0.005872
0.003390
0.000000
0.000000
0.006780
0.000000
0.000000
0.000000
0.006433
0.00000
0.00000
0.00000
Das, K.
Arnold, E.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
170.310
170.310
155.440
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O6 P
331.222
n
2',3'-DIDEOXY-GUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C13 H20 N5 O7 P S
421.366
n
N2-(3-MERCAPTOPROPYL)-2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H16 N5 O10 P3
447.172
[2-(6-AMINO-9H-PURIN-9-YL)-1-METHYLETHOXY]METHYL-TRIPHOSPHATE
TENOFOVIR-DIPHOSPHATE
non-polymer
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
O
N
89
N
P
N
90
N
O
N
91
N
O
N
92
N
O
N
93
N
C
N
94
R
C
N
95
N
O
N
96
S
C
N
97
N
O
N
98
N
C
N
99
R
C
Y
100
N
N
Y
101
N
C
Y
102
N
N
Y
103
N
C
Y
104
N
C
N
105
N
N
Y
106
N
N
Y
107
N
C
Y
108
N
N
Y
109
N
C
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
O
N
125
N
P
N
126
N
O
N
127
N
O
N
128
N
O
N
129
N
C
N
130
R
C
N
131
N
O
N
132
S
C
N
133
N
O
N
134
N
C
N
135
R
C
N
136
N
N
N
137
N
C
N
138
N
O
N
139
N
N
N
140
N
C
N
141
N
N
N
142
N
C
N
143
N
C
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
P
N
160
N
O
N
161
N
O
N
162
N
O
N
163
N
C
N
164
S
C
N
165
N
O
N
166
N
C
N
167
N
C
N
168
R
C
Y
169
N
N
Y
170
N
C
Y
171
N
N
Y
172
N
C
N
173
N
C
N
174
N
O
N
175
N
N
N
176
N
C
N
177
N
N
N
178
N
N
Y
179
N
C
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
O
N
195
N
P
N
196
N
O
N
197
N
O
N
198
N
O
N
199
N
C
N
200
R
C
N
201
N
O
N
202
S
C
N
203
N
O
N
204
N
C
N
205
R
C
Y
206
N
N
Y
207
N
C
Y
208
N
N
Y
209
N
C
N
210
N
C
N
211
N
O
N
212
N
N
N
213
N
C
N
214
N
N
N
215
N
N
Y
216
N
C
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
O
N
232
N
P
N
233
N
O
N
234
N
O
N
235
N
O
N
236
N
C
N
237
R
C
N
238
N
O
N
239
S
C
N
240
N
O
N
241
N
C
N
242
R
C
N
243
N
N
N
244
N
C
N
245
N
O
N
246
N
N
N
247
N
C
N
248
N
O
N
249
N
C
N
250
N
C
N
251
N
C
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
N
N
268
S
C
N
269
N
C
N
270
N
O
N
271
N
C
N
272
N
C
N
273
N
C
N
274
N
O
N
275
N
N
N
276
N
O
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
N
C
N
292
N
C
N
293
N
C
N
294
N
O
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
N
N
307
N
C
N
308
N
C
N
309
N
O
N
310
N
O
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
N
N
317
S
C
N
318
N
C
N
319
N
O
N
320
N
C
Y
321
N
C
Y
322
N
N
Y
323
N
C
Y
324
N
C
Y
325
N
N
N
326
N
O
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
O
N
338
N
H
N
339
N
H
N
340
N
N
N
341
S
C
N
342
N
C
N
343
N
O
N
344
S
C
N
345
N
C
N
346
N
C
N
347
N
C
N
348
N
O
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
N
N
363
S
C
N
364
N
C
N
365
N
O
N
366
N
C
N
367
N
C
N
368
N
C
N
369
N
C
N
370
N
O
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
N
N
385
S
C
N
386
N
C
N
387
N
O
N
388
N
C
N
389
N
C
N
390
N
C
N
391
N
C
N
392
N
N
N
393
N
O
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
N
N
410
S
C
N
411
N
C
N
412
N
O
N
413
N
C
N
414
N
C
N
415
N
S
N
416
N
C
N
417
N
O
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
MG
N
430
N
P
N
431
N
O
N
432
N
O
N
433
N
O
Y
434
N
N
Y
435
N
C
N
436
N
N
N
437
N
C
N
438
N
N
N
439
N
C
N
440
N
O
Y
441
N
C
Y
442
N
N
Y
443
N
C
N
444
N
N
N
445
N
C
N
446
N
C
N
447
N
C
N
448
N
S
N
449
N
C
N
450
N
C
N
451
R
C
N
452
N
O
N
453
R
C
N
454
S
C
N
455
N
O
N
456
N
O
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
H
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
N
N
478
S
C
N
479
N
C
N
480
N
O
N
481
N
C
Y
482
N
C
Y
483
N
C
Y
484
N
C
Y
485
N
C
Y
486
N
C
Y
487
N
C
N
488
N
O
N
489
N
H
N
490
N
H
N
491
N
H
N
492
N
H
N
493
N
H
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
H
N
498
N
H
N
499
N
H
N
500
N
N
N
501
S
C
N
502
N
C
N
503
N
O
N
504
N
C
N
505
N
C
N
506
N
C
N
507
N
O
N
508
N
H
N
509
N
H
N
510
N
H
N
511
N
H
N
512
N
H
N
513
N
H
N
514
N
H
N
515
N
H
N
516
N
H
N
517
N
N
N
518
S
C
N
519
N
C
N
520
N
O
N
521
N
C
N
522
N
O
N
523
N
O
N
524
N
H
N
525
N
H
N
526
N
H
N
527
N
H
N
528
N
H
N
529
N
H
N
530
N
H
N
531
N
S
N
532
N
O
N
533
N
O
N
534
N
O
N
535
N
O
N
536
N
N
N
537
S
C
N
538
N
C
N
539
N
O
N
540
R
C
N
541
N
O
N
542
N
C
N
543
N
O
N
544
N
H
N
545
N
H
N
546
N
H
N
547
N
H
N
548
N
H
N
549
N
H
N
550
N
H
N
551
N
H
N
552
N
H
N
553
S
P
N
554
N
O
N
555
N
O
N
556
N
O
N
557
S
P
N
558
N
O
N
559
N
O
N
560
N
O
N
561
N
P
N
562
N
O
N
563
N
O
N
564
N
O
N
565
N
C
N
566
N
O
N
567
N
C
N
568
R
C
N
569
N
C
Y
570
N
N
Y
571
N
C
Y
572
N
N
Y
573
N
C
Y
574
N
N
Y
575
N
C
N
576
N
N
Y
577
N
C
Y
578
N
N
Y
579
N
C
N
580
N
H
N
581
N
H
N
582
N
H
N
583
N
H
N
584
N
H
N
585
N
H
N
586
N
H
N
587
N
H
N
588
N
H
N
589
N
H
N
590
N
H
N
591
N
H
N
592
N
H
N
593
N
H
N
594
N
H
N
595
N
H
N
596
N
N
N
597
S
C
N
598
N
C
N
599
N
O
N
600
N
C
Y
601
N
C
Y
602
N
C
Y
603
N
C
Y
604
N
N
Y
605
N
C
Y
606
N
C
Y
607
N
C
Y
608
N
C
Y
609
N
C
N
610
N
O
N
611
N
H
N
612
N
H
N
613
N
H
N
614
N
H
N
615
N
H
N
616
N
H
N
617
N
H
N
618
N
H
N
619
N
H
N
620
N
H
N
621
N
H
N
622
N
H
N
623
N
N
N
624
S
C
N
625
N
C
N
626
N
O
N
627
N
C
Y
628
N
C
Y
629
N
C
Y
630
N
C
Y
631
N
C
Y
632
N
C
Y
633
N
C
N
634
N
O
N
635
N
O
N
636
N
H
N
637
N
H
N
638
N
H
N
639
N
H
N
640
N
H
N
641
N
H
N
642
N
H
N
643
N
H
N
644
N
H
N
645
N
H
N
646
N
H
N
647
N
N
N
648
S
C
N
649
N
C
N
650
N
O
N
651
N
C
N
652
N
C
N
653
N
C
N
654
N
O
N
655
N
H
N
656
N
H
N
657
N
H
N
658
N
H
N
659
N
H
N
660
N
H
N
661
N
H
N
662
N
H
N
663
N
H
N
664
N
H
N
665
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
doub
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
Y
106
N
sing
Y
107
N
sing
Y
108
N
doub
N
109
N
sing
Y
110
N
sing
Y
111
N
sing
Y
112
N
doub
N
113
N
sing
Y
114
N
doub
N
115
N
sing
N
116
N
sing
Y
117
N
sing
Y
118
N
doub
N
119
N
sing
Y
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
Y
178
N
sing
Y
179
N
sing
Y
180
N
doub
N
181
N
sing
Y
182
N
sing
N
183
N
sing
Y
184
N
doub
N
185
N
doub
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
doub
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
doub
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
Y
217
N
sing
Y
218
N
sing
Y
219
N
doub
N
220
N
sing
Y
221
N
sing
N
222
N
sing
Y
223
N
doub
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
doub
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
doub
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
doub
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
doub
N
263
N
sing
N
264
N
sing
N
265
N
doub
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
doub
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
doub
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
doub
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
doub
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
doub
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
doub
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
Y
327
N
sing
Y
328
N
doub
Y
329
N
doub
N
330
N
sing
Y
331
N
sing
N
332
N
sing
Y
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
doub
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
doub
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
doub
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
doub
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
doub
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
Y
430
N
sing
Y
431
N
sing
N
432
N
sing
N
433
N
sing
Y
434
N
doub
N
435
N
doub
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
doub
N
441
N
sing
Y
442
N
sing
Y
443
N
doub
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
doub
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
Y
484
N
doub
Y
485
N
sing
Y
486
N
sing
N
487
N
sing
Y
488
N
doub
N
489
N
sing
Y
490
N
doub
N
491
N
sing
Y
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
sing
N
497
N
sing
N
498
N
sing
N
499
N
sing
N
500
N
sing
N
501
N
sing
N
502
N
doub
N
503
N
sing
N
504
N
sing
N
505
N
sing
N
506
N
sing
N
507
N
sing
N
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
sing
N
512
N
sing
N
513
N
sing
N
514
N
sing
N
515
N
sing
N
516
N
sing
N
517
N
sing
N
518
N
sing
N
519
N
doub
N
520
N
sing
N
521
N
sing
N
522
N
sing
N
523
N
sing
N
524
N
sing
N
525
N
sing
N
526
N
doub
N
527
N
doub
N
528
N
sing
N
529
N
sing
N
530
N
sing
N
531
N
sing
N
532
N
sing
N
533
N
sing
N
534
N
sing
N
535
N
sing
N
536
N
doub
N
537
N
sing
N
538
N
sing
N
539
N
sing
N
540
N
sing
N
541
N
sing
N
542
N
sing
N
543
N
sing
N
544
N
sing
N
545
N
sing
N
546
N
doub
N
547
N
sing
N
548
N
sing
N
549
N
sing
N
550
N
sing
N
551
N
sing
N
552
N
doub
N
553
N
sing
N
554
N
sing
N
555
N
sing
N
556
N
sing
N
557
N
doub
N
558
N
sing
N
559
N
sing
N
560
N
sing
N
561
N
sing
N
562
N
sing
N
563
N
sing
N
564
N
sing
N
565
N
sing
N
566
N
sing
N
567
N
sing
N
568
N
sing
N
569
N
sing
N
570
N
sing
N
571
N
sing
N
572
N
sing
N
573
N
sing
N
574
N
sing
Y
575
N
sing
Y
576
N
sing
Y
577
N
sing
Y
578
N
doub
Y
579
N
doub
Y
580
N
sing
N
581
N
sing
Y
582
N
doub
N
583
N
sing
Y
584
N
sing
N
585
N
sing
N
586
N
sing
Y
587
N
sing
Y
588
N
doub
N
589
N
sing
N
590
N
sing
N
591
N
sing
N
592
N
sing
N
593
N
sing
N
594
N
sing
N
595
N
sing
N
596
N
doub
N
597
N
sing
N
598
N
sing
N
599
N
sing
N
600
N
sing
Y
601
N
doub
Y
602
N
sing
Y
603
N
sing
N
604
N
sing
Y
605
N
doub
Y
606
N
sing
Y
607
N
sing
N
608
N
sing
Y
609
N
sing
Y
610
N
doub
N
611
N
sing
Y
612
N
doub
N
613
N
sing
Y
614
N
sing
N
615
N
sing
N
616
N
sing
N
617
N
sing
N
618
N
sing
N
619
N
sing
N
620
N
sing
N
621
N
sing
N
622
N
sing
N
623
N
sing
N
624
N
doub
N
625
N
sing
N
626
N
sing
N
627
N
sing
N
628
N
sing
Y
629
N
doub
Y
630
N
sing
Y
631
N
sing
N
632
N
sing
Y
633
N
doub
N
634
N
sing
Y
635
N
doub
N
636
N
sing
Y
637
N
sing
N
638
N
sing
N
639
N
sing
N
640
N
sing
N
641
N
sing
N
642
N
sing
N
643
N
sing
N
644
N
sing
N
645
N
sing
N
646
N
sing
N
647
N
sing
N
648
N
doub
N
649
N
sing
N
650
N
sing
N
651
N
sing
N
652
N
sing
N
653
N
sing
N
654
N
sing
N
655
N
sing
N
656
N
sing
N
657
N
sing
N
658
N
sing
N
659
N
sing
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
284
35092
35100
10.1074/jbc.M109.022525
19812032
Structural basis for the role of the K65r mutation in HIV-1 reverse transcriptase polymerization, excision antagonism, and tenofovir resistance.
