0.008300
0.000000
0.000647
0.000000
0.015824
0.000000
0.000000
0.000000
0.028069
0.00000
0.00000
0.00000
Hoeppner, A.
Schomburg, D.
Niefind, K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
94.39
90.00
120.82
63.25
35.73
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C21 H27 N7 O14 P2
663.425
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C7 H12 O6
192.167
(1S,3R,4S,5R)-1,3,4,5-tetrahydroxycyclohexanecarboxylic acid
Quinic acid
non-polymer
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
S
P
N
251
N
O
N
252
N
O
N
253
N
O
N
254
N
C
N
255
R
C
N
256
N
O
N
257
S
C
N
258
N
O
N
259
R
C
N
260
N
O
N
261
R
C
Y
262
N
N
Y
263
N
C
Y
264
N
N
Y
265
N
C
Y
266
N
C
N
267
N
N
Y
268
N
N
Y
269
N
C
Y
270
N
N
Y
271
N
C
N
272
N
O
N
273
N
P
N
274
N
O
N
275
N
O
N
276
N
O
N
277
N
C
N
278
R
C
N
279
N
O
N
280
S
C
N
281
N
O
N
282
R
C
N
283
N
O
N
284
R
C
Y
285
N
N
Y
286
N
C
Y
287
N
C
N
288
N
C
N
289
N
O
N
290
N
N
Y
291
N
C
Y
292
N
C
Y
293
N
C
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
C
Y
330
N
C
Y
331
N
C
N
332
N
O
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
N
N
345
S
C
N
346
N
C
N
347
N
O
N
348
N
C
N
349
N
C
N
350
N
C
N
351
N
O
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
C
N
362
N
O
N
363
N
C
N
364
N
O
N
365
R
C
N
366
N
O
N
367
N
C
N
368
N
O
N
369
R
C
N
370
N
O
N
371
N
C
N
372
N
O
N
373
N
C
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
N
N
387
S
C
N
388
N
C
N
389
N
O
N
390
N
C
N
391
N
O
N
392
N
O
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
N
N
401
S
C
N
402
N
C
N
403
N
O
N
404
R
C
N
405
N
O
N
406
N
C
N
407
N
O
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
N
N
418
S
C
N
419
N
C
N
420
N
O
N
421
N
C
Y
422
N
C
Y
423
N
C
Y
424
N
C
Y
425
N
N
Y
426
N
C
Y
427
N
C
Y
428
N
C
Y
429
N
C
Y
430
N
C
N
431
N
O
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
N
N
445
S
C
N
446
N
C
N
447
N
O
N
448
N
C
Y
449
N
C
Y
450
N
C
Y
451
N
C
Y
452
N
C
Y
453
N
C
Y
454
N
C
N
455
N
O
N
456
N
O
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
N
N
469
S
C
N
470
N
C
N
471
N
O
N
472
N
C
N
473
N
C
N
474
N
C
N
475
N
O
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
H
N
486
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
Y
260
N
sing
Y
261
N
sing
Y
262
N
doub
N
263
N
sing
Y
264
N
sing
Y
265
N
sing
Y
266
N
doub
N
267
N
sing
Y
268
N
doub
N
269
N
sing
N
270
N
sing
Y
271
N
sing
Y
272
N
doub
N
273
N
sing
Y
274
N
sing
N
275
N
sing
N
276
N
doub
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
Y
297
N
sing
Y
298
N
doub
Y
299
N
doub
N
300
N
sing
N
301
N
sing
Y
302
N
sing
N
303
N
doub
N
304
N
sing
N
305
N
sing
N
306
N
sing
Y
307
N
doub
N
308
N
sing
Y
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
doub
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
Y
323
N
doub
Y
324
N
sing
Y
325
N
sing
N
326
N
sing
Y
327
N
doub
N
328
N
sing
Y
329
N
doub
N
330
N
sing
Y
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
doub
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
doub
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
doub
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
doub
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
doub
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
Y
417
N
doub
Y
418
N
sing
Y
419
N
sing
N
420
N
sing
Y
421
N
doub
Y
422
N
sing
Y
423
N
sing
N
424
N
sing
Y
425
N
sing
Y
426
N
doub
N
427
N
sing
Y
428
N
doub
N
429
N
sing
Y
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
doub
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
Y
445
N
doub
Y
446
N
sing
Y
447
N
sing
N
448
N
sing
Y
449
N
doub
N
450
N
sing
Y
451
N
doub
N
452
N
sing
Y
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
doub
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
GE
Biol.Chem.
1431-6730
394
1505
1516
10.1515/hsz-2013-0170
23929881
Enzyme-substrate complexes of the quinate/shikimate dehydrogenase from Corynebacterium glutamicum enable new insights in substrate and cofactor binding, specificity, and discrimination.
