A
A
A
O5'
P
OP1
DT
DT
DT
7
7
7
N
1
8.40
1.20
119.70
128.10
A
A
A
C3'
O3'
P
DT
DT
DC
7
7
8
Y
1
-4.66
0.70
108.00
103.34
A
A
A
O4'
C1'
N1
DC
DC
DC
8
8
8
N
1
2.79
0.30
108.30
111.09
A
A
A
O4'
C1'
N1
DC
DC
DC
10
10
10
N
1
-5.46
0.70
108.00
102.54
A
A
A
O4'
C1'
N9
DA
DA
DA
11
11
11
N
1
2.94
0.30
108.30
111.24
A
A
A
O4'
C1'
N9
DG
DG
DG
13
13
13
N
1
8.37
1.20
119.70
128.07
A
A
A
C3'
O3'
P
DG
DG
DA
13
13
14
Y
1
-23.91
1.90
104.00
80.09
A
A
A
O3'
P
O5'
DG
DA
DA
13
14
14
Y
1
-14.84
2.20
105.20
90.36
A
A
A
O3'
P
OP1
DG
DA
DA
13
14
14
Y
1
8.11
1.20
110.70
118.81
A
A
A
O5'
P
OP2
DA
DA
DA
14
14
14
N
1
-6.57
0.80
109.40
102.83
A
A
A
O5'
C5'
C4'
DA
DA
DA
14
14
14
N
1
1.89
0.30
108.30
110.19
A
A
A
O4'
C1'
N9
DA
DA
DA
14
14
14
N
1
5.58
0.60
119.90
125.48
B
B
B
N3
C4
O4
DT
DT
DT
16
16
16
N
1
-6.27
0.70
124.90
118.63
B
B
B
C5
C4
O4
DT
DT
DT
16
16
16
N
1
2.34
0.30
108.30
110.64
B
B
B
O4'
C1'
N1
DT
DT
DT
17
17
17
N
1
-18.22
1.90
104.00
85.78
B
B
B
O3'
P
O5'
DT
DA
DA
17
18
18
Y
1
-23.81
2.20
105.20
81.39
B
B
B
O3'
P
OP1
DT
DA
DA
17
18
18
Y
1
-3.72
0.60
123.70
119.98
B
B
B
C5
C6
N1
DT
DT
DT
19
19
19
N
1
-5.42
0.60
122.90
117.48
B
B
B
C6
C5
C7
DT
DT
DT
19
19
19
N
1
-6.46
0.70
108.00
101.54
B
B
B
O4'
C1'
N1
DC
DC
DC
20
20
20
N
1
-25.20
2.20
105.20
80.00
B
B
B
O3'
P
OP1
DT
DG
DG
22
23
23
Y
1
11.96
1.50
119.60
131.56
B
B
B
OP1
P
OP2
DG
DG
DG
23
23
23
N
1
-23.00
1.90
104.00
81.00
B
B
B
O3'
P
O5'
DG
DT
DT
23
24
24
Y
1
-14.37
2.20
105.20
90.83
B
B
B
O3'
P
OP2
DG
DT
DT
23
24
24
Y
1
3.73
0.30
108.30
112.03
B
B
B
O4'
C1'
N1
DT
DT
DT
24
24
24
N
1
-24.95
1.90
104.00
79.05
B
B
B
O3'
P
O5'
DT
DG
DG
24
25
25
Y
1
-16.77
2.20
105.20
88.43
B
B
B
O3'
P
OP2
DT
DG
DG
24
25
25
Y
1
-17.06
2.20
105.20
88.14
B
B
B
O3'
P
OP1
DT
DG
DG
24
25
25
Y
1
5.42
0.30
108.30
113.72
B
B
B
O4'
C1'
N9
DG
DG
DG
25
25
25
N
1
-27.71
1.90
104.00
76.29
B
B
B
O3'
P
O5'
DG
DA
DA
25
26
26
Y
1
-21.04
2.20
105.20
84.16
B
B
B
O3'
P
OP1
DG
DA
DA
25
26
26
Y
1
7.56
1.20
110.70
118.26
B
B
B
O5'
P
OP1
DA
DA
DA
26
26
26
N
1
-5.04
0.80
109.40
104.36
B
B
B
O5'
C5'
C4'
DA
DA
DA
26
26
26
N
1
-17.78
1.90
104.00
86.22
B
B
B
O3'
P
O5'
DA
DA
DA
26
27
27
Y
1
-22.58
2.20
105.20
82.62
B
B
B
O3'
P
OP1
DA
DA
DA
26
27
27
Y
1
-5.20
0.70
108.00
102.80
B
B
B
O4'
C1'
N9
DA
DA
DA
27
27
27
N
1
-5.11
0.50
120.30
115.19
C
C
C
NE
CZ
NH1
ARG
ARG
ARG
218
218
218
N
1
15.13
2.50
121.70
136.83
C
C
C
C
N
CA
GLU
GLU
GLU
259
260
260
Y
1
13.89
2.30
115.30
129.19
C
C
C
CA
CB
CG
LEU
LEU
LEU
326
326
326
N
1
A
A
N1
C2
DA
DA
1
1
0.081
0.009
1.339
1.420
N