2009
US
Nat.Struct.Mol.Biol.
1545-9993
11
469
15107837
Structures of HIV-1 RT-DNA Complexes Before and After Incorporation of the Anti-Aids Drug Tenofovir
2004
10.2210/pdb3jsm/pdb
pdb_00003jsm
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2007-06-17
ADSC QUANTUM 270
Horizontal bent Si(111)
SINGLE WAVELENGTH
M
x-ray
1
0.9179
1.0
F1
CHESS
0.9179
SYNCHROTRON
CHESS BEAMLINE F1
8383.385
DNA (5'-D(*A*TP*GP*GP*TP*CP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*CP*TP*GP*TP*G)-3')
1
syn
polymer
6474.268
DNA (5'-D(*A*CP*AP*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*(MRG)P*CP*GP*CP*CP*(DDG))-3')
1
syn
polymer
64277.676
HIV-1 REVERSE TRANSCRIPTASE P66 SUBUNIT
2.7.7.49
K65R, Q258C, C280S
1
man
polymer
51095.617
HIV-1 REVERSE TRANSCRIPTASE P51 SUBUNIT
2.7.7.49
C280S
1
man
polymer
447.172
[2-(6-AMINO-9H-PURIN-9-YL)-1-METHYLETHOXY]METHYL-TRIPHOSPHATE
1
syn
non-polymer
24.305
MAGNESIUM ION
2
syn
non-polymer
96.063
SULFATE ION
2
syn
non-polymer
18.015
water
1
nat
water
no
no
(DA)(DT)(DG)(DG)(DT)(DC)(DG)(DG)(DC)(DG)(DC)(DC)(DC)(DG)(DA)(DA)(DC)(DA)(DG)(DG)
(DG)(DA)(DC)(DT)(DG)(DT)(DG)
ATGGTCGGCGCCCGAACAGGGACTGTG
T
polydeoxyribonucleotide
no
yes
(DA)(DC)(DA)(DG)(DT)(DC)(DC)(DC)(DT)(DG)(DT)(DT)(DC)(DG)(DG)(MRG)(DC)(DG)(DC)
(DC)(DDG)
ACAGTCCCTGTTCGGGCGCCG
P
polydeoxyribonucleotide
no
no
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKRKDSTKWRKLVDFREL
NKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIF
QSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWT
VQPIVLPEKDSWTVNDICKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKEPVHGVYYD
PSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWET
WWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQ
AIYLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRK
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKRKDSTKWRKLVDFREL
NKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIF
QSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWT
VQPIVLPEKDSWTVNDICKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKEPVHGVYYD
PSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWET
WWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQ
AIYLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRK
A
polypeptide(L)
no
no
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFREL
NKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIF
QSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWT
VQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKEPVHGVYYD
PSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWET
WWTEYWQATWIPEWEFVNTPPLVKLWYQLGGHHHHHH
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFREL
NKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIF
QSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWT
VQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKEPVHGVYYD
PSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWET
WWTEYWQATWIPEWEFVNTPPLVKLWYQLGGHHHHHH
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
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n
n
n
n
n
n
n
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n
n
n
n
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n
n
n
n
n
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n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
HIV-1
BH10
sample
gag-pol, POL
11678
Human immunodeficiency virus type 1
562
Escherichia coli
DH5ALPHA
HIV-1
BH10
sample
gag-pol, POL
11678
Human immunodeficiency virus type 1
562
Escherichia coli
DH5ALPHA
1
5.00
75.38
VAPOR DIFFUSION, HANGING DROP
6.4
10% PEG 8000, 100 MM AMMONIUM SULFATE, 20 MM MGCL2, 5% GLYCEROL, 5% SUCROSE, pH 6.4, VAPOR DIFFUSION, HANGING DROP, temperature 277K
277
-10.594
1
19
T
706
P
822
4.230
T_DC706:DDG822_P
1
7.086
0.453
0.367
0.049
2.765
1
19
T
707
P
821
-0.427
T_DG707:DC821_P
2
-2.744
-0.426
-0.578
-0.102
15.355
1
19
T
708
P
820
3.350
T_DG708:DC820_P
3
-6.240
0.267
0.389
0.147
1.739
1
19
T
709
P
819
-1.759
T_DC709:DG819_P
4
-3.357
0.616
0.066
-0.300
-2.587
1
19
T
710
P
818
-0.855
T_DG710:DC818_P
5
-7.738
0.069
-0.188
-0.311
0.095
1
19
T
711
P
817
1.557
T_DC711:MRG817_P
6
-15.702
0.979
-0.253
-0.448
-2.648
1
19
T
712
P
816
1.176
T_DC712:DG816_P
7
-10.900
0.992
-0.025
-0.421
-8.107
1
T
713
P
815
15.618
T_DC713:DG815_P
8
-7.786
-0.249
0.784
0.358
13.230
1
19
T
714
P
814
3.550
T_DG714:DC814_P
9
-17.951
0.481
0.891
0.052
13.271
1
20
T
715
P
813
-0.248
T_DA715:DT813_P
10
-21.623
0.349
0.934
-0.196
22.131
1
20
T
716
P
812
3.171
T_DA716:DT812_P
11
-17.474
-0.184
0.843
-0.091
-1.325
1
19
T
717
P
811
-13.556
T_DC717:DG811_P
12
-20.979
0.094
0.361
-0.147
-11.236
1
20
T
718
P
810
9.272
T_DA718:DT810_P
13
-4.806
0.224
0.729
-0.118
0.074
1
19
T
719
P
809
1.359
T_DG719:DC809_P
14
-2.917
-0.510
0.660
-0.591
21.040
1
19
T
720
P
808
-17.045
T_DG720:DC808_P
15
-10.451
1.407
1.154
-0.442
7.431
1
19
T
721
P
807
-5.968
T_DG721:DC807_P
16
-22.440
0.108
0.846
-0.255
6.419
T
722
P
806
6.959
T_DA722:DT806_P
17
-18.306
0.095
0.776
0.175
15.032
1
T
723
P
805
11.333
T_DC723:DG805_P
18
-23.239
0.436
0.339
0.331
-45.386
T
725
P
803
16.279
T_DG725:DC803_P
19
-32.736
0.948
-1.862
0.742
1.993
29.616
T
T
706
707
25.411
P
P
822
821
2.843
12.560
-1.062
-1.059
TT_DC706DG707:DC821DDG822_PP
1
3.627
-7.339
26.633
-4.143
2.677
2.966
34.362
T
T
707
708
6.974
P
P
821
820
3.239
4.064
-0.127
-1.510
TT_DG707DG708:DC820DC821_PP
2
-9.146
15.696
32.915
-3.172
-1.173
2.869
34.162
T
T
708
709
22.974
P
P
820
819
3.648
13.162
-0.488
-1.301
TT_DG708DC709:DG819DC820_PP
3
1.491
-2.602
31.561
-4.378
1.075
3.089
32.999
T
T
709
710
11.808
P
P
819
818
3.457
6.661
-0.192
-1.466
TT_DC709DG710:DC818DG819_PP
4
1.591
-2.820
32.300
-3.725
0.611
3.311
36.384
T
T
710
711
9.042
P
P
818
817
3.486
5.619
-0.007
-0.831
TT_DG710DC711:MRG817DC818_PP
5
2.991
-4.814
35.842
-2.150
0.448
3.130
34.587
T
T
711
712
18.807
P
P
817
816
3.395
10.989
0.412
-0.381
TT_DC711DC712:DG816MRG817_PP
6
2.419
-4.139
32.758
-2.381
-0.310
3.247
28.902
T
T
712
713
9.215
P
P
816
815
3.426
4.577
0.707
-0.513
TT_DC712DC713:DG815DG816_PP
7
-2.075
4.178
28.471
-2.073
-1.890
2.791
35.934
T
T
713
714
-2.417
P
P
815
814
2.820
-1.490
-0.435
0.036
TT_DC713DG714:DC814DG815_PP
8
1.809
-2.934
35.860
0.240
0.927
3.267
34.898
T
T
714
715
-4.118
P
P
814
813
3.236
-2.467
-0.065
-0.619
TT_DG714DA715:DT813DC814_PP
9
1.105
-1.844
34.796
-0.661
0.275
3.002
34.120
T
T
715
716
-7.033
P
P
813
812
2.874
-4.108
0.706
-0.729
TT_DA715DA716:DT812DT813_PP
10
4.095
-7.011
33.638
-0.653
-0.616
3.627
33.412
T
T
716
717
7.870
P
P
812
811
3.838
4.511
-0.166
-1.308
TT_DA716DC717:DG811DT812_PP
11
0.962
-1.678
33.101
-3.131
0.471
3.136
37.297
T
T
717
718
8.665
P
P
811
810
3.387
5.519
0.559
-1.261
TT_DC717DA718:DT810DG811_PP
12
-2.127
3.338
36.842
-2.705
-1.156
3.298
24.563
T
T
718
719
-3.471
P
P
810
809
3.276
-1.475
-0.564
-0.969
TT_DA718DG719:DC809DT810_PP
13
1.142
-2.688
24.493
-1.821
1.681
2.743
44.116
T
T
719
720
-3.648
P
P
809
808
2.581
-2.723
-0.860
-0.920
TT_DG719DG720:DC808DC809_PP
14
-8.441
11.308
43.259
-1.014
0.493
3.153
30.728
T
T
720
721
13.306
P
P
808
807
3.438
6.975
0.140
-0.858
TT_DG720DG721:DC807DC808_PP
15
3.747
-7.148
29.714
-3.021
0.489
3.382
40.024
T
T
721
722
-9.874
P
P
807
806
3.270
-6.728
0.178
-0.958
TT_DG721DA722:DT806DC807_PP
16
0.188
-0.275
39.477
-0.610
-0.237
2.780
25.042
T
T
722
723
1.227
P
P
806
805
2.950
0.525
-0.114
-1.391
TT_DA722DC723:DG805DT806_PP
17
6.856
-16.012
24.094
-3.348
2.080
database_2
pdbx_struct_conn_angle
struct_conn
struct_ref_seq_dif
struct_site
chem_comp_atom
chem_comp_bond
pdbx_initial_refinement_model
repository
Initial release
Source and taxonomy
Version format compliance
