0.023385 0.000000 0.000000 0.000000 0.023385 0.000000 0.000000 0.000000 0.015206 0.00000 0.00000 0.00000 Pandey, N. Mirza, Z. Vikram, G. Singh, N. Bhushan, A. Kaur, P. Srinivasan, A. Sharma, S. Singh, T.P. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 42.762 42.762 65.765 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Ca 2 40.078 CALCIUM ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N CA N 75 N N N 76 R C N 77 N C N 78 N O N 79 N C N 80 N S N 81 N O N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N N N 90 S C N 91 N C N 92 N O N 93 N C N 94 N C N 95 N C N 96 N O N 97 N N N 98 N O N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N N N 110 S C N 111 N C N 112 N O N 113 N C N 114 N C N 115 N C N 116 N O N 117 N O N 118 N O N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N N N 129 N C N 130 N C N 131 N O N 132 N O N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N N N 139 S C N 140 N C N 141 N O N 142 N C Y 143 N C Y 144 N N Y 145 N C Y 146 N C Y 147 N N N 148 N O N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N O N 160 N H N 161 N H N 162 N N N 163 S C N 164 N C N 165 N O N 166 S C N 167 N C N 168 N C N 169 N C N 170 N O N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N N N 185 S C N 186 N C N 187 N O N 188 N C N 189 N C N 190 N C N 191 N C N 192 N O N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N N N 207 S C N 208 N C N 209 N O N 210 N C N 211 N C N 212 N C N 213 N C N 214 N N N 215 N O N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N N N 232 S C N 233 N C N 234 N O N 235 N C N 236 N C N 237 N S N 238 N C N 239 N O N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N N N 252 S C N 253 N C N 254 N O N 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C Y 261 N C N 262 N O N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N N N 275 S C N 276 N C N 277 N O N 278 N C N 279 N C N 280 N C N 281 N O N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N N N 292 S C N 293 N C N 294 N O N 295 N C N 296 N O N 297 N O N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N N N 306 S C N 307 N C N 308 N O N 309 R C N 310 N O N 311 N C N 312 N O N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N N N 323 S C N 324 N C N 325 N O N 326 N C Y 327 N C Y 328 N C Y 329 N C Y 330 N N Y 331 N C Y 332 N C Y 333 N C Y 334 N C Y 335 N C N 336 N O N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N N N 350 S C N 351 N C N 352 N O N 353 N C Y 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C Y 359 N C N 360 N O N 361 