2013
10.2210/pdb3jyp/pdb
pdb_00003jyp
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
IMAGE PLATE
2007-10-05
MAR scanner 345 mm plate
SINGLE WAVELENGTH
M
x-ray
1
0.9000
1.0
X12
EMBL/DESY, HAMBURG
0.9000
SYNCHROTRON
EMBL/DESY, HAMBURG BEAMLINE X12
29724.580
Quinate/shikimate dehydrogenase
1.1.1.24, 1.1.1.-
QDH
1
man
polymer
663.425
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
1
syn
non-polymer
192.167
(1S,3R,4S,5R)-1,3,4,5-tetrahydroxycyclohexanecarboxylic acid
1
syn
non-polymer
18.015
water
369
nat
water
NAD(+)-dependent quinate dehydrogenase, QDH, CglQDH
no
no
MNDSILLGLIGQGLDLSRTPAMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALYLGFNGLNITHPYKQAVLPLL
DEVSEQATQLGAVNTVVIDATGHTTGHNTDVSGFGRGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD
TSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVYMPIETELLKA
ARALGCETLDGTRMAIHQAVDAFRLFTGLEPDVSRMRETFLSL
MNDSILLGLIGQGLDLSRTPAMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALYLGFNGLNITHPYKQAVLPLL
DEVSEQATQLGAVNTVVIDATGHTTGHNTDVSGFGRGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD
TSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVYMPIETELLKA
ARALGCETLDGTRMAIHQAVDAFRLFTGLEPDVSRMRETFLSL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Brevibacterium flavum
ATCC13032
sample
aroE, cg0504, Cgl0424
196627
Corynebacterium glutamicum
511693
Escherichia coli
BL21
plasmide
pNHis
1
2.29
46.28
VAPOR DIFFUSION, SITTING DROP
9.5
24 % PEG 6000, 400 mM calcium chloride, 100 mM Tris/HCl, pH 9.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
293
chem_comp_atom
chem_comp_bond
database_2
diffrn_source
pdbx_initial_refinement_model
struct_site
repository
Initial release
Version format compliance
Database references
Database references
Data collection
Database references
Derived calculations
Refinement description
1
0
2010-10-27
1
1
2011-07-13
1
2
2013-09-04
1
3
2013-10-23
1
4
2023-09-06
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_diffrn_source.pdbx_synchrotron_site
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
The same protein with glycerol bound to the active site.
The same protein in complex with NAD.
The same protein in complex with shikimate and NADH.
RCSB
Y
RCSB
2009-09-22
REL
REL
NAD
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
QIC
(1S,3R,4S,5R)-1,3,4,5-tetrahydroxycyclohexanecarboxylic acid
HOH
water
3JYO
PDB
experimental model
NAD
377
2
NAD
NAD
377
A
QIC
1
3
QIC
QIC
284
A
HOH
285
4
HOH
HOH
285
A
HOH
286
4
HOH
HOH
286
A
HOH
287
4
HOH
HOH
287
A
HOH
288
4
HOH
HOH
288
A
HOH
289
4
HOH
HOH
289
A
HOH
290
4
HOH
HOH
290
A
HOH
291
4
HOH
HOH
291
A
HOH
292
4
HOH
HOH
292
A
HOH
293
4
HOH
HOH
293
A
HOH
294
4
HOH
HOH
294
A
HOH
295
4
HOH
HOH
295
A
HOH
296
4
HOH
HOH
296
A
HOH
297
4
HOH
HOH
297
A
HOH
298
4
HOH
HOH
298
A
HOH
299
4
HOH
HOH
299
A
HOH
300
4
HOH
HOH
300
A
HOH
301
4
HOH
HOH
301
A
HOH
302
4
HOH
HOH
302
A
HOH
303
4
HOH
HOH
303
A
HOH
304
4
HOH
HOH
304
A
HOH
305
4
HOH
HOH
305
A
HOH
306
4
HOH
HOH
306
A
HOH
307
4
HOH
HOH
307
A
HOH
308
4
HOH
HOH
308
A
HOH
309
4
HOH
HOH
309
A
HOH
310
4
HOH
HOH
310
A
HOH
311
4
HOH
HOH
311
A
HOH
312
4
HOH
HOH
312
A
HOH
313
4
HOH
HOH
313
A
HOH
314