1
A
A
N3
C4
DA
DA
1
1
0.058
0.006
1.344
1.402
N
1
A
A
C4
C5
DA
DA
1
1
0.087
0.007
1.383
1.470
N
1
A
A
C6
N1
DA
DA
1
1
0.053
0.007
1.351
1.404
N
1
A
A
C8
N9
DA
DA
1
1
0.091
0.008
1.373
1.464
N
1
B
B
N1
C2
DT
DT
19
19
0.079
0.008
1.376
1.455
N
1
B
B
C4
C5
DT
DT
19
19
0.091
0.009
1.445
1.536
N
1
B
B
C5
C7
DT
DT
19
19
0.050
0.006
1.496
1.546
N
1
B
B
O4'
C1'
DA
DA
30
30
0.071
0.011
1.420
1.491
N
1
C
ASN
133
-145.32
-105.41
1
C
SER
134
63.45
151.54
1
C
ASP
135
90.28
-48.60
1
C
ASN
202
-93.59
41.72
1
C
ALA
203
-36.79
-39.09
1
C
GLU
260
158.22
-56.80
1
C
PHE
261
95.17
-149.67
1
C
THR
262
91.21
81.94
1
C
LYS
295
61.59
-129.84
1
C
ASP
303
-144.61
20.03
1
C
ASP
318
78.87
-0.72
1
C
GLN
328
49.75
-114.70
36.379
-0.04
0.00
0.00
0.00
0.00
0.04
0.954
0.935
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.24336
0.19706
0.19931
2.00
24.80
2258
42562
5.0
98.25
1.00
0.50
7.821
0.109
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.163
0.157
0.80
0.80
1.20
MAXIMUM LIKELIHOOD
MASK
2.00
24.80
158
4195
34
609
3394
0.018
0.022
4186
2.460
2.154
5784
7.599
5.000
437
36.979
24.125
160
15.147
15.000
629
17.969
15.000
23
0.280
0.200
634
0.008
0.020
2949
0.216
0.200
1543
0.310
0.200
2754
0.137
0.200
215
0.239
0.200
41
0.095
0.200
7
1.412
1.500
2198
2.151
2.000
3453
2.818
3.000
2484
3.930
4.500
2323
0.305
0.215
2.054
148
2753
20
87.94
2.000
30.000
3IAG
44865
0.055
1
19.800
5.500
99.100
0.337
2.00
2.07
5.60
100.00
0.252
2.07
2.15
5.60
100.00
0.200
2.15
2.25
5.70
100.00
0.156
2.25
2.37
5.70
99.90
0.113
2.37
2.52
5.70
100.00
0.088
2.52
2.71
5.70
100.00
0.066
2.71
2.99
5.60
100.00
0.054
2.99
3.42
5.40
98.90
0.045
3.42
4.31
5.20
98.70
0.038
4.31
30.00
4.90
93.90
data reduction
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
DENZO
package
data scaling
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
SCALEPACK
package
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
5.3.0020
data extraction
PDB
help@deposit.rcsb.org
June 11, 2008
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.005
CSL (RBP-Jk) bound to HES-1 nonconsensus site
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
6
N
N
6
N
N
6
N
N
C
THR
58
C
THR
6
HELX_P
C
ARG
69
C
ARG
17
1
1
12
C
SER
104
C
SER
52
HELX_P
C
ASP
116
C
ASP
64
1
2
13
C
SER
119
C
SER
67
HELX_P
C
GLN
124
C
GLN
72
1
3
6
C
SER
199
C
SER
147
HELX_P
C
CYS
206
C
CYS
154
5
4
8
C
GLN
222
C
GLN
170
HELX_P
C
THR
226
C
THR
174
5
5
5
C
ASN
349
C
ASN
297
HELX_P
C
SER
353
C
SER
301
5
6
5
C
ASP
433
C
ASP
381
HELX_P
C
PHE
437
C
PHE
385
