0.018057 0.000000 0.003129 0.000000 0.021801 0.000000 0.000000 0.000000 0.012185 0.00000 0.00000 0.00000 Yoshikawa, A. Sato, Y. Mimura, H. Yamashita, M. Yamagata, A. Fukai, S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 99.83 90.00 55.380 45.870 83.290 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking NE Febs Lett. FEBLAL 0165 0014-5793 583 3317 3322 10.1016/j.febslet.2009.09.028 19766637 Crystal structure of the NEMO ubiquitin-binding domain in complex with Lys 63-linked di-ubiquitin 2009 10.2210/pdb3jsv/pdb pdb_00003jsv 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 90 1 CCD ADSC QUANTUM 315 SINGLE WAVELENGTH M x-ray 1 1.000 1.0 BL41XU SPring-8 1.000 SYNCHROTRON SPRING-8 BEAMLINE BL41XU 8604.845 Ubiquitin K63R 1 man polymer 8691.918 Ubiquitin X77D 1 man polymer 11105.640 NF-kappa-B essential modulator residues 250-343 2 man polymer 18.015 water 26 nat water NEMO, NF-kappa-B essential modifier, Inhibitor of nuclear factor kappa-B kinase subunit gamma, IkB kinase subunit gamma, I-kappa-B kinase gamma, IKK-gamma, IKKG, IkB kinase-associated protein 1, IKKAP1, mFIP-3 no no MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQRESTLHLVLRLRGG MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQRESTLHLVLRLRGG A polypeptide(L) no no MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGD MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGD B polypeptide(L) no no GMQLEDLRQQLQQAEEALVAKQELIDKLKEEAEQHKIVMETVPVLKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQL QREFNKLKVGCHES GMQLEDLRQQLQQAEEALVAKQELIDKLKEEAEQHKIVMETVPVLKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQL QREFNKLKVGCHES C,D polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample 9606 Homo sapiens 562 Escherichia coli Rosetta(DE3) plasmid pET human sample 9606 Homo sapiens 562 Escherichia coli Rosetta(DE3) plasmid pET mouse sample Ikbkg, Nemo, NEMO(249-343) 10090 Mus musculus 562 Escherichia coli Rosetta(DE3) plasmid pCold 1 2.64 53.38 VAPOR DIFFUSION, SITTING DROP 7 pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 293K 293 database_2 struct_conn struct_ref_seq_dif repository Initial release Version format compliance Database references Derived calculations 1 0 2009-10-27 1 1 2011-07-13 1 2 2021-11-10 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag _struct_ref_seq_dif.details RCSB Y PDBJ 2009-09-11 REL REL HOH water TIP 1 4 HOH HOH 77 A TIP 2 4 HOH HOH 78 A TIP 3 4 HOH HOH 79 A TIP 6 4 HOH HOH 80 A TIP 8 4 HOH HOH 81 A TIP 11 4 HOH HOH 82 A TIP 12 4 HOH HOH 83 A TIP 13 4 HOH HOH 84 A TIP 14 4 HOH HOH 85 A TIP 15 4 HOH HOH 86 A TIP 16 4 HOH HOH 87 A TIP 17 4 HOH HOH 88 A TIP 18 4 HOH HOH 89 A TIP 20 4 HOH HOH 90 A TIP 22 4 HOH HOH 91 A TIP 23 4 HOH HOH 92 A TIP 26 4 HOH HOH 93 A TIP 5 4 HOH HOH 78 B TIP 7 4 HOH HOH 79 B TIP 24 4 HOH HOH 80 B TIP 4 4 HOH HOH 4 C TIP 9 4 HOH HOH 9 C TIP 21 4 HOH HOH 21 C TIP 10 4 HOH HOH 10 D TIP 19 4 HOH HOH 19 D TIP 25 4 HOH HOH 25 D MET 1 n 1 MET 1 A GLN 2 n 2 GLN 2 A ILE 3 n 3 ILE 3 A PHE 4 n 4 PHE 4 A VAL 5 n 5 VAL 5 A LYS 6 n 6 LYS 6 A THR 7 n 7 THR 7 A LEU 8 n 8 LEU 8 A THR 9 n 9 THR 9 A GLY 10 n 10 GLY 10 A LYS 11 n 11 LYS 11 A THR 12 n 12 THR 12 A ILE 13 n 13 ILE 13 A THR 14 n 14 THR 14 A LEU 15 n 15 LEU 15 A GLU 16 n 16 GLU 16 A VAL 17 n 17 VAL 17 A GLU 18 n 18 GLU 18 A PRO 19 n 19 PRO 19 A SER 20 n 20 SER 20 A ASP 21 n 21 ASP 21 A THR 22 n 22 THR 22 A ILE 23 n 23 ILE 23 A GLU 24 n 24 GLU 24 A ASN 25 n 25 ASN 25 A VAL 26 n 26 VAL 26 A LYS 27 n 27 LYS 27 A ALA 28 n 28 ALA 28 A LYS 29 n 29 LYS 29 A ILE 30 n 30 ILE 30 A GLN 31 n 31 GLN 31 A ASP 32 n 32 ASP 32 A LYS 33 n 33 LYS 33 A GLU 34 n 34 GLU 34 A GLY 35 n 35 GLY 35 A ILE 36 n 36 ILE 36 A PRO 37 n 37 PRO 37 A PRO 38 n 38 PRO 38 A ASP 39 n 39 ASP 39 A GLN 40 n 40 GLN 40 A GLN 41 n 41 GLN 41 A ARG 42 n 42 ARG 42 A LEU 43 n 43 LEU 43 A ILE 44 n 44 ILE 44 A PHE 45 n 45 PHE 45 A ALA 46 n 46 ALA 46 A GLY 47 n 47 GLY 47 A LYS 48 n 48 LYS 48 A GLN 49 n 49 GLN 49 A LEU 50 n 50 LEU 50 A GLU 51 n 51 GLU 51 A ASP 52 n 52 ASP 52 A GLY 53 n 53 GLY 53 A ARG 54 n 54 ARG 54 A THR 55 n 55 THR 55 A LEU 56 n 56 LEU 56 A SER 57 n 57 SER 57 A ASP 58 n 58 ASP 58 A TYR 59 n 59 TYR 59 A ASN 60 n 60 ASN 60 A ILE 61 n 61 ILE 61 A GLN 62 n 62 GLN 62 A ARG 63 n 63 ARG 63 A GLU 64 n 64 GLU 64 A SER 65 n 65 SER 65 A THR 66 n 66 THR 66 A LEU 67 n 67 LEU 67 A HIS 68 n 68 HIS 68 A LEU 69 n 69 LEU 69 A VAL 70 n 70 VAL 70 A LEU 71 n 71 LEU 71 A ARG 72 n 72 ARG 72 A LEU 73 n 73 LEU 73 A ARG 74 n 74 ARG 74 A GLY 75 n 75 GLY 75 A GLY 76 n 76 GLY 76 A MET 1 n 1 MET 1 B GLN 2 n 2 GLN 2 B ILE 3 n 3 ILE 3 B PHE 4 n 4 PHE 4 B VAL 5 n 5 VAL 5 B LYS 6 n 6 LYS 6 B THR 7 n 7 THR 7 B LEU 8 