4
HOH
HOH
314
A
HOH
315
4
HOH
HOH
315
A
HOH
316
4
HOH
HOH
316
A
HOH
317
4
HOH
HOH
317
A
HOH
318
4
HOH
HOH
318
A
HOH
319
4
HOH
HOH
319
A
HOH
320
4
HOH
HOH
320
A
HOH
321
4
HOH
HOH
321
A
HOH
322
4
HOH
HOH
322
A
HOH
323
4
HOH
HOH
323
A
HOH
324
4
HOH
HOH
324
A
HOH
325
4
HOH
HOH
325
A
HOH
326
4
HOH
HOH
326
A
HOH
327
4
HOH
HOH
327
A
HOH
328
4
HOH
HOH
328
A
HOH
329
4
HOH
HOH
329
A
HOH
330
4
HOH
HOH
330
A
HOH
331
4
HOH
HOH
331
A
HOH
332
4
HOH
HOH
332
A
HOH
333
4
HOH
HOH
333
A
HOH
334
4
HOH
HOH
334
A
HOH
335
4
HOH
HOH
335
A
HOH
336
4
HOH
HOH
336
A
HOH
337
4
HOH
HOH
337
A
HOH
338
4
HOH
HOH
338
A
HOH
339
4
HOH
HOH
339
A
HOH
340
4
HOH
HOH
340
A
HOH
341
4
HOH
HOH
341
A
HOH
342
4
HOH
HOH
342
A
HOH
343
4
HOH
HOH
343
A
HOH
344
4
HOH
HOH
344
A
HOH
345
4
HOH
HOH
345
A
HOH
346
4
HOH
HOH
346
A
HOH
347
4
HOH
HOH
347
A
HOH
348
4
HOH
HOH
348
A
HOH
349
4
HOH
HOH
349
A
HOH
350
4
HOH
HOH
350
A
HOH
351
4
HOH
HOH
351
A
HOH
352
4
HOH
HOH
352
A
HOH
353
4
HOH
HOH
353
A
HOH
354
4
HOH
HOH
354
A
HOH
355
4
HOH
HOH
355
A
HOH
356
4
HOH
HOH
356
A
HOH
357
4
HOH
HOH
357
A
HOH
358
4
HOH
HOH
358
A
HOH
359
4
HOH
HOH
359
A
HOH
360
4
HOH
HOH
360
A
HOH
361
4
HOH
HOH
361
A
HOH
362
4
HOH
HOH
362
A
HOH
363
4
HOH
HOH
363
A
HOH
364
4
HOH
HOH
364
A
HOH
365
4
HOH
HOH
365
A
HOH
366
4
HOH
HOH
366
A
HOH
367
4
HOH
HOH
367
A
HOH
368
4
HOH
HOH
368
A
HOH
369
4
HOH
HOH
369
A
HOH
1
4
HOH
HOH
370
A
HOH
2
4
HOH
HOH
371
A
HOH
3
4
HOH
HOH
372
A
HOH
4
4
HOH
HOH
373
A
HOH
5
4
HOH
HOH
374
A
HOH
6
4
HOH
HOH
375
A
HOH
7
4
HOH
HOH
376
A
HOH
8
4
HOH
HOH
378
A
HOH
9
4
HOH
HOH
379
A
HOH
10
4
HOH
HOH
380
A
HOH
11
4
HOH
HOH
381
A
HOH
12
4
HOH
HOH
382
A
HOH
13
4
HOH
HOH
383
A
HOH
14
4
HOH
HOH
384
A
HOH
15
4
HOH
HOH
385
A
HOH
16
4
HOH
HOH
386
A
HOH
17
4
HOH
HOH
387
A
HOH
18
4
HOH
HOH
388
A
HOH
19
4
HOH
HOH
389
A
HOH
20
4
HOH
HOH
390
A
HOH
21
4
HOH
HOH
391
A
HOH
22
4
HOH
HOH
392
A
HOH
23
4
HOH
HOH
393
A
HOH
24
4
HOH
HOH
394
A
HOH
25
4
HOH
HOH
395
A
HOH
26
4
HOH
HOH
396
A
HOH
27
4
HOH
HOH
397
A
HOH
28
4
HOH
HOH
398
A
HOH
29
4
HOH
HOH
399
A
HOH
30
4
HOH
HOH
400
A
HOH
31
4
HOH
HOH
401
A
HOH
32
4
HOH
HOH
402
A
HOH
33
4
HOH
HOH
403
A
HOH
34
4
HOH
HOH
404
A
HOH
35
4
HOH
HOH
405
A
HOH
36
4
HOH
HOH
406
A
HOH
37
4
HOH
HOH
407
A
HOH
38
4
HOH
HOH
408
A
HOH
39
4
HOH
HOH
409
A
HOH
40
4
HOH
HOH
410
A
HOH
41
4
HOH
HOH
411
A
HOH
42
4
HOH
HOH
412
A
HOH
43
4
HOH
HOH
413
A
HOH
44
4
HOH
HOH
414
A
HOH
45
4
HOH
HOH
415
A
HOH
46
4
HOH
HOH
416
A
HOH
47
4
HOH
HOH
417
A
HOH
48
4
HOH
HOH
418
A
HOH
49
4
HOH
HOH
419
A
HOH
50
4
HOH
HOH
420
A
HOH
51
4
HOH
HOH
421
A
HOH
52
4
HOH
HOH
422
A
HOH
53
4
HOH
HOH
423
A
HOH
54
4
HOH
HOH
424
A
HOH
55
4
HOH
HOH
425
A
HOH
56
4
HOH
HOH
426
A
HOH
57
4
HOH
HOH
427
A
HOH
58
4
HOH
HOH
428
A
HOH
59
4
HOH
HOH
429
A
HOH
60
4
HOH
HOH
430
A
HOH
61
4
HOH
HOH
431
A
HOH
62
4
HOH
HOH
432
A
HOH
63
4
HOH
HOH
433
A
HOH
64
4
HOH
HOH
434
A
HOH
65
4
HOH
HOH
435
A
HOH
66
4
HOH
HOH
436
A
HOH
67
4
HOH
HOH
437
A
HOH
68
4
HOH
HOH
438
A
HOH
69
4
HOH
HOH
439
A
HOH
70
4
HOH
HOH
440
A
HOH
71
4
HOH
HOH
441
A
HOH
72
4
HOH
HOH
442
A
HOH
73
4
HOH
HOH
443
A
HOH
74
4
HOH
HOH
444
A
HOH
75
4
HOH
HOH
445
A
HOH
76
4
HOH
HOH
446
A
HOH
77
4
HOH
HOH
447
A
HOH
78
4
HOH
HOH
448
A