N O N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N N N 374 S C N 375 N C N 376 N O N 377 N C N 378 N C N 379 N C N 380 N O N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub Y 322 N sing Y 323 N sing N 324 N sing Y 325 N sing Y 326 N doub N 327 N sing Y 328 N doub N 329 N sing Y 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing Y 345 N doub Y 346 N sing Y 347 N sing N 348 N sing Y 349 N doub N 350 N sing Y 351 N doub N 352 N sing Y 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing To be Published 0353 Crystal structure of the complex formed between Phospholipase A2 with beta-amyloid fragment, Lys-Gly-Ala-Ile-Ile-Gly-Leu-Met at 1.8 A resolution 10.2210/pdb3jti/pdb pdb_00003jti 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 298 1 Mirror IMAGE PLATE 2008-04-19 MARRESEARCH Graphite SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RU300 13128.515 Phospholipase A2 isoform 3 3.1.1.4 1 nat polymer 803.046 octapeptide from Amyloid beta A4 protein UNP residues 699-706 1 syn polymer 40.078 CALCIUM ION 1 syn non-polymer 18.015 water 95 nat water Phosphatidylcholine 2-acylhydrolase P3(40) no no NLYQFKNMIQCTVPSRSWADFADYGCYCGKGGSGTPVDDLDRCCQTHDNCYNEAENISGCRPYFKTYSYECTQGTLTCKG DNNACAASVCDCDRLAAICFAGAPYNDANYNIDLKARCN NLYQFKNMIQCTVPSRSWADFADYGCYCGKGGSGTPVDDLDRCCQTHDNCYNEAENISGCRPYFKTYSYECTQGTLTCKG DNNACAASVCDCDRLAAICFAGAPYNDANYNIDLKARCN A polypeptide(L) no no KGAIIGLM KGAIIGLM B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Andaman cobra sample 195058 Naja sagittifera 1 2.16 43.00 VAPOR DIFFUSION, HANGING DROP 6.0 10MM SODIUM PHOSPHATE, 1mM CACL2, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 290K 290 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn struct_site repository Initial release Version format compliance Data collection Database references Derived calculations Refinement description 1 0 2010-07-21 1 1 2011-07-13 1 2 2023-11-01 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id complex with heptapeptide RCSB Y PDBJ 2009-09-12 REL REL CA CALCIUM ION HOH water THIS PEPTIDE WAS CHEMICALLY SYNTHESIZED. 9606 human HOMO SAPIENS sample IN CHAIN A, RESIDUE NUMBER 16 IS SIMPLY SKIPPED. THE AUTHORS BELIEVE THAT THE SEQRES IS CORRECT AND THESE MUTATIONS ARE PRESENT IN THE DEPOSITED SEQUENCE. 