n 8 LEU 8 B THR 9 n 9 THR 9 B GLY 10 n 10 GLY 10 B LYS 11 n 11 LYS 11 B THR 12 n 12 THR 12 B ILE 13 n 13 ILE 13 B THR 14 n 14 THR 14 B LEU 15 n 15 LEU 15 B GLU 16 n 16 GLU 16 B VAL 17 n 17 VAL 17 B GLU 18 n 18 GLU 18 B PRO 19 n 19 PRO 19 B SER 20 n 20 SER 20 B ASP 21 n 21 ASP 21 B THR 22 n 22 THR 22 B ILE 23 n 23 ILE 23 B GLU 24 n 24 GLU 24 B ASN 25 n 25 ASN 25 B VAL 26 n 26 VAL 26 B LYS 27 n 27 LYS 27 B ALA 28 n 28 ALA 28 B LYS 29 n 29 LYS 29 B ILE 30 n 30 ILE 30 B GLN 31 n 31 GLN 31 B ASP 32 n 32 ASP 32 B LYS 33 n 33 LYS 33 B GLU 34 n 34 GLU 34 B GLY 35 n 35 GLY 35 B ILE 36 n 36 ILE 36 B PRO 37 n 37 PRO 37 B PRO 38 n 38 PRO 38 B ASP 39 n 39 ASP 39 B GLN 40 n 40 GLN 40 B GLN 41 n 41 GLN 41 B ARG 42 n 42 ARG 42 B LEU 43 n 43 LEU 43 B ILE 44 n 44 ILE 44 B PHE 45 n 45 PHE 45 B ALA 46 n 46 ALA 46 B GLY 47 n 47 GLY 47 B LYS 48 n 48 LYS 48 B GLN 49 n 49 GLN 49 B LEU 50 n 50 LEU 50 B GLU 51 n 51 GLU 51 B ASP 52 n 52 ASP 52 B GLY 53 n 53 GLY 53 B ARG 54 n 54 ARG 54 B THR 55 n 55 THR 55 B LEU 56 n 56 LEU 56 B SER 57 n 57 SER 57 B ASP 58 n 58 ASP 58 B TYR 59 n 59 TYR 59 B ASN 60 n 60 ASN 60 B ILE 61 n 61 ILE 61 B GLN 62 n 62 GLN 62 B LYS 63 n 63 LYS 63 B GLU 64 n 64 GLU 64 B SER 65 n 65 SER 65 B THR 66 n 66 THR 66 B LEU 67 n 67 LEU 67 B HIS 68 n 68 HIS 68 B LEU 69 n 69 LEU 69 B VAL 70 n 70 VAL 70 B LEU 71 n 71 LEU 71 B ARG 72 n 72 ARG 72 B LEU 73 n 73 LEU 73 B ARG 74 n 74 ARG 74 B GLY 75 n 75 GLY 75 B GLY 76 n 76 GLY 76 B ASP 77 n 77 ASP 77 B n 1 250 C n 2 251 C GLN 252 n 3 GLN 252 C LEU 253 n 4 LEU 253 C GLU 254 n 5 GLU 254 C ASP 255 n 6 ASP 255 C LEU 256 n 7 LEU 256 C ARG 257 n 8 ARG 257 C GLN 258 n 9 GLN 258 C GLN 259 n 10 GLN 259 C LEU 260 n 11 LEU 260 C GLN 261 n 12 GLN 261 C GLN 262 n 13 GLN 262 C ALA 263 n 14 ALA 263 C GLU 264 n 15 GLU 264 C GLU 265 n 16 GLU 265 C ALA 266 n 17 ALA 266 C LEU 267 n 18 LEU 267 C VAL 268 n 19 VAL 268 C ALA 269 n 20 ALA 269 C LYS 270 n 21 LYS 270 C GLN 271 n 22 GLN 271 C GLU 272 n 23 GLU 272 C LEU 273 n 24 LEU 273 C ILE 274 n 25 ILE 274 C ASP 275 n 26 ASP 275 C LYS 276 n 27 LYS 276 C LEU 277 n 28 LEU 277 C LYS 278 n 29 LYS 278 C GLU 279 n 30 GLU 279 C GLU 280 n 31 GLU 280 C ALA 281 n 32 ALA 281 C GLU 282 n 33 GLU 282 C GLN 283 n 34 GLN 283 C HIS 284 n 35 HIS 284 C LYS 285 n 36 LYS 285 C ILE 286 n 37 ILE 286 C VAL 287 n 38 VAL 287 C MET 288 n 39 MET 288 