Database references
Derived calculations
Data collection
Refinement description
1
0
2009-09-29
1
1
2011-07-13
1
2
2021-10-13
1
3
2023-09-06
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.conn_type_id
_struct_conn.id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Structural Basis for the Role of the K65R Mutation in HIV-1 Reverse
Transcriptase Polymerization, Excision Antagonism, and Tenofovir Resistance
RCSB
Y
RCSB
2009-09-10
REL
REL
TNV
[2-(6-AMINO-9H-PURIN-9-YL)-1-METHYLETHOXY]METHYL-TRIPHOSPHATE
MG
MAGNESIUM ION
SO4
SULFATE ION
HOH
water
Chemically modified with Thiol-DGMP and enzymatically terminated with DDGTP
sample
1T05
PDB ENTRY 1T05
PDB
experimental model
TNV
823
5
TNV
TNV
823
A
MG
600
6
MG
MG
600
A
MG
601
6
MG
MG
601
A
SO4
559
7
SO4
SO4
559
A
SO4
560
7
SO4
SO4
560
A
HOH
561
8
HOH
HOH
561
A
n
1
701
T
DT
702
n
2
DT
702
T
DG
703
n
3
DG
703
T
DG
704
n
4
DG
704
T
DT
705
n
5
DT
705
T
DC
706
n
6
DC
706
T
DG
707
n
7
DG
707
T
DG
708
n
8
DG
708
T
DC
709
n
9
DC
709
T
DG
710
n
10
DG
710
T
DC
711
n
11
DC
711
T
DC
712
n
12
DC
712
T
DC
713
n
13
DC
713
T
DG
714
n
14
DG
714
T
DA
715
n
15
DA
715
T
DA
716
n
16
DA
716
T
DC
717
n
17
DC
717
T
DA
718
n
18
DA
718
T
DG
719
n
19
DG
719
T
DG
720
n
20
DG
720
T
DG
721
n
21
DG
721
T
DA
722
n
22
DA
722
T
DC
723
n
23
DC
723
T
DT
724
n
24
DT
724
T
DG
725
n
25
DG
725
T
n
26
726
T
n
27
727
T
n
1
802
P
DC
803
n
2
DC
803
P
DA
804
n
3
DA
804
P
DG
805
n
4
DG
805
P
DT
806
n
5
DT
806
P
DC
807
n
6
DC
807
P
DC
808
n
7
DC
808
P
DC
809
n
8
DC
809
P
DT
810
n
9
DT
810
P
DG
811
n
10
DG
811
P
DT
812
n
11
DT
812
P
DT
813
n
12
DT
813
P
DC
814
n
13
DC
814
P
DG
815
n
14
DG
815
P
DG
816
n
15
DG
816
P
MRG
817
n
16
MRG
817
P
DC
818
n
17
DC
818
P
DG
819
n
18
DG
819
P
DC
820
n
19
DC
820
P
DC
821
n
20
DC
821
P
DDG
822
n
21
DDG
822
P
PRO
1
n
1
PRO
1
A
ILE
2
n
2
ILE
2
A
SER
3
n
3
SER
3
A
PRO
4
n
4
PRO
4
A
ILE
5
n
5
ILE
5
A
GLU
6
n
6
GLU
6
A
THR
7
n
7
THR
7
A
VAL
8
n
8
VAL
8
A
PRO
9
n
9
PRO
9
A
VAL
10
n
10
VAL
10
A
LYS
11
n
11
LYS
11
A
LEU
12
n
12
LEU
12
A
LYS
13
n
13
LYS
13
A
PRO
14
n
14
PRO
14
A
GLY
15
n
15
GLY
15
A
MET
16
n
16
MET
16
A
ASP
17
n
17
ASP
17
A
GLY
18
n
18
GLY
18
A
PRO
19
n
19
PRO
19
A
LYS
20
n
20
LYS
20
A
VAL
21
n
21
VAL
21
A
LYS
22
n
22
LYS
22
A
GLN
23
n
23
GLN
23
A
TRP
24
n
24
TRP
24
A
PRO
25
n
25
PRO
25
A
LEU
26
n
26
LEU
26
A
THR
27
n
27
THR
27
A
GLU
28
n
28
GLU
28
A
GLU
29
n
29
GLU
29
A
LYS
30
n
30
LYS
30
A
ILE
31
n
31
ILE
31
A
LYS
32
n
32
LYS
32
A
ALA
33
n
33
ALA
33
A
LEU
34
n
34
LEU
34
A
VAL
35
n
35
VAL
35
A
GLU
36
n
36
GLU
36
A
ILE
37
n
37
ILE
37
A
CYS
38
n
38
CYS
38
A
THR
39
n
39
THR
39
A
GLU
40
n
40
GLU
40
A
MET
41
n
41
MET
41
A
GLU
42
n
42
GLU
42
A
LYS
43
n
43
LYS
43
A
GLU
44
n
44
GLU
44
A
GLY
45
n
45
GLY
45
A
LYS
46
n
46
LYS
46
A
ILE
47
n
47
ILE
47
A
SER
48
n
48
SER
48
A
LYS
49
n
49
LYS
49
A
ILE
50
n
50
ILE
50
A
GLY
51
n
51
GLY
51
A
PRO
52
n
52
PRO
52
A
GLU
53
n
53
GLU
53
A
ASN
54
n
54
ASN
54
A
PRO
55
n
55
PRO
55
A
TYR
56
n
56
TYR
56
A
ASN
57
n
57
ASN
57
A
THR
58
n
58
THR
58
A
PRO
59
n
59
PRO
59
A
VAL
60
n
60
VAL
60
A
PHE
61
n
61
PHE
61
A
ALA
62
n
62
ALA
62
A
ILE
63
n
63
ILE
63
A
LYS
64
n
64
LYS
64
A
ARG
65
n
65
ARG
65
A
LYS
66
n
66
LYS
66
A
ASP
67
n
67
ASP
67
A
SER
68
n
68
SER
68
A
THR
69
n
69
THR
69
A
LYS
70
n
70
LYS
70
A
TRP
71
n
71
TRP
71
A
ARG
72
n
72
ARG
72
A
LYS
73
n
73
LYS
73
A
LEU
74
n
74
LEU
74
A
VAL
75
n
75
VAL
75
A
ASP
76
n
76
ASP
76
A
PHE
77
n
77
PHE
77
A
ARG
78
n
78
ARG
78
A
GLU
79
n
79
GLU
79
A
LEU
80
n
80
LEU
80
A
ASN
81
n
81
ASN
81
A
LYS
82
n
82
LYS
82
A
ARG
83
n
83
ARG
83
A
THR
84
n
84
THR
84
A
GLN
85
n
85
GLN
85
A
ASP
86
n
86
ASP
86
A
PHE
87
n
87
PHE
87
A
TRP
88
n
88
TRP
88
A
GLU
89
n
89
GLU
89
A
VAL
90
n
90
VAL
90
A
GLN
91
n
91
GLN
91
A
LEU
92
n
92
LEU
92
A
GLY
93
n
93
GLY
93
A
ILE
94
n
94
ILE
94
A
PRO
95
n
95
PRO
95
A
HIS
96
n
96
HIS
96
A
PRO
97
n
97
PRO
97
A
ALA
98
n
98
ALA
98
A
GLY
99
n
99
GLY
99
A
LEU
100
n
100
LEU
100
A
LYS
101
n
101
LYS
101
A
LYS
102
n
102
LYS
102
A
LYS
103
n
103
LYS
103
A
LYS
104
n
104
LYS
104
A
SER
105
n
105
SER
105
A
VAL
106
n
106
VAL
106
A
THR
107
n
107
THR
107
A
VAL
108
n
108
VAL
108
A
LEU
109
n
109
LEU
109
A
ASP
110
n
110
ASP
110
A
VAL
111
n
111
VAL
111
A
GLY
112
n
112
GLY
112
A
ASP
113
n
113
ASP
113
A
ALA
114
n
114
ALA
114
A
TYR
115
n
115
TYR
115
A
PHE
116
n
116
PHE
116
A
SER
117
n
117
SER
117
A
VAL
118
n
118
VAL
118
A
PRO
119
n
119
PRO
119
A
LEU
120
n
120
LEU
120
A
ASP
121
n
121
ASP
121
A
GLU
122
n
122
GLU
122
A
ASP
123
n
123
ASP
123
A
PHE
124
n
124
PHE
124
A
ARG
125
n
125
ARG
125
A
LYS
126
n
126
LYS
126
A
TYR
127
n
127
TYR
127
A
THR
128
n
128
THR
128
A
ALA
129
n
129
ALA
129
A
PHE
130
n
130
PHE
130
A
THR
131
n
131
THR
131
A
ILE
132
n
132
ILE
132
A
PRO
133
n
133
PRO
133
A
SER
134
n
134
SER
134
A
ILE
135
n
135
ILE
135
A
ASN
136
n
136
ASN
136
A
ASN
137
n
137
ASN
137
A
GLU
138
n
138
GLU
138
A
THR
139
n
139
THR
139
A
PRO
140
n
140
PRO
140
A
GLY
141
n
141
GLY
141
A
ILE
142
n
142
ILE
142
A
ARG
143
n
143
ARG
143
A
TYR
144
n
144
TYR
144
A
GLN
145
n
145
GLN
145
A
TYR
146
n
146
TYR
146
A
ASN
147
n
147
ASN
147
A
VAL
148
n
148
VAL
148
A
LEU
149
n
149
LEU
149
A
PRO
150
n
150
PRO
150
A
GLN
151
n
151
GLN
151
A
GLY
152
n
152
GLY
152
A
TRP
153
n
153
TRP
153
A
LYS
154
n
154
LYS
154
A
GLY
155
n
155
GLY
155
A
SER
156
n
156
SER
156
A
PRO
157
n
157
PRO
157
A
ALA
158
n
158
ALA
158
A
ILE
159
n
159
ILE
159
A
PHE
160
n
160
PHE
160
A
GLN
161
n
161
GLN
161
A
SER
162
n
162
SER
162
A
SER
163
n
163
SER
163
A
MET
164
n
164
MET
164
A
THR
165
n
165
THR
165
A
LYS
166
n
166
LYS
166
A
ILE
167
n
167
ILE
167
A
LEU
168
n
168
LEU
168
A
GLU
169
n
169
GLU
169
A
PRO
170
n
170
PRO
170
A
PHE
171
n
171
PHE
171
A
LYS
172
n
172
LYS
172
A
LYS
173
n
173
LYS
173
A
GLN
174
n
174
GLN
174
A
ASN
175
n
175
ASN
175
A
PRO
176
n
176
PRO
176
A
ASP
177
n
177
ASP
177
A
ILE
178
n
178
ILE
178
A
VAL
179
n
179
VAL
179
A
ILE
180
n
180
ILE
180
A
TYR
181
n
181
TYR
181
A
GLN
182
n
182
GLN
182
A
TYR
183
n
183
TYR
183
A
MET
184
n
184
MET
184
A
ASP
185
n
185
ASP
185
A
ASP
186
n
186
ASP
186
A
LEU
187
n
187
LEU
187
A
TYR
188
n
188
TYR
188
A
VAL
189
n
189
VAL
189
A
GLY
190
n
190
GLY
190
A
SER
191
n
191
SER
191
A
ASP
192
n
192
ASP
192
A
LEU
193
n
193
LEU
193
A
GLU
194
n
194
GLU
194
A
ILE
195
n
195
ILE
195
A
GLY
196
n
196
GLY
196
A
GLN
197
n
197
GLN
197
A
HIS
198
n
198
HIS
198
A
ARG
199
n
199
ARG
199
A
THR
200
n
200
THR
200
A
LYS
201
n
201
LYS
201
A
ILE
202
n
202
ILE
202
A
GLU
203
n
203
GLU
203
A
GLU
204
n
204
GLU
204
A
LEU
205
n
205
LEU
205
A
ARG
206
n
206
ARG
206
A
GLN
207
n
207
GLN
207
A
HIS
208
n
208
HIS
208
A
LEU
209
n
209
LEU
209
A
LEU
210
n
210
LEU
210
A
ARG
211
n
211
ARG
211
A
TRP
212
n
212
TRP
212
A
GLY
213
n
213
GLY
213
A
LEU
214
n
214
LEU
214
A
THR
215
n
215
THR
215
A
THR
216
n
216
THR
216
A
PRO
217
n
217
PRO
217
A
ASP
218
n
218
ASP
218
A
LYS
219
n
219
LYS
219
A
LYS
220
n
220
LYS
220
A
HIS
221
n
221
HIS
221
A
GLN
222
n
222
GLN
222
A
LYS
223
n
223
LYS
223
A
GLU
224
n
224
GLU
224
A
PRO
225
n
225
PRO
225
A
PRO
226
n
226
PRO
226
A
PHE
227
n
227
PHE
227
A
LEU
228
n
228
LEU
228
A
TRP
229
n
229
TRP
229
A
MET
230
n
230
MET
230
A
GLY
231
n
231
GLY
231
A
TYR
232
n
232
TYR
232
A
GLU
233
n
233
GLU
233
A
LEU
234
n
234
LEU
234
A
HIS
235
n
235
HIS
235
A
PRO
236
n
236
PRO
236
A
ASP
237
n
237
ASP
237
A
LYS
238
n
238
LYS
238
A
TRP
239
n
239
TRP
239
A
THR
240
n
240
THR
240
A
VAL
241
n
241
VAL
241
A
GLN
242
n
242
GLN
242
A
PRO
243
n
243
PRO
243
A
ILE
244
n
244
ILE
244
A
VAL
245
n
245
VAL
245
A
LEU
246
n
246
LEU
246
A
PRO
247
n
247
PRO
247
A
GLU
248
n
248
GLU
248
A
LYS
249
n
249
LYS
249
A
ASP
250
n
250
ASP
250
A
SER
251
n
251
SER
251
A
TRP
252
n
252
TRP
252
A
THR
253
n
253
THR
253
A
VAL
254
n
254
VAL
254
A
ASN
255
n
