0.015217
0.008785
0.000000
0.000000
0.017571
0.000000
0.000000
0.000000
0.005879
0.00000
0.00000
0.00000
Colman, P.M.
Lee, E.F.
Fairlie, W.D.
Smith, B.J.
Czabotar, P.E.
Yang, H.
Sleebs, B.E.
Lessene, G.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
65.717
65.717
170.094
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
ZN
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
284
30508
30517
10.1074/jbc.M109.040725
19726685
Conformational changes in Bcl-2 pro-survival proteins determine their capacity to bind ligands.
2009
10.2210/pdb3io8/pdb
pdb_00003io8
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2008-11-24
ADSC QUANTUM 210r
Si 111 CHANNEL
SINGLE WAVELENGTH
M
x-ray
1
0.9566
1.0
MX1
Australian Synchrotron
0.9566
SYNCHROTRON
AUSTRALIAN SYNCHROTRON BEAMLINE MX1
17917.959
Bcl-2-like protein 1
residues 1-26, and residues 83-209
2
man
polymer
3308.707
Bcl-2-like protein 11
BH3 peptide, residues 141-166
L152P
2
syn
polymer
65.409
ZINC ION
3
syn
non-polymer
18.015
water
29
nat
water
Bcl2-L-1, Apoptosis regulator Bcl-X
Bcl2-L-11, Bcl2-interacting mediator of cell death
no
no
GPLGSMSQSNRELVVDFLSYKLSQKGYSWSQMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELF
RDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEPWIQENGGWDTFVELYGNNAAAESRKGQER
GPLGSMSQSNRELVVDFLSYKLSQKGYSWSQMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELF
RDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEPWIQENGGWDTFVELYGNNAAAESRKGQER
A,C
polypeptide(L)
no
no
DMRPEIWIAQEFRRIGDEFNAYYARR
DMRPEIWIAQEFRRIGDEFNAYYARR
B,D
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
6
31
BCL2L1, BCL2L, BCLX
9606
Homo sapiens
511693
Escherichia coli BL21
BL21
plasmid
pGEX
human
sample
32
158
BCL2L1, BCL2L, BCLX
9606
Homo sapiens
511693
Escherichia coli BL21
BL21
plasmid
pGEX
1
2.50
50.75
VAPOR DIFFUSION, SITTING DROP
8.0
0.02M Zinc Acetate
2.5M Sodium Chloride
0.1M Imidazole, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K
293
diffrn_detector
entity_src_gen
pdbx_unobs_or_zero_occ_atoms
software
database_2
pdbx_unobs_or_zero_occ_atoms
struct_ref_seq_dif
struct_site
chem_comp_atom
chem_comp_bond
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Advisory
Data collection
Refinement description
Source and taxonomy
Advisory
Database references
Derived calculations
Data collection