HOH
79
4
HOH
HOH
449
A
HOH
80
4
HOH
HOH
450
A
HOH
81
4
HOH
HOH
451
A
HOH
82
4
HOH
HOH
452
A
HOH
83
4
HOH
HOH
453
A
HOH
84
4
HOH
HOH
454
A
HOH
85
4
HOH
HOH
455
A
HOH
86
4
HOH
HOH
456
A
HOH
87
4
HOH
HOH
457
A
HOH
88
4
HOH
HOH
458
A
HOH
89
4
HOH
HOH
459
A
HOH
90
4
HOH
HOH
460
A
HOH
91
4
HOH
HOH
461
A
HOH
92
4
HOH
HOH
462
A
HOH
93
4
HOH
HOH
463
A
HOH
94
4
HOH
HOH
464
A
HOH
95
4
HOH
HOH
465
A
HOH
96
4
HOH
HOH
466
A
HOH
97
4
HOH
HOH
467
A
HOH
98
4
HOH
HOH
468
A
HOH
99
4
HOH
HOH
469
A
HOH
100
4
HOH
HOH
470
A
HOH
101
4
HOH
HOH
471
A
HOH
102
4
HOH
HOH
472
A
HOH
103
4
HOH
HOH
473
A
HOH
104
4
HOH
HOH
474
A
HOH
105
4
HOH
HOH
475
A
HOH
106
4
HOH
HOH
476
A
HOH
107
4
HOH
HOH
477
A
HOH
108
4
HOH
HOH
478
A
HOH
109
4
HOH
HOH
479
A
HOH
110
4
HOH
HOH
480
A
HOH
111
4
HOH
HOH
481
A
HOH
112
4
HOH
HOH
482
A
HOH
113
4
HOH
HOH
483
A
HOH
114
4
HOH
HOH
484
A
HOH
115
4
HOH
HOH
485
A
HOH
116
4
HOH
HOH
486
A
HOH
117
4
HOH
HOH
487
A
HOH
118
4
HOH
HOH
488
A
HOH
119
4
HOH
HOH
489
A
HOH
120
4
HOH
HOH
490
A
HOH
121
4
HOH
HOH
491
A
HOH
122
4
HOH
HOH
492
A
HOH
123
4
HOH
HOH
493
A
HOH
124
4
HOH
HOH
494
A
HOH
125
4
HOH
HOH
495
A
HOH
126
4
HOH
HOH
496
A
HOH
127
4
HOH
HOH
497
A
HOH
128
4
HOH
HOH
498
A
HOH
129
4
HOH
HOH
499
A
HOH
130
4
HOH
HOH
500
A
HOH
131
4
HOH
HOH
501
A
HOH
132
4
HOH
HOH
502
A
HOH
133
4
HOH
HOH
503
A
HOH
134
4
HOH
HOH
504
A
HOH
135
4
HOH
HOH
505
A
HOH
136
4
HOH
HOH
506
A
HOH
137
4
HOH
HOH
507
A
HOH
138
4
HOH
HOH
508
A
HOH
139
4
HOH
HOH
509
A
HOH
140
4
HOH
HOH
510
A
HOH
141
4
HOH
HOH
511
A
HOH
142
4
HOH
HOH
512
A
HOH
143
4
HOH
HOH
513
A
HOH
144
4
HOH
HOH
514
A
HOH
145
4
HOH
HOH
515
A
HOH
146
4
HOH
HOH
516
A
HOH
147
4
HOH
HOH
517
A
HOH
148
4
HOH
HOH
518
A
HOH
149
4
HOH
HOH
519
A
HOH
150
4
HOH
HOH
520
A
HOH
151
4
HOH
HOH
521
A
HOH
152
4
HOH
HOH
522
A
HOH
153
4
HOH
HOH
523
A
HOH
154
4
HOH
HOH
524
A
HOH
155
4
HOH
HOH
525
A
HOH
156
4
HOH
HOH
526
A
HOH
157
4
HOH
HOH
527
A
HOH
158
4
HOH
HOH
528
A
HOH
159
4
HOH
HOH
529
A
HOH
160
4
HOH
HOH
530
A
HOH
161
4
HOH
HOH
531
A
HOH
162
4
HOH
HOH
532
A
HOH
163
4
HOH
HOH
533
A
HOH
164
4
HOH
HOH
534
A
HOH
165
4
HOH
HOH
535
A
HOH
166
4
HOH
HOH
536
A
HOH
167
4
HOH
HOH
537
A
HOH
168
4
HOH
HOH
538
A
HOH
169
4
HOH
HOH
539
A
HOH
170
4
HOH
HOH
540
A
HOH
171
4
HOH
HOH
541
A
HOH
172
4
HOH
HOH
542
A
HOH
173
4
HOH
HOH
543
A
HOH
174
4
HOH
HOH
544
A
HOH
175
4
HOH
HOH
545
A
HOH
176
4
HOH
HOH
546
A
HOH
177
4
HOH
HOH
547
A
HOH
178
4
HOH
HOH
548
A
HOH
179
4
HOH
HOH
549
A
HOH
180
4
HOH
HOH
550
A
HOH
181
4
HOH
HOH
551
A
HOH
182
4
HOH
HOH
552
A
HOH
183
4
HOH
HOH
553
A
HOH
184
4
HOH
HOH
554
A
HOH
185
4
HOH
HOH
555
A
HOH
186
4
HOH
HOH
556
A
HOH
187
4
HOH
HOH
557
A
HOH
188
4
HOH
HOH
558
A
HOH
189
4
HOH
HOH
559
A
HOH
190
4
HOH
HOH
560
A
HOH
191
4
HOH
HOH
561
A
HOH
192
4
HOH
HOH
562
A
HOH
193
4
HOH
HOH
563
A
HOH
194
4
HOH
HOH
564
A
HOH
195
4
HOH
HOH
565
A
HOH
196
4
HOH
HOH
566
A
HOH
197
4
HOH
HOH
567
A
HOH
198
4
HOH
HOH
568
A
HOH
199
4
HOH
HOH
569
A
HOH
200
4
HOH
HOH
570
A
HOH
201
4
HOH
HOH
571
A
HOH
202
4
HOH
HOH
572
A
HOH
203
4
HOH
HOH
573
A
HOH
204
4
HOH
HOH
574
A
HOH
205
4
HOH
HOH
575
A
HOH
206
4
HOH
HOH
576
A
HOH
207
4
HOH
HOH
577
A
HOH
208
4
HOH
HOH
578
A
HOH
209
4
HOH
HOH
579
A
HOH