C GLU 289 n 40 GLU 289 C THR 290 n 41 THR 290 C VAL 291 n 42 VAL 291 C PRO 292 n 43 PRO 292 C VAL 293 n 44 VAL 293 C LEU 294 n 45 LEU 294 C LYS 295 n 46 LYS 295 C ALA 296 n 47 ALA 296 C GLN 297 n 48 GLN 297 C ALA 298 n 49 ALA 298 C ASP 299 n 50 ASP 299 C ILE 300 n 51 ILE 300 C TYR 301 n 52 TYR 301 C LYS 302 n 53 LYS 302 C ALA 303 n 54 ALA 303 C ASP 304 n 55 ASP 304 C PHE 305 n 56 PHE 305 C GLN 306 n 57 GLN 306 C ALA 307 n 58 ALA 307 C GLU 308 n 59 GLU 308 C ARG 309 n 60 ARG 309 C HIS 310 n 61 HIS 310 C ALA 311 n 62 ALA 311 C ARG 312 n 63 ARG 312 C GLU 313 n 64 GLU 313 C LYS 314 n 65 LYS 314 C LEU 315 n 66 LEU 315 C VAL 316 n 67 VAL 316 C GLU 317 n 68 GLU 317 C LYS 318 n 69 LYS 318 C LYS 319 n 70 LYS 319 C GLU 320 n 71 GLU 320 C TYR 321 n 72 TYR 321 C LEU 322 n 73 LEU 322 C GLN 323 n 74 GLN 323 C GLU 324 n 75 GLU 324 C GLN 325 n 76 GLN 325 C LEU 326 n 77 LEU 326 C GLU 327 n 78 GLU 327 C GLN 328 n 79 GLN 328 C LEU 329 n 80 LEU 329 C GLN 330 n 81 GLN 330 C ARG 331 n 82 ARG 331 C GLU 332 n 83 GLU 332 C PHE 333 n 84 PHE 333 C ASN 334 n 85 ASN 334 C n 86 335 C n 87 336 C n 88 337 C n 89 338 C n 90 339 C n 91 340 C n 92 341 C n 93 342 C n 94 343 C n 1 250 D n 2 251 D n 3 252 D n 4 253 D n 5 254 D n 6 255 D LEU 256 n 7 LEU 256 D ARG 257 n 8 ARG 257 D GLN 258 n 9 GLN 258 D GLN 259 n 10 GLN 259 D LEU 260 n 11 LEU 260 D GLN 261 n 12 GLN 261 D GLN 262 n 13 GLN 262 D ALA 263 n 14 ALA 263 D GLU 264 n 15 GLU 264 D GLU 265 n 16 GLU 265 D ALA 266 n 17 ALA 266 D LEU 267 n 18 LEU 267 D VAL 268 n 19 VAL 268 D ALA 269 n 20 ALA 269 D LYS 270 n 21 LYS 270 D GLN 271 n 22 GLN 271 D GLU 272 n 23 GLU 272 D LEU 273 n 24 LEU 273 D ILE 274 n 25 ILE 274 D ASP 275 n 26 ASP 275 D LYS 276 n 27 LYS 276 D LEU 277 n 28 LEU 277 D LYS 278 n 29 LYS 278 D GLU 279 n 30 GLU 279 D GLU 280 n 31 GLU 280 D ALA 281 n 32 ALA 281 D GLU 282 n 33 GLU 282 D GLN 283 n 34 GLN 283 D HIS 284 n 35 HIS 284 D LYS 285 n 36 LYS 285 D ILE 286 n 37 ILE 286 D VAL 287 n 38 VAL 287 D MET 288 n 39 MET 288 D GLU 289 n 40 GLU 289 D THR 290 n 41 THR 290 D VAL 291 n 42 VAL 291 D PRO 292 n 43 PRO 292 D VAL 293 n 44 VAL 293 D LEU 294 n 45 LEU 294 D LYS 295 n 46 LYS 295 D ALA 296 n 47 ALA 296 D GLN 297 n 48 GLN 297 D ALA 298 n 49 ALA 298 D ASP 299 n 50 ASP 299 D ILE 300 n 51 ILE 300 D TYR 301 n 52 TYR 301 D LYS 302 n 53 LYS 302 D ALA 303 n 54 ALA 303 