255
ASN
255
A
ASP
256
n
256
ASP
256
A
ILE
257
n
257
ILE
257
A
CYS
258
n
258
CYS
258
A
LYS
259
n
259
LYS
259
A
LEU
260
n
260
LEU
260
A
VAL
261
n
261
VAL
261
A
GLY
262
n
262
GLY
262
A
LYS
263
n
263
LYS
263
A
LEU
264
n
264
LEU
264
A
ASN
265
n
265
ASN
265
A
TRP
266
n
266
TRP
266
A
ALA
267
n
267
ALA
267
A
SER
268
n
268
SER
268
A
GLN
269
n
269
GLN
269
A
ILE
270
n
270
ILE
270
A
TYR
271
n
271
TYR
271
A
PRO
272
n
272
PRO
272
A
GLY
273
n
273
GLY
273
A
ILE
274
n
274
ILE
274
A
LYS
275
n
275
LYS
275
A
VAL
276
n
276
VAL
276
A
ARG
277
n
277
ARG
277
A
GLN
278
n
278
GLN
278
A
LEU
279
n
279
LEU
279
A
SER
280
n
280
SER
280
A
LYS
281
n
281
LYS
281
A
LEU
282
n
282
LEU
282
A
LEU
283
n
283
LEU
283
A
ARG
284
n
284
ARG
284
A
GLY
285
n
285
GLY
285
A
THR
286
n
286
THR
286
A
LYS
287
n
287
LYS
287
A
ALA
288
n
288
ALA
288
A
LEU
289
n
289
LEU
289
A
THR
290
n
290
THR
290
A
GLU
291
n
291
GLU
291
A
VAL
292
n
292
VAL
292
A
ILE
293
n
293
ILE
293
A
PRO
294
n
294
PRO
294
A
LEU
295
n
295
LEU
295
A
THR
296
n
296
THR
296
A
GLU
297
n
297
GLU
297
A
GLU
298
n
298
GLU
298
A
ALA
299
n
299
ALA
299
A
GLU
300
n
300
GLU
300
A
LEU
301
n
301
LEU
301
A
GLU
302
n
302
GLU
302
A
LEU
303
n
303
LEU
303
A
ALA
304
n
304
ALA
304
A
GLU
305
n
305
GLU
305
A
ASN
306
n
306
ASN
306
A
ARG
307
n
307
ARG
307
A
GLU
308
n
308
GLU
308
A
ILE
309
n
309
ILE
309
A
LEU
310
n
310
LEU
310
A
LYS
311
n
311
LYS
311
A
GLU
312
n
312
GLU
312
A
PRO
313
n
313
PRO
313
A
VAL
314
n
314
VAL
314
A
HIS
315
n
315
HIS
315
A
GLY
316
n
316
GLY
316
A
VAL
317
n
317
VAL
317
A
TYR
318
n
318
TYR
318
A
TYR
319
n
319
TYR
319
A
ASP
320
n
320
ASP
320
A
PRO
321
n
321
PRO
321
A
SER
322
n
322
SER
322
A
LYS
323
n
323
LYS
323
A
ASP
324
n
324
ASP
324
A
LEU
325
n
325
LEU
325
A
ILE
326
n
326
ILE
326
A
ALA
327
n
327
ALA
327
A
GLU
328
n
328
GLU
328
A
ILE
329
n
329
ILE
329
A
GLN
330
n
330
GLN
330
A
LYS
331
n
331
LYS
331
A
GLN
332
n
332
GLN
332
A
GLY
333
n
333
GLY
333
A
GLN
334
n
334
GLN
334
A
GLY
335
n
335
GLY
335
A
GLN
336
n
336
GLN
336
A
TRP
337
n
337
TRP
337
A
THR
338
n
338
THR
338
A
TYR
339
n
339
TYR
339
A
GLN
340
n
340
GLN
340
A
ILE
341
n
341
ILE
341
A
TYR
342
n
342
TYR
342
A
GLN
343
n
343
GLN
343
A
GLU
344
n
344
GLU
344
A
PRO
345
n
345
PRO
345
A
PHE
346
n
346
PHE
346
A
LYS
347
n
347
LYS
347
A
ASN
348
n
348
ASN
348
A
LEU
349
n
349
LEU
349
A
LYS
350
n
350
LYS
350
A
THR
351
n
351
THR
351
A
GLY
352
n
352
GLY
352
A
LYS
353
n
353
LYS
353
A
TYR
354
n
354
TYR
354
A
ALA
355
n
355
ALA
355
A
ARG
356
n
356
ARG
356
A
MET
357
n
357
MET
357
A
ARG
358
n
358
ARG
358
A
GLY
359
n
359
GLY
359
A
ALA
360
n
360
ALA
360
A
HIS
361
n
361
HIS
361
A
THR
362
n
362
THR
362
A
ASN
363
n
363
ASN
363
A
ASP
364
n
364
ASP
364
A
VAL
365
n
365
VAL
365
A
LYS
366
n
366
LYS
366
A
GLN
367
n
367
GLN
367
A
LEU
368
n
368
LEU
368
A
THR
369
n
369
THR
369
A
GLU
370
n
370
GLU
370
A
ALA
371
n
371
ALA
371
A
VAL
372
n
372
VAL
372
A
GLN
373
n
373
GLN
373
A
LYS
374
n
374
LYS
374
A
ILE
375
n
375
ILE
375
A
THR
376
n
376
THR
376
A
THR
377
n
377
THR
377
A
GLU
378
n
378
GLU
378
A
SER
379
n
379
SER
379
A
ILE
380
n
380
ILE
380
A
VAL
381
n
381
VAL
381
A
ILE
382
n
382
ILE
382
A
TRP
383
n
383
TRP
383
A
GLY
384
n
384
GLY
384
A
LYS
385
n
385
LYS
385
A
THR
386
n
386
THR
386
A
PRO
387
n
387
PRO
387
A
LYS
388
n
388
LYS
388
A
PHE
389
n
389
PHE
389
A
LYS
390
n
390
LYS
390
A
LEU
391
n
391
LEU
391
A
PRO
392
n
392
PRO
392
A
ILE
393
n
393
ILE
393
A
GLN
394
n
394
GLN
394
A
LYS
395
n
395
LYS
395
A
GLU
396
n
396
GLU
396
A
THR
397
n
397
THR
397
A
TRP
398
n
398
TRP
398
A
GLU
399
n
399
GLU
399
A
THR
400
n
400
THR
400
A
TRP
401
n
401
TRP
401
A
TRP
402
n
402
TRP
402
A
THR
403
n
403
THR
403
A
GLU
404
n
404
GLU
404
A
TYR
405
n
405
TYR
405
A
TRP
406
n
406
TRP
406
A
GLN
407
n
407
GLN
407
A
ALA
408
n
408
ALA
408
A
THR
409
n
409
THR
409
A
TRP
410
n
410
TRP
410
A
ILE
411
n
411
ILE
411
A
PRO
412
n
412
PRO
412
A
GLU
413
n
413
GLU
413
A
TRP
414
n
414
TRP
414
A
GLU
415
n
415
GLU
415
A
PHE
416
n
416
PHE
416
A
VAL
417
n
417
VAL
417
A
ASN
418
n
418
ASN
418
A
THR
419
n
419
THR
419
A
PRO
420
n
420
PRO
420
A
PRO
421
n
421
PRO
421
A
LEU
422
n
422
LEU
422
A
VAL
423
n
423
VAL
423
A
LYS
424
n
424
LYS
424
A
LEU
425
n
425
LEU
425
A
TRP
426
n
426
TRP
426
A
TYR
427
n
427
TYR
427
A
GLN
428
n
428
GLN
428
A
LEU
429
n
429
LEU
429
A
GLU
430
n
430
GLU
430
A
LYS
431
n
431
LYS
431
A
GLU
432
n
432
GLU
432
A
PRO
433
n
433
PRO
433
A
ILE
434
n
434
ILE
434
A
VAL
435
n
435
VAL
435
A
GLY
436
n
436
GLY
436
A
ALA
437
n
437
ALA
437
A
GLU
438
n
438
GLU
438
A
THR
439
n
439
THR
439
A
PHE
440
n
440
PHE
440
A
TYR
441
n
441
TYR
441
A
VAL
442
n
442
VAL
442
A
ASP
443
n
443
ASP
443
A
GLY
444
n
444
GLY
444
A
ALA
445
n
445
ALA
445
A
ALA
446
n
446
ALA
446
A
ASN
447
n
447
ASN
447
A
ARG
448
n
448
ARG
448
A
GLU
449
n
449
GLU
449
A
THR
450
n
450
THR
450
A
LYS
451
n
451
LYS
451
A
LEU
452
n
452
LEU
452
A
GLY
453
n
453
GLY
453
A
LYS
454
n
454
LYS
454
A
ALA
455
n
455
ALA
455
A
GLY
456
n
456
GLY
456
A
TYR
457
n
457
TYR
457
A
VAL
458
n
458
VAL
458
A
THR
459
n
459
THR
459
A
ASN
460
n
460
ASN
460
A
LYS
461
n
461
LYS
461
A
GLY
462
n
462
GLY
462
A
ARG
463
n
463
ARG
463
A
GLN
464
n
464
GLN
464
A
LYS
465
n
465
LYS
465
A
VAL
466
n
466
VAL
466
A
VAL
467
n
467
VAL
467
A
PRO
468
n
468
PRO
468
A
LEU
469
n
469
LEU
469
A
THR
470
n
470
THR
470
A
ASN
471
n
471
ASN
471
A
THR
472
n
472
THR
472
A
THR
473
n
473
THR
473
A
ASN
474
n
474
ASN
474
A
GLN
475
n
475
GLN
475
A
LYS
476
n
476
LYS
476
A
THR
477
n
477
THR
477
A
GLU
478
n
478
GLU
478
A
LEU
479
n
479
LEU
479
A
GLN
480
n
480
GLN
480
A
ALA
481
n
481
ALA
481
A
ILE
482
n
482
ILE
482
A
TYR
483
n
483
TYR
483
A
LEU
484
n
484
LEU
484
A
ALA
485
n
485
ALA
485
A
LEU
486
n
486
LEU
486
A
GLN
487
n
487
GLN
487
A
ASP
488
n
488
ASP
488
A
SER
489
n
489
SER
489
A
GLY
490
n
490
GLY
490
A
LEU
491
n
491
LEU
491
A
GLU
492
n
492
GLU
492
A
VAL
493
n
493
VAL
493
A
ASN
494
n
494
ASN
494
A
ILE
495
n
495
ILE
495
A
VAL
496
n
496
VAL
496
A
THR
497
n
497
THR
497
A
ASP
498
n
498
ASP
498
A
SER
499
n
499
SER
499
A
GLN
500
n
500
GLN
500
A
TYR
501
n
501
TYR
501
A
ALA
502
n
502
ALA
502
A
LEU
503
n
503
LEU
503
A
GLY
504
n
504
GLY
504
A
ILE
505
n
505
ILE
505
A
ILE
506
n
506
ILE
506
A
GLN
507
n
507
GLN
507
A
ALA
508
n
508
ALA
508
A
GLN
509
n
509
GLN
509
A
PRO
510
n
510
PRO
510
A
ASP
511
n
511
ASP
511
A
LYS
512
n
512
LYS
512
A
SER
513
n
513
SER
513
A
GLU
514
n
514
GLU
514
A
SER
515
n
515
SER
515
A
GLU
516
n
516
GLU
516
A
LEU
517
n
517
LEU
517
A
VAL
518
n
518
VAL
518
A
ASN
519
n
519
ASN
519
A
GLN
520
n
520
GLN
520
A
ILE
521
n
521
ILE
521
A
ILE
522
n
522
ILE
522
A
GLU
523
n
523
GLU
523
A
GLN
524
n
524
GLN
524
A
LEU
525
n
525
LEU
525
A
ILE
526
n
526
ILE
526
A
LYS
527
n
527
LYS
527
A
LYS
528
n
528
LYS
528
A
GLU
529
n
529
GLU
529
A
LYS
530
n
530
LYS
530
A
VAL
531
n
531
VAL
531
A
TYR
532
n
532
TYR
532
A
LEU
533
n
533
LEU
533
A
ALA
534
n
534
ALA
534
A
TRP
535
n
535
TRP
535
A
VAL
536
n
536
VAL
536
A
PRO
537
n
537
PRO
537
A
ALA
538
n
538
ALA
538
A
HIS
539
n
539
HIS
539
A
LYS
540
n
540
LYS
540
A
GLY
541
n
541
GLY
541
A
ILE
542
n
542
ILE
542
A
GLY
543
n
543
GLY
543
A
GLY
544
n
544
GLY
544
A
ASN
545
n
545
ASN
545
A
GLU
546
n
546
GLU
546
A
GLN
547
n
547
GLN
547
A
VAL
548
n
548
VAL
548
A
ASP
549
n
549
ASP
549
A
LYS
550
n
550
LYS
550
A
LEU
551
n
551
LEU
551
A
VAL
552
n
552
VAL
552
A
SER
553
n
553
SER
553
A
ALA
554
n
554
ALA
554
A
n
555
555
A
n
556
556
A
n
557
557
A
n
558
558
A
n
1
1
B
n
2
2
B
SER
3
n
3
SER
3
B
PRO
4
n
4
PRO
4
B
ILE
5
n
5
ILE
5
B
GLU
6
n
6
GLU
6
B
THR
7
n
7
THR
7
B
VAL
8
n
8
VAL
8
B
PRO
9
n
9
PRO
9
B
VAL
10
n
10
VAL
10
B
LYS
11
n
11
LYS
11
B
LEU
12
n
12
LEU
12
B
LYS
13
n
13
LYS
13
B
PRO
14
n
14
PRO
14
B
GLY
15
n
15
GLY
15
B
MET
16
n
16
MET
16
B
ASP
17
n
17
ASP
17
B
GLY
18
n