210
4
HOH
HOH
580
A
HOH
211
4
HOH
HOH
581
A
HOH
212
4
HOH
HOH
582
A
HOH
213
4
HOH
HOH
583
A
HOH
214
4
HOH
HOH
584
A
HOH
215
4
HOH
HOH
585
A
HOH
216
4
HOH
HOH
586
A
HOH
217
4
HOH
HOH
587
A
HOH
218
4
HOH
HOH
588
A
HOH
219
4
HOH
HOH
589
A
HOH
220
4
HOH
HOH
590
A
HOH
221
4
HOH
HOH
591
A
HOH
222
4
HOH
HOH
592
A
HOH
223
4
HOH
HOH
593
A
HOH
224
4
HOH
HOH
594
A
HOH
225
4
HOH
HOH
595
A
HOH
226
4
HOH
HOH
596
A
HOH
227
4
HOH
HOH
597
A
HOH
228
4
HOH
HOH
598
A
HOH
229
4
HOH
HOH
599
A
HOH
230
4
HOH
HOH
600
A
HOH
231
4
HOH
HOH
601
A
HOH
232
4
HOH
HOH
602
A
HOH
233
4
HOH
HOH
603
A
HOH
234
4
HOH
HOH
604
A
HOH
235
4
HOH
HOH
605
A
HOH
236
4
HOH
HOH
606
A
HOH
237
4
HOH
HOH
607
A
HOH
238
4
HOH
HOH
608
A
HOH
239
4
HOH
HOH
609
A
HOH
240
4
HOH
HOH
610
A
HOH
241
4
HOH
HOH
611
A
HOH
242
4
HOH
HOH
612
A
HOH
243
4
HOH
HOH
613
A
HOH
244
4
HOH
HOH
614
A
HOH
245
4
HOH
HOH
615
A
HOH
246
4
HOH
HOH
616
A
HOH
247
4
HOH
HOH
617
A
HOH
248
4
HOH
HOH
618
A
HOH
249
4
HOH
HOH
619
A
HOH
250
4
HOH
HOH
620
A
HOH
251
4
HOH
HOH
621
A
HOH
252
4
HOH
HOH
622
A
HOH
253
4
HOH
HOH
623
A
HOH
254
4
HOH
HOH
624
A
HOH
255
4
HOH
HOH
625
A
HOH
256
4
HOH
HOH
626
A
HOH
257
4
HOH
HOH
627
A
HOH
258
4
HOH
HOH
628
A
HOH
259
4
HOH
HOH
629
A
HOH
260
4
HOH
HOH
630
A
HOH
261
4
HOH
HOH
631
A
HOH
262
4
HOH
HOH
632
A
HOH
263
4
HOH
HOH
633
A
HOH
264
4
HOH
HOH
634
A
HOH
265
4
HOH
HOH
635
A
HOH
266
4
HOH
HOH
636
A
HOH
267
4
HOH
HOH
637
A
HOH
268
4
HOH
HOH
638
A
HOH
269
4
HOH
HOH
639
A
HOH
270
4
HOH
HOH
640
A
HOH
271
4
HOH
HOH
641
A
HOH
272
4
HOH
HOH
642
A
HOH
273
4
HOH
HOH
643
A
HOH
274
4
HOH
HOH
644
A
HOH
275
4
HOH
HOH
645
A
HOH
276
4
HOH
HOH
646
A
HOH
277
4
HOH
HOH
647
A
HOH
278
4
HOH
HOH
648
A
HOH
279
4
HOH
HOH
649
A
HOH
280
4
HOH
HOH
650
A
HOH
281
4
HOH
HOH
651
A
HOH
282
4
HOH
HOH
652
A
HOH
283
4
HOH
HOH
653
A
HOH
284
4
HOH
HOH
654
A
n
1
1
A
ASN
2
n
2
ASN
2
A
ASP
3
n
3
ASP
3
A
SER
4
n
4
SER
4
A
ILE
5
n
5
ILE
5
A
LEU
6
n
6
LEU
6
A
LEU
7
n
7
LEU
7
A
GLY
8
n
8
GLY
8
A
LEU
9
n
9
LEU
9
A
ILE
10
n
10
ILE
10
A
GLY
11
n
11
GLY
11
A
GLN
12
n
12
GLN
12
A
GLY
13
n
13
GLY
13
A
LEU
14
n
14
LEU
14
A
ASP
15
n
15
ASP
15
A
LEU
16
n
16
LEU
16
A
SER
17
n
17
SER
17
A
ARG
18
n
18
ARG
18
A
THR
19
n
19
THR
19
A
PRO
20
n
20
PRO
20
A
ALA
21
n
21
ALA
21
A
MET
22
n
22
MET
22
A
HIS
23
n
23
HIS
23
A
GLU
24
n
24
GLU
24
A
ALA
25
n
25
ALA
25
A
GLU
26
n
26
GLU
26
A
GLY
27
n
27
GLY
27
A
LEU
28
n
28
LEU
28
A
ALA
29
n
29
ALA
29
A
GLN
30
n
30
GLN
30
A
GLY
31
n
31
GLY
31
A
ARG
32
n
32
ARG
32
A
ALA
33
n
33
ALA
33
A
THR
34
n
34
THR
34
A
VAL
35
n
35
VAL
35
A
TYR
36
n
36
TYR
36
A
ARG
37
n
37
ARG
37
A
ARG
38
n
38
ARG
38
A
ILE
39
n
39
ILE
39
A
ASP
40
n
40
ASP
40
A
THR
41
n
41
THR
41
A
LEU
42
n
42
LEU
42
A
GLY
43
n
43
GLY
43
A
SER
44
n
44
SER
44
A
ARG
45
n
45
ARG
45
A
ALA
46
n
46
ALA
46
A
SER
47
n
47
SER
47
A
GLY
48
n
48
GLY
48
A
GLN
49
n
49
GLN
49
A
ASP
50
n
50
ASP
50
A
LEU
51
n
51
LEU
51
A
LYS
52
n
52
LYS
52
A
THR
53
n
53
THR
53
A
LEU
54
n
54
LEU
54
A
LEU
55
n
55
LEU
55
A
ASP
56
n
56
ASP
56
A
ALA
57
n
57
ALA
57
A
ALA
58
n
58
ALA
58
A
LEU
59
n
59
LEU
59
A
TYR
60
n
60
TYR
60
A
LEU
61
n
61
LEU
61
A
GLY
62
n
62
GLY
62
A
PHE
63
n
63
PHE
63
A
ASN
64
n
64
ASN
64
A
GLY
65
n
65
GLY
65
A