D ASP 304 n 55 ASP 304 D PHE 305 n 56 PHE 305 D GLN 306 n 57 GLN 306 D ALA 307 n 58 ALA 307 D GLU 308 n 59 GLU 308 D ARG 309 n 60 ARG 309 D HIS 310 n 61 HIS 310 D ALA 311 n 62 ALA 311 D ARG 312 n 63 ARG 312 D GLU 313 n 64 GLU 313 D LYS 314 n 65 LYS 314 D LEU 315 n 66 LEU 315 D VAL 316 n 67 VAL 316 D GLU 317 n 68 GLU 317 D LYS 318 n 69 LYS 318 D LYS 319 n 70 LYS 319 D GLU 320 n 71 GLU 320 D TYR 321 n 72 TYR 321 D LEU 322 n 73 LEU 322 D GLN 323 n 74 GLN 323 D GLU 324 n 75 GLU 324 D GLN 325 n 76 GLN 325 D LEU 326 n 77 LEU 326 D GLU 327 n 78 GLU 327 D GLN 328 n 79 GLN 328 D LEU 329 n 80 LEU 329 D GLN 330 n 81 GLN 330 D ARG 331 n 82 ARG 331 D GLU 332 n 83 GLU 332 D PHE 333 n 84 PHE 333 D ASN 334 n 85 ASN 334 D LYS 335 n 86 LYS 335 D LEU 336 n 87 LEU 336 D LYS 337 n 88 LYS 337 D VAL 338 n 89 VAL 338 D GLY 339 n 90 GLY 339 D CYS 340 n 91 CYS 340 D HIS 341 n 92 HIS 341 D n 93 342 D n 94 343 D author_and_software_defined_assembly PISA 4 tetrameric 6880 -68.0 19800 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O LEU 15 A O LEU 15 A N ILE 3 A N ILE 3 A N LYS 6 A N LYS 6 A O LEU 69 A O LEU 69 A O HIS 68 A O HIS 68 A N ILE 44 A N ILE 44 A N PHE 45 A N PHE 45 A O LYS 48 A O LYS 48 B O ILE 13 B O ILE 13 B N VAL 5 B N VAL 5 B N PHE 4 B N PHE 4 B O LEU 67 B O LEU 67 B O HIS 68 B O HIS 68 B N ILE 44 B N ILE 44 B N PHE 45 B N PHE 45 B O LYS 48 B O LYS 48 1 C GLY 250 C GLY 1 1 Y 1 C MET 251 C MET 2 1 Y 1 C LYS 335 C LYS 86 1 Y 1 C LEU 336 C LEU 87 1 Y 1 C LYS 337 C LYS 88 1 Y 1 C VAL 338 C VAL 89 1 Y 1 C GLY 339 C GLY 90 1 Y 1 C CYS 340 C CYS 91 1 Y 1 C HIS 341 C HIS 92 1 Y 1 C GLU 342 C GLU 93 1 Y 1 C SER 343 C SER 94 1 Y 1 D GLY 250 D GLY 1 1 Y 1 D MET 251 D MET 2 1 Y 1 D GLN 252 D GLN 3 1 Y 1 D LEU 253 D LEU 4 1 Y 1 D GLU 254 D GLU 5 1 Y 1 D ASP 255 D ASP 6 1 Y 1 D GLU 342 D GLU 93 1 Y 1 D SER 343 D SER 94 1 Y 1 B PRO 19 -53.69 3.49 1 B ARG 54 -52.25 177.26 1 B GLN 62 -66.28 -172.87 1 B ARG 74 -43.35 -82.84 1 C PHE 333 -49.93 -72.49 1 D GLU 264 -79.77 -72.65 1 D GLU 289 -69.06 0.36 1 D LEU 315 -65.11 2.76 protein_rep.param protein.top water_rep.param water.top 82.1 -27.11 0.00 -6.73 -9.47 0.00 36.58 BULK SOLVENT MODEL USED 0.294 0.013 0.250 0.250 2.70 49.50 549 10739 5.1 92.9 RANDOM 110720.23 0.000000 1 RESTRAINED THROUGHOUT 0.0 MOLECULAR REPLACEMENT Engh & Huber FLAT MODEL 49.6733 0.35 