Refinement description
1
0
2009-09-01
1
1
2011-07-13
1
2
2017-07-26
1
3
2021-10-13
1
4
2023-09-06
_diffrn_detector.detector
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
hBim in complex with hBcl-xL
mBim in complex with mBcl-xL
BimL12Y in complex with Mcl-1
RCSB
Y
RCSB
2009-08-14
REL
REL
ZN
ZINC ION
HOH
water
Synthetic peptide
9606
human
Homo sapiens
sample
2P1L
PDB ID: 2P1L
PDB
experimental model
ZN
1
3
ZN
ZN
210
A
ZN
2
3
ZN
ZN
210
C
ZN
3
3
ZN
ZN
211
C
HOH
28
4
HOH
HOH
28
A
HOH
37
4
HOH
HOH
37
A
HOH
38
4
HOH
HOH
38
A
HOH
39
4
HOH
HOH
39
A
HOH
3
4
HOH
HOH
211
A
HOH
7
4
HOH
HOH
212
A
HOH
14
4
HOH
HOH
213
A
HOH
17
4
HOH
HOH
214
A
HOH
18
4
HOH
HOH
215
A
HOH
24
4
HOH
HOH
216
A
HOH
26
4
HOH
HOH
217
A
HOH
1
4
HOH
HOH
1
B
HOH
6
4
HOH
HOH
6
B
HOH
8
4
HOH
HOH
8
B
HOH
19
4
HOH
HOH
19
B
HOH
21
4
HOH
HOH
21
B
HOH
34
4
HOH
HOH
34
B
HOH
36
4
HOH
HOH
36
B
HOH
29
4
HOH
HOH
29
C
HOH
30
4
HOH
HOH
30
C
HOH
4
4
HOH
HOH
212
C
HOH
9
4
HOH
HOH
213
C
HOH
10
4
HOH
HOH
214
C
HOH
15
4
HOH
HOH
215
C
HOH
16
4
HOH
HOH
216
C
HOH
22
4
HOH
HOH
217
C
HOH
23
4
HOH
HOH
218
C
HOH
25
4
HOH
HOH
219
C
HOH
33
4
HOH
HOH
33
D
n
1
-4
A
PRO
-3
n
2
PRO
-3
A
LEU
-2
n
3
LEU
-2
A
GLY
-1
n
4
GLY
-1
A
SER
0
n
5
SER
0
A
MET
1
n
6
MET
1
A
SER
2
n
7
SER
2
A
GLN
3
n
8
GLN
3
A
SER
4
n
9
SER
4
A
ASN
5
n
10
ASN
5
A
ARG
6
n
11
ARG
6
A
GLU
7
n
12
GLU
7
A
LEU
8
n
13
LEU
8
A
VAL
9
n
14
VAL
9
A
VAL
10
n
15
VAL
10
A
ASP
11
n
16
ASP
11
A
PHE
12
n
17
PHE
12
A
LEU
13
n
18
LEU
13
A
SER
14
n
19
SER
14
A
TYR
15
n
20
TYR
15
A
LYS
16
n
21
LYS
16
A
LEU
17
n
22
LEU
17
A
SER
18
n
23
SER
18
A
GLN
19
n
24
GLN
19
A
LYS
20
n
25
LYS
20
A
GLY
21
n
26
GLY
21
A
TYR
22
n
27
TYR
22
A
SER
23
n
28
SER
23
A
TRP
24
n
29
TRP
24
A
SER
25
n
30
SER
25
A
GLN
26
n
31
GLN
26
A
MET
83
n
32
MET
83
A
ALA
84
n
33
ALA
84
A
ALA
85
n
34
ALA
85
A
VAL
86
n
35
VAL
86
A
LYS
87
n
36
LYS
87
A
GLN
88
n
37
GLN
88
A
ALA
89
n
38
ALA
89
A
LEU
90
n
39
LEU
90
A
ARG
91
n
40
ARG
91
A
GLU
92
n
41
GLU
92
A
ALA
93
n
42
ALA
93
A
GLY
94
n
43
GLY
94
A
ASP
95
n
44
ASP
95
A
GLU
96
n
45
GLU
96
A
PHE
97
n
46
PHE
97
A
GLU
98
n
47
GLU
98
A
LEU
99
n
48
LEU
99
A
ARG
100
n
49
ARG
100
A
TYR
101
n
50
TYR
101
A
ARG
102
n
51
ARG
102
A
ARG
103
n
52
ARG
103
A
ALA
104
n
53
ALA
104
A
PHE
105
n
54
PHE
105
A
SER
106
n
55
SER
106
A
ASP
107
n
56
ASP
107
A
LEU
108
n
57
LEU
108
A
n
58
109
A
n
59
110