LEU
66
n
66
LEU
66
A
ASN
67
n
67
ASN
67
A
ILE
68
n
68
ILE
68
A
THR
69
n
69
THR
69
A
HIS
70
n
70
HIS
70
A
PRO
71
n
71
PRO
71
A
TYR
72
n
72
TYR
72
A
LYS
73
n
73
LYS
73
A
GLN
74
n
74
GLN
74
A
ALA
75
n
75
ALA
75
A
VAL
76
n
76
VAL
76
A
LEU
77
n
77
LEU
77
A
PRO
78
n
78
PRO
78
A
LEU
79
n
79
LEU
79
A
LEU
80
n
80
LEU
80
A
ASP
81
n
81
ASP
81
A
GLU
82
n
82
GLU
82
A
VAL
83
n
83
VAL
83
A
SER
84
n
84
SER
84
A
GLU
85
n
85
GLU
85
A
GLN
86
n
86
GLN
86
A
ALA
87
n
87
ALA
87
A
THR
88
n
88
THR
88
A
GLN
89
n
89
GLN
89
A
LEU
90
n
90
LEU
90
A
GLY
91
n
91
GLY
91
A
ALA
92
n
92
ALA
92
A
VAL
93
n
93
VAL
93
A
ASN
94
n
94
ASN
94
A
THR
95
n
95
THR
95
A
VAL
96
n
96
VAL
96
A
VAL
97
n
97
VAL
97
A
ILE
98
n
98
ILE
98
A
ASP
99
n
99
ASP
99
A
ALA
100
n
100
ALA
100
A
THR
101
n
101
THR
101
A
GLY
102
n
102
GLY
102
A
HIS
103
n
103
HIS
103
A
THR
104
n
104
THR
104
A
THR
105
n
105
THR
105
A
GLY
106
n
106
GLY
106
A
HIS
107
n
107
HIS
107
A
ASN
108
n
108
ASN
108
A
THR
109
n
109
THR
109
A
ASP
110
n
110
ASP
110
A
VAL
111
n
111
VAL
111
A
SER
112
n
112
SER
112
A
GLY
113
n
113
GLY
113
A
PHE
114
n
114
PHE
114
A
GLY
115
n
115
GLY
115
A
ARG
116
n
116
ARG
116
A
GLY
117
n
117
GLY
117
A
MET
118
n
118
MET
118
A
GLU
119
n
119
GLU
119
A
GLU
120
n
120
GLU
120
A
GLY
121
n
121
GLY
121
A
LEU
122
n
122
LEU
122
A
PRO
123
n
123
PRO
123
A
ASN
124
n
124
ASN
124
A
ALA
125
n
125
ALA
125
A
LYS
126
n
126
LYS
126
A
LEU
127
n
127
LEU
127
A
ASP
128
n
128
ASP
128
A
SER
129
n
129
SER
129
A
VAL
130
n
130
VAL
130
A
VAL
131
n
131
VAL
131
A
GLN
132
n
132
GLN
132
A
VAL
133
n
133
VAL
133
A
GLY
134
n
134
GLY
134
A
ALA
135
n
135
ALA
135
A
GLY
136
n
136
GLY
136
A
GLY
137
n
137
GLY
137
A
VAL
138
n
138
VAL
138
A
GLY
139
n
139
GLY
139
A
ASN
140
n
140
ASN
140
A
ALA
141
n
141
ALA
141
A
VAL
142
n
142
VAL
142
A
ALA
143
n
143
ALA
143
A
TYR
144
n
144
TYR
144
A
ALA
145
n
145
ALA
145
A
LEU
146
n
146
LEU
146
A
VAL
147
n
147
VAL
147
A
THR
148
n
148
THR
148
A
HIS
149
n
149
HIS
149
A
GLY
150
n
150
GLY
150
A
VAL
151
n
151
VAL
151
A
GLN
152
n
152
GLN
152
A
LYS
153
n
153
LYS
153
A
LEU
154
n
154
LEU
154
A
GLN
155
n
155
GLN
155
A
VAL
156
n
156
VAL
156
A
ALA
157
n
157
ALA
157
A
ASP
158
n
158
ASP
158
A
LEU
159
n
159
LEU
159
A
ASP
160
n
160
ASP
160
A
THR
161
n
161
THR
161
A
SER
162
n
162
SER
162
A
ARG
163
n
163
ARG
163
A
ALA
164
n
164
ALA
164
A
GLN
165
n
165
GLN
165
A
ALA
166
n
166
ALA
166
A
LEU
167
n
167
LEU
167
A
ALA
168
n
168
ALA
168
A
ASP
169
n
169
ASP
169
A
VAL
170
n
170
VAL
170
A
ILE
171
n
171
ILE
171
A
ASN
172
n
172
ASN
172
A
ASN
173
n
173
ASN
173
A
ALA
174
n
174
ALA
174
A
VAL
175
n
175
VAL
175
A
GLY
176
n
176
GLY
176
A
ARG
177
n
177
ARG
177
A
GLU
178
n
178
GLU
178
A
ALA
179
n
179
ALA
179
A
VAL
180
n
180
VAL
180
A
VAL
181
n
181
VAL
181
A
GLY
182
n
182
GLY
182
A
VAL
183
n
183
VAL
183
A
ASP
184
n
184
ASP
184
A
ALA
185
n
185
ALA
185
A
ARG
186
n
186
ARG
186
A
GLY
187
n
187
GLY
187
A
ILE
188
n
188
ILE
188
A
GLU
189
n
189
GLU
189
A
ASP
190
n
190
ASP
190
A
VAL
191
n
191
VAL
191
A
ILE
192
n
192
ILE
192
A
ALA
193
n
193
ALA
193
A
ALA
194
n
194
ALA
194
A
ALA
195
n
195
ALA
195
A
ASP
196
n
196
ASP
196
A
GLY
197
n
197
GLY
197
A
VAL
198
n
198
VAL
198
A
VAL
199
n
199
VAL
199
A
ASN
200
n