0.47 0.39 5.00 0.42 0.53 2.70 49.50 26 2652 0 0 2626 0.007 1.2 20.8 0.73 1.34 1.50 2.26 2.00 2.66 2.00 3.67 2.50 0.363 0.041 0.349 2.87 77 1439 6 5.1 79.4 32.1 2.7 50 3JSV 11492 11492 0 0 0.066 1 14.2 31 98.8 2.7 2.75 3.8 0.216 97.9 data collection HKL-2000 phasing MOLREP refinement CNS 1.2 data reduction HKL-2000 data scaling HKL-2000 Crystal structure of mouse NEMO CoZi in complex with Lys63-linked di-ubiquitin 1 N N 2 N N 3 N N 3 N N 4 N N 4 N N 4 N N 4 N N A THR 22 A THR 22 HELX_P A GLY 35 A GLY 35 1 1 14 A PRO 37 A PRO 37 HELX_P A ASP 39 A ASP 39 5 2 3 A LEU 56 A LEU 56 HELX_P A ASN 60 A ASN 60 5 3 5 B THR 22 B THR 22 HELX_P B GLY 35 B GLY 35 1 4 14 B PRO 37 B PRO 37 HELX_P B ASP 39 B ASP 39 5 5 3 C GLN 252 C GLN 3 HELX_P C LYS 318 C LYS 69 1 6 67 C GLU 320 C GLU 71 HELX_P C GLU 332 C GLU 83 1 7 13 D LEU 256 D LEU 7 HELX_P D GLU 289 D GLU 40 1 8 34 D THR 290 D THR 41 HELX_P D LEU 336 D LEU 87 1 9 47 D LEU 336 D LEU 87 HELX_P D HIS 341 D HIS 92 1 10 6 covale 1.332 one A GLY 76 A C GLY 76 1_555 B LYS 63 B NZ LYS 63 1_555 SIGNALING PROTEIN/TRANSCRIPTION ubiquitin, coiled-coil, cellular signaling, Cytoplasm, Isopeptide bond, Nucleus, Phosphoprotein, Ubl conjugation, Coiled coil, Disulfide bond, Metal-binding, Transcription, Transcription regulation, Zinc, Zinc-finger, SIGNALING PROTEIN-TRANSCRIPTION COMPLEX UBIQ_HUMAN UNP 1 1 P62988 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG UBIQ_HUMAN UNP 2 1 P62988 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG NEMO_MOUSE UNP 3 250 O88522 GMQLEDLRQQLQQAEEALVAKQELIDKLKEEAEQHKIVMETVPVLKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQL QREFNKLKVGCHES 1 76 3JSV 1 76 P62988 A 1 1 76 1 76 3JSV 1 76 P62988 B 2 1 76 250 343 3JSV 250 343 O88522 C 3 1 94 250 343 3JSV 250 343 O88522 D 3 1 94 1 LYS engineered mutation ARG 63 3JSV A P62988 UNP 63 63 2 engineered mutation ASP 77 3JSV B P62988 UNP 77 5 5 anti-parallel parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel A THR 12 A THR 12 A GLU 16 A GLU 16 A GLN 2 A GLN 2 A LYS 6 A LYS 6 A THR 66 A THR 66 A LEU 71 A LEU 71 A GLN 41 A GLN 41 A PHE 45 A PHE 45 A LYS 48 A LYS 48 A GLN 49 A GLN 49 B THR 12 B THR 12 B GLU 16 B GLU 16 B GLN 2 B GLN 2 B THR 7 B THR 7 B THR 66 B THR 66 B LEU 71 B LEU 71 B GLN 41 B GLN 41 B PHE 45 B PHE 45 B LYS 48 B LYS 48 B GLN 49 B GLN 49 4 P 1 21 1