A
n
60
111
A
LEU
112
n
61
LEU
112
A
HIS
113
n
62
HIS
113
A
ILE
114
n
63
ILE
114
A
THR
115
n
64
THR
115
A
PRO
116
n
65
PRO
116
A
GLY
117
n
66
GLY
117
A
THR
118
n
67
THR
118
A
ALA
119
n
68
ALA
119
A
TYR
120
n
69
TYR
120
A
GLN
121
n
70
GLN
121
A
SER
122
n
71
SER
122
A
PHE
123
n
72
PHE
123
A
GLU
124
n
73
GLU
124
A
GLN
125
n
74
GLN
125
A
VAL
126
n
75
VAL
126
A
VAL
127
n
76
VAL
127
A
ASN
128
n
77
ASN
128
A
GLU
129
n
78
GLU
129
A
LEU
130
n
79
LEU
130
A
PHE
131
n
80
PHE
131
A
ARG
132
n
81
ARG
132
A
ASP
133
n
82
ASP
133
A
GLY
134
n
83
GLY
134
A
VAL
135
n
84
VAL
135
A
ASN
136
n
85
ASN
136
A
TRP
137
n
86
TRP
137
A
GLY
138
n
87
GLY
138
A
ARG
139
n
88
ARG
139
A
ILE
140
n
89
ILE
140
A
VAL
141
n
90
VAL
141
A
ALA
142
n
91
ALA
142
A
PHE
143
n
92
PHE
143
A
PHE
144
n
93
PHE
144
A
SER
145
n
94
SER
145
A
PHE
146
n
95
PHE
146
A
GLY
147
n
96
GLY
147
A
GLY
148
n
97
GLY
148
A
ALA
149
n
98
ALA
149
A
LEU
150
n
99
LEU
150
A
CYS
151
n
100
CYS
151
A
VAL
152
n
101
VAL
152
A
GLU
153
n
102
GLU
153
A
SER
154
n
103
SER
154
A
VAL
155
n
104
VAL
155
A
ASP
156
n
105
ASP
156
A
LYS
157
n
106
LYS
157
A
GLU
158
n
107
GLU
158
A
MET
159
n
108
MET
159
A
GLN
160
n
109
GLN
160
A
VAL
161
n
110
VAL
161
A
LEU
162
n
111
LEU
162
A
VAL
163
n
112
VAL
163
A
SER
164
n
113
SER
164
A
ARG
165
n
114
ARG
165
A
ILE
166
n
115
ILE
166
A
ALA
167
n
116
ALA
167
A
ALA
168
n
117
ALA
168
A
TRP
169
n
118
TRP
169
A
MET
170
n
119
MET
170
A
ALA
171
n
120
ALA
171
A
THR
172
n
121
THR
172
A
TYR
173
n
122
TYR
173
A
LEU
174
n
123
LEU
174
A
ASN
175
n
124
ASN
175
A
ASP
176
n
125
ASP
176
A
HIS
177
n
126
HIS
177
A
LEU
178
n
127
LEU
178
A
GLU
179
n
128
GLU
179
A
PRO
180
n
129
PRO
180
A
TRP
181
n
130
TRP
181
A
ILE
182
n
131
ILE
182
A
GLN
183
n
132
GLN
183
A
GLU
184
n
133
GLU
184
A
ASN
185
n
134
ASN
185
A
GLY
186
n
135
GLY
186
A
GLY
187
n
136
GLY
187
A
TRP
188
n
137
TRP
188
A
ASP
189
n
138
ASP
189
A
THR
190
n
139
THR
190
A
PHE
191
n
140
PHE
191
A
VAL
192
n
141
VAL
192
A
GLU
193
n
142
GLU
193
A
LEU
194
n
143
LEU
194
A
TYR
195
n
144
TYR
195
A
GLY
196
n
145
GLY
196
A
ASN
197
n
146
ASN
197
A
n
147
198
A
n
148
199
A
n
149
200
A
n
150
201
A
n
151
202
A
n
152
203
A
n
153
204
A
n
154
205
A
n
155
206
A
n
156
207
A
n
157
208
A
n
158
209
A
n
1
51
B
n
2
52
B
n
3
53
B
PRO
54
n
4
PRO
54
B
GLU
55
n
5
GLU
55
B
ILE
56
n
6
ILE
56
B
TRP
57
n
7
TRP
57
B
ILE
58
n
8
ILE