200
ASN
200
A
ALA
201
n
201
ALA
201
A
THR
202
n
202
THR
202
A
PRO
203
n
203
PRO
203
A
MET
204
n
204
MET
204
A
GLY
205
n
205
GLY
205
A
MET
206
n
206
MET
206
A
PRO
207
n
207
PRO
207
A
ALA
208
n
208
ALA
208
A
HIS
209
n
209
HIS
209
A
PRO
210
n
210
PRO
210
A
GLY
211
n
211
GLY
211
A
THR
212
n
212
THR
212
A
ALA
213
n
213
ALA
213
A
PHE
214
n
214
PHE
214
A
ASP
215
n
215
ASP
215
A
VAL
216
n
216
VAL
216
A
SER
217
n
217
SER
217
A
CYS
218
n
218
CYS
218
A
LEU
219
n
219
LEU
219
A
THR
220
n
220
THR
220
A
LYS
221
n
221
LYS
221
A
ASP
222
n
222
ASP
222
A
HIS
223
n
223
HIS
223
A
TRP
224
n
224
TRP
224
A
VAL
225
n
225
VAL
225
A
GLY
226
n
226
GLY
226
A
ASP
227
n
227
ASP
227
A
VAL
228
n
228
VAL
228
A
VAL
229
n
229
VAL
229
A
TYR
230
n
230
TYR
230
A
MET
231
n
231
MET
231
A
PRO
232
n
232
PRO
232
A
ILE
233
n
233
ILE
233
A
GLU
234
n
234
GLU
234
A
THR
235
n
235
THR
235
A
GLU
236
n
236
GLU
236
A
LEU
237
n
237
LEU
237
A
LEU
238
n
238
LEU
238
A
LYS
239
n
239
LYS
239
A
ALA
240
n
240
ALA
240
A
ALA
241
n
241
ALA
241
A
ARG
242
n
242
ARG
242
A
ALA
243
n
243
ALA
243
A
LEU
244
n
244
LEU
244
A
GLY
245
n
245
GLY
245
A
CYS
246
n
246
CYS
246
A
GLU
247
n
247
GLU
247
A
THR
248
n
248
THR
248
A
LEU
249
n
249
LEU
249
A
ASP
250
n
250
ASP
250
A
GLY
251
n
251
GLY
251
A
THR
252
n
252
THR
252
A
ARG
253
n
253
ARG
253
A
MET
254
n
254
MET
254
A
ALA
255
n
255
ALA
255
A
ILE
256
n
256
ILE
256
A
HIS
257
n
257
HIS
257
A
GLN
258
n
258
GLN
258
A
ALA
259
n
259
ALA
259
A
VAL
260
n
260
VAL
260
A
ASP
261
n
261
ASP
261
A
ALA
262
n
262
ALA
262
A
PHE
263
n
263
PHE
263
A
ARG
264
n
264
ARG
264
A
LEU
265
n
265
LEU
265
A
PHE
266
n
266
PHE
266
A
THR
267
n
267
THR
267
A
GLY
268
n
268
GLY
268
A
LEU
269
n
269
LEU
269
A
GLU
270
n
270
GLU
270
A
PRO
271
n
271
PRO
271
A
ASP
272
n
272
ASP
272
A
VAL
273
n
273
VAL
273
A
SER
274
n
274
SER
274
A
ARG
275
n
275
ARG
275
A
MET
276
n
276
MET
276
A
ARG
277
n
277
ARG
277
A
GLU
278
n
278
GLU
278
A
THR
279
n
279
THR
279
A
PHE
280
n
280
PHE
280
A
LEU
281
n
281
LEU
281
A
SER
282
n
282
SER
282
A
LEU
283
n
283
LEU
283
A
author_and_software_defined_assembly
PISA
2
dimeric
4720
-23
22120
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
2_555
-x,y,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
A
O
ILE
39
A
O
ILE
39
A
N
LEU
9
A
N
LEU
9
A
N
GLY
8
A
N
GLY
8
A
O
ASN
67
A
O
ASN
67
A
N
LEU
66
A
N
LEU
66
A
O
VAL
96
A
O
VAL
96
A
N
VAL
97
A
N
VAL
97
A
O
THR
105
A
O
THR
105
A
O
GLY
106
A
O
GLY
106
A
N
GLU
82
A
N
GLU
82
A
O
VAL
181
A
O
VAL
181
A
N
VAL
156
A
N
VAL
156
A
O
GLN
155
A
O
GLN
155
A
N
GLN
132
A
N
GLN
132
A
N
VAL
133
A
N
VAL
133
A
O
VAL
199
A
O
VAL
199
A
N
VAL
198
A
N
VAL
198
A
O
GLY
226
A
O
GLY
226
A
N
VAL
225
A
N
VAL
225
A
O
LEU
249
A
O
LEU
249
1
A
MET
1
A
MET
1
1
Y
1
A
A
OD2
OG1
ASP
THR
99
101
2.13
B
1_555
2_556
1
A
PRO
71
-97.21
31.60
17.48
0.159
0.13796
0.13838
0.13838
1.16
30.00
1758
92402
88244
95.5
random
1
THROUGHOUT
0
0
MOLECULAR REPLACEMENT
3jyo
1.16
30.00
369
2501
57
0
2075
0.400
1.20
8491
92.5
0.300
1.25
8565
93.2
0.236
1.31
8668
93.8
0.183
1.38
8661
94.2
0.163
1.46
8769
95.3
0.136
1.57
8859
96.0
0.102
1.73
8935
96.6
0.081
1.98
8957
96.8
0.071
2.50
9099
98.3
0.077
30.00
9240
98.5
17.48
1.16
30.00