18
GLY
18
B
PRO
19
n
19
PRO
19
B
LYS
20
n
20
LYS
20
B
VAL
21
n
21
VAL
21
B
LYS
22
n
22
LYS
22
B
GLN
23
n
23
GLN
23
B
TRP
24
n
24
TRP
24
B
PRO
25
n
25
PRO
25
B
LEU
26
n
26
LEU
26
B
THR
27
n
27
THR
27
B
GLU
28
n
28
GLU
28
B
GLU
29
n
29
GLU
29
B
LYS
30
n
30
LYS
30
B
ILE
31
n
31
ILE
31
B
LYS
32
n
32
LYS
32
B
ALA
33
n
33
ALA
33
B
LEU
34
n
34
LEU
34
B
VAL
35
n
35
VAL
35
B
GLU
36
n
36
GLU
36
B
ILE
37
n
37
ILE
37
B
CYS
38
n
38
CYS
38
B
THR
39
n
39
THR
39
B
GLU
40
n
40
GLU
40
B
MET
41
n
41
MET
41
B
GLU
42
n
42
GLU
42
B
LYS
43
n
43
LYS
43
B
GLU
44
n
44
GLU
44
B
GLY
45
n
45
GLY
45
B
LYS
46
n
46
LYS
46
B
ILE
47
n
47
ILE
47
B
SER
48
n
48
SER
48
B
LYS
49
n
49
LYS
49
B
ILE
50
n
50
ILE
50
B
GLY
51
n
51
GLY
51
B
PRO
52
n
52
PRO
52
B
GLU
53
n
53
GLU
53
B
ASN
54
n
54
ASN
54
B
PRO
55
n
55
PRO
55
B
TYR
56
n
56
TYR
56
B
ASN
57
n
57
ASN
57
B
THR
58
n
58
THR
58
B
PRO
59
n
59
PRO
59
B
VAL
60
n
60
VAL
60
B
PHE
61
n
61
PHE
61
B
ALA
62
n
62
ALA
62
B
ILE
63
n
63
ILE
63
B
LYS
64
n
64
LYS
64
B
LYS
65
n
65
LYS
65
B
LYS
66
n
66
LYS
66
B
ASP
67
n
67
ASP
67
B
SER
68
n
68
SER
68
B
THR
69
n
69
THR
69
B
LYS
70
n
70
LYS
70
B
TRP
71
n
71
TRP
71
B
ARG
72
n
72
ARG
72
B
LYS
73
n
73
LYS
73
B
LEU
74
n
74
LEU
74
B
VAL
75
n
75
VAL
75
B
ASP
76
n
76
ASP
76
B
PHE
77
n
77
PHE
77
B
ARG
78
n
78
ARG
78
B
GLU
79
n
79
GLU
79
B
LEU
80
n
80
LEU
80
B
ASN
81
n
81
ASN
81
B
LYS
82
n
82
LYS
82
B
ARG
83
n
83
ARG
83
B
THR
84
n
84
THR
84
B
GLN
85
n
85
GLN
85
B
ASP
86
n
86
ASP
86
B
PHE
87
n
87
PHE
87
B
TRP
88
n
88
TRP
88
B
GLU
89
n
89
GLU
89
B
VAL
90
n
90
VAL
90
B
GLN
91
n
91
GLN
91
B
LEU
92
n
92
LEU
92
B
GLY
93
n
93
GLY
93
B
ILE
94
n
94
ILE
94
B
PRO
95
n
95
PRO
95
B
HIS
96
n
96
HIS
96
B
PRO
97
n
97
PRO
97
B
ALA
98
n
98
ALA
98
B
GLY
99
n
99
GLY
99
B
LEU
100
n
100
LEU
100
B
LYS
101
n
101
LYS
101
B
LYS
102
n
102
LYS
102
B
LYS
103
n
103
LYS
103
B
LYS
104
n
104
LYS
104
B
SER
105
n
105
SER
105
B
VAL
106
n
106
VAL
106
B
THR
107
n
107
THR
107
B
VAL
108
n
108
VAL
108
B
LEU
109
n
109
LEU
109
B
ASP
110
n
110
ASP
110
B
VAL
111
n
111
VAL
111
B
GLY
112
n
112
GLY
112
B
ASP
113
n
113
ASP
113
B
ALA
114
n
114
ALA
114
B
TYR
115
n
115
TYR
115
B
PHE
116
n
116
PHE
116
B
SER
117
n
117
SER
117
B
VAL
118
n
118
VAL
118
B
PRO
119
n
119
PRO
119
B
LEU
120
n
120
LEU
120
B
ASP
121
n
121
ASP
121
B
GLU
122
n
122
GLU
122
B
ASP
123
n
123
ASP
123
B
PHE
124
n
124
PHE
124
B
ARG
125
n
125
ARG
125
B
LYS
126
n
126
LYS
126
B
TYR
127
n
127
TYR
127
B
THR
128
n
128
THR
128
B
ALA
129
n
129
ALA
129
B
PHE
130
n
130
PHE
130
B
THR
131
n
131
THR
131
B
ILE
132
n
132
ILE
132
B
PRO
133
n
133
PRO
133
B
SER
134
n
134
SER
134
B
ILE
135
n
135
ILE
135
B
ASN
136
n
136
ASN
136
B
ASN
137
n
137
ASN
137
B
GLU
138
n
138
GLU
138
B
THR
139
n
139
THR
139
B
PRO
140
n
140
PRO
140
B
GLY
141
n
141
GLY
141
B
ILE
142
n
142
ILE
142
B
ARG
143
n
143
ARG
143
B
TYR
144
n
144
TYR
144
B
GLN
145
n
145
GLN
145
B
TYR
146
n
146
TYR
146
B
ASN
147
n
147
ASN
147
B
VAL
148
n
148
VAL
148
B
LEU
149
n
149
LEU
149
B
PRO
150
n
150
PRO
150
B
GLN
151
n
151
GLN
151
B
GLY
152
n
152
GLY
152
B
TRP
153
n
153
TRP
153
B
LYS
154
n
154
LYS
154
B
GLY
155
n
155
GLY
155
B
SER
156
n
156
SER
156
B
PRO
157
n
157
PRO
157
B
ALA
158
n
158
ALA
158
B
ILE
159
n
159
ILE
159
B
PHE
160
n
160
PHE
160
B
GLN
161
n
161
GLN
161
B
SER
162
n
162
SER
162
B
SER
163
n
163
SER
163
B
MET
164
n
164
MET
164
B
THR
165
n
165
THR
165
B
LYS
166
n
166
LYS
166
B
ILE
167
n
167
ILE
167
B
LEU
168
n
168
LEU
168
B
GLU
169
n
169
GLU
169
B
PRO
170
n
170
PRO
170
B
PHE
171
n
171
PHE
171
B
LYS
172
n
172
LYS
172
B
LYS
173
n
173
LYS
173
B
GLN
174
n
174
GLN
174
B
ASN
175
n
175
ASN
175
B
PRO
176
n
176
PRO
176
B
ASP
177
n
177
ASP
177
B
ILE
178
n
178
ILE
178
B
VAL
179
n
179
VAL
179
B
ILE
180
n
180
ILE
180
B
TYR
181
n
181
TYR
181
B
GLN
182
n
182
GLN
182
B
TYR
183
n
183
TYR
183
B
MET
184
n
184
MET
184
B
ASP
185
n
185
ASP
185
B
ASP
186
n
186
ASP
186
B
LEU
187
n
187
LEU
187
B
TYR
188
n
188
TYR
188
B
VAL
189
n
189
VAL
189
B
GLY
190
n
190
GLY
190
B
SER
191
n
191
SER
191
B
ASP
192
n
192
ASP
192
B
LEU
193
n
193
LEU
193
B
GLU
194
n
194
GLU
194
B
ILE
195
n
195
ILE
195
B
GLY
196
n
196
GLY
196
B
GLN
197
n
197
GLN
197
B
HIS
198
n
198
HIS
198
B
ARG
199
n
199
ARG
199
B
THR
200
n
200
THR
200
B
LYS
201
n
201
LYS
201
B
ILE
202
n
202
ILE
202
B
GLU
203
n
203
GLU
203
B
GLU
204
n
204
GLU
204
B
LEU
205
n
205
LEU
205
B
ARG
206
n
206
ARG
206
B
GLN
207
n
207
GLN
207
B
HIS
208
n
208
HIS
208
B
LEU
209
n
209
LEU
209
B
LEU
210
n
210
LEU
210
B
ARG
211
n
211
ARG
211
B
TRP
212
n
212
TRP
212
B
GLY
213
n
213
GLY
213
B
LEU
214
n
214
LEU
214
B
THR
215
n
215
THR
215
B
THR
216
n
216
THR
216
B
PRO
217
n
217
PRO
217
B
n
218
218
B
n
219
219
B
n
220
220
B
n
221
221
B
n
222
222
B
n
223
223
B
n
224
224
B
n
225
225
B
n
226
226
B
n
227
227
B
n
228
228
B
n
229
229
B
n
230
230
B
GLY
231
n
231
GLY
231
B
TYR
232
n
232
TYR
232
B
GLU
233
n
233
GLU
233
B
LEU
234
n
234
LEU
234
B
HIS
235
n
235
HIS
235
B
PRO
236
n
236
PRO
236
B
ASP
237
n
237
ASP
237
B
LYS
238
n
238
LYS
238
B
TRP
239
n
239
TRP
239
B
THR
240
n
240
THR
240
B
VAL
241
n
241
VAL
241
B
GLN
242
n
242
GLN
242
B
PRO
243
n
243
PRO
243
B
ILE
244
n
244
ILE
244
B
VAL
245
n
245
VAL
245
B
LEU
246
n
246
LEU
246
B
PRO
247
n
247
PRO
247
B
GLU
248
n
248
GLU
248
B
LYS
249
n
249
LYS
249
B
ASP
250
n
250
ASP
250
B
SER
251
n
251
SER
251
B
TRP
252
n
252
TRP
252
B
THR
253
n
253
THR
253
B
VAL
254
n
254
VAL
254
B
ASN
255
n
255
ASN
255
B
ASP
256
n
256
ASP
256
B
ILE
257
n
257
ILE
257
B
GLN
258
n
258
GLN
258
B
LYS
259
n
259
LYS
259
B
LEU
260
n
260
LEU
260
B
VAL
261
n
261
VAL
261
B
GLY
262
n
262
GLY
262
B
LYS
263
n
263
LYS
263
B
LEU
264
n
264
LEU
264
B
ASN
265
n
265
ASN
265
B
TRP
266
n
266
TRP
266
B
ALA
267
n
267
ALA
267
B
SER
268
n
268
SER
268
B
GLN
269
n
269
GLN
269
B
ILE
270
n
270
ILE
270
B
TYR
271
n
271
TYR
271
B
PRO
272
n
272
PRO
272
B
GLY
273
n
273
GLY
273
B
ILE
274
n
274
ILE
274
B
LYS
275
n
275
LYS
275
B
VAL
276
n
276
VAL
276
B
ARG
277
n
277
ARG
277
B
GLN
278
n
278
GLN
278
B
LEU
279
n
279
LEU
279
B
SER
280
n
280
SER
280
B
LYS
281
n
281
LYS
281
B
LEU
282
n
282
LEU
282
B
LEU
283
n
283
LEU
283
B
ARG
284
n
284
ARG
284
B
GLY
285
n
285
GLY
285
B
THR
286
n
286
THR
286
B
LYS
287
n
287
LYS
287
B
ALA
288
n
288
ALA
288
B
LEU
289
n
289
LEU
289
B
THR
290
n
290
THR
290
B
GLU
291
n
291
GLU
291
B
VAL
292
n
292
VAL
292
B
ILE
293
n
293
ILE
293
B
PRO
294
n
294
PRO
294
B
LEU
295
n
295
LEU
295
B
THR
296
n
296
THR
296
B
GLU
297
n
297
GLU
297
B
GLU
298
n
298
GLU
298
B
ALA
299
n
299
ALA
299
B
GLU
300
n
300
GLU
300
B
LEU
301
n
301
LEU
301
B
GLU
302
n
302
GLU
302
B
LEU
303
n
303
LEU
303
B
ALA
304
n
304
ALA
304
B
GLU
305
n
305
GLU
305
B
ASN
306
n
306
ASN
306
B
ARG
307
n
307
ARG
307
B
GLU
308
n
308
GLU
308
B
ILE
309
n
309
ILE
309
B
LEU
310
n
310
LEU
310
B
LYS
311
n
311
LYS
311
B
GLU
312
n
312
GLU
312
B
PRO
313
n
313
PRO
313
B
VAL
314
n
314
VAL
314
B
HIS
315
n
315
HIS
315
B
GLY
316
n
316
GLY
316
B
VAL
317
n
317
VAL
317
B
TYR
318
n
318
TYR
318
B
TYR
319
n
319
TYR
319
B
ASP
320
n
320
ASP
320
B
PRO
321
n
321
PRO
321
B
SER
322
n
322
SER
322
B
LYS
323
n
323
LYS
323
B
ASP
324
n
324
ASP
324
B
LEU
325
n
325
LEU
325
B
ILE
326
n
326
ILE
326
B
ALA
327
n
327
ALA
327
B
GLU
328
n
328
GLU
328
B
ILE
329
n
329
ILE
329
B
GLN
330
n
330
GLN
330
B
LYS
331
n
331
LYS
331
B
GLN
332
n
332
GLN
332
B
GLY
333
n
333
GLY
333
B
GLN
334
n
334
GLN
334
B
GLY
335
n
335
GLY
335
B
GLN
336
n
336
GLN
336
B
TRP
337
n
337
TRP
337
B
THR
338
n
338
THR
338
B
TYR
339
n
339
TYR
339
B
GLN
340
n
340
GLN
340
B
ILE
341
n
341
ILE
341
B
TYR
342
n
342
TYR
342
B
GLN
343
n
343
GLN
343
B
GLU
344
n
344
GLU
344
B
PRO
345
n
345
PRO
345
B
PHE
346
n
346
PHE
346
B
LYS
347
n
347
LYS
347
B
ASN
348
n
348
ASN
348
B
LEU
349
n
349
LEU
349