58
B
ALA
59
n
9
ALA
59
B
GLN
60
n
10
GLN
60
B
GLU
61
n
11
GLU
61
B
PHE
62
n
12
PHE
62
B
ARG
63
n
13
ARG
63
B
ARG
64
n
14
ARG
64
B
ILE
65
n
15
ILE
65
B
GLY
66
n
16
GLY
66
B
ASP
67
n
17
ASP
67
B
GLU
68
n
18
GLU
68
B
PHE
69
n
19
PHE
69
B
ASN
70
n
20
ASN
70
B
ALA
71
n
21
ALA
71
B
TYR
72
n
22
TYR
72
B
TYR
73
n
23
TYR
73
B
ALA
74
n
24
ALA
74
B
ARG
75
n
25
ARG
75
B
ARG
76
n
26
ARG
76
B
GLY
-4
n
1
GLY
-4
C
PRO
-3
n
2
PRO
-3
C
LEU
-2
n
3
LEU
-2
C
GLY
-1
n
4
GLY
-1
C
SER
0
n
5
SER
0
C
MET
1
n
6
MET
1
C
SER
2
n
7
SER
2
C
GLN
3
n
8
GLN
3
C
SER
4
n
9
SER
4
C
ASN
5
n
10
ASN
5
C
ARG
6
n
11
ARG
6
C
GLU
7
n
12
GLU
7
C
LEU
8
n
13
LEU
8
C
VAL
9
n
14
VAL
9
C
VAL
10
n
15
VAL
10
C
ASP
11
n
16
ASP
11
C
PHE
12
n
17
PHE
12
C
LEU
13
n
18
LEU
13
C
SER
14
n
19
SER
14
C
TYR
15
n
20
TYR
15
C
LYS
16
n
21
LYS
16
C
LEU
17
n
22
LEU
17
C
SER
18
n
23
SER
18
C
GLN
19
n
24
GLN
19
C
LYS
20
n
25
LYS
20
C
GLY
21
n
26
GLY
21
C
TYR
22
n
27
TYR
22
C
SER
23
n
28
SER
23
C
TRP
24
n
29
TRP
24
C
SER
25
n
30
SER
25
C
GLN
26
n
31
GLN
26
C
MET
83
n
32
MET
83
C
ALA
84
n
33
ALA
84
C
ALA
85
n
34
ALA
85
C
VAL
86
n
35
VAL
86
C
LYS
87
n
36
LYS
87
C
GLN
88
n
37
GLN
88
C
ALA
89
n
38
ALA
89
C
LEU
90
n
39
LEU
90
C
ARG
91
n
40
ARG
91
C
GLU
92
n
41
GLU
92
C
ALA
93
n
42
ALA
93
C
GLY
94
n
43
GLY
94
C
ASP
95
n
44
ASP
95
C
GLU
96
n
45
GLU
96
C
PHE
97
n
46
PHE
97
C
GLU
98
n
47
GLU
98
C
LEU
99
n
48
LEU
99
C
ARG
100
n
49
ARG
100
C
TYR
101
n
50
TYR
101
C
ARG
102
n
51
ARG
102
C
ARG
103
n
52
ARG
103
C
ALA
104
n
53
ALA
104
C
PHE
105
n
54
PHE
105
C
SER
106
n
55
SER
106
C
ASP
107
n
56
ASP
107
C
LEU
108
n
57
LEU
108
C
THR
109
n
58
THR
109
C
SER
110
n
59
SER
110
C
GLN
111
n
60
GLN
111
C
LEU
112
n
61
LEU
112
C
HIS
113
n
62
HIS
113
C
ILE
114
n
63
ILE
114
C
THR
115
n
64
THR
115
C
PRO
116
n
65
PRO
116
C
GLY
117
n
66
GLY
117
C
THR
118
n
67
THR
118
C
ALA
119
n
68
ALA
119
C
TYR
120
n
69
TYR
120
C
GLN
121
n
70
GLN
121
C
SER
122
n
71
SER
122
C
PHE
123
n
72
PHE
123
C
GLU
124
n
73
GLU
124
C
GLN
125
n
74
GLN
125
C
VAL
126
n
75
VAL
126
C
VAL
127
n
76
VAL
127
C
ASN
128
n
77
ASN
128
C
GLU
129
n
78
GLU
129
C
LEU
130
n
79
LEU
130
C
PHE
131
n
80
PHE
131
C
ARG
132
n
81
ARG
132
C
ASP
133
n
82
ASP
133
C
GLY
134
n
83
GLY
134
C
VAL
135
n
84
VAL
135
C
ASN
136
n
85
ASN
136
C
TRP
137
n
86
TRP
137
C
GLY
138
n
87
GLY
138
C
ARG
139
n
88
ARG
139
C
ILE
140
n
89
ILE
140
C