3GCI PDB ENTRY 3GCI PDB experimental model CA 201 3 CA CA 201 A HOH 202 4 HOH HOH 202 A HOH 203 4 HOH HOH 203 A HOH 204 4 HOH HOH 204 A HOH 205 4 HOH HOH 205 A HOH 206 4 HOH HOH 206 A HOH 207 4 HOH HOH 207 A HOH 208 4 HOH HOH 208 A HOH 209 4 HOH HOH 209 A HOH 210 4 HOH HOH 210 A HOH 212 4 HOH HOH 212 A HOH 213 4 HOH HOH 213 A HOH 214 4 HOH HOH 214 A HOH 215 4 HOH HOH 215 A HOH 217 4 HOH HOH 217 A HOH 218 4 HOH HOH 218 A HOH 219 4 HOH HOH 219 A HOH 220 4 HOH HOH 220 A HOH 221 4 HOH HOH 221 A HOH 222 4 HOH HOH 222 A HOH 223 4 HOH HOH 223 A HOH 224 4 HOH HOH 224 A HOH 225 4 HOH HOH 225 A HOH 226 4 HOH HOH 226 A HOH 227 4 HOH HOH 227 A HOH 228 4 HOH HOH 228 A HOH 229 4 HOH HOH 229 A HOH 230 4 HOH HOH 230 A HOH 231 4 HOH HOH 231 A HOH 232 4 HOH HOH 232 A HOH 233 4 HOH HOH 233 A HOH 234 4 HOH HOH 234 A HOH 235 4 HOH HOH 235 A HOH 236 4 HOH HOH 236 A HOH 237 4 HOH HOH 237 A HOH 238 4 HOH HOH 238 A HOH 239 4 HOH HOH 239 A HOH 240 4 HOH HOH 240 A HOH 241 4 HOH HOH 241 A HOH 242 4 HOH HOH 242 A HOH 243 4 HOH HOH 243 A HOH 245 4 HOH HOH 245 A HOH 246 4 HOH HOH 246 A HOH 247 4 HOH HOH 247 A HOH 248 4 HOH HOH 248 A HOH 249 4 HOH HOH 249 A HOH 250 4 HOH HOH 250 A HOH 251 4 HOH HOH 251 A HOH 252 4 HOH HOH 252 A HOH 254 4 HOH HOH 254 A HOH 255 4 HOH HOH 255 A HOH 257 4 HOH HOH 257 A HOH 258 4 HOH HOH 258 A HOH 259 4 HOH HOH 259 A HOH 260 4 HOH HOH 260 A HOH 261 4 HOH HOH 261 A HOH 262 4 HOH HOH 262 A HOH 263 4 HOH HOH 263 A HOH 264 4 HOH HOH 264 A HOH 265 4 HOH HOH 265 A HOH 266 4 HOH HOH 266 A HOH 267 4 HOH HOH 267 A HOH 268 4 HOH HOH 268 A HOH 269 4 HOH HOH 269 A HOH 270 4 HOH HOH 270 A HOH 271 4 HOH HOH 271 A HOH 272 4 HOH HOH 272 A HOH 273 4 HOH HOH 273 A HOH 274 4 HOH HOH 274 A HOH 275 4 HOH HOH 275 A HOH 276 4 HOH HOH 276 A HOH 277 4 HOH HOH 277 A HOH 278 4 HOH HOH 278 A HOH 280 4 HOH HOH 280 A HOH 281 4 HOH HOH 281 A HOH 282 4 HOH HOH 282 A HOH 283 4 HOH HOH 283 A HOH 284 4 HOH HOH 284 A HOH 285 4 HOH HOH 285 A HOH 286 4 HOH HOH 286 A HOH 289 4 HOH HOH 289 A HOH 290 4 HOH HOH 290 A HOH 292 4 HOH HOH 292 A HOH 293 4 HOH HOH 293 A HOH 294 4 HOH HOH 294 A HOH 295 4 HOH HOH 295 A HOH 296 4 HOH HOH 296 A HOH 297 4 HOH HOH 297 A HOH 298 4 HOH HOH 298 A HOH 299 4 HOH HOH 299 A HOH 300 4 HOH HOH 300 A HOH 301 4 HOH HOH 301 A HOH 302 4 HOH HOH 302 A HOH 303 4 HOH HOH 303 A HOH 279 4 HOH HOH 279 B HOH 305 4 HOH HOH 305 B ASN 1 n 1 ASN 1 A LEU 2 n 2 LEU 2 A TYR 3 n 3 TYR 3 A GLN 4 n 4 GLN 4 A PHE 5 n 5 PHE 5 A LYS 6 n 6 LYS 6 A ASN 7 n 7 ASN 7 A MET 8 n 8 MET 8 A ILE 9 n 9 ILE 9 A GLN 10 n 10 GLN 10 A CYS 11 n 11 CYS 11 A THR 12 n 12 THR 12 A VAL 13 n 13 VAL 13 A PRO 14 n 14 PRO 14 A SER 15 n 15 SER 15 A ARG 17 n 16 ARG 17 A SER 18 n 17 SER 18 A TRP 19 n 18 TRP 19 A ALA 20 n 19 ALA 20 A ASP 21 n 20 ASP 21 A PHE 22 n 21 PHE 22 A ALA 23 n 22 ALA 23 A ASP 