B
LYS
350
n
350
LYS
350
B
THR
351
n
351
THR
351
B
GLY
352
n
352
GLY
352
B
LYS
353
n
353
LYS
353
B
TYR
354
n
354
TYR
354
B
ALA
355
n
355
ALA
355
B
ARG
356
n
356
ARG
356
B
MET
357
n
357
MET
357
B
ARG
358
n
358
ARG
358
B
GLY
359
n
359
GLY
359
B
ALA
360
n
360
ALA
360
B
HIS
361
n
361
HIS
361
B
THR
362
n
362
THR
362
B
ASN
363
n
363
ASN
363
B
ASP
364
n
364
ASP
364
B
VAL
365
n
365
VAL
365
B
LYS
366
n
366
LYS
366
B
GLN
367
n
367
GLN
367
B
LEU
368
n
368
LEU
368
B
THR
369
n
369
THR
369
B
GLU
370
n
370
GLU
370
B
ALA
371
n
371
ALA
371
B
VAL
372
n
372
VAL
372
B
GLN
373
n
373
GLN
373
B
LYS
374
n
374
LYS
374
B
ILE
375
n
375
ILE
375
B
THR
376
n
376
THR
376
B
THR
377
n
377
THR
377
B
GLU
378
n
378
GLU
378
B
SER
379
n
379
SER
379
B
ILE
380
n
380
ILE
380
B
VAL
381
n
381
VAL
381
B
ILE
382
n
382
ILE
382
B
TRP
383
n
383
TRP
383
B
GLY
384
n
384
GLY
384
B
LYS
385
n
385
LYS
385
B
THR
386
n
386
THR
386
B
PRO
387
n
387
PRO
387
B
LYS
388
n
388
LYS
388
B
PHE
389
n
389
PHE
389
B
LYS
390
n
390
LYS
390
B
LEU
391
n
391
LEU
391
B
PRO
392
n
392
PRO
392
B
ILE
393
n
393
ILE
393
B
GLN
394
n
394
GLN
394
B
LYS
395
n
395
LYS
395
B
GLU
396
n
396
GLU
396
B
THR
397
n
397
THR
397
B
TRP
398
n
398
TRP
398
B
GLU
399
n
399
GLU
399
B
THR
400
n
400
THR
400
B
TRP
401
n
401
TRP
401
B
TRP
402
n
402
TRP
402
B
THR
403
n
403
THR
403
B
GLU
404
n
404
GLU
404
B
TYR
405
n
405
TYR
405
B
TRP
406
n
406
TRP
406
B
GLN
407
n
407
GLN
407
B
ALA
408
n
408
ALA
408
B
THR
409
n
409
THR
409
B
TRP
410
n
410
TRP
410
B
ILE
411
n
411
ILE
411
B
PRO
412
n
412
PRO
412
B
GLU
413
n
413
GLU
413
B
TRP
414
n
414
TRP
414
B
GLU
415
n
415
GLU
415
B
PHE
416
n
416
PHE
416
B
VAL
417
n
417
VAL
417
B
ASN
418
n
418
ASN
418
B
THR
419
n
419
THR
419
B
PRO
420
n
420
PRO
420
B
PRO
421
n
421
PRO
421
B
LEU
422
n
422
LEU
422
B
VAL
423
n
423
VAL
423
B
LYS
424
n
424
LYS
424
B
LEU
425
n
425
LEU
425
B
TRP
426
n
426
TRP
426
B
TYR
427
n
427
TYR
427
B
GLN
428
n
428
GLN
428
B
n
429
429
B
n
430
430
B
n
431
431
B
n
432
432
B
n
433
433
B
n
434
434
B
n
435
435
B
n
436
436
B
n
437
437
B
author_and_software_defined_assembly
PISA
4
tetrameric
14930
-91
49620
A
ASP
110
C
OD1
ASP
110
1_555
A
MG
600
F
MG
MG
1_555
A
VAL
111
C
O
VAL
111
1_555
79.2
A
ASP
110
C
OD1
ASP
110
1_555
A
MG
600
F
MG
MG
1_555
A
ASP
185
C
OD2
ASP
185
1_555
103.9
A
VAL
111
C
O
VAL
111
1_555
A
MG
600
F
MG
MG
1_555
A
ASP
185
C
OD2
ASP
185
1_555
85.2
A
ASP
110
C
OD1
ASP
110
1_555
A
MG
600
F
MG
MG
1_555
A
TNV
823
E
O1A
TNV
1_555
106.4
A
VAL
111
C
O
VAL
111
1_555
A
MG
600
F
MG
MG
1_555
A
TNV
823
E
O1A
TNV
1_555
161.6
A
ASP
185
C
OD2
ASP
185
1_555
A
MG
600
F
MG
MG
1_555
A
TNV
823
E
O1A
TNV
1_555
76.4
A
ASP
110
C
OD1
ASP
110
1_555
A
MG
600
F
MG
MG
1_555
A
TNV
823
E
O2B
TNV
1_555
169.1
A
VAL
111
C
O
VAL
111
1_555
A
MG
600
F
MG
MG
1_555
A
TNV
823
E
O2B
TNV
1_555
94.4
A
ASP
185
C
OD2
ASP
185
1_555
A
MG
600
F
MG
MG
1_555
A
TNV
823
E
O2B
TNV
1_555
84.2
A
TNV
823
E
O1A
TNV
1_555
A
MG
600
F
MG
MG
1_555
A
TNV
823
E
O2B
TNV
1_555
82.4
A
ASP
110
C
OD1
ASP
110
1_555
A
MG
600
F
MG
MG
1_555
A
TNV
823
E
O1G
TNV
1_555
88.0
A
VAL
111
C
O
VAL
111
1_555
A
MG
600
F
MG
MG
1_555
A
TNV
823
E
O1G
TNV
1_555
86.4
A
ASP
185
C
OD2
ASP
185
1_555
A
MG
600
F
MG
MG
1_555
A
TNV
823
E
O1G
TNV
1_555
164.0
A
TNV
823
E
O1A
TNV
1_555
A
MG
600
F
MG
MG
1_555
A
TNV
823
E
O1G
TNV
1_555
111.0
A
TNV
823
E
O2B
TNV
1_555
A
MG
600
F
MG
MG
1_555
A
TNV
823
E
O1G
TNV
1_555
82.8
A
ASP
443
C
OD2
ASP
443
1_555
A
MG
601
G
MG
MG
1_555
A
ASP
443
C
OD1
ASP
443
1_555
49.6
A
ASP
443
C
OD2
ASP
443
1_555
A
MG
601
G
MG
MG
1_555
A
ASP
498
C
OD2
ASP
498
1_555
139.4
A
ASP
443
C
OD1
ASP
443
1_555
A
MG
601
G
MG
MG
1_555
A
ASP
498
C
OD2
ASP
498
1_555
126.9
A
ASP
443
C
OD2
ASP
443
1_555
A
MG
601
G
MG
MG
1_555
A
ASP
498
C
OD1
ASP
498
1_555
136.8
A
ASP
443
C
OD1
ASP
443
1_555
A
MG
601
G
MG
MG
1_555
A
ASP
498
C
OD1
ASP
498
1_555
89.0
A
ASP
498
C
OD2
ASP
498
1_555
A
MG
601
G
MG
MG
1_555
A
ASP
498
C
OD1
ASP
498
1_555
52.3
A
ASP
443
C
OD2
ASP
443
1_555
A
MG
601
G
MG
MG
1_555
A
HOH
561
J
O
HOH
1_555
106.0
A
ASP
443
C
OD1
ASP
443
1_555
A
MG
601
G
MG
MG
1_555
A
HOH
561
J
O
HOH
1_555
132.6
A
ASP
498
C
OD2
ASP
498
1_555
A
MG
601
G
MG
MG
1_555
A
HOH
561
J
O
HOH
1_555
98.3
A
ASP
498
C
OD1
ASP
498
1_555
A
MG
601
G
MG
MG
1_555
A
HOH
561
J
O
HOH
1_555
112.7
P
MRG
817
B
MRG
16
DG
P
DDG
822
B
DDG
21
DG
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
SER
48
C
N
SER
48
A
O
GLN
145
C
O
GLN
145
A
O
ILE
142
C
O
ILE
142
A
N
ILE
132
C
N
ILE
132
A
N
PHE
61
C
N
PHE
61
A
O
LEU
74
C
O
LEU
74
A
N
LEU
109
C
N
LEU
109
A
O
LEU
187
C
O
LEU
187
A
O
ASP
186
C
O
ASP
186
A
N
TYR
183
C
N
TYR
183
A
N
PHE
227
C
N
PHE
227
A
O
LEU
234
C
O
LEU
234
A
N
GLU
233
C
N
GLU
233
A
O
THR
240
C
O
THR
240
A
N
TRP
252
C
N
TRP
252
A
O
ILE
293
C
O
ILE
293
A
O
LYS
350
C
O
LYS
350
A
N
ILE
341
C
N
ILE
341
A
O
THR
338
C
O
THR
338
A
N
GLN
330
C
N
GLN
330
A
N
ALA
327
C
N
ALA
327
A
O
LYS
388
C
O
LYS
388
A
N
LEU
391
C
N
LEU
391
A
O
GLU
415
C
O
GLU
415
A
N
THR
362
C
N
THR
362
A
O
LYS
512
C
O
LYS
512
A
O
VAL
467
C
O
VAL
467
A
N
ALA
455
C
N
ALA
455
A
O
LYS
454
C
O
LYS
454
A
N
ALA
445
C
N
ALA
445
A
N
PHE
440
C
N
PHE
440
A
O
ASN
494
C
O
ASN
494
A
N
THR
497
C
N
THR
497
A
O
ALA
534
C
O
ALA
534
B
N
PHE
61
D
N
PHE
61
B
O
LEU
74
D
O
LEU
74
B
N
TYR
183
D
N
TYR
183
B
O
ASP
186
D
O
ASP
186
B
O
LEU
187
D
O
LEU
187
B
N
LEU
109
D
N
LEU
109
B
N
VAL
106
D
N
VAL
106
B
O
LEU
234
D
O
LEU
234
B
N
ILE
132
D
N
ILE
132
B
O
ILE
142
D
O
ILE
142
B
N
ILE
326
D
N
ILE
326
B
O
TYR
342
D
O
TYR
342
B
N
TYR
339
D
N
TYR
339
B
O
GLY
352
D
O
GLY
352
B
N
LEU
391
D
N
LEU
391
B
O
GLU
415
D
O
GLU
415
1
T
P
DT
702
A
P
DT
2
1
Y
1
T
OP1
DT
702
A
OP1
DT
2
1
Y
1
T
OP2
DT
702
A
OP2
DT
2
1
Y
1
P
P
DC
803
B
P
DC
2
1
Y
1
P
OP1
DC
803
B
OP1
DC
2
1
Y
1
P
OP2
DC
803
B
OP2
DC
2
1
Y
1
T
DA
701
A
DA
1
1
Y
1
T
DT
726
A
DT
26
1
Y
1
T
DG
727
A
DG
27
1
Y
1
P
DA
802
B
DA
1
1
Y
1
A
GLY
555
C
GLY
555
1
Y
1
A
ILE
556
C
ILE
556
1
Y
1
A
ARG
557
C
ARG
557
1
Y
1
A
LYS
558
C
LYS
558
1
Y
1
B
PRO
1
D
PRO
1
1
Y
1
B
ILE
2
D
ILE
2
1
Y
1
B
ASP
218
D
ASP
218
1
Y
1
B
LYS
219
D
LYS
219
1
Y
1
B
LYS
220
D
LYS
220
1
Y
1
B
HIS
221
D
HIS
221
1
Y
1
B
GLN
222
D
GLN
222
1
Y
1
B
LYS
223
D
LYS
223
1
Y
1
B
GLU
224
D
GLU
224
1
Y
1
B
PRO
225
D
PRO
225
1
Y
1
B
PRO
226
D
PRO
226
1
Y
1
B
PHE
227
D
PHE
227
1
Y
1
B
LEU
228
D
LEU
228
1
Y
1
B
TRP
229
D
TRP
229
1
Y
1
B
MET
230
D
MET
230
1
Y
1
B
LEU
429
D
LEU
429
1
Y
1
B
GLY
430
D
GLY
430
1
Y
1
B
GLY
431
D
GLY
431
1
Y
1
B
HIS
432
D
HIS
432
1
Y
1
B
HIS
433
D
HIS
433
1
Y
1
B
HIS
434
D
HIS
434
1
Y
1
B
HIS
435
D
HIS
435
1
Y
1
B
HIS
436
D
HIS
436
1
Y
1
B
HIS
437
D
HIS
437
1
Y
1
T
DG
703
0.051
SIDE CHAIN
1
T
DG
704
0.057
SIDE CHAIN
1
T
DG
714
0.057
SIDE CHAIN
1
P
DG
815
0.071
SIDE CHAIN
1
-10.61
1.20
119.70
109.09
T
T
T
C3'
O3'
P
DC
DC
DA
717
717
718
Y
1
11.83
1.10
110.50
122.33
T
T
T
O3'
P
OP2
DC
DA
DA
717
718
718
Y
1
-19.76
2.20
105.20
85.44
T
T
T
O3'
P
OP1
DC
DA
DA
717
718
718
Y
1
-19.84
2.20
105.20
85.36
T
T
T
O3'
P
OP2
DA
DG
DG
718
719
719
Y
1
9.98
1.10
110.50
120.48
T
T
T
O3'
P
OP1
DA
DG
DG
718
719
719
Y
1
11.62
1.90
104.00
115.62
P
P
P
O3'
P
O5'
DC
DA
DA
803
804
804
Y
1
8.08
1.10
110.50
118.58
P
P
P
O3'
P
OP1
DA
DG
DG
804
805
805
Y
1
1.95
0.30
108.30
110.25
P
P
P
O4'
C1'
N9
DG
DG
DG
805
805
805
N
1
14.17
1.10
110.50
124.67
P
P
P
O3'
P
OP1
DG
DT
DT
805
806
806
Y
1
-25.22
0.90
105.70
80.48
P
P
P
O5'
P
OP1
DT
DT
DT
806
806
806
N
1
9.43
1.20
110.70
120.13
P
P
P
O5'
P
OP2
DT
DT
DT
806
806
806
N
1
-7.68
1.20
119.70
112.02
P
P
P
C3'
O3'
P
DC
DC
DC
808
808
809
Y
1
-15.26
1.20
119.70
104.44
P
P
P
C3'
O3'
P
MRG
MRG
DC
817
817
818
Y
1
16.96
1.90
104.00
120.96
P
P
P
O3'
P
O5'
MRG
DC
DC
817
818
818
Y
1
-19.15
2.70
111.00
91.85
A
A
A
N
CA
C
LYS
LYS
LYS
219