VAL
141
n
90
VAL
141
C
ALA
142
n
91
ALA
142
C
PHE
143
n
92
PHE
143
C
PHE
144
n
93
PHE
144
C
SER
145
n
94
SER
145
C
PHE
146
n
95
PHE
146
C
GLY
147
n
96
GLY
147
C
GLY
148
n
97
GLY
148
C
ALA
149
n
98
ALA
149
C
LEU
150
n
99
LEU
150
C
CYS
151
n
100
CYS
151
C
VAL
152
n
101
VAL
152
C
GLU
153
n
102
GLU
153
C
SER
154
n
103
SER
154
C
VAL
155
n
104
VAL
155
C
ASP
156
n
105
ASP
156
C
LYS
157
n
106
LYS
157
C
GLU
158
n
107
GLU
158
C
MET
159
n
108
MET
159
C
GLN
160
n
109
GLN
160
C
VAL
161
n
110
VAL
161
C
LEU
162
n
111
LEU
162
C
VAL
163
n
112
VAL
163
C
SER
164
n
113
SER
164
C
ARG
165
n
114
ARG
165
C
ILE
166
n
115
ILE
166
C
ALA
167
n
116
ALA
167
C
ALA
168
n
117
ALA
168
C
TRP
169
n
118
TRP
169
C
MET
170
n
119
MET
170
C
ALA
171
n
120
ALA
171
C
THR
172
n
121
THR
172
C
TYR
173
n
122
TYR
173
C
LEU
174
n
123
LEU
174
C
ASN
175
n
124
ASN
175
C
ASP
176
n
125
ASP
176
C
HIS
177
n
126
HIS
177
C
LEU
178
n
127
LEU
178
C
GLU
179
n
128
GLU
179
C
PRO
180
n
129
PRO
180
C
TRP
181
n
130
TRP
181
C
ILE
182
n
131
ILE
182
C
GLN
183
n
132
GLN
183
C
GLU
184
n
133
GLU
184
C
ASN
185
n
134
ASN
185
C
GLY
186
n
135
GLY
186
C
GLY
187
n
136
GLY
187
C
TRP
188
n
137
TRP
188
C
ASP
189
n
138
ASP
189
C
THR
190
n
139
THR
190
C
PHE
191
n
140
PHE
191
C
VAL
192
n
141
VAL
192
C
GLU
193
n
142
GLU
193
C
LEU
194
n
143
LEU
194
C
TYR
195
n
144
TYR
195
C
GLY
196
n
145
GLY
196
C
ASN
197
n
146
ASN
197
C
n
147
198
C
n
148
199
C
n
149
200
C
n
150
201
C
n
151
202
C
n
152
203
C
n
153
204
C
n
154
205
C
n
155
206
C
n
156
207
C
n
157
208
C
n
158
209
C
n
1
51
D
n
2
52
D
ARG
53
n
3
ARG
53
D
PRO
54
n
4
PRO
54
D
GLU
55
n
5
GLU
55
D
ILE
56
n
6
ILE
56
D
TRP
57
n
7
TRP
57
D
ILE
58
n
8
ILE
58
D
ALA
59
n
9
ALA
59
D
GLN
60
n
10
GLN
60
D
GLU
61
n
11
GLU
61
D
PHE
62
n
12
PHE
62
D
ARG
63
n
13
ARG
63
D
ARG
64
n
14
ARG
64
D
ILE
65
n
15
ILE
65
D
GLY
66
n
16
GLY
66
D
ASP
67
n
17
ASP
67
D
GLU
68
n
18
GLU
68
D
PHE
69
n
19
PHE
69
D
ASN
70
n
20
ASN
70
D
ALA
71
n
21
ALA
71
D
n
22
72
D
n
23
73
D
n
24
74
D
n
25
75
D
n
26
76
D
author_and_software_defined_assembly
PISA
2
dimeric
author_and_software_defined_assembly
PISA
2
dimeric
2110
-45
10670
1900
-27
10050
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
B
HOH
36
I
HOH
1
A
CD
GLN
160
A
CD
GLN
109
0
Y
1
B
CG
GLU
55
B
CG
GLU
5
1
Y
1
B
CD
GLU
55
B
CD
GLU
5
1
Y
1
B
OE1
GLU
55
B
OE1
GLU
5
1
Y
1
B
OE2
GLU
55
B
OE2