24 n 23 ASP 24 A TYR 25 n 24 TYR 25 A GLY 26 n 25 GLY 26 A CYS 27 n 26 CYS 27 A TYR 28 n 27 TYR 28 A CYS 29 n 28 CYS 29 A GLY 30 n 29 GLY 30 A LYS 31 n 30 LYS 31 A GLY 32 n 31 GLY 32 A GLY 33 n 32 GLY 33 A SER 34 n 33 SER 34 A GLY 35 n 34 GLY 35 A THR 36 n 35 THR 36 A PRO 37 n 36 PRO 37 A VAL 38 n 37 VAL 38 A ASP 39 n 38 ASP 39 A ASP 40 n 39 ASP 40 A LEU 41 n 40 LEU 41 A ASP 42 n 41 ASP 42 A ARG 43 n 42 ARG 43 A CYS 44 n 43 CYS 44 A CYS 45 n 44 CYS 45 A GLN 46 n 45 GLN 46 A THR 47 n 46 THR 47 A HIS 48 n 47 HIS 48 A ASP 49 n 48 ASP 49 A ASN 50 n 49 ASN 50 A CYS 51 n 50 CYS 51 A TYR 52 n 51 TYR 52 A ASN 53 n 52 ASN 53 A GLU 54 n 53 GLU 54 A ALA 55 n 54 ALA 55 A GLU 56 n 55 GLU 56 A ASN 57 n 56 ASN 57 A ILE 58 n 57 ILE 58 A SER 59 n 58 SER 59 A GLY 60 n 59 GLY 60 A CYS 61 n 60 CYS 61 A ARG 62 n 61 ARG 62 A PRO 63 n 62 PRO 63 A TYR 64 n 63 TYR 64 A PHE 65 n 64 PHE 65 A LYS 66 n 65 LYS 66 A THR 67 n 66 THR 67 A TYR 68 n 67 TYR 68 A SER 69 n 68 SER 69 A TYR 70 n 69 TYR 70 A GLU 71 n 70 GLU 71 A CYS 72 n 71 CYS 72 A THR 73 n 72 THR 73 A GLN 74 n 73 GLN 74 A GLY 75 n 74 GLY 75 A THR 76 n 75 THR 76 A LEU 77 n 76 LEU 77 A THR 78 n 77 THR 78 A CYS 79 n 78 CYS 79 A LYS 80 n 79 LYS 80 A GLY 81 n 80 GLY 81 A ASP 82 n 81 ASP 82 A ASN 83 n 82 ASN 83 A ASN 84 n 83 ASN 84 A ALA 85 n 84 ALA 85 A CYS 86 n 85 CYS 86 A ALA 87 n 86 ALA 87 A ALA 88 n 87 ALA 88 A SER 89 n 88 SER 89 A VAL 90 n 89 VAL 90 A CYS 91 n 90 CYS 91 A ASP 92 n 91 ASP 92 A CYS 93 n 92 CYS 93 A ASP 94 n 93 ASP 94 A ARG 95 n 94 ARG 95 A LEU 96 n 95 LEU 96 A ALA 97 n 96 ALA 97 A ALA 98 n 97 ALA 98 A ILE 99 n 98 ILE 99 A CYS 100 n 99 CYS 100 A PHE 101 n 100 PHE 101 A ALA 102 n 101 ALA 102 A GLY 103 n 102 GLY 103 A ALA 104 n 103 ALA 104 A PRO 105 n 104 PRO 105 A TYR 106 n 105 TYR 106 A ASN 107 n 106 ASN 107 A ASP 108 n 107 ASP 108 A ALA 109 n 108 ALA 109 A ASN 110 n 109 ASN 110 A TYR 111 n 110 TYR 111 A ASN 112 n 111 ASN 112 A ILE 113 n 112 ILE 113 A ASP 114 n 113 ASP 114 A LEU 115 n 114 LEU 115 A LYS 116 n 115 LYS 116 A ALA 117 n 116 ALA 117 A ARG 118 n 117 ARG 118 A CYS 119 n 118 CYS 119 A ASN 120 n 119 ASN 120 A LYS 1 n 1 LYS 1 B GLY 2 n 2 GLY 2 B ALA 3 n 3 ALA 3 B ILE 4 n 4 ILE 4 B ILE 5 n 5 ILE 5 B GLY 6 n 6 GLY 6 B LEU 7 n 7 LEU 7 B MET 8 n 8 MET 8 B author_and_software_defined_assembly PISA 2 dimeric 990 -8 6820 A TYR 28 A O TYR 27 1_555 A CA 201 C CA CA 1_555 A GLY 30 A O GLY 29 1_555 85.4 A TYR 28 A O TYR 27 1_555 A CA 201 C CA CA 1_555 A GLY 32 A O GLY 31 1_555 78.4 A GLY 30 A O GLY 29 1_555 A CA 201 C CA CA 1_555 A GLY 32 A O