219
219
N
1
-20.39
2.70
111.00
90.61
A
A
A
N
CA
C
LYS
LYS
LYS
223
223
223
N
1
9.37
1.50
119.30
128.67
A
A
A
C
N
CA
LEU
PRO
PRO
391
392
392
Y
1
9.12
1.50
119.30
128.42
A
A
A
C
N
CA
ILE
PRO
PRO
411
412
412
Y
1
-13.09
1.90
111.40
98.31
B
B
B
CB
CA
C
VAL
VAL
VAL
60
60
60
N
1
-19.99
2.70
111.00
91.01
B
B
B
N
CA
C
VAL
VAL
VAL
241
241
241
N
1
-16.06
2.00
110.40
94.34
B
B
B
CB
CA
C
TYR
TYR
TYR
339
339
339
N
1
9.06
1.50
119.30
128.36
B
B
B
C
N
CA
LEU
PRO
PRO
391
392
392
Y
1
10.76
1.50
110.10
120.86
B
B
B
CB
CA
C
ALA
ALA
ALA
408
408
408
N
1
P
P
O3'
P
DC
DA
803
804
-0.137
0.012
1.607
1.470
Y
1
A
PRO
14
-30.07
129.00
1
A
LYS
20
-144.68
36.42
1
A
PRO
25
-38.12
145.58
1
A
THR
27
-57.35
170.59
1
A
ASN
57
-172.87
144.81
1
A
PHE
77
-73.91
26.01
1
A
PHE
116
-67.32
15.08
1
A
ASN
136
-64.72
7.72
1
A
GLU
138
-123.30
-76.31
1
A
LEU
149
-51.29
107.27
1
A
MET
184
68.00
-111.85
1
A
LYS
219
-158.88
13.53
1
A
GLN
222
-113.97
-72.00
1
A
MET
230
57.11
15.11
1
A
ILE
244
-116.47
69.66
1
A
SER
268
-63.61
1.08
1
A
ILE
270
-133.56
-40.76
1
A
LYS
281
-36.97
-33.83
1
A
LEU
282
-64.38
6.86
1
A
LEU
289
-78.77
33.99
1
A
THR
290
-143.04
-14.17
1
A
ARG
307
-38.90
-26.22
1
A
GLN
343
-133.47
-35.44
1
A
PRO
345
-39.67
127.63
1
A
PHE
346
79.76
-17.63
1
A
LYS
347
-104.60
76.29
1
A
ILE
393
-162.11
119.27
1
A
LYS
395
-57.99
-5.05
1
A
THR
397
-35.63
-36.79
1
A
PRO
412
-70.43
-168.87
1
A
PRO
420
-44.18
161.30
1
A
TYR
427
173.95
162.23
1
A
LYS
431
-106.70
48.78
1
A
GLU
432
-178.97
121.41
1
A
PRO
433
-37.13
145.94
1
A
VAL
435
-46.44
155.79
1
A
THR
450
-68.96
-177.30
1
A
LYS
451
-76.51
-76.37
1
A
LEU
452
-75.55
-165.41
1
A
ASN
471
59.09
15.21
1
A
LYS
476
-50.18
-5.04
1
A
ALA
485
-48.03
-0.26
1
A
ASP
488
-77.60
21.52
1
A
LEU
491
-37.65
-34.49
1
A
LYS
530
-171.86
127.39
1
B
PRO
4
-59.24
86.73
1
B
ILE
5
-108.46
-168.13
1
B
GLU
6
-151.88
75.21
1
B
LYS
13
-43.83
167.35
1
B
PRO
25
-36.62
138.47
1
B
LEU
26
-123.35
-169.22
1
B
LYS
43
-65.44
2.54
1
B
ASP
67
38.25
43.60
1
B
GLN
85
-51.00
172.57
1
B
ASP
86
-48.84
0.26
1
B
PHE
87
-33.08
-39.93
1
B
GLU
89
-108.53
-77.94
1
B
LEU
92
-142.49
59.88
1
B
HIS
96
-50.27
105.79
1
B
ALA
98
-39.02
-10.49
1
B
LYS
103
-39.66
127.24
1
B
ASP
113
-56.70
2.69
1
B
PHE
116
-65.75
10.65
1
B
PRO
119
-25.61
121.98
1
B
LYS
126
-52.54
-4.18
1
B
THR
128
-76.52
22.39
1
B
VAL
148
-101.48
-167.18
1
B
GLU
169
-39.45
-38.67
1
B
ASN
175
-159.21
51.44
1
B
MET
184
51.89
-110.52
1
B
SER
191
-133.70
-154.91
1
B
ASP
192
-143.05
-13.62
1
B
ARG
211
-90.65
34.25
1
B
LEU
214
-38.71
154.58
1
B
HIS
235
-164.23
55.59
1
B
PRO
236
-38.17
-32.65
1
B
LYS
238
-77.76
49.75
1
B
TRP
239
-176.20
116.83
1
B
SER
251
-171.81
120.96
1
B
GLN
258
-48.59
-16.91
1
B
LYS
259
-81.93
-72.10
1
B
ALA
267
-67.51
8.24
1
B
LEU
282
-45.02
-7.90
1
B
PRO
294
-43.97
171.22
1
B
LYS
311
-160.44
-14.82
1
B
VAL
314
-46.08
163.15
1
B
TYR
319
-65.68
91.84
1
B
GLN
332
-96.55
-80.43
1
B
PHE
346
78.91
-18.43
1
B
ARG
358
-72.42
41.94
1
B
ALA
371
-91.39
38.68
1
B
VAL
372
-144.93
-25.33
1
B
TRP
383
-143.83
-6.23
1
B
PRO
387
-69.31
-158.55
1
B
THR
403
-49.31
-16.72
1
B
GLN
407
-154.85
4.38
1
B
THR
409
-92.49
32.88
1
B
PRO
421
-93.11
-142.56
1
B
LEU
422
87.60
-14.67
PROTEIN_REP.PARAM
PROTEIN.TOP
DNA-RNA.PARAM
WATER_REP.PARAM
TFV_MRG_SUC.PAR
TFV_MRG_SUC.TOP
ION.PARAM
ION.TOP
7.21000
0.00000
0.00000
7.21000
0.00000
-14.41000
BULK SOLVENT MODEL USED
0.285
0.007
0.252
0.252
3.00
49.17
1530
51633
49494
3.100
95.8
RANDOM
4226829.050
0.0000
1
RESTRAINED
THROUGHOUT
0.000
MOLECULAR REPLACEMENT
PDB ENTRY 1T05
ENGH & HUBER
FLAT MODEL
41.38
0.30
0.53
0.47
10.00
0.68
0.75
3.00
49.17
1
8854
39
901
7913
0.009
1.70
22.50
1.19
0.3640
0.023
0.3950
3.19
247
7115
6
3.40
86.20
53.00
3.0
50
3JSM
49501
-1.0
0.156
1
5.6
95.8
0.563
3.0
3.11
1
82.3
data collection
ADSC
Quantum
refinement
CNS
data reduction
HKL-2000
data scaling
SCALEPACK
phasing
CNS
K65R mutant HIV-1 reverse transcriptase cross-linked to DS-DNA and complexed with tenofovir-diphosphate as the incoming nucleotide substrate
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
6
N
N
6
N
N
7
N
N
7
N
N
8
N
N
A
THR
27
C
THR
27
HELX_P
A
GLY
45
C
GLY
45
1
1
19
A
PHE
77
C
PHE
77
HELX_P
A
THR
84
C
THR
84
1
2
8
A
HIS
96
C
HIS
96
HELX_P
A
LEU
100
C
LEU
100
5
3
5
A
ALA
114
C
ALA
114
HELX_P
A
VAL
118
C
VAL
118
5
4
5
A
PHE
124
C
PHE
124
HELX_P
A
ALA
129
C
ALA
129
5
5
6
A
GLY
155
C
GLY
155
HELX_P
A
ASN
175
C
ASN
175
1
6
21
A
GLU
194
C
GLU
194
HELX_P
A
TRP
212
C
TRP
212
1
7
19
A
VAL
254
C
VAL
254
HELX_P
A
SER
268
C
SER
268
1
8
15
A
VAL
276
C
VAL
276
HELX_P
A
LEU
282
C
LEU
282
1
9
7
A
THR
296
C
THR
296
HELX_P
A
LEU
310
C
LEU
310
1
10
15
A
ASN
363
C
ASN
363
HELX_P
A
GLY
384
C
GLY
384
1
11
22
A
GLN
394
C
GLN
394
HELX_P
A
TYR
405
C
TYR
405
1
12
12
A
THR
473
C
THR
473
HELX_P
A
TYR
483
C
TYR
483
1
13
11
A
TYR
483
C
TYR
483
HELX_P
A
ASP
488
C
ASP
488
1
14
6
A
GLN
500
C
GLN
500
HELX_P
A
ALA
508
C
ALA
508
1
15
9
A
SER
515
C
SER
515
HELX_P
A
LYS
528
C
LYS
528
1
16
14
A
GLY
544
C
GLY
544
HELX_P
A
ALA
554
C
ALA
554
1
17
11
B
THR
27
D
THR
27
HELX_P
B
LYS
43
D
LYS
43
1
18
17
B
PHE
77
D
PHE
77
HELX_P
B
LYS
82
D
LYS
82
1
19
6
B
GLN
85
D
GLN
85
HELX_P
B
GLU
89
D
GLU
89
5
20
5
B
ALA
98
D
ALA
98
HELX_P
B
LYS
103
D
LYS
103
1
21
6
B
GLY
112
D
GLY
112
HELX_P
B
VAL
118
D
VAL
118
5
22
7
B
ASP
121
D
ASP
121
HELX_P
B
LYS
126
D
LYS
126
1
23
6
B
SER
134
D
SER
134
HELX_P
B
GLU
138
D
GLU
138
5
24
5
B
LYS
154
D
LYS
154
HELX_P
B
GLN
174
D
GLN
174
1
25
21
B
GLU
194
D
GLU
194
HELX_P
B
ARG
211
D
ARG
211
1
26
18
B
THR
253
D
THR
253
HELX_P
B
ALA
267
D
ALA
267
1
27
15
B
VAL
276
D
VAL
276
HELX_P
B
LYS
281
D
LYS
281
1
28
6
B
GLU
298
D
GLU
298
HELX_P
B
ASN
306
D
ASN
306
1
29
9
B
ASN
363
D
ASN
363
HELX_P
B
GLY
384
D
GLY
384
1
30
22
B
GLN
394
D
GLN
394
HELX_P
B
TRP
402
D
TRP
402
1
31
9
B
THR
403
D
THR
403
HELX_P
B
TYR
405
D
TYR
405
5
32
3
covale
1.606
both
P
DG
816
B
O3'
DG
15
1_555
P
MRG
817
B
P
MRG
16
1_555
covale
1.596
both
P
MRG
817
B
O3'
MRG
16
1_555
P
DC
818
B
P
DC
17
1_555
covale
2.010
none
P
MRG
817
B
S24
MRG
16
1_555
A
CYS
258
C
SG
CYS
258
1_555
covale
1.597
both
P
DC
821
B
O3'
DC
20
1_555
P
DDG
822
B
P
DDG
21
1_555
metalc
2.340
A
ASP
110
C
OD1
ASP
110
1_555
A
MG
600
F
MG
MG
1_555
metalc
2.186
A
VAL
111
C
O
VAL
111
1_555
A
MG
600
F
MG
MG
1_555
metalc
2.283
A
ASP
185
C
OD2
ASP
185
1_555
A
MG
600
F
MG
MG
1_555
metalc
2.546
A
ASP
443
C
OD2
ASP
443
1_555
A
MG
601
G
MG
MG
1_555
metalc
2.623
A
ASP
443
C
OD1
ASP
443
1_555
A
MG
601
G
MG
MG
1_555
metalc
2.394
A
ASP
498
C
OD2
ASP
498
1_555
A
MG
601
G
MG
MG
1_555
metalc
2.582
A
ASP
498
C
OD1
ASP
498
1_555
A
MG
601
G
MG
MG
1_555
metalc
2.341
A
HOH
561
J
O
HOH
1_555
A
MG
601
G
MG
MG
1_555
metalc
2.422
A
MG
600
F
MG
MG
1_555
A
TNV
823
E
O1A
TNV
1_555
metalc
2.290
A
MG
600
F
MG
MG
1_555
A
TNV
823
E
O2B
TNV
1_555
metalc
2.304
A
MG
600
F
MG
MG
1_555
A
TNV
823
E
O1G
TNV
1_555
hydrog
WATSON-CRICK
T
DC
706
A
N3
DC
6
1_555
P
DDG
822
B
N1
DDG
21
1_555
hydrog
WATSON-CRICK
T
DC
706
A
N4
DC
6
1_555
P
DDG
822
B
O6
DDG
21
1_555
hydrog
WATSON-CRICK
T
DC
706
A
O2
DC
6
1_555
P
DDG
822
B
N2
DDG
21
1_555
hydrog
WATSON-CRICK
T
DG
707
A
N1
DG
7
1_555
P
DC
821
B
N3
DC
20
1_555
hydrog
WATSON-CRICK
T
DG
707
A
N2
DG
7
1_555
P
DC
821
B
O2
DC
20
1_555
hydrog
WATSON-CRICK
T
DG
707
A
O6
DG
7
1_555
P
DC
821
B
N4
DC
20
1_555
hydrog
WATSON-CRICK
T
DG
708
A
N1
DG
8
1_555
P
DC
820
B
N3
DC
19
1_555
hydrog
WATSON-CRICK
T
DG
708
A
N2
DG
8
1_555
P
DC
820
B
O2
DC
19
1_555
hydrog
WATSON-CRICK
T
DG
708
A
O6
DG
8
1_555
P
DC
820
B
N4
DC
19
1_555
hydrog
WATSON-CRICK
T
DC
709
A
N3
DC
9
1_555
P
DG
819
B
N1
DG
18
1_555
hydrog
WATSON-CRICK
T
DC
709
A
N4
DC
9
1_555
P
DG
819
B
O6
DG
18
1_555
hydrog
WATSON-CRICK
T
DC
709
A
O2
DC
9