GLU
5
1
Y
1
A
GLY
-4
A
GLY
1
1
Y
1
A
THR
109
A
THR
58
1
Y
1
A
SER
110
A
SER
59
1
Y
1
A
GLN
111
A
GLN
60
1
Y
1
A
ASN
198
A
ASN
147
1
Y
1
A
ALA
199
A
ALA
148
1
Y
1
A
ALA
200
A
ALA
149
1
Y
1
A
ALA
201
A
ALA
150
1
Y
1
A
GLU
202
A
GLU
151
1
Y
1
A
SER
203
A
SER
152
1
Y
1
A
ARG
204
A
ARG
153
1
Y
1
A
LYS
205
A
LYS
154
1
Y
1
A
GLY
206
A
GLY
155
1
Y
1
A
GLN
207
A
GLN
156
1
Y
1
A
GLU
208
A
GLU
157
1
Y
1
A
ARG
209
A
ARG
158
1
Y
1
B
ASP
51
B
ASP
1
1
Y
1
B
MET
52
B
MET
2
1
Y
1
B
ARG
53
B
ARG
3
1
Y
1
C
ASN
198
C
ASN
147
1
Y
1
C
ALA
199
C
ALA
148
1
Y
1
C
ALA
200
C
ALA
149
1
Y
1
C
ALA
201
C
ALA
150
1
Y
1
C
GLU
202
C
GLU
151
1
Y
1
C
SER
203
C
SER
152
1
Y
1
C
ARG
204
C
ARG
153
1
Y
1
C
LYS
205
C
LYS
154
1
Y
1
C
GLY
206
C
GLY
155
1
Y
1
C
GLN
207
C
GLN
156
1
Y
1
C
GLU
208
C
GLU
157
1
Y
1
C
ARG
209
C
ARG
158
1
Y
1
D
ASP
51
D
ASP
1
1
Y
1
D
MET
52
D
MET
2
1
Y
1
D
TYR
72
D
TYR
22
1
Y
1
D
TYR
73
D
TYR
23
1
Y
1
D
ALA
74
D
ALA
24
1
Y
1
D
ARG
75
D
ARG
25
1
Y
1
D
ARG
76
D
ARG
26
1
Y
1
A
ASP
107
36.06
55.37
1
A
HIS
113
45.35
70.69
1
A
THR
118
-96.22
30.11
1
A
GLU
158
61.81
-0.55
1
A
MET
159
-66.77
21.43
1
A
HIS
177
-131.59
-39.87
1
A
ILE
182
-37.79
-36.26
1
A
ASN
185
-91.17
37.77
1
B
ILE
56
-25.41
-48.94
1
C
ARG
100
-58.13
-70.90
1
C
ASP
107
31.05
66.22
1
C
HIS
113
77.48
50.80
1
C
GLU
124
-55.93
-73.33
1
C
PHE
131
-108.38
41.91
1
C
LYS
157
-89.44
40.28
1
C
GLU
158
64.68
-21.07
0.2307
0.1850
0.1873
2.300
47.299
948
18462
18425
5.15
99.80
1
1.35
MOLECULAR REPLACEMENT
39.78
0.90
1.11
PDB ID: 2P1L
TWIN_LSQ_F
FLAT BULK SOLVENT MODEL
63.176
0.360
2.300
47.299
29
2718
3
0
2686
0.004
2754
0.765
3721
15.845
967
0.055
380
0.002
482
0.3193
0.3165
2.3921
111
1925
98.00
0.3111
0.2954
2.5010
95
1944
98.00
0.3307
0.3039
2.6328
108
1966
98.00
0.2822
0.2730
2.7978
96
1918
98.00
0.2755
0.2534
3.0138
115
1932
98.00
0.2361
0.2386
3.3170
108
1947
98.00
0.2246
0.2013
3.7968
114
1935
98.00
0.1988
0.1358
4.7828
100
1958
98.00
0.1904
0.1028
47.3090
99
1954
98.00
2.30
50.00
3IO8
18501
18464
0.0
0.0
0.147
1
7.4
99.8
0.835
2.30
2.38
2.7
0.835
5.8
99.3
data collection
Blu-Ice
phasing
PHASER
refinement
PHENIX
(phenix.refine)
data reduction
HKL-2000
data scaling
HKL-2000
BimL12F in complex with Bcl-xL
1
N
N
2
N
N
1
N
N
2
N
N
3
N
N
3
N
N
3
N
N
4
N
N
4
N
N
4
N
N
4
N
N
The biological assembly is one half of the asymmetric unit.