GLY 31 1_555 84.4 A TYR 28 A O TYR 27 1_555 A CA 201 C CA CA 1_555 A ASP 49 A OD2 ASP 48 1_555 64.8 A GLY 30 A O GLY 29 1_555 A CA 201 C CA CA 1_555 A ASP 49 A OD2 ASP 48 1_555 150.1 A GLY 32 A O GLY 31 1_555 A CA 201 C CA CA 1_555 A ASP 49 A OD2 ASP 48 1_555 88.0 A TYR 28 A O TYR 27 1_555 A CA 201 C CA CA 1_555 A ASP 49 A OD1 ASP 48 1_555 82.2 A GLY 30 A O GLY 29 1_555 A CA 201 C CA CA 1_555 A ASP 49 A OD1 ASP 48 1_555 134.2 A GLY 32 A O GLY 31 1_555 A CA 201 C CA CA 1_555 A ASP 49 A OD1 ASP 48 1_555 134.8 A ASP 49 A OD2 ASP 48 1_555 A CA 201 C CA CA 1_555 A ASP 49 A OD1 ASP 48 1_555 46.8 A TYR 28 A O TYR 27 1_555 A CA 201 C CA CA 1_555 A HOH 221 D O HOH 1_555 115.2 A GLY 30 A O GLY 29 1_555 A CA 201 C CA CA 1_555 A HOH 221 D O HOH 1_555 148.5 A GLY 32 A O GLY 31 1_555 A CA 201 C CA CA 1_555 A HOH 221 D O HOH 1_555 77.4 A ASP 49 A OD2 ASP 48 1_555 A CA 201 C CA CA 1_555 A HOH 221 D O HOH 1_555 55.3 A ASP 49 A OD1 ASP 48 1_555 A CA 201 C CA CA 1_555 A HOH 221 D O HOH 1_555 74.7 A TYR 28 A O TYR 27 1_555 A CA 201 C CA CA 1_555 B LEU 7 B O LEU 7 1_555 132.3 A GLY 30 A O GLY 29 1_555 A CA 201 C CA CA 1_555 B LEU 7 B O LEU 7 1_555 71.7 A GLY 32 A O GLY 31 1_555 A CA 201 C CA CA 1_555 B LEU 7 B O LEU 7 1_555 137.1 A ASP 49 A OD2 ASP 48 1_555 A CA 201 C CA CA 1_555 B LEU 7 B O LEU 7 1_555 129.4 A ASP 49 A OD1 ASP 48 1_555 A CA 201 C CA CA 1_555 B LEU 7 B O LEU 7 1_555 84.8 A HOH 221 D O HOH 1_555 A CA 201 C CA CA 1_555 B LEU 7 B O LEU 7 1_555 105.0 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N TYR 25 A N TYR 24 A O CYS 29 A O CYS 28 A N GLU 71 A N GLU 70 A O THR 78 A O THR 77 1 B B GLY ALA 2 3 -137.62 1 -9.82 1.60 122.70 112.88 A A A O C N SER SER ARG 15 15 17 Y 1 22.30 2.50 121.70 144.00 B B B C N CA GLY ALA ALA 2 3 3 Y 1 A SER 15 -71.80 43.32 1 A ARG 17 178.61 135.66 1 B ALA 3 -115.90 -72.16 1 B ILE 4 -154.33 -158.51 1 B ILE 5 -142.43 -65.65 34.703 -0.23 0.00 0.00 -0.23 0.00 0.46 0.962 0.951 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.21019 0.17097 0.17291 1.80 35.85 522 10374 10374 4.8 98.42 2.662 0.083 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.131 0.124 0.80 0.80 1.40 PDB ENTRY 3GCI MAXIMUM LIKELIHOOD MASK 1.80 35.85 95 1059 1 0 963 0.024 0.022 987 1.980 1.936 1337 6.680 5.000 124 33.683 24.898 49 16.432 15.000 150 17.208 15.000 5 0.139 0.200 138 0.010 0.021 769 1.393 1.500 625 2.725 2.000 989 4.133 3.000 362 6.370 4.500 348 0.535 0.342 1.844 27 761 20 96.33 1.8 42.8 3JTI 10374 10374 0.0 0.0 0.042 1 14.4 98.4 1.76 1.8 3.0 0.164 96.8 data collection HKL-2000 