1_555
P
DG
819
B
N2
DG
18
1_555
hydrog
WATSON-CRICK
T
DG
710
A
N1
DG
10
1_555
P
DC
818
B
N3
DC
17
1_555
hydrog
WATSON-CRICK
T
DG
710
A
N2
DG
10
1_555
P
DC
818
B
O2
DC
17
1_555
hydrog
WATSON-CRICK
T
DG
710
A
O6
DG
10
1_555
P
DC
818
B
N4
DC
17
1_555
hydrog
WATSON-CRICK
T
DC
711
A
N3
DC
11
1_555
P
MRG
817
B
N1
MRG
16
1_555
hydrog
WATSON-CRICK
T
DC
711
A
N4
DC
11
1_555
P
MRG
817
B
O6
MRG
16
1_555
hydrog
WATSON-CRICK
T
DC
711
A
O2
DC
11
1_555
P
MRG
817
B
N2
MRG
16
1_555
hydrog
WATSON-CRICK
T
DC
712
A
N3
DC
12
1_555
P
DG
816
B
N1
DG
15
1_555
hydrog
WATSON-CRICK
T
DC
712
A
N4
DC
12
1_555
P
DG
816
B
O6
DG
15
1_555
hydrog
WATSON-CRICK
T
DC
712
A
O2
DC
12
1_555
P
DG
816
B
N2
DG
15
1_555
hydrog
DC-DG PAIR
T
DC
713
A
O2
DC
13
1_555
P
DG
815
B
N2
DG
14
1_555
hydrog
WATSON-CRICK
T
DG
714
A
N1
DG
14
1_555
P
DC
814
B
N3
DC
13
1_555
hydrog
WATSON-CRICK
T
DG
714
A
N2
DG
14
1_555
P
DC
814
B
O2
DC
13
1_555
hydrog
WATSON-CRICK
T
DG
714
A
O6
DG
14
1_555
P
DC
814
B
N4
DC
13
1_555
hydrog
DA-DT PAIR
T
DA
715
A
N6
DA
15
1_555
P
DT
812
B
O4
DT
11
1_555
hydrog
WATSON-CRICK
T
DA
715
A
N1
DA
15
1_555
P
DT
813
B
N3
DT
12
1_555
hydrog
WATSON-CRICK
T
DA
715
A
N6
DA
15
1_555
P
DT
813
B
O4
DT
12
1_555
hydrog
WATSON-CRICK
T
DA
716
A
N1
DA
16
1_555
P
DT
812
B
N3
DT
11
1_555
hydrog
WATSON-CRICK
T
DA
716
A
N6
DA
16
1_555
P
DT
812
B
O4
DT
11
1_555
hydrog
WATSON-CRICK
T
DC
717
A
N3
DC
17
1_555
P
DG
811
B
N1
DG
10
1_555
hydrog
WATSON-CRICK
T
DC
717
A
N4
DC
17
1_555
P
DG
811
B
O6
DG
10
1_555
hydrog
WATSON-CRICK
T
DC
717
A
O2
DC
17
1_555
P
DG
811
B
N2
DG
10
1_555
hydrog
WATSON-CRICK
T
DA
718
A
N1
DA
18
1_555
P
DT
810
B
N3
DT
9
1_555
hydrog
WATSON-CRICK
T
DA
718
A
N6
DA
18
1_555
P
DT
810
B
O4
DT
9
1_555
hydrog
DG-DC PAIR
T
DG
719
A
O6
DG
19
1_555
P
DC
808
B
N4
DC
7
1_555
hydrog
WATSON-CRICK
T
DG
719
A
N1
DG
19
1_555
P
DC
809
B
N3
DC
8
1_555
hydrog
WATSON-CRICK
T
DG
719
A
N2
DG
19
1_555
P
DC
809
B
O2
DC
8
1_555
hydrog
WATSON-CRICK
T
DG
719
A
O6
DG
19
1_555
P
DC
809
B
N4
DC
8
1_555
hydrog
DG-DC PAIR
T
DG
720
A
O6
DG
20
1_555
P
DC
807
B
N4
DC
6
1_555
hydrog
WATSON-CRICK
T
DG
720
A
N1
DG
20
1_555
P
DC
808
B
N3
DC
7
1_555
hydrog
WATSON-CRICK
T
DG
720
A
N2
DG
20
1_555
P
DC
808
B
O2
DC
7
1_555
hydrog
WATSON-CRICK
T
DG
720
A
O6
DG
20
1_555
P
DC
808
B
N4
DC
7
1_555
hydrog
WATSON-CRICK
T
DG
721
A
N1
DG
21
1_555
P
DC
807
B
N3
DC
6
1_555
hydrog
WATSON-CRICK
T
DG
721
A
N2
DG
21
1_555
P
DC
807
B
O2
DC
6
1_555
hydrog
WATSON-CRICK
T
DG
721
A
O6
DG
21
1_555
P
DC
807
B
N4
DC
6
1_555
hydrog
DA-DT PAIR
T
DA
722
A
N1
DA
22
1_555
P
DT
806
B
N3
DT
5
1_555
hydrog
DC-DG PAIR
T
DC
723
A
O2
DC
23
1_555
P
DG
805
B
N2
DG
4
1_555
hydrog
DG-DC PAIR
T
DG
725
A
N2
DG
25
1_555
P
DC
803
B
N3
DC
2
1_555
TRANSFERASE/DNA COMPLEX
HIV-1 REVERSE TRANSCRIPTASE, TENOFOVIR, RT-DNA COMPLEX, TRANSFERASE-DNA COMPLEX, DRUG RESISTANCE MUTATION, AIDS, DNA RECOMBINATION, DNA-DIRECTED DNA POLYMERASE, RNASE H, HYDROLASE, LIPOPROTEIN, MAGNESIUM, MEMBRANE, METAL-BINDING, MULTIFUNCTIONAL ENZYME, NUCLEOTIDYLTRANSFERASE, RNA-DIRECTED DNA POLYMERASE TRANSFERASE, TRANSFERASE-DNA COMPLEX complex
A
PRO
225
C
PRO
225
1
A
PRO
226
C
PRO
226
-0.25
A
PRO
420
C
PRO
420
1
A
PRO
421
C
PRO
421
-1.02
POL_HV1B1
UNP
3
600
P03366
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFREL
NKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIF
QSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWT
VQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILKEPVHGVYYD
PSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWET
WWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQ
AIYLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRK
POL_HV1B1
UNP
4
600
P03366
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFREL
NKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIF
QSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWT
VQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILKEPVHGVYYD
PSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWET
WWTEYWQATWIPEWEFVNTPPLVKLWYQL
3JSM
PDB
1
3JSM
ATGGTCGGCGCCCGAACAGGGACTGTG
3JSM
PDB
2
3JSM
ACAGTCCCTGTTCGGGCGCCG
600
1157
3JSM
1
558
P03366
A
1
1
558
600
1028
3JSM
1
429
P03366
B
2
1
429
701
727
3JSM
701
727
3JSM
T
3
1
27
802
822
3JSM
802
822
3JSM
P
4
1
21
1
LYS
engineered mutation
ARG
65
3JSM
A
P03366
UNP
664
65
1
GLN
engineered mutation
CYS
258
3JSM
A
P03366
UNP
857
258
1
CYS
engineered mutation
SER
280
3JSM
A
P03366
UNP
879
280
2
CYS
engineered mutation
SER
280
3JSM
B
P03366
UNP
879
280
2
expression tag
GLY
430
3JSM
B
P03366
UNP
430
2
expression tag
GLY
431
3JSM
B
P03366
UNP
431
2
expression tag
HIS
432
3JSM
B
P03366
UNP
432
2
expression tag
HIS
433
3JSM
B
P03366
UNP
433
2
expression tag
HIS
434
3JSM
B
P03366
UNP
434
2
expression tag
HIS
435
3JSM
B
P03366
UNP
435
2
expression tag
HIS
436
3JSM
B
P03366
UNP
436
2
expression tag
HIS
437
3JSM
B
P03366
UNP
437
3
2
3
3
2
5
2
5
2
4
2
3
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
A
ILE
47
C
ILE
47
A
LYS
49
C
LYS
49
A
ILE
142
C
ILE
142
A
TYR
146
C
TYR
146
A
PHE
130
C
PHE
130
A
ILE
132
C
ILE
132
A
VAL
60
C
VAL
60
A
LYS
64
C
LYS
64
A
TRP
71
C
TRP
71
A
VAL
75
C
VAL
75
A
SER
105
C
SER
105
A
ASP
110
C
ASP
110
A
ASP
186
C
ASP
186
A
SER
191
C
SER
191
A
VAL
179
C
VAL
179
A
TYR
183
C
TYR
183
A
PHE
227
C
PHE
227
A
TRP
229
C
TRP
229
A
TYR
232
C
TYR
232
A
LEU
234
C
LEU
234
A
TRP
239
C
TRP
239
A
VAL
241
C
VAL
241
A
TRP
252
C
TRP
252
A
THR
253
C
THR
253
A
VAL
292
C
VAL
292
A
ILE
293
C
ILE
293
A
LYS
347
C
LYS
347
A
TYR
354
C
TYR
354
A
GLN
336
C
GLN
336
A
GLU
344
C
GLU
344
A
ILE
326
C
ILE
326
A
GLY
333
C
GLY
333
A
LYS
388
C
LYS
388
A
LEU
391
C
LEU
391
A
TRP
414
C
TRP
414
A
PHE
416
C
PHE
416
A
HIS
361
C
HIS
361
A
THR
362
C
THR
362
A
LYS
512
C
LYS
512
A
SER
513
C
SER
513
A
GLN
464
C
GLN
464
A
VAL
467
C
VAL
467
A
GLY
453
C
GLY
453
A
VAL
458
C
VAL
458
A
THR
439
C
THR
439
A
ALA
446
C
ALA
446
A
GLU
492
C
GLU
492
A
THR
497
C
THR
497
A
LYS
530
C
LYS
530
A
TRP
535
C
TRP
535
B
VAL
60
D
VAL
60
B
ILE
63
D
ILE
63
B
ARG
72
D
ARG
72
B
VAL
75
D
VAL
75
B
VAL
179
D
VAL
179
B
TYR
183
D
TYR
183
B
ASP
186
D
ASP
186
B
GLY
190
D
GLY
190
B
VAL
106
D
VAL
106
B
ASP
110
D
ASP
110
B
GLU
233
D
GLU
233
B
LEU
234
D
LEU
234
B
PHE
130
D
PHE
130
B
ILE
132
D
ILE
132
B
ILE
142
D
ILE
142
B
TYR
144
D
TYR
144
B
ILE
326
D
ILE
326
B
LYS
331
D
LYS
331
B
TRP
337
D
TRP
337
B
TYR
342
D
TYR
342
B
ASN
348
D
ASN
348
B
TYR
354
D
TYR
354
B
LYS
388
D
LYS
388
B
LEU
391
D
LEU
391
B
GLU
413
D
GLU
413
B
PHE
416
D
PHE
416
BINDING SITE FOR RESIDUE TNV A 823
A
TNV
823
Software
16
BINDING SITE FOR RESIDUE MG A 600
A
MG
600
Software
4
BINDING SITE FOR RESIDUE MG A 601
A
MG
601
Software
4
BINDING SITE FOR RESIDUE SO4 A 559
A
SO4
559
Software
3
BINDING SITE FOR RESIDUE SO4 A 560
A
SO4
560
Software
6
A
ARG
65
C
ARG
65
16
1_555
A
LYS
70
C
LYS
70
16
1_555
A
ARG
72
C
ARG
72
16
1_555
A
ASP
110
C
ASP
110
16
1_555
A
VAL
111
C
VAL
111
16
1_555
A
GLY
112
C
GLY
112
16
1_555
A
ASP
113
C
ASP
113
16
1_555
A
ALA
114
C
ALA
114
16
1_555
A
TYR
115
C
TYR
115
16
1_555
A
GLN
151
C
GLN
151
16
1_555
A
ASP
185
C
ASP
185
16
1_555
A
LYS
219
C
LYS
219
16
1_555
A
MG
600
F
MG
16
1_555
P
DDG
822
B
DDG
21
16
1_555
T
DT
705
A
DT
5
16
1_555
T
DC
706
A
DC
6
16
1_555
A
ASP
110
C
ASP
110
4
1_555
A
VAL
111
C
VAL
111
4
1_555
A
ASP
185
C
ASP
185
4
1_555
A
TNV
823
E
TNV
4
1_555
A
ASP
443
C
ASP
443
4
1_555
A
GLU
478
C
GLU
478
4
1_555
A
ASP
498
C
ASP
498
4
1_555
A
HOH
561
J
HOH
4
1_555
A
ARG
65
C
ARG
65
3
1_555
A
LYS
66
C
LYS
66
3
1_555
A
ARG
72
C
ARG
72
3
1_555
A
LYS
102
C
LYS
102
6
1_555
A
LYS
103
C
LYS
103
6
1_555
A
VAL
106
C
VAL
106
6
1_555
A
TYR
188
C
TYR
188
6
1_555
A
HIS
235
C
HIS
235
6
1_555
A
TYR
318
C
TYR
318
6
1_555
151
P 31 1 2