5
7
5
hydrog
WATSON-CRICK
A
DT
3
A
N3
DT
3
1_555
B
DA
30
B
N1
DA
15
1_555
hydrog
WATSON-CRICK
A
DT
3
A
O4
DT
3
1_555
B
DA
30
B
N6
DA
15
1_555
hydrog
WATSON-CRICK
A
DC
4
A
N3
DC
4
1_555
B
DG
29
B
N1
DG
14
1_555
hydrog
WATSON-CRICK
A
DC
4
A
N4
DC
4
1_555
B
DG
29
B
O6
DG
14
1_555
hydrog
WATSON-CRICK
A
DC
4
A
O2
DC
4
1_555
B
DG
29
B
N2
DG
14
1_555
hydrog
WATSON-CRICK
A
DT
5
A
N3
DT
5
1_555
B
DA
28
B
N1
DA
13
1_555
hydrog
WATSON-CRICK
A
DT
5
A
O4
DT
5
1_555
B
DA
28
B
N6
DA
13
1_555
hydrog
WATSON-CRICK
A
DT
6
A
N3
DT
6
1_555
B
DA
27
B
N1
DA
12
1_555
hydrog
WATSON-CRICK
A
DT
6
A
O4
DT
6
1_555
B
DA
27
B
N6
DA
12
1_555
hydrog
WATSON-CRICK
A
DT
7
A
N3
DT
7
1_555
B
DA
26
B
N1
DA
11
1_555
hydrog
WATSON-CRICK
A
DT
7
A
O4
DT
7
1_555
B
DA
26
B
N6
DA
11
1_555
hydrog
WATSON-CRICK
A
DC
8
A
N3
DC
8
1_555
B
DG
25
B
N1
DG
10
1_555
hydrog
WATSON-CRICK
A
DC
8
A
N4
DC
8
1_555
B
DG
25
B
O6
DG
10
1_555
hydrog
WATSON-CRICK
A
DC
8
A
O2
DC
8
1_555
B
DG
25
B
N2
DG
10
1_555
hydrog
WATSON-CRICK
A
DA
9
A
N1
DA
9
1_555
B
DT
24
B
N3
DT
9
1_555
hydrog
WATSON-CRICK
A
DA
9
A
N6
DA
9
1_555
B
DT
24
B
O4
DT
9
1_555
hydrog
WATSON-CRICK
A
DC
10
A
N3
DC
10
1_555
B
DG
23
B
N1
DG
8
1_555
hydrog
WATSON-CRICK
A
DC
10
A
N4
DC
10
1_555
B
DG
23
B
O6
DG
8
1_555
hydrog
WATSON-CRICK
A
DC
10
A
O2
DC
10
1_555
B
DG
23
B
N2
DG
8
1_555
hydrog
WATSON-CRICK
A
DA
11
A
N1
DA
11
1_555
B
DT
22
B
N3
DT
7
1_555
hydrog
WATSON-CRICK
A
DA
11
A
N6
DA
11
1_555
B
DT
22
B
O4
DT
7
1_555
hydrog
WATSON-CRICK
A
DC
12
A
N3
DC
12
1_555
B
DG
21
B
N1
DG
6
1_555
hydrog
WATSON-CRICK
A
DC
12
A
N4
DC
12
1_555
B
DG
21
B
O6
DG
6
1_555
hydrog
WATSON-CRICK
A
DC
12
A
O2
DC
12
1_555
B
DG
21
B
N2
DG
6
1_555
hydrog
WATSON-CRICK
A
DG
13
A
N1
DG
13
1_555
B
DC
20
B
N3
DC
5
1_555
hydrog
WATSON-CRICK
A
DG
13
A
N2
DG
13
1_555
B
DC
20
B
O2
DC
5
1_555
hydrog
WATSON-CRICK
A
DG
13
A
O6
DG
13
1_555
B
DC
20
B
N4
DC
5
1_555
hydrog
WATSON-CRICK
A
DA
14
A
N1
DA
14
1_555
B
DT
19
B
N3
DT
4
1_555
hydrog
WATSON-CRICK
A
DA
14
A
N6
DA
14
1_555
B
DT
19
B
O4
DT
4
1_555
hydrog
WATSON-CRICK
A
DT
15
A
N3
DT
15
1_555
B
DA
18
B
N1
DA
3
1_555
hydrog
WATSON-CRICK
A
DT
15
A
O4
DT
15
1_555
B
DA
18
B
N6
DA
3
1_555
TRANSCRIPTION/DNA
protein-DNA complex, signaling, transcription, Notch, Activator, Alternative splicing, DNA-binding, Notch signaling pathway, Nucleus, Repressor, Transcription regulation, TRANSCRIPTION-DNA COMPLEX
C
CYS
94
C
CYS
42
1
C
PRO
95
C
PRO
43
-1.93
C
CYS
94
C
CYS
42
1
C
PRO
95
C
PRO
43
-2.77
C
SER
134
C
SER
82
1
C
ASP
135
C
ASP
83
-0.63
C
GLU