A
SER
0
A
SER
5
HELX_P
A
LYS
20
A
LYS
25
1
1
21
A
SER
25
A
SER
30
HELX_P
A
TYR
101
A
TYR
50
1
2
21
A
ARG
102
A
ARG
51
HELX_P
A
SER
106
A
SER
55
5
3
5
A
THR
118
A
THR
67
HELX_P
A
PHE
131
A
PHE
80
1
4
14
A
ASN
136
A
ASN
85
HELX_P
A
ASP
156
A
ASP
105
1
5
21
A
LYS
157
A
LYS
106
HELX_P
A
MET
159
A
MET
108
5
6
3
A
GLN
160
A
GLN
109
HELX_P
A
HIS
177
A
HIS
126
1
7
18
A
HIS
177
A
HIS
126
HELX_P
A
ASN
185
A
ASN
134
1
8
9
A
GLY
187
A
GLY
136
HELX_P
A
GLY
196
A
GLY
145
1
9
10
B
GLU
55
B
GLU
5
HELX_P
B
ARG
76
B
ARG
26
1
10
22
C
SER
0
C
SER
5
HELX_P
C
GLY
21
C
GLY
26
1
11
22
C
SER
25
C
SER
30
HELX_P
C
TYR
101
C
TYR
50
1
12
21
C
ARG
102
C
ARG
51
HELX_P
C
SER
106
C
SER
55
5
13
5
C
ASP
107
C
ASP
56
HELX_P
C
HIS
113
C
HIS
62
1
14
7
C
THR
118
C
THR
67
HELX_P
C
PHE
131
C
PHE
80
1
15
14
C
ASN
136
C
ASN
85
HELX_P
C
LYS
157
C
LYS
106
1
16
22
C
GLU
158
C
GLU
107
HELX_P
C
GLN
160
C
GLN
109
5
17
3
C
VAL
161
C
VAL
110
HELX_P
C
ASN
185
C
ASN
134
1
18
25
C
GLY
187
C
GLY
136
HELX_P
C
GLY
196
C
GLY
145
1
19
10
D
ARG
53
D
ARG
3
HELX_P
D
ALA
71
D
ALA
21
1
20
19
metalc
2.345
C
HIS
113
C
ND1
HIS
62
1_555
C
ZN
210
F
ZN
ZN
1_555
APOPTOSIS
helical bundle, Bcl-2-like fold, Alternative splicing, Apoptosis, Membrane, Mitochondrion, Nucleus, Transmembrane, Phosphoprotein
C
GLY
-4
C
GLY
1
1
C
PRO
-3
C
PRO
2
0.48
B2CL1_HUMAN
UNP
1
1
Q07817
MSQSNRELVVDFLSYKLSQKGYSWSQ
B2CL1_HUMAN
UNP
1
83
Q07817
MAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVL
VSRIAAWMATYLNDHLEPWIQENGGWDTFVELYGNNAAAESRKGQER
B2L11_HUMAN
UNP
2
141
O43521
DMRPEIWIAQELRRIGDEFNAYYARR
1
26
3IO8
1
26
Q07817
A
1
6
31
83
209
3IO8
83
209
Q07817
A
2
32
158
141
166
3IO8
51
76
O43521
B
3
1
26
1
26
3IO8
1
26
Q07817
C
1
6
31
83
209
3IO8
83
209
Q07817
C
2
32
158
141
166
3IO8
51
76
O43521
D
3
1
26
1
expression tag
GLY
-4
3IO8
A
Q07817
UNP
1
1
expression tag
PRO
-3
3IO8
A
Q07817
UNP
2
1
expression tag
LEU
-2
3IO8
A
Q07817
UNP
3
1
expression tag
GLY
-1
3IO8
A
Q07817
UNP
4
1
expression tag
SER
0
3IO8
A
Q07817
UNP
5
3
LEU
engineered mutation
PHE
62
3IO8
B
O43521
UNP
152
12
4
expression tag
GLY
-4
3IO8
C
Q07817
UNP
1
4
expression tag
PRO
-3
3IO8
C
Q07817
UNP
2
4
expression tag
LEU
-2
3IO8
C
Q07817
UNP
3
4
expression tag
GLY
-1
3IO8
C
Q07817
UNP
4
4
expression tag
SER
0
3IO8
C
Q07817
UNP
5
6
LEU
engineered mutation
PHE
62
3IO8
D
O43521
UNP
152
12
BINDING SITE FOR RESIDUE ZN A 210
A
ZN
210
Software
1
BINDING SITE FOR RESIDUE ZN C 210
C
ZN
210
Software
4
BINDING SITE FOR RESIDUE ZN C 211
C
ZN
211
Software
1
A
HOH
211
H
HOH
1
1_555
A
HOH
28
H
HOH
4
2_654
A
HIS
177
A
HIS
126
4
2_654
C
HIS
113
C
HIS
62
4
1_555
C
HOH
215
J
HOH
4
1_555
C
GLY
-4
C
GLY
1
1
1_555
171
P 62