phasing AMoRE refinement REFMAC 5.5.0072 data reduction DENZO data scaling SCALEPACK Crystal structure of the complex formed between Phospholipase A2 with beta-amyloid fragment, Lys-Gly-Ala-Ile-Ile-Gly-Leu-Met at 1.8 A resolution 1 N N 2 N N 3 N N 4 N N 4 N N A ASN 1 A ASN 1 HELX_P A VAL 13 A VAL 13 1 1 13 A SER 18 A SER 17 HELX_P A PHE 22 A PHE 21 5 2 5 A ASP 39 A ASP 38 HELX_P A GLU 56 A GLU 55 1 3 18 A ASN 84 A ASN 83 HELX_P A ALA 104 A ALA 103 1 4 21 A ASN 107 A ASN 106 HELX_P A TYR 111 A TYR 110 5 5 5 A ASP 114 A ASP 113 HELX_P A CYS 119 A CYS 118 1 6 6 disulf 2.064 A CYS 11 A SG CYS 11 1_555 A CYS 72 A SG CYS 71 1_555 disulf 1.996 A CYS 27 A SG CYS 26 1_555 A CYS 119 A SG CYS 118 1_555 disulf 2.065 A CYS 29 A SG CYS 28 1_555 A CYS 45 A SG CYS 44 1_555 disulf 2.062 A CYS 44 A SG CYS 43 1_555 A CYS 100 A SG CYS 99 1_555 disulf 2.078 A CYS 51 A SG CYS 50 1_555 A CYS 93 A SG CYS 92 1_555 disulf 2.011 A CYS 61 A SG CYS 60 1_555 A CYS 86 A SG CYS 85 1_555 disulf 2.075 A CYS 79 A SG CYS 78 1_555 A CYS 91 A SG CYS 90 1_555 metalc 2.642 A TYR 28 A O TYR 27 1_555 A CA 201 C CA CA 1_555 metalc 2.520 A GLY 30 A O GLY 29 1_555 A CA 201 C CA CA 1_555 metalc 2.292 A GLY 32 A O GLY 31 1_555 A CA 201 C CA CA 1_555 metalc 2.649 A ASP 49 A OD2 ASP 48 1_555 A CA 201 C CA CA 1_555 metalc 2.829 A ASP 49 A OD1 ASP 48 1_555 A CA 201 C CA CA 1_555 metalc 2.789 A CA 201 C CA CA 1_555 A HOH 221 D O HOH 1_555 metalc 2.399 A CA 201 C CA CA 1_555 B LEU 7 B O LEU 7 1_555 HYDROLASE PHOSPHOLIPASE A2, HEPTAPEPTIDE, AMYLOID BETA, HYDROLASE, LIPID DEGRADATION, Disulfide bond, Metal-binding, Secreted, Amyloid, Amyloidosis, Protease inhibitor, Proteoglycan, Serine protease inhibitor B ILE 4 B ILE 4 1 B ILE 5 B ILE 5 -6.98 B GLY 6 B GLY 6 1 B LEU 7 B LEU 7 -18.64 PA23_NAJSG UNP 1 8 P60045 NLYQFKNMIQCTVPSRSWQDFADYGCYCGKGGSGTPVDDLDRCCQVHDNCYNEAENISGCRPYFKTYSYECTQGTLTCKG DNNACAASVCDCDRLAAICFAGAPYNDANYNIDLKARCN A4_HUMAN UNP 2 699 P05067 KGAIIGLM 8 126 3JTI 1 120 P60045 A 1 1 119 699 706 3JTI 1 8 P05067 B 2 1 8 1 GLN SEE REMARK 999 ALA 20 3JTI A P60045 UNP 26 19 1 VAL SEE REMARK 999 THR 47 3JTI A P60045 UNP 53 46 2 2 anti-parallel anti-parallel A ASP 24 A ASP 23 A TYR 25 A TYR 24 A CYS 29 A CYS 28 A GLY 30 A GLY 29 A TYR 70 A TYR 69 A THR 73 A THR 72 A THR 76 A THR 75 A CYS 79 A CYS 78 BINDING SITE FOR RESIDUE CA A 201 A CA 201 Software 7 A TYR 28 A TYR 27 7 1_555 A GLY 30 A GLY 29 7 1_555 A GLY 32 A GLY 31 7 1_555 A ASP 49 A ASP 48 7 1_555 A HOH 221 D HOH 7 1_555 B LEU 7 B LEU 7 7 1_555 B MET 8 B MET 8 7 1_555 76 P 41