259
C
GLU
207
1
C
GLU
260
C
GLU
208
6.44
C
THR
378
C
THR
326
1
C
PRO
379
C
PRO
327
-6.03
C
ASN
389
C
ASN
337
1
C
GLY
390
C
GLY
338
-3.23
C
GLY
390
C
GLY
338
1
C
GLY
391
C
GLY
339
4.21
SUH_MOUSE
UNP
3
53
P31266
PPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIG
NSDQEMQQLNLEGKNYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTK
VALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRK
VDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEQNKEMINDGASWTIISTDKAEYTFYEGMGP
VLAPVTPVPVVESLQLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPV
TLVRNDGVIYSTSLTFTYTPEP
3IAG
PDB
1
3IAG
AATCTTTCACACGAT
3IAG
PDB
2
3IAG
TTATCGTGTGAAAGA
53
474
3IAG
53
474
P31266
C
1
1
422
1
15
3IAG
1
15
3IAG
A
2
1
15
16
30
3IAG
16
30
3IAG
B
3
1
15
9
12
8
3
4
2
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
C
TYR
148
C
TYR
96
C
THR
150
C
THR
98
C
CYS
98
C
CYS
46
C
MET
102
C
MET
50
C
GLN
72
C
GLN
20
C
ALA
79
C
ALA
27
C
TRP
354
C
TRP
302
C
GLU
368
C
GLU
316
C
LYS
311
C
LYS
259
C
LEU
316
C
LEU
264
C
LEU
288
C
LEU
236
C
ASP
294
C
ASP
242
C
THR
297
C
THR
245
C
LEU
299
C
LEU
247
C
LYS
345
C
LYS
293
C
MET
347
C
MET
295
C
THR
337
C
THR
285
C
PRO
338
C
PRO
286
C
THR
337
C
THR
285
C
PRO
338
C
PRO
286
C
LYS
345
C
LYS
293
C
MET
347
C
MET
295
C
THR
297
C
THR
245
C
LEU
299
C
LEU
247
C
LEU
288
C
LEU
236
C
ASP
294
C
ASP
242
C
THR
273
C
THR
221
C
CYS
278
C
CYS
226
C
PHE
246
C
PHE
194
C
LEU
250
C
LEU
198
C
THR
211
C
THR
159
C
ASN
217
C
ASN
165
C
TRP
354
C
TRP
302
C
GLU
368
C
GLU
316
C
VAL
460
C
VAL
408
C
TYR
470
C
TYR
418
C
VAL
448
C
VAL
396
C
ARG
456
C
ARG
404
C
LEU
408
C
LEU
356
C
PHE
412
C
PHE
360
C
VAL
415
C
VAL
363
C
GLU
416
C
GLU
364
C
ASN
235
C
ASN
183
C
SER
239
C
SER
187
C
ARG
227
C
ARG
175
C
GLU
232
C
GLU
180
C
THR
211
C
THR
159
C
ASN
217
C
ASN
165
C
TRP
354
C
TRP
302
C
GLU
368
C
GLU
316
C
VAL
460
C
VAL
408
C
TYR
470
C
TYR
418
C
VAL
448
C
VAL
396
C
ARG
456
C
ARG
404
C
LEU
408
C
LEU
356
C
PHE
412
C
PHE
360
C
VAL
415
C
VAL
363
C
GLU
416
C
GLU
364
C
VAL
81
C
VAL
29
C
GLN
83
C
GLN
31
C
ILE
187
C
ILE
135
C
ILE
190
C
ILE
138
C
HIS
164
C
HIS
112
C
PHE
165
C
PHE
113
C
GLN
139
C
GLN
87
C
GLN
140
C
GLN
88
C
PRO
125
C
PRO
73
C
ILE
131
C
ILE
79
C
LEU
167
C
LEU
115
C
TYR
173
C
TYR
121
C
ASP
178
C
ASP
126
C
LEU
183
C
LEU
131
C
MET
322
C
MET
270
C
SER
327
C
SER
275
C
ARG
330
C
ARG
278
C
GLN
335
C
GLN
283
C
VAL
382
C
VAL
330
C
LEU
388
C
LEU
336
C
MET
396
C
MET
344
C
GLN
402
C
GLN
350
C
SER
426
C
SER
374
C
VAL
430
C
VAL
378
C
THR
419
C
THR
367
C
CYS
423
C
CYS
371
18
P 21 21 2