3JYP
92402
88244
0
0
0.081
0.081
1
26.87
6.3
95.9
0.400
1.16
1.20
4.19
8491
0.400
1
4.3
92.5
refinement
REFMAC
5.0
data reduction
DENZO
data scaling
SCALEPACK
Quinate dehydrogenase from Corynebacterium glutamicum in complex with quinate and NADH
1
N
N
2
N
N
3
N
N
4
N
N
A
ARG
18
A
ARG
18
HELX_P
A
GLN
30
A
GLN
30
1
1
13
A
ASP
50
A
ASP
50
HELX_P
A
LEU
61
A
LEU
61
1
2
12
A
VAL
76
A
VAL
76
HELX_P
A
LEU
80
A
LEU
80
5
3
5
A
SER
84
A
SER
84
HELX_P
A
GLY
91
A
GLY
91
1
4
8
A
ASN
108
A
ASN
108
HELX_P
A
LEU
122
A
LEU
122
1
5
15
A
GLY
136
A
GLY
136
HELX_P
A
HIS
149
A
HIS
149
1
6
14
A
ASP
160
A
ASP
160
HELX_P
A
GLY
176
A
GLY
176
1
7
17
A
GLY
187
A
GLY
187
HELX_P
A
ALA
195
A
ALA
195
1
8
9
A
ASP
215
A
ASP
215
HELX_P
A
LEU
219
A
LEU
219
5
9
5
A
THR
235
A
THR
235
HELX_P
A
LEU
244
A
LEU
244
1
10
10
A
GLY
251
A
GLY
251
HELX_P
A
GLY
268
A
GLY
268
1
11
18
A
ASP
272
A
ASP
272
HELX_P
A
LEU
283
A
LEU
283
1
12
12
OXIDOREDUCTASE
quinate dehyrogenase, ternary complex, quinate, NADH, Amino-acid biosynthesis, Aromatic amino acid biosynthesis, NAD, Oxidoreductase
A
HIS
70
A
HIS
70
1
A
PRO
71
A
PRO
71
0.99
A
MET
231
A
MET
231
1
A
PRO
232
A
PRO
232
1.13
AROE_CORGL
UNP
1
1
Q9X5C9
MNDSILLGLIGQGLDLSRTPAMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALYLGFNGLNITHPYKQAVLPLL
DEVSEQATQLGAVNTVVIDATGHTTGHNTDVSGFGRGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD
TSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVYMPIETELLKA
ARALGCETLDGTRMAIHQAVDAFRLFTGLEPDVSRMRETFLSL
1
283
3JYP
1
283
Q9X5C9
A
1
1
283
6
6
parallel
parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
parallel
A
THR
34
A
THR
34
A
ASP
40
A
ASP
40
A
ILE
5
A
ILE
5
A
GLY
11
A
GLY
11
A
GLY
65
A
GLY
65
A
ILE
68
A
ILE
68
A
THR
95
A
THR
95
A
ILE
98
A
ILE
98
A
THR
104
A
THR
104
A
HIS
107
A
HIS
107
A
GLU
82
A
GLU
82
A
VAL
83
A
VAL
83
A
VAL
180
A
VAL
180
A
GLY
182
A
GLY
182
A
LYS
153
A
LYS
153
A
ALA
157
A
ALA
157
A
SER
129
A
SER
129
A
VAL
133
A
VAL
133
A
GLY
197
A
GLY
197
A
ASN
200
A
ASN
200
A
TRP
224
A
TRP
224
A
ASP
227
A
ASP
227
A
THR
248
A
THR
248
A
LEU
249
A
LEU
249
BINDING SITE FOR RESIDUE NAD A 377
A
NAD
377
Software
23
BINDING SITE FOR RESIDUE QIC A 284
A
QIC
284
Software
12
A
VAL
133
A
VAL
133
23
1_555
A
GLY
136
A
GLY
136
23
1_555
A
GLY
137
A
GLY
137
23
1_555
A
VAL
138
A
VAL
138
23
1_555
A
ASP
158
A
ASP
158
23
1_555
A
LEU
159
A
LEU
159
23
1_555
A
ARG
163
A
ARG
163
23
1_555
A
THR
202
A
THR
202
23
1_555
A
PRO
203
A
PRO
203
23
1_555
A
MET
206
A
MET
206
23
1_555
A
ALA
213
A
ALA
213
23
1_555
A
VAL
228
A
VAL
228
23
1_555
A
VAL
229
A
VAL
229
23
1_555
A
TYR
230
A
TYR
230
23
1_555
A
GLY
251
A
GLY
251
23
1_555
A
MET
254
A
MET
254
23
1_555
A
ALA
255
A
ALA
255
23
1_555
A
HOH
301
D
HOH
23
1_555
A
HOH
387
D
HOH
23
1_555
A
HOH
472
D
HOH
23
1_555
A
HOH
481
D
HOH
23
1_555
A
HOH
614
D
HOH
23
1_555
A
HOH
628
D
HOH
23
1_555
A
SER
17
A
SER
17
12
1_555
A
THR
19
A
THR
19
12
1_555
A
ASN
67
A
ASN
67
12
1_555
A
THR
69
A
THR
69
12
1_555
A
LYS
73
A
LYS
73
12
1_555
A
ASN
94
A
ASN
94
12
1_555
A
ASP
110
A
ASP
110
12
1_555
A
GLN
258
A
GLN
258
12
1_555
A
HOH
332
D
HOH
12
1_555
A
HOH
364
D
HOH
12
1_555
A
HOH
418
D
HOH
12
1_555
A
HOH
434
D
HOH
12
1_555
5
C 1 2 1